Lsi10G007760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G007760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMYB-related transcription factor
Locationchr10: 10599107 .. 10600769 (-)
RNA-Seq ExpressionLsi10G007760
SyntenyLsi10G007760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCTTGTTGTGAGAAACAACACACCAACAAGGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATTAATTACATCCAAATCCATGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCCGCCGGTAGGACTAAAGAGATTCAAACTTCTAACTTTTTTCTCTATTCTAGTAATATTTACTAATTATATAATCTAATATTTATATAGGGTTGCTTCGATGTGGCAAGAGTTGTCGGTTACGATGGATCAATTACCTTCGTCCAGACCTCAAGAGAGGGAATTTCACTACTGAGGAAGATGAAATCATCATTAATCTCCATAGTCTACTTGGTAACAAGTAATTATCAATCTCTTCTTTCTAACTCTACCTTCTATAATAAATATTTTTTTTTTTTTTTTTACTTTAGTTGCACTTTCAACGCGTTTTAGTAAGAGATTTGTGTTTGATAGATAATCTGGATTTTATTTGTTAAGAAATTGATAATTGAAGATTTGAATAGAAAACATTAAAAAAAAAAATAGAGAATCGAGACAGAGATTTACGTGGTTTACTATTAGTGTATTAACTACGTTCATGGGTAGAAGGGGAGAACGGTTTTATTGGAGAGAAATTTTCAGATGGTGGAGCTAGAGTATGAGTAGGGTTAGAAAATTTATATACCACACTCATCTAAACTCTAGGCTCAACATCGTAAACTGTACAAATAATATAAATACGAATACAACTTAGGTTTCGGGGTTATTGTCGTGTTTTTTAGAATTCTTTTCAGATTAATAACATTTTTTTTTATGTTTTTAGTGTATACAAGTTTTGAATTTGAGATTTTAAAATGTTAAATTATATTAAAATAGCAAATAACATTAGCTAATAAATATAGTGTATTCATGTTGTAGACTCAAATTATTTTTCTTTTAAATTAAAAGACGTATTATGCAATGTATTGAAACAAAATTATAATTATACAATAAATTTTAACTTAAATGTTCATAAATTAATTAATATCAGTTGATATTCAACTTAATATTAAATAGGTAGTTATATCTAGTTTTTTGGAAATATATTATCAAATACATTTTGAGGAATTATTTAAATTACAATCTAGTTTTTAAATTTGTTTTTGTTTTTGTTGTTTTGTTTTTTTTTTTTTTTTACAATCTAGTTTCTAAATCTGTTACCAAATACGTATCTGAAACTATGAAATAATGAGCCGTACTATCTAATTTGATGAGATTTTATAATATGACTGATAGGTGGTCTTTAATTGCGGCACGGTTACCTGGGAGGACGGATAACGAGATAAAGAACTACTGGAACACACACATTAAACGCAAACTCTACAACCGGGGAATCGACCCTCAAACGCATCGTCCACTAGTCAATAACAGTAGCACCGGCGACATGGACGGACGAAGGGAAGATTCAAACAGTAACAGTAGCAACAGTTGTTTGACGACGGAGGTAGAAGAAAAGCCACCATTGAATCTCAATCTAGAGCTCTCCATTGGCCGTCATCCCCATAACCCTATTACCAAAAACCTCAATGGAAAAGGGGAGGAGGCTCCTGTTTTACTCCAATTTTGTGCACCACAAACAGAATATTTAGAAACTGAAACTTCCTCCTCCACCCCTCATCTCTTTAGATATTACACTTCAACCACTTCT

