Lsi10G007600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G007600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	psbP domain-containing protein 2, chloroplastic isoform X2
Location	chr10: 10434002 .. 10438243 (-)
RNA-Seq Expression	Lsi10G007600
Synteny	Lsi10G007600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTCAACCACAAGGAAGTTACTTGGAAACATCATGGGAGGCAAGTGAGCTTCTATTCCACTAGAAATTCTAATGTTTGGATTTGACTATTTAACAGTATCAAATAAATGACTTGATAATTTGTTTTGTTCTAAACGATAACAGATATTGTTCAATCTAGAGAGCAAAGTTGGCGACTGCTCAGAAAGGGAAGATGGTCAATATCTTTTTCTTGCTCCTCAAGGAATGTCCAAACATCATGTAAAATTGCAGTTAGTTCCTCATCAATCAATGGAGAAAAACCTTACCAAAACTTTCTGAGGGACGAGAAGCTTGTTCCTGATTCAGATCCCCCTAGCATGAAGGATGCTGATCTTTTATATAATTTTCTTGATCGAAGGTCTATTTACATACCTTTATAGGTATTTTAAATTTTTTGAATCACCAACTATTCTTTGGAGATGATAAACCATTAACATCACATGTCATTTGTTTTCATGCTATTATGCATTCAGCGGTTCCAATTCCAAGCTTGTGGTAGTGACGGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAGAAGGTTCCATCTTACTTCCTTTCTTATACTAATATTGCACCTTTTATTTGTTCTTCATCTATGTTTGTCTTAATTGTGAGATGATTAAACATCGACATTGGGAGTTAGACGTGTGTACAAATGTTGCTAAGTTCACTTAAAGCCCAACTCTCACGTTTGTAGCTTTGATACATAAAAGGAAAACTTTCATGCACGGCATATTACAGTTCAGAGACTTTGTTATTGTATGCTGTCTTACTCCATATTGTTTGAAGTTTGCCAACTGATCCAAGCAAACCTTTTCTGTTTTTTAGCATGTAATGGCTGCATGATTGACAAGTGTGGTGTTGACTGTTACTTCTGTTTCTACCCTAAGGCCTAATTCATTTGTAAACTGCACCGCCTTTCAGCATTTCAGGATTAACCCTCAAAAAGGCATCTACCTGCCAAGGTTTTAAAGGGCTAAAGGTGACCTTGAGGTTTTTTCTCTTCAAGTGGTGAGGCGTAAGCCTCAAGGCGGTATGAGATGTAAGCCTCAAATAGTGAATTAATTTGTTTTTACAAAACTTAAATTGGTATGACCAAGTACTGCTAAACATGATAGTCATATAAAAGTGTAAAAAGAAACTTCACCCCCACAATTTTCACTTAATAAAAAATTCTAAAAGGACATCTTCATCATCACTACTATTACTATTATCATTAATAGGATTGATTTATACTATAAATGTTTGCCTTCAGCGTTCTTAAGGTCATAACAGTAAAAATAATCCTAGTTTAAATTGTCACAACTCAAACCTTAATATTTTTGAAGAATTAGGCAATCACTATAATTTTTCTAATCACTAGGCGAGGCATAGAAATTTTAAGCCTCAGTGCGTTTTCACAAAGGCGCAAGCTTCTCTTGTGAGAGGCGTAAGCCTCTTCTGGTTCAACAAAGGCGTAAGTCTCGAGGCTAAAACTTAGAGTCTTGCGTCGAGGCGGACCTCAAGGTGTAAGCCTCAATAGCTTTTTAAAACATTGCTACCTGCTCATTTTCCCTTTGCAAACTAAGTTTACTAAAATTTCATCCTATCAGTTTTCCCTTCCCATTCAGAACGTTAATACCCTACAGCCTACTTCCTATTACTCCGATGAGAAAAGGCTTTCTAGTTTGAACACATTTTATGAATATACATACTAGCAAGTAAATTCTCGTGTTCACATGCTTTTGTGTTCTGTTGTTAGAATCTAGTCACACTGAACTTTTCTATACATAGATTGTCAATTTCCGACGTTATATCTGCTGCCTTCAAGACTTCTGTTAACTTATTTCTGCCTTTTCAAACTGGCATTGCATTGACTTGAAGACCACATTCTGTTTCTTAGACATCAGGTGATCTGAAGGCTCGTGTCATACCTTCCTTTTGTATTGCTATGATGATATTGCCTAGACATTTAGAAACAAAATATCGATAATAGCATAGTGTGTACTCCATCTACATTTTGGGTTAATGGTCTCGTCAACAGTTTTGTGTCTTTCTATTCTATTTATATTTTTGTTTAATATTGAGTGAATTTCCTTGACTTTTCCTATATTGAAAATCCTAGTTCTAAGGAAATTTCATAACTACATGAACTGGTTGTTCTTTCTATCTTTTGTTTTTCCACATCCACATTTTCCCCACCCAAACATTTTTTGTTCAATGAAAATTTAACCCGCGTTTTCTCGTTAAGAAAGTCACATGGTCTTCACCCAGTATCTAATTCTGAATTTTGCAGCACAGTGCTTCTGTGACCCAAAAACACATACTGGGAAGCAACCACTTGAGCACAAATCCACTTCTTTTCCTGAGCAGGAGAGCTCTGAATGTTTCGGTTATTTCACTATTCTTTTATGGATTTTCACCAAACATTTGTGCGGCCGCTTTTGCTGAAGATTTGGAGCTTGAGAGATACACAGATTCGAAGGAGGGTTTTACACTTCTTCGACCATCTTCTTGGGTTAAGGTTTTTAGCCTTCTCTCTCTTCCAACTAACAGCGATACATTTTTTTTTTCCTTTTAACTAAACATTGTGTGAAATTGTGTGTTGGATAAAGATTGATAAGGCAGGGGCAACAGTTTTATTCGAAGAGGAGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAAGCTGAAAAGCGTAAGGTAATTTAGTTTTGAGATGCTGGCATTTCTACTAATTGATGCACAGAGTTGTGTTCTCATTTATTCTTGTGAAGCTTGGCTGTGAAGTATGATGTTTATTGGATTCTTTGAAATGCTAGCAAAAAATTAATGTTTGAGTTTGTTTGTTTTTGTAAAAAGAAACAACATATATTATTGAGTTTAAACAGCATGAGCGCCTTTTTTCATTCATGATCTTTGTTGTGATGAATTGCATGTCTTTCCTCTTAAACGTACTGTCTTGCTGAAGTTTCAAACCAAAATTTAAGATGAAGTTTTGAAAATTTTTATCCAGAAGTAGACGAAGATTTGAAAATAGCAGAAAATGTAAATATTGAAACTTGAATTCAGATCGCTCAAGAAGCTTTAAGTGTGAGTTATGCTTAGCCGAATTGCATGTTTCTAGAGATTAAAAAAATCGGTCATAGCTATGGGTTAAAGTAATAGTTTATTTCTAGAATTTTCGACAAATTTGTATCTATTTGGTTTGTAAACTTTAAAAAGTGTCTAACAGGTATTGAAAGAGTAATAAGTTAGTTATTGAATAGAGTAAGAACGTATTCTATCTGATTTTAGTTTTTTTAGACAATTAAATATATGAAAAGCCATAGTTTTTCTTTTTTAATTACAAATTGGAAATTTCTCCTATAATCTAAGAAGCACGGATACGAGACACGAATACGACACGGACACGGCGACACGCCATATTTTAAATATCTAGGACACGACACGGCAATGACACGTTTACTAAAATATACATTTTTGAAAATATATATCATTTTCATACCAAAATAAATTAAGTAAATGGGTTGATGCATTTATATGCTTAAAAGACTTAGCTTAATGTATTTCACACTCAAAAGTTAGTATTATTGTCATATATGTGTCTTTTTGATCTACTCAACAAGTGTTCAATGCATGTCTAACACATTTGTTGTACTAACAAGTGTCCGATACTGTCGGAGTGTCCAAGTGTCCGACACGTGTCGGACACGGACACGCTAGCCAAACTAAAGTGTCCGTGCTTCTTAGCCTATAATTGGACCCTTTTGTATCCTTAAATATCTTCGGATATTTCATTCGATCAATGAAATTTTCTTATCTAAAAAAAGAGAAAAAATATCACCATATTCGTGTCTGCTTCATAGACTCCATCTCTCGGCCGATTTTTCTATGAATACAGGAAAGTACAAAGGATGCTGCAGTGGTTAGTGTTGCAGAGAGGTCTGGTGAGGGAGGTTTACAGGTGTACGAGTTCGAGTACACGGTCGATAGCACTAGAGGAGGGATGAAGCGGATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTCTACATCCTTAACATATCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAGAAGGATGATGTTGGAGCAAGTTCTTCATTCCTTTGATGCTGCCCCTTCCTCA

