Homology
BLAST of Lsi10G008720 vs. ExPASy Swiss-Prot
Match:
P53919 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NAF1 PE=1 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 7.1e-12
Identity = 137/502 (27.29%), Postives = 211/502 (42.03%), Query Frame = 0
Query: 118 DLNSIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVE-SEGTSSTSTSSSSSSGRSSD 177
DLN + + + L+ DGG E + D+ +D E S G S S+ S S SG SD
Sbjct: 16 DLNVELPKDDVDLGLLGDGG------NERKTDEPVADAERSTGLGSGSSESESDSGSDSD 75
Query: 178 SEIDEEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADD 237
S+ S SS S+D + D + E ED E G+ + +DEDE+ S
Sbjct: 76 SD-------SGSSGSEDDSADQDVEGED-------------EGGDAIENEDEDEDPSP-- 135
Query: 238 MVAWDSDGEDLDGEDEEAGVGGGPITSKNEL--KVLPPVPRVHASLQPHHQMLPVGIVLS 297
GPI SKNE+ + +P +P + + + P+G++ S
Sbjct: 136 ---------------------SGPILSKNEILEETVPELPEDY-EISEKTIITPIGVLKS 195
Query: 298 IIGNQVIVEGV--EKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRY-----NS 357
N +I+ + L EGSI + E R+ +G++ E+FGP++NP+Y ++ N
Sbjct: 196 AFENNIIIHATMSGEKRVLKEGSIFCL-EDRTLIGMLTEVFGPLQNPFYRIKLPDSKKNL 255
Query: 358 ESEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELE 417
E+ + G V A ++ + KG DAS DEE+ +++ EFSDDEKE
Sbjct: 256 FDELK--VRLGEKAFIVTPDAHWIDTFELKRNKGTDASNGYDEELPEEEQEFSDDEKEAL 315
Query: 418 FKKMQRLAK-RAMNDNQQINGNRNNVR-KKKNNAKAGKFGQCT---FETANVPNE---SR 477
FKKM++ + R DN+++ + +NV+ K+ KA + ++N P +
Sbjct: 316 FKKMKKQQRQRKKRDNRKLANDSDNVKVKRARQPKANSLPKLVPPLGMSSNAPMQHGYKS 375
Query: 478 KFYGQRTPEQATIPEGRKFDQPTP------QQAKMDMVQQSPNQNQQTGPPLAPFVYHGG 537
+ + +++ R P P QQ + N PP +PF
Sbjct: 376 RNARENIKRESSATSNRNGSSPVPITQHHQQQFSANNYPFPQQPNGMPYPPYSPFPQPTN 435
Query: 538 CPNP----SVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNG 588
P A + T S PP YN N P + F Q P P G
Sbjct: 436 FQYPPPPFGQATPAQFSNTVPYGSLPPAYN-------NMSPPTQQSFMPMTQSQPPLPYG 457
BLAST of Lsi10G008720 vs. ExPASy Swiss-Prot
Match:
Q52KK4 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10116 GN=Naf1 PE=1 SV=1)
HSP 1 Score: 54.3 bits (129), Expect = 9.9e-06
Identity = 103/358 (28.77%), Postives = 152/358 (42.46%), Query Frame = 0
Query: 149 DDGESDVESEGTSSTSTSS---------SSSSGRSSDSEIDEEEENSSSSSSDDSNCDDE 208
D GE+ G +T+ + S SS SDSE D + +SSSSSS S
Sbjct: 54 DAGENPPPPSGPCATAPDAAEPLPELQDSDSSDSDSDSETDSDSSSSSSSSSSSS----- 113
Query: 209 EEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAWDSDG-EDLDGEDEEAGVGG 268
+S + SDG ED+ E E
Sbjct: 114 --------------------------------SSCGSLPPVLSDGEEDVQVEKENKNF-- 173
Query: 269 GPITSKNELKV--LPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSI 328
P+ +K+EL + LP V + +L + P+G V SII VI+E + P+NE ++
Sbjct: 174 -PLKTKDELLLNELPSVEELTVTLPEDIALKPLGKVSSIIEQLVIIESMTNIPPVNEDTV 233
Query: 329 LWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFAGYVL 388
++ ++ R G + EIFGPV +P+Y +R+NS + GI + F + +F Y+
Sbjct: 234 IFKSD-RQAAGKIFEIFGPVAHPFYVLRFNSSEHIESKGIKIKDTMYFAPSMKDFTQYIF 293
Query: 389 NNKDLYKKGYDASGVNDEEVSDDD-EFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNV 448
K +G DAS ND+E + +FSDDEKE E K+ ++ QI G +
Sbjct: 294 TEKLKQDRGSDASWKNDQEPPPEALDFSDDEKEKEAKQRKK---------SQIQGRKK-- 353
Query: 449 RKKKNNAKAGKFGQCTFE-TANVPNESRKFYGQRTPEQATIPEGR----KFDQPTPQQ 485
K + N FG+ AN +E K Y R + P GR +P PQQ
Sbjct: 354 LKSELNESGEDFGEVHQNWNANSSSEHSKGYHNREFTRG-FPRGRYSRGSHGRPPPQQ 358
BLAST of Lsi10G008720 vs. ExPASy Swiss-Prot
Match:
Q3UMQ8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 GN=Naf1 PE=1 SV=2)
HSP 1 Score: 51.2 bits (121), Expect = 8.4e-05
Identity = 101/360 (28.06%), Postives = 147/360 (40.83%), Query Frame = 0
Query: 167 SSSSSGRSSDSEIDEEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVD 226
+S SS SDSE D + +SSSSSS S+
Sbjct: 109 ASDSSDSDSDSETDSDSSSSSSSSSSSSS------------------------------- 168
Query: 227 DEDEEASADDMVAWDSDGEDLDGEDEEAGVGGGPITSKNELKV--LPPVPRVHASLQPHH 286
+ V D D ED E E P+ +K+EL + LP V + L
Sbjct: 169 ----SCVSFPPVLSDGD-EDFQLEKENKNF---PLKTKDELLLNELPSVEELTVILPEDI 228
Query: 287 QMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVR 346
+ P+G V SII VI+E V P+NE ++++ ++ R G + EIFGPV +P+Y +R
Sbjct: 229 ALKPLGKVSSIIEQLVIIESVTNIPPVNEDTVIFKSD-RQAAGKIFEIFGPVAHPFYVLR 288
Query: 347 YNSESEV-PHGISGGTHVSF---VLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDD-EFS 406
+NS + GI + F + +F Y+ K +G DAS ND+E + +FS
Sbjct: 289 FNSSDHIESKGIKINDTMYFAPSMKDFTQYIFTEKLKQDRGSDASWKNDQEPPPEVLDFS 348
Query: 407 DDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRK 466
DDEKE E K+ ++ QI G + K + N FG+ E N + S
Sbjct: 349 DDEKEKEAKQRKK---------SQIQGRKK--LKSELNESGEDFGE-VHENWNAYSSSEH 408
Query: 467 FYGQRTPE-QATIPEG----RKFDQPTPQQ-------AKMDMVQQSPNQNQQTGPPLAPF 508
G E G R +P PQQ A + + +P + P PF
Sbjct: 409 SKGYHHREFSRGFARGRYSRRSHGRPPPQQYYNSDHMASQESLGFTPQRQDNPVMPHYPF 416