mRNA sequence

TCTCCTTGTTGTGAGAAACAACACACCAACAAGGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATTAATTACATCCAAATCCATGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCCGCCGGTAGGACTAAAGAGATTCAAACTTCTAACTTTTTTCTCTATTCTAGGTTGCTTCGATGTGGCAAGAGTTGTCGGTTACGATGGATCAATTACCTTCGTCCAGACCTCAAGAGAGGGAATTTCACTACTGAGGAAGATGAAATCATCATTAATCTCCATAGTCTACTTGGTAACAAGACGGATAACGAGATAAAGAACTACTGGAACACACACATTAAACGCAAACTCTACAACCGGGGAATCGACCCTCAAACGCATCGTCCACTAGTCAATAACAGTAGCACCGGCGACATGGACGGACGAAGGGAAGATTCAAACAGTAACAGTAGCAACAGTTGTTTGACGACGGAGGTAGAAGAAAAGCCACCATTGAATCTCAATCTAGAGCTCTCCATTGGCCGTCATCCCCATAACCCTATTACCAAAAACCTCAATGGAAAAGGGGAGGAGGCTCCTGTTTTACTCCAATTTTGTGCACCACAAACAGAATATTTAGAAACTGAAACTTCCTCCTCCACCCCTCATCTCTTTAGATATTACACTTCAACCACTTCT

Coding sequence (CDS)

TCTCCTTGTTGTGAGAAACAACACACCAACAAGGGTGCATGGACCAAAGAAGAAGACCAACGTCTTATTAATTACATCCAAATCCATGGCGATGGTTGTTGGAGATCTCTCCCTAAAGCCGCCGGTAGGACTAAAGAGATTCAAACTTCTAACTTTTTTCTCTATTCTAGGTTGCTTCGATGTGGCAAGAGTTGTCGGTTACGATGGATCAATTACCTTCGTCCAGACCTCAAGAGAGGGAATTTCACTACTGAGGAAGATGAAATCATCATTAATCTCCATAGTCTACTTGGTAACAAGACGGATAACGAGATAAAGAACTACTGGAACACACACATTAAACGCAAACTCTACAACCGGGGAATCGACCCTCAAACGCATCGTCCACTAGTCAATAACAGTAGCACCGGCGACATGGACGGACGAAGGGAAGATTCAAACAGTAACAGTAGCAACAGTTGTTTGACGACGGAGGTAGAAGAAAAGCCACCATTGAATCTCAATCTAGAGCTCTCCATTGGCCGTCATCCCCATAACCCTATTACCAAAAACCTCAATGGAAAAGGGGAGGAGGCTCCTGTTTTACTCCAATTTTGTGCACCACAAACAGAATATTTAGAAACTGAAACTTCCTCCTCCACCCCTCATCTCTTTAGATATTACACTTCAACCACTTCT

Protein sequence

SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLRCGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNKTDNEIKNYWNTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNLELSIGRHPHNPITKNLNGKGEEAPVLLQFCAPQTEYLETETSSSTPHLFRYYTSTTS
Homology
BLAST of Lsi10G007760 vs. ExPASy Swiss-Prot
Match: P81395 (Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.9e-56
Identity = 119/180 (66.11%), Postives = 124/180 (68.89%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEEDQRLINYI+ HG+GCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EEDEIII LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHR------------PLVNNSSTGDMDGRREDSNSNSSNSCLTT 158
           NTHIKRKL +RGIDPQTHR            P VNNS    +D R   S SNS N C+ T
Sbjct: 124 NTHIKRKLVSRGIDPQTHRSLNSATTTATATPTVNNSC---LDFR--TSPSNSKNICMPT 163

BLAST of Lsi10G007760 vs. ExPASy Swiss-Prot
Match: P81393 (Myb-related protein 308 OS=Antirrhinum majus OX=4151 GN=MYB308 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 118/218 (54.13%), Postives = 134/218 (61.47%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEED RL+ YI+ HG+GCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EEDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEV---------- 180
           NTHI+RKL +RGIDP THR + + +++ D       SN+NS       +V          
Sbjct: 124 NTHIRRKLLSRGIDPTTHRSINDGTASQDQVTTISFSNANSKEEDTKHKVAVDIMIKEEN 183

Query: 181 ----EEKPPLNLNLELS------IGRHPHNPITKNLNG 188
               E  P LNL+L++S      I  H  N  T   NG
Sbjct: 184 SPVQERCPDLNLDLKISPPCQQQINYHQENLKTGGRNG 206