mRNA sequence

CTTCCTCAACCACAAGGAAGTTACTTGGAAACATCATGGGAGGCAAATATTGTTCAATCTAGAGAGCAAAGTTGGCGACTGCTCAGAAAGGGAAGATGGTCAATATCTTTTTCTTGCTCCTCAAGGAATGTCCAAACATCATGTAAAATTGCAGTTAGTTCCTCATCAATCAATGGAGAAAAACCTTACCAAAACTTTCTGAGGGACGAGAAGCTTGTTCCTGATTCAGATCCCCCTAGCATGAAGGATGCTGATCTTTTATATAATTTTCTTGATCGAAGCGGTTCCAATTCCAAGCTTGTGGTAGTGACGGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAGAAGCCCAACTCTCACGTTTGTAGCTTTGATACATAAAAGGAAAACTTTCATGCACGGCATATTACAGTTCAGAGACTTTGTTATTAATCTAGTCACACTGAACTTTTCTATACATAGATTGTCAATTTCCGACGTTATATCTGCTGCCTTCAAGACTTCTCACAGTGCTTCTGTGACCCAAAAACACATACTGGGAAGCAACCACTTGAGCACAAATCCACTTCTTTTCCTGAGCAGGAGAGCTCTGAATGTTTCGGTTATTTCACTATTCTTTTATGGATTTTCACCAAACATTTGTGCGGCCGCTTTTGCTGAAGATTTGGAGCTTGAGAGATACACAGATTCGAAGGAGGGTTTTACACTTCTTCGACCATCTTCTTGGGTTAAGATTGATAAGGCAGGGGCAACAGTTTTATTCGAAGAGGAGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAAGCTGAAAAGCGTAAGGAAAGTACAAAGGATGCTGCAGTGGTTAGTGTTGCAGAGAGGTCTGGTGAGGGAGGTTTACAGGTGTACGAGTTCGAGTACACGGTCGATAGCACTAGAGGAGGGATGAAGCGGATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTCTACATCCTTAACATATCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAGAAGGATGATGTTGGAGCAAGTTCTTCATTCCTTTGATGCTGCCCCTTCCTCA