BLAST of Lsi10G008720 vs. ExPASy Swiss-Prot
Match:
Q96HR8 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN=NAF1 PE=1 SV=2)
HSP 1 Score: 48.1 bits (113), Expect = 7.1e-04
Identity = 108/414 (26.09%), Postives = 167/414 (40.34%), Query Frame = 0
Query: 155 VESEGTSSTSTSSSSSSGRSSDSEIDEEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREI 214
V S G + + + S SDS+ D E ++ SSSSS S+ +
Sbjct: 96 VTSPGAAEPARAPDSLETSDSDSDSDSETDSDSSSSSSSSSSSSSSSSSSCISL------ 155
Query: 215 GELEEGEIRDVDDEDEEASADDMVAWDSDGEDLDGEDEEAGVGGGPITSKNELKV--LPP 274
V D D +DL E E P+ +K+EL + LP
Sbjct: 156 ---------------------PPVLSDGD-DDLQIEKENKNF---PLKTKDELLLNELPS 215
Query: 275 VPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEI 334
V + L ++ P+G+V SII VI+E + P+NE ++++ ++ R G + EI
Sbjct: 216 VEELTIILPEDIELKPLGMVSSIIEQLVIIESMTNLPPVNEETVIFKSD-RQAAGKIFEI 275
Query: 335 FGPVKNPYYSVRYNSESEV-PHGISGGTHVSF---VLEFAGYVLNNKDLYKKGYDASGVN 394
FGPV +P+Y +R+NS + GI + F + +F Y+ K KG DAS N
Sbjct: 276 FGPVAHPFYVLRFNSSDHIESKGIKIKETMYFAPSMKDFTQYIFTEKLKQDKGSDASWKN 335
Query: 395 DEEVSDDD-EFSDDEKELEF-----------KKMQRLAKRAMNDNQQINGNRNNVRKKKN 454
D+E + +FSDDEKE E KK++ D +++ N N
Sbjct: 336 DQEPPPEALDFSDDEKEKEAKQRKKSQIQGRKKLKSEFNEPGEDFTEVHQNWNAHSSASE 395
Query: 455 NAKAGKFGQCT--FETANVPNE------SRKFYGQR---TPEQATIPEGRKFDQPTPQQA 514
+AK + + T F A P + FY + E + P R+ + PQ
Sbjct: 396 HAKGYRNREFTRGFSRARYPRSCHGRPPPQHFYNSEHMVSQETSGFPSQRQNNPIMPQYP 455
Query: 515 KMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSFPPTYNP 540
V N + PP P + G P++A +N + S PP P
Sbjct: 456 FPLPVFDMHNFPLRPPPPPPPPPVNMGWATPNMAAHPLLN---LPYSLPPPPPP 474
BLAST of Lsi10G008720 vs. ExPASy TrEMBL
Match:
A0A5A7TE26 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00720 PE=3 SV=1)
HSP 1 Score: 1062.0 bits (2745), Expect = 1.7e-306
Identity = 562/658 (85.41%), Postives = 601/658 (91.34%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEF+PNSN AS PDGLLHASSKLKNSEPL+SFDSKAIDY F DSFLDYDSLNDW +ELT
Sbjct: 1 MVEFSPNSNAASDPDGLLHASSKLKNSEPLDSFDSKAIDYPFVDSFLDYDSLNDWFNELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQTLLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEACS STDLN
Sbjct: 61 SPNMVDTQTLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACSNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGESDVESEGTSS STSSSSSSG SSD+E++
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSSVSTSSSSSSGGSSDNEVE 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEE+SSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD DDEDEEASADDMVAW
Sbjct: 181 EEEESSSSSSSGDY---DDEEEEYIVEAEGKREIGELEEGEIRDADDEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEAG GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHHKMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GI GGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRL
Sbjct: 361 GIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKLQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQIN N+NN RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGVMSSF
Sbjct: 481 GRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPSVAERCFMNGTGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NT
Sbjct: 541 PPAYNPYFTPAMNGIRPPEIPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPILNT 600
Query: 601 FAGASYPQGFVGP-SALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
FAGA+YPQGFVGP SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FAGAAYPQGFVGPLSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. ExPASy TrEMBL
Match:
A0A1S3CRN9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103503966 PE=3 SV=1)
HSP 1 Score: 1062.0 bits (2745), Expect = 1.7e-306
Identity = 562/658 (85.41%), Postives = 601/658 (91.34%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEF+PNSN AS PDGLLHASSKLKNSEPL+SFDSKAIDY F DSFLDYDSLNDW +ELT
Sbjct: 1 MVEFSPNSNAASDPDGLLHASSKLKNSEPLDSFDSKAIDYPFVDSFLDYDSLNDWFNELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQTLLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEACS STDLN
Sbjct: 61 SPNMVDTQTLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACSNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGESDVESEGTSS STSSSSSSG SSD+E++
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSSVSTSSSSSSGGSSDNEVE 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEE+SSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD DDEDEEASADDMVAW
Sbjct: 181 EEEESSSSSSSGDY---DDEEEEYIVEAEGKREIGELEEGEIRDADDEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEAG GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHHKMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GI GGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRL
Sbjct: 361 GIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKLQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQIN N+NN RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGVMSSF
Sbjct: 481 GRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPSVAERCFMNGTGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NT
Sbjct: 541 PPAYNPYFTPAMNGIRPPEIPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPILNT 600
Query: 601 FAGASYPQGFVGP-SALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
FAGA+YPQGFVGP SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FAGAAYPQGFVGPLSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. ExPASy TrEMBL
Match:
A0A5D3CIV9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00340 PE=3 SV=1)
HSP 1 Score: 1056.2 bits (2730), Expect = 9.1e-305
Identity = 564/658 (85.71%), Postives = 597/658 (90.73%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPNSNT SAPDGLLH SSKLKNS PL+SFDSKAIDYSF DSFLDYDS NDW DELT
Sbjct: 1 MVEFAPNSNTTSAPDGLLHTSSKLKNSGPLDSFDSKAIDYSFVDSFLDYDSFNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQ LLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEAC+ STDLN
Sbjct: 61 SPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGE+DVESEGTSS STSSSSSSG SSD+E+D
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSSSSGGSSDNEVD 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEENSSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD D EDEEASADDMVAW
Sbjct: 181 EEEENSSSSSSSDY---DDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEA GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRL
Sbjct: 361 GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKEMQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQINGN+NN RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGVMSSF
Sbjct: 481 GRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFMNETGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NT
Sbjct: 541 PPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPMLNT 600
Query: 601 FAGASYPQGFVG-PSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
F GA+YPQGFVG SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. ExPASy TrEMBL
Match:
A0A5D3CIV9 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00340 PE=3 SV=1)
HSP 1 Score: 743.4 bits (1918), Expect = 1.3e-210
Identity = 378/427 (88.52%), Postives = 397/427 (92.97%), Query Frame = 0
Query: 651 VLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGL 710
VLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGL
Sbjct: 273 VLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGL 332
Query: 711 VDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVN 770
VDEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVN
Sbjct: 333 VDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVN 392
Query: 771 DEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTF 830
DEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+NN RKKKNNAKA KF Q TF
Sbjct: 393 DEEVSDDGEFSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTF 452
Query: 831 ETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFV 890
E ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFV
Sbjct: 453 ENANVPDESKKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFV 512
Query: 891 YHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNG 950
Y GGCP+ SVAEQCF+N TGVMSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNG
Sbjct: 513 YQGGCPDLSVAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNG 572
Query: 951 LPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQ 1010
LPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG SALPN LT+V AQG+ GGLQ
Sbjct: 573 LPMNGMPWLLQNPAQQMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQ 632
Query: 1011 FGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGGPHFRGR 1070
FGQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+ GRGGPHFRGR
Sbjct: 633 FGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSH--GRGGPHFRGR 692
Query: 1071 RGGRQTR 1077
RGG+Q+R
Sbjct: 693 RGGQQSR 697
HSP 2 Score: 1056.2 bits (2730), Expect = 9.1e-305
Identity = 564/658 (85.71%), Postives = 597/658 (90.73%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPNSNT SAPDGLLH SSKLKNS PL+SFDSKAIDYSF DSFLDYDS NDW DELT
Sbjct: 1 MVEFAPNSNTTSAPDGLLHTSSKLKNSGPLDSFDSKAIDYSFVDSFLDYDSFNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQ LLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEAC+ STDLN
Sbjct: 61 SPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGE+DVESEGTSS STSSSSSSG SSD+E+D
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSSSSGGSSDNEVD 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEENSSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD D EDEEASADDMVAW
Sbjct: 181 EEEENSSSSSSSDY---DDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEA GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRL
Sbjct: 361 GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKEMQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQINGN+NN RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGVMSSF
Sbjct: 481 GRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFMNETGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NT
Sbjct: 541 PPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPMLNT 600
Query: 601 FAGASYPQGFVG-PSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
F GA+YPQGFVG SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. ExPASy TrEMBL
Match:
A0A1S4E2D7 (H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN=LOC103498379 PE=3 SV=1)
HSP 1 Score: 743.4 bits (1918), Expect = 1.3e-210
Identity = 378/427 (88.52%), Postives = 397/427 (92.97%), Query Frame = 0
Query: 651 VLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGL 710
VLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGL
Sbjct: 273 VLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGL 332
Query: 711 VDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVN 770
VDEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVN
Sbjct: 333 VDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVN 392
Query: 771 DEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTF 830
DEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+NN RKKKNNAKA KF Q TF
Sbjct: 393 DEEVSDDGEFSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTF 452
Query: 831 ETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFV 890
E ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFV
Sbjct: 453 ENANVPDESKKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFV 512
Query: 891 YHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNG 950
Y GGCP+ SVAEQCF+N TGVMSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNG
Sbjct: 513 YQGGCPDLSVAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNG 572
Query: 951 LPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQ 1010
LPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG SALPN LT+V AQG+ GGLQ
Sbjct: 573 LPMNGMPWLLQNPAQQMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQ 632
Query: 1011 FGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGGPHFRGR 1070
FGQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+ GRGGPHFRGR
Sbjct: 633 FGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSH--GRGGPHFRGR 692
Query: 1071 RGGRQTR 1077
RGG+Q+R
Sbjct: 693 RGGQQSR 697
HSP 2 Score: 1054.3 bits (2725), Expect = 3.5e-304
Identity = 565/663 (85.22%), Postives = 596/663 (89.89%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPNSNT SAPDGLLH SSKLKNSEPL+SFDSKAIDYSF DSFLDYDS NDW DELT
Sbjct: 1 MVEFAPNSNTTSAPDGLLHTSSKLKNSEPLDSFDSKAIDYSFVDSFLDYDSFNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQ LLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEAC+ STDLN
Sbjct: 61 SPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGE+DVESEGTSS STSSSSSSG SSD+E+D
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSSSSGGSSDNEVD 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
+EEENSSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD D EDEEASADDMVAW
Sbjct: 181 KEEENSSSSSSSDY---DDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED------------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLP 300
D+DGEDLDGED EEA GGPITSKNELKVLPPVP+VHA+LQPHHQMLP
Sbjct: 241 DNDGEDLDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLP 300
Query: 301 VGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360
VG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE
Sbjct: 301 VGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360
Query: 361 SEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFK 420
SEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK
Sbjct: 361 SEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFK 420
Query: 421 KMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQ 480
KMQRLAKRAMNDNQQINGN+NN RKKKNNAKA KF Q T E ANV +ES+KFYGQRTPEQ
Sbjct: 421 KMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTVENANVSDESKKFYGQRTPEQ 480
Query: 481 ATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTG 540
ATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCPN SVAEQCF+N TG
Sbjct: 481 ATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYEGGCPNLSVAEQCFMNETG 540
Query: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQM 600
VMSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQM
Sbjct: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQQMPQM 600
Query: 601 PMPNTFAGASYPQGFVG-PSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNS 651
PM NTF GA+YPQGFVG SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNS
Sbjct: 601 PMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNS 660
BLAST of Lsi10G008720 vs. NCBI nr
Match:
