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Lsi10G008670 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGTCATCGTTTTGAAGCGCTCGGGTCTCTATTTCTTGCTTCCGTTTCGCCGTATCAGCGTCATTGATCTCTCTTTCTCTCTGTAGGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACCGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGCCGGTAGGTTTCATCTCCCGATCTCATTTTTATGAATTTAGATCATCCGCTTCGACTTATTTCATTTTTGGATTTGTTCAATCTTCTATGTTCTCTGGATTTTTTGGAGTTTCATTTCGAAATGGAATTGTGGTTATATTTTTTTTCCCCAAGTTCTGTTTTTAGGTCTGGCTCAATATTTTCAAGGTATGCATTGATCTAAGGATCTTGAAAGGTGCGAATTTTTTTAGTTTTTGGAATGCATTTTACGTAATTAGACAACCCAGATTTTCTATGAGGAGATTTCACTATTATTCTTCGATAACGAAGGTTGTTGTCTTGTGTCTATAATCGAAATGGGTATGAAGCATACTGAACTCTGATTTTAACCTCAATCTGGCAACAGAAAATTTCCAAGATATGGAAATTTTGGACTTGTATTTTTCTTGCATATTGTTACATCATTTGCTTCAACTGGGGACTGCTGCTATAGCTTTAACGGTGAAGTTTAAACAATGAAACATTGGTAGATTTATCACAATGAAAATGCAGGCATTGCATTATTACTTGCACTCCACCACTTCGTTGAGTGTTTGATGCAGATCGTTGTTATGTTTTAAAAGTACTATAATTTGCAAAAGTTATAATGGGGTTTTTCTTAGCCCTTTCTCTAGTGGGGTTTTGGTGGGCTTGTTTTGTTATATGCTCCCGTGTACTTTCATTTTTTTTTTTTGTCAATGAAGGCAGTTGTTAATGTATTAATAAAAATTGCTAAAAATTAGTTTGCTAATTTGAAAGATATATGTCAACACTACACATGAATACCTGCCATGTAGTAAAGATACAACAGTTTCGAAAGAATAACCTGCATACTGAATGGAACATAGAAAACCACCTGTGCATAAGACAGTCAACTGATTAGTAAAATTACTCATACTGGGTTATATAATTTTCTTTAAAATTTAACTTTCAGGGTCTTATCTAAAAAAACAAAAAATAACTTTCAGCGTTTGTTTACAAGACTACATTCTACACATGCATTTGGACTCGACTTCTTGTATTCCCTTTTGTAATGTTTGTTGTTGGAGAAAGATGAACGAATAATCAAACATTAAAGGAAAAGAAAGGAAACATCAAAAGATGAACAAATGAGCTTTTTTCTTTCAAGTATGACCCTCTTTGTTGATATTTGCAGACCACCATGGACCACCGAAGATTAACTGCTGGCAAGATCCAATGAGCCCATCTAAATGGAAGGAAGAGCATGTGAGACTTATTTTTCATATGAAACTACTAGCTTCTTTTTCTTTTTGTTTTTTTCAATTATTTTATTAATTTTTTGGTCTTTTTTCTTTTTTGTTCTTCCTATTTGCTCTCATCAAGTAGGAGGATTTAAGAATGAGATGTTAACCTTTCTAGACTTTCTATCAGAATCTCTTATTTATAATCAACTCAACAAAATACTTGATTTTGTTGTTTAAGAGTTCTTTTTGAACTCCATATTTTATGTAGTTTCATCAGTCACTTGTAGTGTTGTATTAGATTAGTTTCATTAAAGCTATAATTTGGAATTTATGGGTTCAATTTAGAGCTAAATGCAGCTGTTTGCCTCACAGTCACTGTATTACCTGTTCTCTTTGCTTTGCATAGGCTTTGAAGTCGAAAATTCTACTCCCTTAAATTTATTAGTTTTGCTTGAAACTTATGAGTCTTAGGTAGAATGCCCTGTTCTCCTTAGGTGTTCTTCTAGTTGGTGAAGAATTGATAAACAATGACTGCCCTCTTCTCTTAAGTGTTCTTCTTGACGTGGAGAATAAATAATTAATAAACAATGGCCTAATTATCATACTTGTGCCGTCTTTAATATTTAGTTGTTTCTTCTGGTTTCGTTCAAACATTATTTACTAATGAACTAATTGAACTTGTTCTGACATTTGCAGTTCGTGATTGTCTCTCTATCGGGATGGGGTCTACTCATCTTTGGAGGGTACAAATTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGGTACTTCTGCACTTATTGTCTGTGCACTTTTTACACTTAAAACCACTTGCAATTACAGGTGATGTTAAATGAAATAATATTTGGCAGTCATGGATCGGTTTTGAGTTGTTTACAAGATTAACTTCTGAGAACAATTTACTTATGCCTCTTATTTGTGAGGAGGGAATGACACCTTAAAAGTGTTAGCTTTTGTGCGTTCCTTGGTTTTACCTTCATTCTAAGTTTATTAACTTGACAAATTCTACATCAGCTTGTGATATGAAATGGAAATAGGTAAATGTTGACCTCTTCTGGAATATTCTGGAATACATGAAAACATAATACGAGATCTGGAATTTATGTTTGTTCAGAGAAATTAGATTATGATATTTTGAGGCTCCTTTTGTTGCCTTCTTGGTGACCTGGCGTGATTATATGAGGGGAACAGGGGAGTAGTATAATCGTTACCTCGGGGCTCGGCTGGAGAATGAAAAACATTTACCTGATTTCTCTCTTTTAAGAACGTTTCATGGATCATTTGGATCACAATTATACATGGAGTATTTGAAAATTGTAACAGGATGTAGCTGGCATATCATAATCAAACTTGCACATGTATTCTTTTTCACTGCGAGTTTTTGTTTCTCTCCTAATTTATTGCGTTTTGTTTTCAGAAACTTGTGGAAGCATCACAATGAGCTGAGCTATGGACATTTTCCGATTGTTCTGAAGTACTCCCCGTAATAATGTATTTCTTGGACCTCATGTGTCTGCAGATTTCATTTCAATCTGGAATTGTTTCTCAGACTAGTATATGATCGATCCTATCTTGTAGCTTTTTCTTGACATTTTGGTTATTTCATGAACCGAAGTCCTACATCTAATAATACGATTTTACCATCACTTAAGCCCCCAACAAACTCATTCATTGAATTTGAAGGGAGGGCATTTGTGGTTCGGAGTTTGTGATTGAACAAAGCATTTTTGAGTAAATCAGTCAATTGATTTCTTTGGTGTGTGATTCAGTTAACGCTTGATCACTTGGTTTGA ATGCTTGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACCGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGCCGACCACCATGGACCACCGAAGATTAACTGCTGGCAAGATCCAATGAGCCCATCTAAATGGAAGGAAGAGCATTTCGTGATTGTCTCTCTATCGGGATGGGGTCTACTCATCTTTGGAGGGTACAAATTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGTTAACGCTTGATCACTTGGTTTGA ATGCTTGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAACTCGAGTCTCCTCTCCTCAGTCAACCGCCACCCTTATTCACAGGCGCGGTCTCGCTGGCGCTGCCGACCACCATGGACCACCGAAGATTAACTGCTGGCAAGATCCAATGAGCCCATCTAAATGGAAGGAAGAGCATTTCGTGATTGTCTCTCTATCGGGATGGGGTCTACTCATCTTTGGAGGGTACAAATTCTTTACCAGGGGCAAAGGAAAGAAGGATGAGTTAACGCTTGATCACTTGGTTTGA MLGRKSESMATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKINCWQDPMSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTRGKGKKDELTLDHLV Homology
BLAST of Lsi10G008670 vs. ExPASy TrEMBL
Match: A0A6J1CEY6 (uncharacterized protein LOC111011068 OS=Momordica charantia OX=3673 GN=LOC111011068 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.6e-43 Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Lsi10G008670 vs. ExPASy TrEMBL
Match: A0A5A7U364 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001630 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.9e-42 Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of Lsi10G008670 vs. ExPASy TrEMBL
Match: A0A1S3BJS2 (uncharacterized protein LOC103490467 OS=Cucumis melo OX=3656 GN=LOC103490467 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41 Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Lsi10G008670 vs. ExPASy TrEMBL
Match: A0A6J1I3K1 (uncharacterized protein LOC111469597 OS=Cucurbita maxima OX=3661 GN=LOC111469597 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 8.1e-41 Identity = 83/90 (92.22%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Lsi10G008670 vs. ExPASy TrEMBL
Match: A0A6J1FYP0 (uncharacterized protein LOC111448907 OS=Cucurbita moschata OX=3662 GN=LOC111448907 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40 Identity = 83/90 (92.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Lsi10G008670 vs. NCBI nr
Match: KAG6570850.1 (QWRF motif-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43 Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of Lsi10G008670 vs. NCBI nr
Match: XP_038900519.1 (uncharacterized protein LOC120087716 [Benincasa hispida]) HSP 1 Score: 183.0 bits (463), Expect = 1.4e-42 Identity = 87/90 (96.67%), Postives = 88/90 (97.78%), Query Frame = 0
BLAST of Lsi10G008670 vs. NCBI nr
Match: XP_022140380.1 (uncharacterized protein LOC111011068 [Momordica charantia]) HSP 1 Score: 183.0 bits (463), Expect = 1.4e-42 Identity = 86/90 (95.56%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Lsi10G008670 vs. NCBI nr
Match: KAA0047889.1 (uncharacterized protein E6C27_scaffold133G001630 [Cucumis melo var. makuwa]) HSP 1 Score: 181.4 bits (459), Expect = 4.0e-42 Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of Lsi10G008670 vs. NCBI nr
Match: KAG7034933.1 (hypothetical protein SDJN02_01726, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.1 bits (453), Expect = 2.0e-41 Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Lsi10G008670 vs. TAIR 10
Match: AT2G20820.1 (unknown protein; Has 44 Blast hits to 44 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.5 bits (223), Expect = 8.6e-19 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of Lsi10G008670 vs. TAIR 10
Match: AT2G20820.2 (unknown protein; Has 36 Blast hits to 36 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 26/61 (42.62%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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