Lsi10G006930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G006930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPlant transposase (Ptta/En/Spm family)
Locationchr10: 9697228 .. 9699625 (+)
RNA-Seq ExpressionLsi10G006930
SyntenyLsi10G006930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCAATTAGAAGTCGTCGTCATGTGGTGGTCATAGAGTCTGGTCCTTTAGAAGGAAACACTAGCAATTTGGAGGAAGCTAATGTTGATACAAAAGCTAATTTGACAGTTAATGGTGATATTGATGTAATAGGTATGTATGAATTTATTATACGAATTGACATTCAAGTTTTATAATTTAAATGTTTCACTTTTTTTCCTTTAAAAAAAGATTCATGTAAGACACGGGGTCAAACACGCAACCTATAAAAGCTGGTTCGAATGCTTTGGGCAATTTCTTAGGGACTATTGGAAGAACTTGTAATCTTTATCTCCTAAATTATGATGATTGGAGAAAGGTACCCAATATTTACAAGGAAGAAGTTTGGCACATCATTAAGGTATGCAAACAAAATTATATGTTGTATGAATTTTTGTATATCAATGTTACTTATTGTTATACTCATTGACTTTGTATTTTTCAGTCAAAATTCACTGTTCAAGAAAAACATAAAAAATTGTGTTTGTCATCATTATCTAGAAAGTGGGATGGCTATAAATGTAATCTACGAGGAAAGTATGTTTTAGATATGATACAGAAGATTAATGCTTGAAACATAAACCTGACAACATACCTAGGGATCAGTGGGTTGGCTTAGTCTCTTTTTGGTACTCATTTGAAGGAATGGTAATCTTTTTAATTTTTTATTATTAGATAATAATTTGATTATTTTATGCAATTCTAGATTTATATATTTATCTCAGAGACGAAATGCAAGAAATACTGAGATACGTAAAAAACAAAAATTTACTCATTCATGTGGAAGAAAAATTCTAGCACGTAAAACAAATGAGATGGTAATTTTCTCTATACATTTGTATTGTTAAGCAAGTTATGATTTACATATTAACTAGTTTACTAAATGATAGAAAGAAGAGTTGGGGAAAGATCCCACCAGAGTAGAAGTCTTTCTAACTGCTCATAAGCTAAAGGATGGAAGTTACATGGATGAGGAGTTTGCTAAAGTTGTCGTAAGTTCAAAATTAATTTAAAAAATTAAGAGCTTTATTGTTTAGTAATTATAATCTTATTTTTTTATAGGAAAAATTTCAAGAATGTATGAGTCAAAATGTTGATACCTCAAGAGTTATGCCTTCTGAGAAGGAGGTGTATGAACAAGTCATGGGTAAAGAGCATTCTGGACGTGTTCGTGGAATGGGATTAGGACCTACACCCACTGAAGTTTTTAAAACTAAATATCATCAATGTGTCGGGGCTGAGATCACTTCTGAGACAAGTATGGAAAACCATGAAGCTGTAGAAGAAAGATCTAGATTAACAAAACTAGAGTCCGAAATGGTGGACATGCGGTCAGATATGAAGAAAAATACTTTTATTATTGGGACAAATGAATTCTACACAAGTTGGTAGCAGTAGTGGGACATCTTTAGATGACAATTCAAGAGAGGTAGGAAATATAAGTTAATTTATTTTAATATTGTTGTCTTAATATATTTCTTATTCTAATACATTTTTTTTAATTTTTTAATAGGATCAAAGGGAAAATGTATCTGAAAGCAACAAAAGATCAGTGATAGATAGTTTATTTTCATTTTTCTTTTATTGATTTGAATGAGGATAGGTGATAGTACTTCATAGGATTTTTAATAGTGATAGGGGACAGTACTACTAGGATTTTGAATACTTTATCTTCCAATTTTTCTATTAGTACTTGATCATATTATTACTTCCCCTAGCAATTTTTACTTGTTATAATATTTGTAAGTGTGAATGAAATTTGAAAAATATATGTGGAATGCAAAAAGAATCATAGTTACAATTTGTTGGAAAATATAGACTATAACAATTGTTGTGATATAGGAACTAAAATTGTTAGTGTAAAATCATTTAATTATTGCAGCAATTATCAAAGAAGTTTTATGTTTGCACAAATTGTTGCAAAAGAGTAGAGATCGCTATAACTATTGCAATAGAGAAAAATATCGTTGCACATATTCAAACTATTAAAGCAATAATAAATCGTTGCAATAGGATCAAATTGCAACGGTTTCAAGGTGCTCCTATTATTTTTTTAACCGATCCGAATTAGCAGAGGTTATTCACTACTGCTAATTTATTTAAAGAATTGTTGCTATTGGAATCGTAATTGCAGCGGTTCATATAATATTGCAGCGGTTACTAAAATGTTGCGCATGAAACAACAGTTGCTAAAATATTGCATTTTGATGTAATTAACCACTACAATATAGGTACCTATTGCGGCGCTTATTTAATCTGATTCCAGCGGTTGTTAAAACCGCTGCAATAAAGGCTTTCAACACAGCCTCTGCCAGCAGTTTCTTAACCGTTGCGACATATCTCCCAACGGTTTCAAACTGCCGCAATAGCTCATAA