BLAST of Lsi10G007760 vs. ExPASy Swiss-Prot
Match: Q9SZP1 (Transcription repressor MYB4 OS=Arabidopsis thaliana OX=3702 GN=MYB4 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 107/169 (63.31%), Postives = 121/169 (71.60%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEED+RL+ YI+ HG+GCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EEDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRR-EDSNSNSSNSCLTT 158
           NTHI+RKL NRGIDP +HRP+  +S++ D    + E   SN+ N   T+
Sbjct: 124 NTHIRRKLINRGIDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTS 157

BLAST of Lsi10G007760 vs. ExPASy Swiss-Prot
Match: Q38851 (Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-52
Identity = 102/147 (69.39%), Postives = 111/147 (75.51%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEEDQRL++YI+ HG+GCWRSLPK+AG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT +ED+III LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSST 137
           NTHIKRKL + GIDPQTHR  +N S T
Sbjct: 124 NTHIKRKLLSHGIDPQTHRQ-INESKT 134

BLAST of Lsi10G007760 vs. ExPASy Swiss-Prot
Match: F1B281 (MYB-like transcription factor 4 OS=Petunia hybrida OX=4102 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51
Identity = 115/220 (52.27%), Postives = 139/220 (63.18%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEED+RLI YI+ HG+GCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDERLIAYIKAHGEGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT +EDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTEDEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSST----------GDMDGR------REDSNSNSSNS 180
           NTHI+RKL +RGIDP THR ++N  ST          G+ D +      + +      + 
Sbjct: 124 NTHIRRKLLSRGIDPTTHR-IMNEPSTQKVTTISFAAGNEDIKDQKISIKAEFEQIKDDE 183

Query: 181 CLTTEVEEKPPLNLNLELSIG----RHPHNPITKNLNGKG 190
            ++  ++E+ P +LNLEL I     +H    + ++  G G
Sbjct: 184 IISKPIKEQCP-DLNLELKISPPYQQHSDRALQQSTTGSG 206

BLAST of Lsi10G007760 vs. ExPASy TrEMBL
Match: A0A5A7VBL2 (Myb-related protein 330-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00240 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.0e-94
Identity = 184/242 (76.03%), Postives = 195/242 (80.58%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EED+IIINLH+LLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNN-SSTGDMDGRREDSNSN-SSNSCLTTEVEEKPPLNL 180
           NTHIKRKLY++GIDPQTHRPL NN SST D D RREDSNSN SSNSCLTTEVEE PPLNL
Sbjct: 124 NTHIKRKLYSQGIDPQTHRPLANNRSSTSDFDRRREDSNSNSSSNSCLTTEVEENPPLNL 183

Query: 181 NLELSIGRHPHNPITKNLNGKGEE---APVLLQFCAPQTEYLETETSSSTPHLFRYYTST 227
           NLELSIG HPHN ITKN N KG++   APVL +FC+PQTE LET+  SSTPH+FRYYT +
Sbjct: 184 NLELSIGLHPHNQITKNPNPKGDDHQKAPVLFKFCSPQTE-LETQHFSSTPHIFRYYTPS 229

BLAST of Lsi10G007760 vs. ExPASy TrEMBL
Match: A0A1S3CCV9 (myb-related protein 330-like OS=Cucumis melo OX=3656 GN=LOC103499594 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.0e-94
Identity = 184/242 (76.03%), Postives = 195/242 (80.58%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EED+IIINLH+LLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNN-SSTGDMDGRREDSNSN-SSNSCLTTEVEEKPPLNL 180
           NTHIKRKLY++GIDPQTHRPL NN SST D D RREDSNSN SSNSCLTTEVEE PPLNL
Sbjct: 124 NTHIKRKLYSQGIDPQTHRPLANNRSSTSDFDRRREDSNSNSSSNSCLTTEVEENPPLNL 183

Query: 181 NLELSIGRHPHNPITKNLNGKGEE---APVLLQFCAPQTEYLETETSSSTPHLFRYYTST 227
           NLELSIG HPHN ITKN N KG++   APVL +FC+PQTE LET+  SSTPH+FRYYT +
Sbjct: 184 NLELSIGLHPHNQITKNPNPKGDDHQKAPVLFKFCSPQTE-LETQHFSSTPHIFRYYTPS 229