Coding sequence (CDS)

CTTCCTCAACCACAAGGAAGTTACTTGGAAACATCATGGGAGGCAAATATTGTTCAATCTAGAGAGCAAAGTTGGCGACTGCTCAGAAAGGGAAGATGGTCAATATCTTTTTCTTGCTCCTCAAGGAATGTCCAAACATCATGTAAAATTGCAGTTAGTTCCTCATCAATCAATGGAGAAAAACCTTACCAAAACTTTCTGAGGGACGAGAAGCTTGTTCCTGATTCAGATCCCCCTAGCATGAAGGATGCTGATCTTTTATATAATTTTCTTGATCGAAGCGGTTCCAATTCCAAGCTTGTGGTAGTGACGGGAGCTGGAATAAGTATGGAATGTGGAATTCCTGATTATAGAAGCCCAACTCTCACGTTTGTAGCTTTGATACATAAAAGGAAAACTTTCATGCACGGCATATTACAGTTCAGAGACTTTGTTATTAATCTAGTCACACTGAACTTTTCTATACATAGATTGTCAATTTCCGACGTTATATCTGCTGCCTTCAAGACTTCTCACAGTGCTTCTGTGACCCAAAAACACATACTGGGAAGCAACCACTTGAGCACAAATCCACTTCTTTTCCTGAGCAGGAGAGCTCTGAATGTTTCGGTTATTTCACTATTCTTTTATGGATTTTCACCAAACATTTGTGCGGCCGCTTTTGCTGAAGATTTGGAGCTTGAGAGATACACAGATTCGAAGGAGGGTTTTACACTTCTTCGACCATCTTCTTGGGTTAAGATTGATAAGGCAGGGGCAACAGTTTTATTCGAAGAGGAGAATAAGGGAAGCAACAATGTTGGTGTTGTAGTGAACCCTGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAATTTGTAGCTGACAAACTTATACAAGCTGAAAAGCGTAAGGAAAGTACAAAGGATGCTGCAGTGGTTAGTGTTGCAGAGAGGTCTGGTGAGGGAGGTTTACAGGTGTACGAGTTCGAGTACACGGTCGATAGCACTAGAGGAGGGATGAAGCGGATTTTTTCCGCTGCTTTTGTGGCTTCTAAGAAGCTCTACATCCTTAACATATCTCACTCTGACAAACCAGAGAGCCCTCTTGATTCACAAAGAAGGATGATGTTGGAGCAAGTTCTTCATTCCTTTGATGCTGCCCCTTCCTCA

Protein sequence

LPQPQGSYLETSWEANIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPDSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFMHGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQVLHSFDAAPSS

Homology

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BLAST of Lsi10G007600 vs. ExPASy Swiss-Prot
Match: Q8VY52 (PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD2 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.7e-65
Identity = 129/189 (68.25%), Postives = 154/189 (81.48%), Query Frame = 0


Query: 195 LSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGAT 254
           LS+R LN+S+++LFF GF  +  A +     EL+RYTDS  GFTLL PSS+ K++KAGA 
Sbjct: 46  LSKRHLNLSILTLFFNGFLLDNKAKSME---ELQRYTDSNNGFTLLIPSSYTKVEKAGAN 105

Query: 255 VLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERS 314
            LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKLI AEKRKESTK+A VVSV ER+
Sbjct: 106 ALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERA 165

Query: 315 GEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQ 374
           G  G QVYEFEY +DSTRGG+KR+FSAAFV+S KLY+LN+ HSDKPE+PLDS  RM LEQ
Sbjct: 166 GL-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLLNVVHSDKPENPLDSSTRMSLEQ 225

Query: 375 VLHSFDAAP 384
           VLHSFDA P
Sbjct: 226 VLHSFDALP 230

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BLAST of Lsi10G007600 vs. ExPASy Swiss-Prot
Match: Q94AQ6 (NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-15
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGE-KPYQNFLRDEKLVP 75
           ++  SR     L   G   + F    R V+T+C++++   S+  E K    FLRD K+VP
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 76  DSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSP 121
           D+DPP+M+D   LY   ++S   S+L ++TGAG+S ECGIPDYRSP
Sbjct: 73  DADPPNMEDIHKLYRLFEQS---SRLTILTGAGVSTECGIPDYRSP 115