XP_008466591.1 (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo] >KAA0041662.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo var. makuwa] >TYJ97966.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1062.0 bits (2745), Expect = 3.4e-306
Identity = 562/658 (85.41%), Postives = 601/658 (91.34%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEF+PNSN AS PDGLLHASSKLKNSEPL+SFDSKAIDY F DSFLDYDSLNDW +ELT
Sbjct: 1 MVEFSPNSNAASDPDGLLHASSKLKNSEPLDSFDSKAIDYPFVDSFLDYDSLNDWFNELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQTLLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEACS STDLN
Sbjct: 61 SPNMVDTQTLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACSNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGESDVESEGTSS STSSSSSSG SSD+E++
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEVDDGESDVESEGTSSVSTSSSSSSGGSSDNEVE 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEE+SSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD DDEDEEASADDMVAW
Sbjct: 181 EEEESSSSSSSGDY---DDEEEEYIVEAEGKREIGELEEGEIRDADDEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEAG GGPITSKNELKVLPPVP+VHA+LQPHH+MLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEAGAEGGPITSKNELKVLPPVPQVHATLQPHHKMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEG+EKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGIEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GI GGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKK+QRL
Sbjct: 361 GIRGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKLQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQIN N+NN RKKKNNAKAGKFGQ TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINANKNNGRKKKNNAKAGKFGQRTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GR FD P PQQAKMDMVQ SPNQNQQTGP L PFVYHGGCPNPSVAE+CF+NGTGVMSSF
Sbjct: 481 GRNFDYPIPQQAKMDMVQPSPNQNQQTGPHLPPFVYHGGCPNPSVAERCFMNGTGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PP YNPYFTPAMNGIRP E+PFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMP+ NT
Sbjct: 541 PPAYNPYFTPAMNGIRPPEIPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPILNT 600
Query: 601 FAGASYPQGFVGP-SALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
FAGA+YPQGFVGP SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FAGAAYPQGFVGPLSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. NCBI nr
Match:
XP_016902388.1 (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo] >TYK11128.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1056.2 bits (2730), Expect = 1.9e-304
Identity = 564/658 (85.71%), Postives = 597/658 (90.73%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPNSNT SAPDGLLH SSKLKNS PL+SFDSKAIDYSF DSFLDYDS NDW DELT
Sbjct: 1 MVEFAPNSNTTSAPDGLLHTSSKLKNSGPLDSFDSKAIDYSFVDSFLDYDSFNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQ LLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEAC+ STDLN
Sbjct: 61 SPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGE+DVESEGTSS STSSSSSSG SSD+E+D
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSSSSGGSSDNEVD 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
EEEENSSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD D EDEEASADDMVAW
Sbjct: 181 EEEENSSSSSSSDY---DDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED-------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVL 300
D+DGEDLDG+D EEA GGPITSKNELKVLPPVP+VHA+LQPHHQMLPVG+VL
Sbjct: 241 DNDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLPVGVVL 300
Query: 301 SIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPH 360
S++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVP
Sbjct: 301 SMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPL 360
Query: 361 GISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRL 420
GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK+MQRL
Sbjct: 361 GISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKEMQRL 420
Query: 421 AKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPE 480
AKRAMNDNQQINGN+NN RKKKNNAKA KF Q TFE ANVP+ES+KFYGQRTPEQATI E
Sbjct: 421 AKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTFENANVPDESKKFYGQRTPEQATIFE 480
Query: 481 GRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSF 540
GRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCP+ SVAEQCF+N TGVMSSF
Sbjct: 481 GRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYQGGCPDLSVAEQCFMNETGVMSSF 540
Query: 541 PPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNT 600
PPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQMPM NT
Sbjct: 541 PPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQQMPQMPMLNT 600
Query: 601 FAGASYPQGFVG-PSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPP 651
F GA+YPQGFVG SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNSHPP
Sbjct: 601 FVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPP 655
BLAST of Lsi10G008720 vs. NCBI nr
Match:
XP_016902388.1 (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo] >TYK11128.1 H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 743.4 bits (1918), Expect = 2.7e-210
Identity = 378/427 (88.52%), Postives = 397/427 (92.97%), Query Frame = 0
Query: 651 VLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGL 710
VLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGL
Sbjct: 273 VLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGL 332
Query: 711 VDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVN 770
VDEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVN
Sbjct: 333 VDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVN 392
Query: 771 DEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTF 830
DEEVSDD EFSDDEKELEFK+MQRLAKRAMNDNQQINGN+NN RKKKNNAKA KF Q TF
Sbjct: 393 DEEVSDDGEFSDDEKELEFKEMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTF 452
Query: 831 ETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFV 890
E ANVP+ES+KFYGQRTPEQATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFV
Sbjct: 453 ENANVPDESKKFYGQRTPEQATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFV 512
Query: 891 YHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNG 950
Y GGCP+ SVAEQCF+N TGVMSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNG
Sbjct: 513 YQGGCPDLSVAEQCFMNETGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNG 572
Query: 951 LPMNGMPWLLQNPAQQVPQMPMPNTFAGASYPQGFVG-PSALPNPLTSVEAQGMQPGGLQ 1010
LPMNGMPWLLQNPAQQ+PQMPM NTF GA+YPQGFVG SALPN LT+V AQG+ GGLQ
Sbjct: 573 LPMNGMPWLLQNPAQQMPQMPMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQ 632
Query: 1011 FGQNQNNLQPATQQFNPPNSHPPVTFPGNTAPQQFNQNSSSNQGRKSYGRGRGGPHFRGR 1070
FGQNQNNLQPA QQFNPPNSHPP TF GN APQQFNQNSSS QGRKS+ GRGGPHFRGR
Sbjct: 633 FGQNQNNLQPAAQQFNPPNSHPPGTFSGNRAPQQFNQNSSSKQGRKSH--GRGGPHFRGR 692
Query: 1071 RGGRQTR 1077
RGG+Q+R
Sbjct: 693 RGGQQSR 697
HSP 2 Score: 1054.3 bits (2725), Expect = 7.2e-304
Identity = 565/663 (85.22%), Postives = 596/663 (89.89%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPNSNT SAPDGLLH SSKLKNSEPL+SFDSKAIDYSF DSFLDYDS NDW DELT
Sbjct: 1 MVEFAPNSNTTSAPDGLLHTSSKLKNSEPLDSFDSKAIDYSFVDSFLDYDSFNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTDLN 120
SPNM TQ LLPE DAHL+QSVEKSVPVID VQ VRSEDF+ E+QASGEAC+ STDLN
Sbjct: 61 SPNMVDTQKLLPEGDAHLSQSVEKSVPVIDGVQSNFVRSEDFKIEMQASGEACNNSTDLN 120
Query: 121 SIIEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEID 180
SIIEEGMSKVSLVLDGGCT+ VELES+ DDGE+DVESEGTSS STSSSSSSG SSD+E+D
Sbjct: 121 SIIEEGMSKVSLVLDGGCTSKVELESEADDGENDVESEGTSSISTSSSSSSGGSSDNEVD 180
Query: 181 EEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW 240
+EEENSSSSSS D D+EE+E +V+AEG+REIGELEEGEIRD D EDEEASADDMVAW
Sbjct: 181 KEEENSSSSSSSDY---DDEEEEYIVEAEGKREIGELEEGEIRDADGEDEEASADDMVAW 240
Query: 241 DSDGEDLDGED------------EEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLP 300
D+DGEDLDGED EEA GGPITSKNELKVLPPVP+VHA+LQPHHQMLP
Sbjct: 241 DNDGEDLDGEDLDGDDEDLDGEEEEARAEGGPITSKNELKVLPPVPQVHATLQPHHQMLP 300
Query: 301 VGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360
VG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE
Sbjct: 301 VGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSE 360
Query: 361 SEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFK 420
SEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFK
Sbjct: 361 SEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFK 420
Query: 421 KMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQ 480
KMQRLAKRAMNDNQQINGN+NN RKKKNNAKA KF Q T E ANV +ES+KFYGQRTPEQ
Sbjct: 421 KMQRLAKRAMNDNQQINGNKNNGRKKKNNAKARKFVQHTVENANVSDESKKFYGQRTPEQ 480
Query: 481 ATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTG 540
ATI EGRKFD PTPQQAKMDMVQ SPNQNQQTGPPLAPFVY GGCPN SVAEQCF+N TG
Sbjct: 481 ATIFEGRKFDHPTPQQAKMDMVQPSPNQNQQTGPPLAPFVYEGGCPNLSVAEQCFMNETG 540
Query: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQM 600
VMSSFPPTYNPYFTPAMNGIRPAEMPFQF QQQNPFFPNGLPMNGMPWLLQNPAQQ+PQM
Sbjct: 541 VMSSFPPTYNPYFTPAMNGIRPAEMPFQFPQQQNPFFPNGLPMNGMPWLLQNPAQQMPQM 600
Query: 601 PMPNTFAGASYPQGFVG-PSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNS 651
PM NTF GA+YPQGFVG SALPN LT+VGAQG+ GGLQFGQNQNNLQPA QQFNPPNS
Sbjct: 601 PMLNTFVGAAYPQGFVGSSSALPNSLTTVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNS 660
BLAST of Lsi10G008720 vs. NCBI nr
Match:
XP_031736889.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 [Cucumis sativus])
HSP 1 Score: 1043.5 bits (2697), Expect = 1.3e-300
Identity = 563/699 (80.54%), Postives = 600/699 (85.84%), Query Frame = 0
Query: 1 MVEFAPNSNTASAPDGLLHASSKLKNSEPLNSFDSKAIDYSFADSFLDYDSLNDWIDELT 60