BLAST of Lsi10G007760 vs. ExPASy TrEMBL
Match: A0A6J1F0H0 (transcription factor MYB8-like OS=Cucurbita moschata OX=3662 GN=LOC111438355 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.4e-74
Identity = 154/239 (64.44%), Postives = 171/239 (71.55%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYI++HG+G WRSLP AAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIKLHGEGGWRSLPNAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFTTEE+E+I+NLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTTEENELIVNLHSLLGNKWSLIAAKLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNL 180
           NTHIKRKLY++GIDP+THRPL+N  ST  +    EDSNSNSS SCLTTEVEE P LNLNL
Sbjct: 124 NTHIKRKLYSQGIDPRTHRPLINKGST-CLTREVEDSNSNSSGSCLTTEVEENPELNLNL 183

Query: 181 ELSIGRHPHNPITKNLNGKGEE---APVLLQFCAPQTEYLETETSSSTPHLFRYYTSTT 226
           ELSIG HPH P TK+  G G     +P+L       T+ +        PHLF  YTS+T
Sbjct: 184 ELSIGLHPHKPTTKSPGGGGGGSCFSPIL-----STTDRVRNGNFLLQPHLFTCYTSST 221

BLAST of Lsi10G007760 vs. ExPASy TrEMBL
Match: A0A6J1I9R2 (transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111472382 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.0e-72
Identity = 153/243 (62.96%), Postives = 169/243 (69.55%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYI++HGDG WRSLP AAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIKLHGDGGWRSLPTAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRP+LKRGNFTTEE+E+I+NLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPNLKRGNFTTEENELIVNLHSLLGNKWSQIAAKLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNL 180
           NTHIKRKLY++GIDP+THRPLVN  ST  +    EDSNSNSS SCLTTEVEE   LNLNL
Sbjct: 124 NTHIKRKLYSQGIDPRTHRPLVNKGST-CLTREVEDSNSNSSGSCLTTEVEENHELNLNL 183

Query: 181 ELSIGRHPHNPITKNLNGKGEE--------APVLLQFCAPQTEYLETETSSSTPHLFRYY 225
           ELSIG H HNP TK+  G G          +P+L       T+ +        PHLF  Y
Sbjct: 184 ELSIGLHSHNPTTKSPGGGGGGGGGGGSCFSPIL-----STTDRIRNGNFLLQPHLFTCY 225

BLAST of Lsi10G007760 vs. ExPASy TrEMBL
Match: A0A6J1DY65 (transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111025283 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64
Identity = 146/253 (57.71%), Postives = 166/253 (65.61%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK+HTNKGAWTKEEDQRLI+YIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKEHTNKGAWTKEEDQRLIDYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT +EDE+IINLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTDDEDELIINLHSLLGNKWSLIAARMPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDS--------NSNSSNSCLTTEVEE 180
           NTHIKRKLY RGIDPQTHRPL++  S      RR  S          +SS+SC+TTEVE+
Sbjct: 124 NTHIKRKLYARGIDPQTHRPLLHKPSAATDIHRRRPSAKPSATSAEDSSSSSCVTTEVED 183

Query: 181 ----KPPLNLNLELSIGRHPHNPITKNLNGKGEE-------APVLLQFCAPQTEYLETET 224
                PPLNL L +++   P +  T+  NG+ +        A VL QF    T   E   
Sbjct: 184 NNNNNPPLNLELSIAL---PCDNSTQPKNGQQDHPRPAAAGAAVLFQFGGGDT--AEETE 236

BLAST of Lsi10G007760 vs. NCBI nr
Match: XP_038901941.1 (myb-related protein 330-like [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 9.7e-102
Identity = 194/237 (81.86%), Postives = 199/237 (83.97%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCC+KQHTNKGAWTK+EDQRLINYIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCDKQHTNKGAWTKDEDQRLINYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNL 180
           NTHIKRKLYNRGIDPQTHRPLVN+SSTGD+D RREDSNSNSSNSCLTTEVEE PPLNLNL
Sbjct: 124 NTHIKRKLYNRGIDPQTHRPLVNSSSTGDIDRRREDSNSNSSNSCLTTEVEENPPLNLNL 183