[Close]

BLAST of Lsi10G007600 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.4e-04
Identity = 55/214 (25.70%), Postives = 89/214 (41.59%), Query Frame = 0


Query: 165 SAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAED 224
           SA  ++  +   T+   L S  L+   L+  +     VS      YG S N+        
Sbjct: 37  SARLQSPEADCATENDALLSRRLALTILIGGAALGSRVSAADA-AYGESANVFG---KPK 96

Query: 225 LELERYTDSKEGFTLLRPSSW---VKIDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGE 284
              +  T + +GF +L PS W    +++  G  + +E+    ++NVGV+VNP    S+ +
Sbjct: 97  TNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKD 156

Query: 285 FGTP-QFVA--DKLI--QA-----------EKRKESTKDAAVVSVAERSGEGGLQVYEFE 344
           +G+P QF++  D L+  QA           E     T +    S     G+    ++   
Sbjct: 157 YGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLT 216

Query: 345 YTVDSTRGGMKRIFSAAFVASKKLYILNISHSDK 360
            T D   GG K +   A V+  KLYI      DK
Sbjct: 217 RTADGDEGG-KHLLITATVSDGKLYICKAQAGDK 245

[Close]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL
Match: A0A5D3BUY8 (PsbP domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00390 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 3.0e-141
Identity = 278/377 (73.74%), Postives = 297/377 (78.78%), Query Frame = 0


Query: 9   LETSWEANIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLR 68
           +ETSWEAN  Q   QSW L RKGR  IS  C SRNV+TS  I+VS SSI GEKP+QNFLR
Sbjct: 1   METSWEANTAQPIGQSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLR 60

Query: 69  DEKLVPDSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALI 128
            EK+ PDS+PPS+KD DLLYNFLDR    SKLVV  GAGISMECGIPDY+SP        
Sbjct: 61  GEKVAPDSEPPSLKDVDLLYNFLDR---RSKLVVSIGAGISMECGIPDYKSP-------- 120

Query: 129 HKRKTFMHGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLS 188
                  +G     D  I+                        HSASVTQ+H+LGS+HLS
Sbjct: 121 -------NGAYSSGDRPIS----------------------HQHSASVTQEHMLGSSHLS 180

Query: 189 TNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKI 248
           TN  L LSRRALNVSV+S+F YGFSP+I +A FAED ELERYTDSKEGFTLLRPSSWVK+
Sbjct: 181 TNSFLLLSRRALNVSVLSMFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKV 240

Query: 249 DKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 308
           DKAGATVLFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV
Sbjct: 241 DKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 300

Query: 309 SVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQR 368
            VAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+
Sbjct: 301 GVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQK 337

Query: 369 RMMLEQVLHSFDAAPSS 386
           RMMLEQVLHSFDAAPSS
Sbjct: 361 RMMLEQVLHSFDAAPSS 337

[Close]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL
Match: A0A1S3CDD9 (psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499609 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 3.0e-141
Identity = 278/377 (73.74%), Postives = 297/377 (78.78%), Query Frame = 0


Query: 9   LETSWEANIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLR 68
           +ETSWEAN  Q   QSW L RKGR  IS  C SRNV+TS  I+VS SSI GEKP+QNFLR
Sbjct: 1   METSWEANTAQPIGQSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLR 60

Query: 69  DEKLVPDSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALI 128
            EK+ PDS+PPS+KD DLLYNFLDR    SKLVV  GAGISMECGIPDY+SP        
Sbjct: 61  GEKVAPDSEPPSLKDVDLLYNFLDR---RSKLVVSIGAGISMECGIPDYKSP-------- 120

Query: 129 HKRKTFMHGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLS 188
                  +G     D  I+                        HSASVTQ+H+LGS+HLS
Sbjct: 121 -------NGAYSSGDRPIS----------------------HQHSASVTQEHMLGSSHLS 180

Query: 189 TNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKI 248
           TN  L LSRRALNVSV+S+F YGFSP+I +A FAED ELERYTDSKEGFTLLRPSSWVK+
Sbjct: 181 TNSFLLLSRRALNVSVLSMFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKV 240

Query: 249 DKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 308
           DKAGATVLFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV
Sbjct: 241 DKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 300

Query: 309 SVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQR 368
            VAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+
Sbjct: 301 GVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQK 337

Query: 369 RMMLEQVLHSFDAAPSS 386
           RMMLEQVLHSFDAAPSS
Sbjct: 361 RMMLEQVLHSFDAAPSS 337

[Close]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL
Match: A0A1S3CCX5 (psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499609 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.3e-136
Identity = 270/363 (74.38%), Postives = 288/363 (79.34%), Query Frame = 0