MVEFAPN+NTASAPDGLLH SSKLKNSEPL+SFDSKAIDYS DSFLDYDSLNDW DELT
Sbjct: 1 MVEFAPNTNTASAPDGLLHDSSKLKNSEPLDSFDSKAIDYSLVDSFLDYDSLNDWFDELT 60
Query: 61 SPNMAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQAS----------- 120
SPNM TQTLLPE DAHL+QSV+KSVPVID VQ VRSEDF+ E++ S
Sbjct: 61 SPNMVDTQTLLPEGDAHLSQSVQKSVPVIDGVQSNFVRSEDFKIEMKTSGEACSNSTDFN 120
Query: 121 ---------------GEACSKSTDLNSIIEEGMSKVSLVLDGGCTANVELESQEDDGESD 180
GEACS STD NSIIEEGMSKVSLVLDGGC + VELES+ DDGE D
Sbjct: 121 SITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGD 180
Query: 181 VESEGTSSTSTSSSSSSGRSSDSEIDEEEENSSSSSSDDSNCDDEEEKEDMVKAEGQREI 240
VESEGTSS STSSSSSSG SSD+E+DEEEE+SSSS+S + CDDEEEKE++V+AEG+REI
Sbjct: 181 VESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTS--AGCDDEEEKENIVEAEGKREI 240
Query: 241 GELEEGEIRDVDDEDEEASADDMVAWDSDG-------EDLDGEDEEAGVGGGPITSKNEL 300
GELEEGEIRD DDEDEEA ADDMVAWD+DG EDLDGE+EEAG GGPITSKNEL
Sbjct: 241 GELEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNEL 300
Query: 301 KVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLG 360
KVLPPVP+VHA+LQPHHQMLPVG+VLS++GNQVIVEGVEKHNPL+EGSILWITEARSPLG
Sbjct: 301 KVLPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLG 360
Query: 361 LVDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVSFVLEFAGYVLNNKDLYKKGYDASGV 420
LVDEIFGPVKNPYYSVRYNSESEVP GISGGTHVSFVLEFA YVLNNKDLYKKGYDASGV
Sbjct: 361 LVDEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGV 420
Query: 421 NDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQQINGNRNNVRKKKNNAKAGKFGQCT 480
NDEEVSDD EFSDDEKELEFKKMQRLAKRAMNDNQQIN N+NN RKKKNNAKA KFG+ T
Sbjct: 421 NDEEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERT 480
Query: 481 FETANVPNESRKFYGQRTPEQATIPEGRKFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPF 540
FE ANVP+E +KFYGQ TPEQA I EGRKFD PTP QAKMDMV+ SPNQNQQTGPPLAPF
Sbjct: 481 FENANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPF 540
Query: 541 VYHGGCPNPSVAEQCFINGTGVMSSFPPTYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPN 600
VYHGGCPNPSVAEQCF+NGTG+MSSFPPTYNP FTPAMNGIRPAEMPFQFQQQQNPFFPN
Sbjct: 541 VYHGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPN 600
Query: 601 GLPMNGMPWLLQNPAQ---------------QVPQMPMPNTFAGASYPQGFVGP-SALPN 651
GLPMNGMPWLLQNPAQ Q+PQMPM NTFAGA+YPQGFVGP SALPN
Sbjct: 601 GLPMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPN 660
BLAST of Lsi10G008720 vs. NCBI nr
Match:
XP_038901527.1 (H/ACA ribonucleoprotein complex non-core subunit NAF1 [Benincasa hispida])
HSP 1 Score: 946.4 bits (2445), Expect = 2.1e-271
Identity = 518/601 (86.19%), Postives = 537/601 (89.35%), Query Frame = 0
Query: 64 MAHTQTLLPEADAHLNQSVEKSVPVIDAVQPIDVRSEDFEPEVQASGEAC-SKSTDLNSI 123
M QTLLPEADAHLNQSVEK VP+ID VQ VRSEDF+PEVQASGEAC SKS +LNSI
Sbjct: 1 MVDAQTLLPEADAHLNQSVEKPVPIIDGVQSNVVRSEDFKPEVQASGEACGSKSANLNSI 60
Query: 124 IEEGMSKVSLVLDGGCTANVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEIDEE 183
IEEGMSKVSLVLDGGC ANV+LESQED+GESDVESE TSSTSTSSSSSSGRSSD+EIDEE
Sbjct: 61 IEEGMSKVSLVLDGGCIANVKLESQEDEGESDVESESTSSTSTSSSSSSGRSSDNEIDEE 120
Query: 184 EENSSSSSSDDSNCDDEEEKEDMVKAEGQREIGELEEGEIRDVDDEDEEASADDMVAW-- 243
EENSSSSSS DSNCDDEEE E MVKAEGQREIGELEEGEIRD+ DEDEEASADDMVAW
Sbjct: 121 EENSSSSSSGDSNCDDEEE-EYMVKAEGQREIGELEEGEIRDIADEDEEASADDMVAWDD 180
Query: 244 -----DSDGEDLDGEDEEAGVGGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSI 303
D DGE+LDGEDEEAGV GGPI SKNELKVLPPVP+VHA+LQPHHQMLPVG+VLSI
Sbjct: 181 DAEDVDDDGENLDGEDEEAGVEGGPIRSKNELKVLPPVPQVHATLQPHHQMLPVGVVLSI 240
Query: 304 IGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPHGI 363
IGNQVIVEG EKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYS+RYNSESEVP GI
Sbjct: 241 IGNQVIVEGGEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSIRYNSESEVPLGI 300
Query: 364 SGGTHVSFVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAK 423
SGGTHVS VLEFA YVLNNKDLYKKGYDASGVNDEEVSDD EFSDDEKELEFKKMQ+LAK
Sbjct: 301 SGGTHVSSVLEFADYVLNNKDLYKKGYDASGVNDEEVSDDGEFSDDEKELEFKKMQKLAK 360
Query: 424 RAMNDNQQINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGR 483
RAMNDNQQINGNRNNVRKKKNNAKA KFGQCTFETANVP+ GQRTPEQATI EG
Sbjct: 361 RAMNDNQQINGNRNNVRKKKNNAKARKFGQCTFETANVPD------GQRTPEQATISEGW 420
Query: 484 KFDQPTPQQAKMDMVQQSPNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSFPP 543
KFDQPTPQQ KMDMVQ SPNQNQQTGP LAP VYHGGCPNPS A CFINGTG+M SF P
Sbjct: 421 KFDQPTPQQGKMDMVQPSPNQNQQTGPSLAPVVYHGGCPNPSAARPCFINGTGIMPSFQP 480
Query: 544 TYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNG-LPMNGMPWLLQNPAQQVPQMPMPNTF 603
+YNPYFTPAMNGIRPAEMPFQFQQQQNPFFPN LPMNGMPW LQNP QQVPQM M NTF
Sbjct: 481 SYNPYFTPAMNGIRPAEMPFQFQQQQNPFFPNSLLPMNGMPWQLQNPVQQVPQMAMANTF 540
Query: 604 AGASYPQGFVGPS-ALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPPVLP 655
AGA+YP GFVGPS ALPNPLTSVG QG+Q GGLQFGQNQNNLQPATQQFN N +PPV