mRNA sequence

ATGCCTTCAATTAGAAGTCGTCGTCATGTGGTGGTCATAGAGTCTGGTCCTTTAGAAGGAAACACTAGCAATTTGGAGGAAGCTAATGTTGATACAAAAGCTAATTTGACAGTTAATGGTGATATTGATGTAATAGGTATTCAAAATTCACTGTTCAAGAAAAACATAAAAAATTGTGTTTGTCATCATTATCTAGAAAGTGGGATGGCTATAAATGTAATCTACGAGGAAAAAGAGTTGGGGAAAGATCCCACCAGAGTAGAAGTCTTTCTAACTGCTCATAAGCTAAAGGATGGAAGTTACATGGATGAGGAGTTTGCTAAAGTTGTCGAAAAATTTCAAGAATGTATGAGTCAAAATGTTGATACCTCAAGAGTTATGCCTTCTGAGAAGGAGGTGTATGAACAAGTCATGGGTAAAGAGCATTCTGGACGTGTTCGTGGAATGGGATTAGGACCTACACCCACTGAAGTTTTTAAAACTAAATATCATCAATGTGTCGGGGCTGAGATCACTTCTGAGACAAGTATGGAAAACCATGAAGCTGTAGAAGAAAGATCTAGATTAACAAAACTAGAGTCCGAAATGGTGGACATGCGGTACCTATTGCGGCGCTTATTTAATCTGATTCCAGCGGTTGTTAAAACCGCTGCAATAAAGGCTTTCAACACAGCCTCTGCCAGCAGTTTCTTAACCGTTGCGACATATCTCCCAACGGTTTCAAACTGCCGCAATAGCTCATAA

Coding sequence (CDS)

ATGCCTTCAATTAGAAGTCGTCGTCATGTGGTGGTCATAGAGTCTGGTCCTTTAGAAGGAAACACTAGCAATTTGGAGGAAGCTAATGTTGATACAAAAGCTAATTTGACAGTTAATGGTGATATTGATGTAATAGGTATTCAAAATTCACTGTTCAAGAAAAACATAAAAAATTGTGTTTGTCATCATTATCTAGAAAGTGGGATGGCTATAAATGTAATCTACGAGGAAAAAGAGTTGGGGAAAGATCCCACCAGAGTAGAAGTCTTTCTAACTGCTCATAAGCTAAAGGATGGAAGTTACATGGATGAGGAGTTTGCTAAAGTTGTCGAAAAATTTCAAGAATGTATGAGTCAAAATGTTGATACCTCAAGAGTTATGCCTTCTGAGAAGGAGGTGTATGAACAAGTCATGGGTAAAGAGCATTCTGGACGTGTTCGTGGAATGGGATTAGGACCTACACCCACTGAAGTTTTTAAAACTAAATATCATCAATGTGTCGGGGCTGAGATCACTTCTGAGACAAGTATGGAAAACCATGAAGCTGTAGAAGAAAGATCTAGATTAACAAAACTAGAGTCCGAAATGGTGGACATGCGGTACCTATTGCGGCGCTTATTTAATCTGATTCCAGCGGTTGTTAAAACCGCTGCAATAAAGGCTTTCAACACAGCCTCTGCCAGCAGTTTCTTAACCGTTGCGACATATCTCCCAACGGTTTCAAACTGCCGCAATAGCTCATAA

Protein sequence

MPSIRSRRHVVVIESGPLEGNTSNLEEANVDTKANLTVNGDIDVIGIQNSLFKKNIKNCVCHHYLESGMAINVIYEEKELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQNVDTSRVMPSEKEVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVDMRYLLRRLFNLIPAVVKTAAIKAFNTASASSFLTVATYLPTVSNCRNSS
Homology
BLAST of Lsi10G006930 vs. ExPASy TrEMBL
Match: A0A438CKK3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_097576 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 52/177 (29.38%), Postives = 84/177 (47.46%), Query Frame = 0