Query: 181 ELSIGRHPHNPITKNLNGKGEEAPVLLQFCAPQTEYLETETSSSTPHLFRYYTSTTS 227
           ELSIG HPHNPITKN    G EAPV  QFCAPQTE LETETSSSTPHLFRYYTS+ S
Sbjct: 184 ELSIGLHPHNPITKNPKRNG-EAPVFFQFCAPQTE-LETETSSSTPHLFRYYTSSPS 223

BLAST of Lsi10G007760 vs. NCBI nr
Match: XP_004147356.2 (myb-related protein 330 [Cucumis sativus] >KAE8652001.1 hypothetical protein Csa_016956 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 1.1e-94
Identity = 186/243 (76.54%), Postives = 195/243 (80.25%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EED+IIINLH+LLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNN--SSTGDMDGRREDSNSN-SSNSCLTTEVEEKPPLN 180
           NTHIKRKLY+RGIDPQTHRPL NN  SSTGD D RREDSNSN SSNSCLTTEVEE PP N
Sbjct: 124 NTHIKRKLYSRGIDPQTHRPLANNSSSSTGDFDRRREDSNSNSSSNSCLTTEVEENPPSN 183

Query: 181 LNLELSIGRHPHNPITKNLNGKG---EEAPVLLQFCAPQTEYLETETSSSTPHLFRYYTS 227
           LNLELSIG HPHN ITKN N KG   +EAPVL +FC+PQTE LET+  SSTPH+FRYYT 
Sbjct: 184 LNLELSIGLHPHNQITKNTNPKGDDHQEAPVLFKFCSPQTE-LETQNFSSTPHMFRYYTP 230

BLAST of Lsi10G007760 vs. NCBI nr
Match: XP_008460839.1 (PREDICTED: myb-related protein 330-like [Cucumis melo] >KAA0063091.1 myb-related protein 330-like protein [Cucumis melo var. makuwa] >TYK02042.1 myb-related protein 330-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 1.7e-93
Identity = 184/242 (76.03%), Postives = 195/242 (80.58%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EED+IIINLH+LLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTAEEDQIIINLHTLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNN-SSTGDMDGRREDSNSN-SSNSCLTTEVEEKPPLNL 180
           NTHIKRKLY++GIDPQTHRPL NN SST D D RREDSNSN SSNSCLTTEVEE PPLNL
Sbjct: 124 NTHIKRKLYSQGIDPQTHRPLANNRSSTSDFDRRREDSNSNSSSNSCLTTEVEENPPLNL 183

Query: 181 NLELSIGRHPHNPITKNLNGKGEE---APVLLQFCAPQTEYLETETSSSTPHLFRYYTST 227
           NLELSIG HPHN ITKN N KG++   APVL +FC+PQTE LET+  SSTPH+FRYYT +
Sbjct: 184 NLELSIGLHPHNQITKNPNPKGDDHQKAPVLFKFCSPQTE-LETQHFSSTPHIFRYYTPS 229

BLAST of Lsi10G007760 vs. NCBI nr
Match: KAG6571317.1 (Myb-related protein 308, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-74
Identity = 153/236 (64.83%), Postives = 167/236 (70.76%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCC KQHTNKGAWTKEEDQRLINYI++HG+G WRSLP AAG               LLR
Sbjct: 4   SPCCAKQHTNKGAWTKEEDQRLINYIKLHGEGGWRSLPNAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFTTEE+E+I+NLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTTEENELIVNLHSLLGNKWSLIAAKLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNL 180
           NTHIKRKLY++GIDP+THRPLVN  ST  +    EDSNSNSS SCLTTEVEE P LNLNL
Sbjct: 124 NTHIKRKLYSQGIDPRTHRPLVNKGST-CLTREVEDSNSNSSGSCLTTEVEENPELNLNL 183

Query: 181 ELSIGRHPHNPITKNLNGKGEEAPVLLQFCAPQTEYLETETSSSTPHLFRYYTSTT 226
           ELSIG HPHNP TK+  G G             T+ +        PHLF  YTS+T
Sbjct: 184 ELSIGLHPHNPTTKSPGGGGGGGGSCFSPILSTTDRVRNGNFLLQPHLFTCYTSST 223