Query: 23  QSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPDSDPPSMK 82
           QSW L RKGR  IS  C SRNV+TS  I+VS SSI GEKP+QNFLR EK+ PDS+PPS+K
Sbjct: 37  QSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLRGEKVAPDSEPPSLK 96

Query: 83  DADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFMHGILQFR 142
           D DLLYNFLDR    SKLVV  GAGISMECGIPDY+SP               +G     
Sbjct: 97  DVDLLYNFLDR---RSKLVVSIGAGISMECGIPDYKSP---------------NGAYSSG 156

Query: 143 DFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNV 202
           D  I+                        HSASVTQ+H+LGS+HLSTN  L LSRRALNV
Sbjct: 157 DRPIS----------------------HQHSASVTQEHMLGSSHLSTNSFLLLSRRALNV 216

Query: 203 SVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATVLFEEENK 262
           SV+S+F YGFSP+I +A FAED ELERYTDSKEGFTLLRPSSWVK+DKAGATVLFEE NK
Sbjct: 217 SVLSMFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNK 276

Query: 263 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSGEGGLQVY 322
           GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSGEGGLQVY
Sbjct: 277 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVY 336

Query: 323 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQVLHSFDAA 382
           EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+RMMLEQVLHSFDAA
Sbjct: 337 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 359

Query: 383 PSS 386
           PSS
Sbjct: 397 PSS 359

[Close]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL
Match: A0A0A0LMF6 (Deacetylase sirtuin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336660 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.9e-127
Identity = 257/363 (70.80%), Postives = 274/363 (75.48%), Query Frame = 0


Query: 23  QSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPDSDPPSMK 82
           QSWRL RKGR  IS  CSSRNVQTS  I+VS SSINGEK +QNFLRDEK+ PDS+PPS+K
Sbjct: 37  QSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLK 96

Query: 83  DADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFMHGILQFR 142
           D D LYNFLD     SKLV+ TGAGISMECGIPDY+SP               +G     
Sbjct: 97  DVDFLYNFLD---LRSKLVISTGAGISMECGIPDYKSP---------------NGAYSSG 156

Query: 143 DFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNV 202
           D  I                        +H      +   G   L     L  SRRA+NV
Sbjct: 157 DRPI------------------------AHQCFCDPRTHTGKQPLEHKFALVTSRRAMNV 216

Query: 203 SVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATVLFEEENK 262
           S++SLFFYGFS +I +A FAED ELERYTDSKEGFTLLRPSSWVK+DKAGATVLFEE NK
Sbjct: 217 SILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNK 276

Query: 263 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSGEGGLQVY 322
           GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSGEGGLQVY
Sbjct: 277 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVY 336

Query: 323 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQVLHSFDAA 382
           EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+RMMLEQVLHSFDAA
Sbjct: 337 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 357

Query: 383 PSS 386
           PSS
Sbjct: 397 PSS 357

[Close]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL
Match: A0A6J1D5N4 (psbP domain-containing protein 2, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017514 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.6e-118
Identity = 247/370 (66.76%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPD 75
           +IVQSR +SW LL K    IS  CSS NVQ+ CKI+  SSSIN  K   NFL D+KLV D
Sbjct: 23  DIVQSR-KSWPLLAKEGRLISLYCSSENVQSLCKISEGSSSIN--KLPLNFLXDKKLVFD 82

Query: 76  SDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFM 135
           SDP + K  DL YNFL++S   +KL  + GAG S ECGI DYR                 
Sbjct: 83  SDPHTKKAVDLSYNFLNQS---TKLAALPGAGRSTECGIADYR----------------- 142

Query: 136 HGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFL 195
                                                SASVTQK +LGS HL T+  LFL
Sbjct: 143 -------------------------------------SASVTQKRVLGSGHLRTSAPLFL 202

Query: 196 SRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATV 255
           +RR LN+SVISL  YGFSPNICAA FA+DLELERYTDSKEGFTLLRPSSWVK++KAGATV
Sbjct: 203 TRRTLNLSVISLLLYGFSPNICAAVFADDLELERYTDSKEGFTLLRPSSWVKVEKAGATV 262

Query: 256 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSG 315
           LFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSG
Sbjct: 263 LFEEANKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSG 322

Query: 316 EGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQV 375
           +GG QVYEFEYT+DSTRGGMKR+FSAAFV+SKKLYILNISHSDKP+SPLDS RRMMLEQV
Sbjct: 323 DGGQQVYEFEYTIDSTRGGMKRVFSAAFVSSKKLYILNISHSDKPDSPLDSHRRMMLEQV 332

Query: 376 LHSFDAAPSS 386
           LHSFDAAPSS
Sbjct: 383 LHSFDAAPSS 332

[Close]

BLAST of Lsi10G007600 vs. NCBI nr
Match: XP_008460858.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis melo] >KAA0040740.1 psbP domain-containing protein 2 [Cucumis melo var. makuwa] >TYK02056.1 psbP domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 511.5 bits (1316), Expect = 6.2e-141
Identity = 278/377 (73.74%), Postives = 297/377 (78.78%), Query Frame = 0