Query: 36  LTVNGDIDVIGIQNSLFKKNIKNCVCHHYLESGMAINVIYE--EKELGKDPTRVEVFLTA 95
           + + G     G  +   K N    V  H   S     + YE  +KE   +P R+E+F   
Sbjct: 14  MMIGGGSSTFGDISEKNKANRAKQVIKHTAGSKSYAQIRYEQAQKEDRSEPNRIEMFALT 73

Query: 96  HKLKDGSYMDEEFAKVVEKFQECMSQNVDTSRVMPSEK-------EVYEQVMGKEHSGRV 155
           HK KDG+ +D+   +++++FQ+ +SQ   TS    +         E+Y QVMG E  G V
Sbjct: 74  HKRKDGTPIDDHSKEIMDQFQQLLSQPDGTSFSTSASSGASTYVDEIYTQVMGPERHGHV 133

Query: 156 RGMGLGPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVDMRYLL 204
           RG G GPTPT VF +   +  GA ++++        +    + T    E+ +++Y L
Sbjct: 134 RGYGFGPTPTLVFGSTSRRRSGAILSTQLENAQEMLIAAEQKFTTATEELSNVKYEL 190

BLAST of Lsi10G006930 vs. ExPASy TrEMBL
Match: A5AQY2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042244 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-11
Identity = 50/160 (31.25%), Postives = 79/160 (49.38%), Query Frame = 0

Query: 53  KKNIKNCVCHHYLESGMAINVIYE--EKELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVV 112
           K N    V  H   S     + YE  +KE   +P R+E+F   HK KDG+ +D+   +++
Sbjct: 455 KANRAKQVIKHTAGSKSYAQIRYEQAQKEDRSEPNRIEMFALTHKRKDGTPIDDHSKEIM 514

Query: 113 EKFQECMSQNVDTSRVMPSEK-------EVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKY 172
           ++FQ+ +SQ   TS    +         E+Y QVMG E  G VRG G GPTPT VF +  
Sbjct: 515 DQFQQLLSQPDGTSFSTSASSGASTYVDEIYTQVMGPERHGHVRGYGFGPTPTLVFGSTS 574

Query: 173 HQCVGAEITSETSMENHEAVEERSRLTKLESEMVDMRYLL 204
            +  GA ++++        +    + T    E+ +++Y L
Sbjct: 575 RRRSGAILSTQLENAQEMLIAAEQKFTTATEELSNVKYEL 614

BLAST of Lsi10G006930 vs. ExPASy TrEMBL
Match: A0A1S4C1D9 (uncharacterized protein LOC107814136 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107814136 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.1e-11
Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 0

Query: 79  ELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQN-VDTSRVMPSEKEVYEQV 138
           E G+ P R++++L  HK +DG+Y++E   ++ EK +  +SQ+ VD S V+P+  +   +V
Sbjct: 55  ETGRRPGRIQLYLDTHKKQDGTYVNEAAKEICEKIELALSQSMVDESEVLPN--DAVGKV 114

Query: 139 MGKEHSGRVRGMGLGPTPTEVFK-TKYHQCVGAEITSETSMENH 181
           +GKEHSGRVR +GLG  P++VFK T+   C     +S+ S  NH
Sbjct: 115 LGKEHSGRVRCLGLGAVPSKVFKHTRPRFCGMNASSSDASCLNH 156

BLAST of Lsi10G006930 vs. ExPASy TrEMBL
Match: A0A6P4D9W7 (uncharacterized protein LOC107478310 isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107485549 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.3e-11
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 53  KKNIKNCVCHHYLESG----MAINVIYEEKELGKDPTRVEVFLTAHKLKDGSYMDEEFAK 112
           KKN KN     Y  +G     A  +  E ++ G+   R E+++  HK KDGSYM++E   
Sbjct: 280 KKNAKNRSKQQYTHTGGSKSFARRIEEESEQQGRIVGRGELWIAVHKKKDGSYMNDEARA 339

Query: 113 VVEKFQECMSQNVDTSRVMPSEKEVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKYH 165
           + E+ +E + Q  ++SRV+ S+ +   QV GKE  GRVRG+G GPTP+++F    H
Sbjct: 340 IGERIEE-IEQQDESSRVL-SQNDSIAQVFGKEKPGRVRGVGFGPTPSQLFGPNSH 393