BLAST of Lsi10G007760 vs. NCBI nr
Match: XP_023512167.1 (myb-related protein 308-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 155/238 (65.13%), Postives = 172/238 (72.27%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEKQHTNKGAWTKEEDQRLINYI++HG+G WRSLP AAG               LLR
Sbjct: 4   SPCCEKQHTNKGAWTKEEDQRLINYIKLHGEGGWRSLPNAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFTTEE+E+I+NLHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTTEENELIVNLHSLLGNKWSLIAAKLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRREDSNSNSSNSCLTTEVEEKPPLNLNL 180
           NTHIKRKLY++GIDP+THRPLVN  ST  +    EDSNSNSS SCLTTEVEE P LNLNL
Sbjct: 124 NTHIKRKLYSQGIDPRTHRPLVNKGST-CLTREVEDSNSNSSGSCLTTEVEENPELNLNL 183

Query: 181 ELSIGRHPHNPITKNLNGKGEE--APVLLQFCAPQTEYLETETSSSTPHLFRYYTSTT 226
           ELSIG HPH+P TK+  G G    +P+L       T+ +        PHLF  YTS+T
Sbjct: 184 ELSIGLHPHDPTTKSPGGGGGSCFSPIL-----STTDRVRNGNFLLQPHLFTCYTSST 220

BLAST of Lsi10G007760 vs. TAIR 10
Match: AT4G38620.1 (myb domain protein 4 )

HSP 1 Score: 211.1 bits (536), Expect = 9.4e-55
Identity = 107/169 (63.31%), Postives = 121/169 (71.60%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEED+RL+ YI+ HG+GCWRSLPKAAG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EEDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRR-EDSNSNSSNSCLTT 158
           NTHI+RKL NRGIDP +HRP+  +S++ D    + E   SN+ N   T+
Sbjct: 124 NTHIRRKLINRGIDPTSHRPIQESSASQDSKPTQLEPVTSNTINISFTS 157

BLAST of Lsi10G007760 vs. TAIR 10
Match: AT4G09460.1 (myb domain protein 6 )

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-53
Identity = 102/147 (69.39%), Postives = 111/147 (75.51%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEEDQRL++YI+ HG+GCWRSLPK+AG               LLR
Sbjct: 4   SPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT +ED+III LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSST 137
           NTHIKRKL + GIDPQTHR  +N S T
Sbjct: 124 NTHIKRKLLSHGIDPQTHRQ-INESKT 134

BLAST of Lsi10G007760 vs. TAIR 10
Match: AT4G34990.1 (myb domain protein 32 )

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-51
Identity = 108/203 (53.20%), Postives = 128/203 (63.05%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK HTNKGAWTKEED +LI+YI+ HG+GCWRSLP++AG               L R
Sbjct: 4   SPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAG---------------LQR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT EED++II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMD---------------GRREDSNSNSSNSC 174
           NTH+KRKL  +GIDP THRP+    ++ D                 G + +  +N  +  
Sbjct: 124 NTHVKRKLLRKGIDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDER 183

BLAST of Lsi10G007760 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 )

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 98/145 (67.59%), Postives = 108/145 (74.48%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK H NKGAWTKEEDQ L++YI+ HG+GCWRSLP+AAG               L R
Sbjct: 4   SPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAG---------------LQR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRW+NYLRPDLKRGNFT EEDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNS 135
           NTHIKRKL +RGIDP +HR L+N S
Sbjct: 124 NTHIKRKLLSRGIDPNSHR-LINES 132

BLAST of Lsi10G007760 vs. TAIR 10
Match: AT2G16720.1 (myb domain protein 7 )

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 111/209 (53.11%), Postives = 129/209 (61.72%), Query Frame = 0

Query: 1   SPCCEKQHTNKGAWTKEEDQRLINYIQIHGDGCWRSLPKAAGRTKEIQTSNFFLYSRLLR 60
           SPCCEK+H NKGAWTKEED+RL++YI+ HG+GCWRSLP+AAG               LLR
Sbjct: 4   SPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAG---------------LLR 63