Query: 9   LETSWEANIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLR 68
           +ETSWEAN  Q   QSW L RKGR  IS  C SRNV+TS  I+VS SSI GEKP+QNFLR
Sbjct: 1   METSWEANTAQPIGQSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLR 60

Query: 69  DEKLVPDSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALI 128
            EK+ PDS+PPS+KD DLLYNFLDR    SKLVV  GAGISMECGIPDY+SP        
Sbjct: 61  GEKVAPDSEPPSLKDVDLLYNFLDR---RSKLVVSIGAGISMECGIPDYKSP-------- 120

Query: 129 HKRKTFMHGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLS 188
                  +G     D  I+                        HSASVTQ+H+LGS+HLS
Sbjct: 121 -------NGAYSSGDRPIS----------------------HQHSASVTQEHMLGSSHLS 180

Query: 189 TNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKI 248
           TN  L LSRRALNVSV+S+F YGFSP+I +A FAED ELERYTDSKEGFTLLRPSSWVK+
Sbjct: 181 TNSFLLLSRRALNVSVLSMFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKV 240

Query: 249 DKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 308
           DKAGATVLFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV
Sbjct: 241 DKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 300

Query: 309 SVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQR 368
            VAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+
Sbjct: 301 GVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQK 337

Query: 369 RMMLEQVLHSFDAAPSS 386
           RMMLEQVLHSFDAAPSS
Sbjct: 361 RMMLEQVLHSFDAAPSS 337

[Close]

BLAST of Lsi10G007600 vs. NCBI nr
Match: XP_008460857.1 (PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 2.7e-136
Identity = 270/363 (74.38%), Postives = 288/363 (79.34%), Query Frame = 0


Query: 23  QSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPDSDPPSMK 82
           QSW L RKGR  IS  C SRNV+TS  I+VS SSI GEKP+QNFLR EK+ PDS+PPS+K
Sbjct: 37  QSWGLHRKGRCLISLYCFSRNVETSRDISVSFSSIKGEKPHQNFLRGEKVAPDSEPPSLK 96

Query: 83  DADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFMHGILQFR 142
           D DLLYNFLDR    SKLVV  GAGISMECGIPDY+SP               +G     
Sbjct: 97  DVDLLYNFLDR---RSKLVVSIGAGISMECGIPDYKSP---------------NGAYSSG 156

Query: 143 DFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNV 202
           D  I+                        HSASVTQ+H+LGS+HLSTN  L LSRRALNV
Sbjct: 157 DRPIS----------------------HQHSASVTQEHMLGSSHLSTNSFLLLSRRALNV 216

Query: 203 SVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATVLFEEENK 262
           SV+S+F YGFSP+I +A FAED ELERYTDSKEGFTLLRPSSWVK+DKAGATVLFEE NK
Sbjct: 217 SVLSMFLYGFSPSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNK 276

Query: 263 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSGEGGLQVY 322
           GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSGEGGLQVY
Sbjct: 277 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVY 336

Query: 323 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQVLHSFDAA 382
           EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+RMMLEQVLHSFDAA
Sbjct: 337 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 359

Query: 383 PSS 386
           PSS
Sbjct: 397 PSS 359

[Close]

BLAST of Lsi10G007600 vs. NCBI nr
Match: XP_011649436.1 (psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis sativus] >XP_031736654.1 psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 6.8e-132
Identity = 265/377 (70.29%), Postives = 283/377 (75.07%), Query Frame = 0


Query: 9   LETSWEANIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLR 68
           +ETSWEAN  Q   QSWRL RKGR  IS  CSSRNVQTS  I+VS SSINGEK +QNFLR
Sbjct: 1   METSWEANTAQPIGQSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLR 60

Query: 69  DEKLVPDSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALI 128
           DEK+ PDS+PPS+KD D LYNFLD     SKLV+ TGAGISMECGIPDY+SP        
Sbjct: 61  DEKVAPDSEPPSLKDVDFLYNFLD---LRSKLVISTGAGISMECGIPDYKSP-------- 120

Query: 129 HKRKTFMHGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLS 188
                  +G     D  I                        +H      +   G   L 
Sbjct: 121 -------NGAYSSGDRPI------------------------AHQCFCDPRTHTGKQPLE 180

Query: 189 TNPLLFLSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKI 248
               L  SRRA+NVS++SLFFYGFS +I +A FAED ELERYTDSKEGFTLLRPSSWVK+
Sbjct: 181 HKFALVTSRRAMNVSILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKV 240

Query: 249 DKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 308
           DKAGATVLFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV
Sbjct: 241 DKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV 300

Query: 309 SVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQR 368
            VAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+
Sbjct: 301 GVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQK 335

Query: 369 RMMLEQVLHSFDAAPSS 386
           RMMLEQVLHSFDAAPSS
Sbjct: 361 RMMLEQVLHSFDAAPSS 335

[Close]

BLAST of Lsi10G007600 vs. NCBI nr
Match: XP_004147342.1 (psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis sativus] >KGN62219.1 hypothetical protein Csa_016930 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 3.9e-127
Identity = 257/363 (70.80%), Postives = 274/363 (75.48%), Query Frame = 0