Sbjct: 541 AGAAYPPGFVGPSTALPNPLTSVGPQGIQSGGLQFGQNQNNLQPATQQFNLSNMNPPVTF 594
BLAST of Lsi10G008720 vs. TAIR 10
Match:
AT1G03530.1 (nuclear assembly factor 1 )
HSP 1 Score: 254.6 bits (649), Expect = 3.5e-67
Identity = 239/612 (39.05%), Postives = 303/612 (49.51%), Query Frame = 0
Query: 83 EKSVPVIDAVQPIDVRSEDFEPEVQASGEACSKSTD--LNSIIEEGMSKVSLVLDGGCTA 142
E S + +P+ V E+ K TD L IE G+ KVSL +D
Sbjct: 176 ENSRSMEGETEPVVVSDASVACPTMDLDESGLKKTDEGLACSIEVGLEKVSLAVDD---- 235
Query: 143 NVELESQEDDGESDVESEGTSSTSTSSSSSSGRSSDSEIDEEEENSSSSSSDDSNCDDEE 202
+ +S E GE D +E S TS+SS+SSS SS EEE S SD EE
Sbjct: 236 --DEKSDEAKGEMD-SAESESETSSSSASSSDSSS-----SEEEESDEDESDKEENKKEE 295
Query: 203 EKEDMVKAEGQREIGELEEGEIR---------DVDDEDEEASADD--------MVAWDSD 262
+ E MV + GELEEGEI D++DED++ DD MVAW +D
Sbjct: 296 KFEHMVVGKEDDLAGELEEGEIENLDEENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSND 355
Query: 263 GEDLDGEDEEAGV-GGGPITSKNELKVLPPVPRVHASLQPHHQMLPVGIVLSIIGNQVIV 322
ED++ G+ PI SKNELK LPPVP V +L+PHH LPVG+VLS++ QVIV
Sbjct: 356 ------EDDDLGLQTKEPIRSKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQVIV 415
Query: 323 EGVEKHNPLNEGSILWITEARSPLGLVDEIFGPVKNPYYSVRYNSESEVPHGISGGTHVS 382
EG+EKH+PL EGSILWITE R+PLGLVDEIFGPVK PYY VR+NSESEVP G+ GT VS
Sbjct: 416 EGMEKHSPLTEGSILWITEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTPVS 475
Query: 383 FVLEFAGYVLNNKDLYKKGYDASGVNDEEVSDDDEFSDDEKELEFKKMQRLAKRAMNDNQ 442
FV +FA ++LN K+L KKGYDASG NDEE+ D+ EFSDDEKE E+++MQ+L KR M +Q
Sbjct: 476 FVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDEKEAEYRRMQKLEKRGMMSDQ 535
Query: 443 QINGNRNNVRKKKNNAKAGKFGQCTFETANVPNESRKFYGQRTPEQATIPEGRKFDQPTP 502
+ RN KKK N G+ T++ E K G +++ R Q
Sbjct: 536 KTGNTRN---KKKKNRDPGR------PTSSYSGEWTKNQG-----SSSLSSNRSDPQMGG 595
Query: 503 QQAKMDMVQQS-----PNQNQQTGPPLAPFVYHGGCPNPSVAEQCFINGTGVMSSFPPTY 562
+ +MD + P NQQ L P G P +A Q N +M
Sbjct: 596 PRPQMDGFPPNNAAWRPQSNQQNPYQLPPIPNQMGMQIPFMAMQ---NQNQMM------- 655
Query: 563 NPYFTPAMNGIRPAEMPFQFQQQQNPFFPNGLPMNGMPWLLQNPAQQVPQMPMPNTFAGA 622
F P NG +MP FFP PW P M N F
Sbjct: 656 ---FQPQFNG---GQMPMPGGPGGLNFFPG---QASAPW---------PAMVGQNCF--- 715
Query: 623 SYPQGFVGPSALPNPLTSVGAQGMQPGGLQFGQNQNNLQPATQQFNPPNSHPPVLPPVPR 670
Q +G PL + + M GLQ Q+ + Q NP PP P
Sbjct: 716 -NQQFGMGRGIQQQPLPNELSFNMFSQGLQMHPPQSQMHRPQSQMNPQFQMPPQFQ--PH 721
BLAST of Lsi10G008720 vs. TAIR 10
Match:
AT4G03380.1 (BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G03530.1); Has 29 Blast hits to 29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0
Query: 287 LPVGIVLSIIGNQVIVEGVEKHNPLNEGSILWITEARSPLGLVD-EIFGPVKNPYYSVRY 346
+P G+V + ++V H PLN G++L ITE + PLG VD FG V NP Y V+
Sbjct: 9 VPAGVVNMV--QYLVVTNKGDHKPLNVGTMLLITETKVPLGRVDGYFFGSVTNPDYIVKV 68
Query: 347 -NSESEVPHGISGGTHVSFVLEFA 369
+SE ++P GG SF ++ +
Sbjct: 69 EDSEMQIPEVRQGGPSGSFGVDLS 90
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P53919 | 7.1e-12 | 27.29 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Saccharomyces cerevisia... | [more] |
Q52KK4 | 9.9e-06 | 28.77 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Rattus norvegicus OX=10... | [more] |
Q3UMQ8 | 8.4e-05 | 28.06 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Mus musculus OX=10090 G... | [more] |
Q96HR8 | 7.1e-04 | 26.09 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Homo sapiens OX=9606 GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TE26 | 1.7e-306 | 85.41 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw... | [more] |
A0A1S3CRN9 | 1.7e-306 | 85.41 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3CIV9 | 9.1e-305 | 85.71 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw... | [more] |
A0A5D3CIV9 | 1.3e-210 | 88.52 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo var. makuw... | [more] |
A0A1S4E2D7 | 1.3e-210 | 88.52 | H/ACA ribonucleoprotein complex non-core subunit NAF1 OS=Cucumis melo OX=3656 GN... | [more] |
Pages
Match Name | E-value | Identity | Description | |
XP_008466591.1 | 3.4e-306 | 85.41 | PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1... | [more] |
XP_016902388.1 | 1.9e-304 | 85.71 | PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1... | [more] |
XP_016902388.1 | 2.7e-210 | 88.52 | PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1... | [more] |
XP_031736889.1 | 1.3e-300 | 80.54 | H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1 [Cucumis sativu... | [more] |
XP_038901527.1 | 2.1e-271 | 86.19 | H/ACA ribonucleoprotein complex non-core subunit NAF1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT1G03530.1 | 3.5e-67 | 39.05 | nuclear assembly factor 1 | [more] |
AT4G03380.1 | 1.2e-06 | 38.10 | BEST Arabidopsis thaliana protein match is: nuclear assembly factor 1 (TAIR:AT1G... | [more] |