Query: 61  CGKSCRLRWINYLRPDLKRGNFTTEEDEIIINLHSLLGNK-----------TDNEIKNYW 120
           CGKSCRLRWINYLRPDLKRGNFT +EDE+II LHSLLGNK           TDNEIKNYW
Sbjct: 64  CGKSCRLRWINYLRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYW 123

Query: 121 NTHIKRKLYNRGIDPQTHRPLVNNSSTGDMDGRRED---------------------SNS 174
           NTHIKRKL ++GIDP THR  +N +   D+   ++                       N 
Sbjct: 124 NTHIKRKLLSKGIDPATHRG-INEAKISDLKKTKDQIVKDVSFVTKFEETDKSGDQKQNK 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P813954.9e-5666.11Myb-related protein 330 OS=Antirrhinum majus OX=4151 GN=MYB330 PE=2 SV=1[more]
P813931.3e-5354.13Myb-related protein 308 OS=Antirrhinum majus OX=4151 GN=MYB308 PE=2 SV=1[more]
Q9SZP11.3e-5363.31Transcription repressor MYB4 OS=Arabidopsis thaliana OX=3702 GN=MYB4 PE=1 SV=1[more]
Q388511.5e-5269.39Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1[more]
F1B2811.2e-5152.27MYB-like transcription factor 4 OS=Petunia hybrida OX=4102 GN=MYB4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7VBL28.0e-9476.03Myb-related protein 330-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3CCV98.0e-9476.03myb-related protein 330-like OS=Cucumis melo OX=3656 GN=LOC103499594 PE=4 SV=1[more]
A0A6J1F0H02.4e-7464.44transcription factor MYB8-like OS=Cucurbita moschata OX=3662 GN=LOC111438355 PE=... [more]
A0A6J1I9R25.0e-7262.96transcription factor MYB8-like OS=Cucurbita maxima OX=3661 GN=LOC111472382 PE=4 ... [more]
A0A6J1DY651.3e-6457.71transcription factor MYB8-like OS=Momordica charantia OX=3673 GN=LOC111025283 PE... [more]
Match NameE-valueIdentityDescription
XP_038901941.19.7e-10281.86myb-related protein 330-like [Benincasa hispida][more]
XP_004147356.21.1e-9476.54myb-related protein 330 [Cucumis sativus] >KAE8652001.1 hypothetical protein Csa... [more]
XP_008460839.11.7e-9376.03PREDICTED: myb-related protein 330-like [Cucumis melo] >KAA0063091.1 myb-related... [more]
KAG6571317.11.0e-7464.83Myb-related protein 308, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023512167.11.3e-7465.13myb-related protein 308-like isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G38620.19.4e-5563.31myb domain protein 4 [more]
AT4G09460.11.0e-5369.39myb domain protein 6 [more]
AT4G34990.11.3e-5153.20myb domain protein 32 [more]
AT1G22640.12.8e-5167.59myb domain protein 3 [more]
AT2G16720.12.8e-5153.11myb domain protein 7 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 10..75
e-value: 2.5E-11
score: 53.6
coord: 78..115
e-value: 1.3E-4
score: 31.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 6..73
score: 10.301607
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 81..113
e-value: 1.12082E-4
score: 36.7846
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 13..73
e-value: 7.5936E-9
score: 48.3406
NoneNo IPR availableGENE3D1.10.10.60coord: 11..77
e-value: 2.1E-18
score: 68.0
NoneNo IPR availableGENE3D1.10.10.60coord: 78..118
e-value: 6.7E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..161
NoneNo IPR availablePANTHERPTHR47999TRANSCRIPTION FACTOR MYB8-RELATED-RELATEDcoord: 1..161
NoneNo IPR availablePANTHERPTHR47999:SF3TRANSCRIPTION FACTOR MYB7coord: 1..161
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 11..73
e-value: 2.5E-13
score: 50.0
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 6..77
score: 18.426346
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 78..117
score: 12.152429
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 12..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G007760.1Lsi10G007760.1mRNA