Query: 23  QSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPDSDPPSMK 82
           QSWRL RKGR  IS  CSSRNVQTS  I+VS SSINGEK +QNFLRDEK+ PDS+PPS+K
Sbjct: 37  QSWRLHRKGRCLISLYCSSRNVQTSRNISVSFSSINGEKTHQNFLRDEKVAPDSEPPSLK 96

Query: 83  DADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFMHGILQFR 142
           D D LYNFLD     SKLV+ TGAGISMECGIPDY+SP               +G     
Sbjct: 97  DVDFLYNFLD---LRSKLVISTGAGISMECGIPDYKSP---------------NGAYSSG 156

Query: 143 DFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFLSRRALNV 202
           D  I                        +H      +   G   L     L  SRRA+NV
Sbjct: 157 DRPI------------------------AHQCFCDPRTHTGKQPLEHKFALVTSRRAMNV 216

Query: 203 SVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATVLFEEENK 262
           S++SLFFYGFS +I +A FAED ELERYTDSKEGFTLLRPSSWVK+DKAGATVLFEE NK
Sbjct: 217 SILSLFFYGFSTSISSAVFAEDFELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEGNK 276

Query: 263 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSGEGGLQVY 322
           GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSGEGGLQVY
Sbjct: 277 GSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSGEGGLQVY 336

Query: 323 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQVLHSFDAA 382
           EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQ+RMMLEQVLHSFDAA
Sbjct: 337 EFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQKRMMLEQVLHSFDAA 357

Query: 383 PSS 386
           PSS
Sbjct: 397 PSS 357

[Close]

BLAST of Lsi10G007600 vs. NCBI nr
Match: XP_022148979.1 (psbP domain-containing protein 2, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 436.0 bits (1120), Expect = 3.3e-118
Identity = 247/370 (66.76%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGEKPYQNFLRDEKLVPD 75
           +IVQSR +SW LL K    IS  CSS NVQ+ CKI+  SSSIN  K   NFL D+KLV D
Sbjct: 23  DIVQSR-KSWPLLAKEGRLISLYCSSENVQSLCKISEGSSSIN--KLPLNFLXDKKLVFD 82

Query: 76  SDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSPTLTFVALIHKRKTFM 135
           SDP + K  DL YNFL++S   +KL  + GAG S ECGI DYR                 
Sbjct: 83  SDPHTKKAVDLSYNFLNQS---TKLAALPGAGRSTECGIADYR----------------- 142

Query: 136 HGILQFRDFVINLVTLNFSIHRLSISDVISAAFKTSHSASVTQKHILGSNHLSTNPLLFL 195
                                                SASVTQK +LGS HL T+  LFL
Sbjct: 143 -------------------------------------SASVTQKRVLGSGHLRTSAPLFL 202

Query: 196 SRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGATV 255
           +RR LN+SVISL  YGFSPNICAA FA+DLELERYTDSKEGFTLLRPSSWVK++KAGATV
Sbjct: 203 TRRTLNLSVISLLLYGFSPNICAAVFADDLELERYTDSKEGFTLLRPSSWVKVEKAGATV 262

Query: 256 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERSG 315
           LFEE NKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVV VAERSG
Sbjct: 263 LFEEANKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGVAERSG 322

Query: 316 EGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQV 375
           +GG QVYEFEYT+DSTRGGMKR+FSAAFV+SKKLYILNISHSDKP+SPLDS RRMMLEQV
Sbjct: 323 DGGQQVYEFEYTIDSTRGGMKRVFSAAFVSSKKLYILNISHSDKPDSPLDSHRRMMLEQV 332

Query: 376 LHSFDAAPSS 386
           LHSFDAAPSS
Sbjct: 383 LHSFDAAPSS 332

[Close]

BLAST of Lsi10G007600 vs. TAIR 10
Match: AT2G28605.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-66
Identity = 129/189 (68.25%), Postives = 154/189 (81.48%), Query Frame = 0


Query: 195 LSRRALNVSVISLFFYGFSPNICAAAFAEDLELERYTDSKEGFTLLRPSSWVKIDKAGAT 254
           LS+R LN+S+++LFF GF  +  A +     EL+RYTDS  GFTLL PSS+ K++KAGA 
Sbjct: 46  LSKRHLNLSILTLFFNGFLLDNKAKSME---ELQRYTDSNNGFTLLIPSSYTKVEKAGAN 105

Query: 255 VLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVSVAERS 314
            LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKLI AEKRKESTK+A VVSV ER+
Sbjct: 106 ALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKLINAEKRKESTKEAEVVSVGERA 165

Query: 315 GEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHSDKPESPLDSQRRMMLEQ 374
           G  G QVYEFEY +DSTRGG+KR+FSAAFV+S KLY+LN+ HSDKPE+PLDS  RM LEQ
Sbjct: 166 GL-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLLNVVHSDKPENPLDSSTRMSLEQ 225

Query: 375 VLHSFDAAP 384
           VLHSFDA P
Sbjct: 226 VLHSFDALP 230

[Close]

BLAST of Lsi10G007600 vs. TAIR 10
Match: AT5G09230.2 (sirtuin 2 )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGE-KPYQNFLRDEKLVP 75
           ++  SR     L   G   + F    R V+T+C++++   S+  E K    FLRD K+VP
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 76  DSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSP 121
           D+DPP+M+D   LY   ++S   S+L ++TGAG+S ECGIPDYRSP
Sbjct: 73  DADPPNMEDIHKLYRLFEQS---SRLTILTGAGVSTECGIPDYRSP 115

[Close]

BLAST of Lsi10G007600 vs. TAIR 10
Match: AT5G09230.1 (sirtuin 2 )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGE-KPYQNFLRDEKLVP 75
           ++  SR     L   G   + F    R V+T+C++++   S+  E K    FLRD K+VP
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 76  DSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSP 121
           D+DPP+M+D   LY   ++S   S+L ++TGAG+S ECGIPDYRSP
Sbjct: 73  DADPPNMEDIHKLYRLFEQS---SRLTILTGAGVSTECGIPDYRSP 115

[Close]

BLAST of Lsi10G007600 vs. TAIR 10
Match: AT5G09230.3 (sirtuin 2 )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGE-KPYQNFLRDEKLVP 75
           ++  SR     L   G   + F    R V+T+C++++   S+  E K    FLRD K+VP
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 76  DSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSP 121
           D+DPP+M+D   LY   ++S   S+L ++TGAG+S ECGIPDYRSP
Sbjct: 73  DADPPNMEDIHKLYRLFEQS---SRLTILTGAGVSTECGIPDYRSP 115

[Close]

BLAST of Lsi10G007600 vs. TAIR 10
Match: AT5G09230.7 (sirtuin 2 )

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-16
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 16  NIVQSREQSWRLLRKGRWSISFSCSSRNVQTSCKIAVSSSSINGE-KPYQNFLRDEKLVP 75
           ++  SR     L   G   + F    R V+T+C++++   S+  E K    FLRD K+VP
Sbjct: 16  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 75

Query: 76  DSDPPSMKDADLLYNFLDRSGSNSKLVVVTGAGISMECGIPDYRSP 121
           D+DPP+M+D   LY   ++S   S+L ++TGAG+S ECGIPDYRSP
Sbjct: 76  DADPPNMEDIHKLYRLFEQS---SRLTILTGAGVSTECGIPDYRSP 118

The following BLAST results are available for this feature:

BLAST of Lsi10G007600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY52	5.7e-65	68.25	PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94AQ6	1.4e-15	42.45	NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=...	[more]
Q40407	7.4e-04	25.70	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]

BLAST of Lsi10G007600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUY8	3.0e-141	73.74	PsbP domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CDD9	3.0e-141	73.74	psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3CCX5	1.3e-136	74.38	psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A0A0LMF6	1.9e-127	70.80	Deacetylase sirtuin-type domain-containing protein OS=Cucumis sativus OX=3659 GN...	[more]
A0A6J1D5N4	1.6e-118	66.76	psbP domain-containing protein 2, chloroplastic isoform X2 OS=Momordica charanti...	[more]

BLAST of Lsi10G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460858.1	6.2e-141	73.74	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis m...	[more]
XP_008460857.1	2.7e-136	74.38	PREDICTED: psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis m...	[more]
XP_011649436.1	6.8e-132	70.29	psbP domain-containing protein 2, chloroplastic isoform X2 [Cucumis sativus] >XP...	[more]
XP_004147342.1	3.9e-127	70.80	psbP domain-containing protein 2, chloroplastic isoform X1 [Cucumis sativus] >KG...	[more]
XP_022148979.1	3.3e-118	66.76	psbP domain-containing protein 2, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of Lsi10G007600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28605.1	4.1e-66	68.25	Photosystem II reaction center PsbP family protein	[more]
AT5G09230.2	1.0e-16	42.45	sirtuin 2	[more]
AT5G09230.1	1.0e-16	42.45	sirtuin 2	[more]
AT5G09230.3	1.0e-16	42.45	sirtuin 2	[more]
AT5G09230.7	1.0e-16	42.45	sirtuin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 227..380 e-value: 2.5E-34 score: 118.6
None	No IPR available	GENE3D	3.40.50.1220		coord: 79..178 e-value: 1.3E-8 score: 36.5
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 215..380 e-value: 9.3E-44 score: 151.3
None	No IPR available	PANTHER	PTHR31407:SF3	PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC	coord: 170..382
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 170..382
IPR026590	Sirtuin family, catalytic core domain	PROSITE	PS50305	SIRTUIN	coord: 85..385 score: 9.229607
IPR029035	DHS-like NAD/FAD-binding domain superfamily	SUPERFAMILY	52467	DHS-like NAD/FAD-binding domain	coord: 65..146
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 228..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G007600.1	Lsi10G007600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0016740	transferase activity