BLAST of Lsi10G006930 vs. ExPASy TrEMBL
Match: A0A6P4DAP9 (uncharacterized protein LOC107488820 OS=Arachis duranensis OX=130453 GN=LOC107488820 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.3e-11
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 53  KKNIKNCVCHHYLESG----MAINVIYEEKELGKDPTRVEVFLTAHKLKDGSYMDEEFAK 112
           KKN KN     Y  +G     A  +  E ++ G+   R E+++  HK KDGSYM++E   
Sbjct: 280 KKNAKNRSKQQYTHTGGSKSFARRIEEESEQQGRIVGRGELWIAVHKKKDGSYMNDEARA 339

Query: 113 VVEKFQECMSQNVDTSRVMPSEKEVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKYH 165
           + E+ +E + Q  ++SRV+ S+ +   QV GKE  GRVRG+G GPTP+++F    H
Sbjct: 340 IGERIEE-IEQQDESSRVL-SQNDSIAQVFGKEKPGRVRGVGFGPTPSQLFGPNSH 393

BLAST of Lsi10G006930 vs. NCBI nr
Match: RVW23753.1 (hypothetical protein CK203_097576 [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-11
Identity = 52/177 (29.38%), Postives = 84/177 (47.46%), Query Frame = 0

Query: 36  LTVNGDIDVIGIQNSLFKKNIKNCVCHHYLESGMAINVIYE--EKELGKDPTRVEVFLTA 95
           + + G     G  +   K N    V  H   S     + YE  +KE   +P R+E+F   
Sbjct: 14  MMIGGGSSTFGDISEKNKANRAKQVIKHTAGSKSYAQIRYEQAQKEDRSEPNRIEMFALT 73

Query: 96  HKLKDGSYMDEEFAKVVEKFQECMSQNVDTSRVMPSEK-------EVYEQVMGKEHSGRV 155
           HK KDG+ +D+   +++++FQ+ +SQ   TS    +         E+Y QVMG E  G V
Sbjct: 74  HKRKDGTPIDDHSKEIMDQFQQLLSQPDGTSFSTSASSGASTYVDEIYTQVMGPERHGHV 133

Query: 156 RGMGLGPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVDMRYLL 204
           RG G GPTPT VF +   +  GA ++++        +    + T    E+ +++Y L
Sbjct: 134 RGYGFGPTPTLVFGSTSRRRSGAILSTQLENAQEMLIAAEQKFTTATEELSNVKYEL 190

BLAST of Lsi10G006930 vs. NCBI nr
Match: CAN73688.1 (hypothetical protein VITISV_042244 [Vitis vinifera])

HSP 1 Score: 78.6 bits (192), Expect = 8.6e-11
Identity = 50/160 (31.25%), Postives = 79/160 (49.38%), Query Frame = 0

Query: 53  KKNIKNCVCHHYLESGMAINVIYE--EKELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVV 112
           K N    V  H   S     + YE  +KE   +P R+E+F   HK KDG+ +D+   +++
Sbjct: 455 KANRAKQVIKHTAGSKSYAQIRYEQAQKEDRSEPNRIEMFALTHKRKDGTPIDDHSKEIM 514

Query: 113 EKFQECMSQNVDTSRVMPSEK-------EVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKY 172
           ++FQ+ +SQ   TS    +         E+Y QVMG E  G VRG G GPTPT VF +  
Sbjct: 515 DQFQQLLSQPDGTSFSTSASSGASTYVDEIYTQVMGPERHGHVRGYGFGPTPTLVFGSTS 574

Query: 173 HQCVGAEITSETSMENHEAVEERSRLTKLESEMVDMRYLL 204
            +  GA ++++        +    + T    E+ +++Y L
Sbjct: 575 RRRSGAILSTQLENAQEMLIAAEQKFTTATEELSNVKYEL 614

BLAST of Lsi10G006930 vs. NCBI nr
Match: XP_016200318.1 (uncharacterized protein LOC107641338 [Arachis ipaensis])

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-10
Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 0

Query: 53  KKNIKNCVCHHYLESG----MAINVIYEEKELGKDPTRVEVFLTAHKLKDGSYMDEEFAK 112
           KKN KN     Y  +G     A  +  E ++ G+   R E+++  HK KDGSYM++E   
Sbjct: 56  KKNAKNRSKQQYTHTGGSKSFARRIEEESEQQGRIVGRGELWIAVHKKKDGSYMNDEARA 115

Query: 113 VVEKFQECMSQNVDTSRVMPSEKEVYEQVMGKEHSGRVRGMGLGPTPTEVFKTKYH---Q 172
           + E+ +E + Q  ++SRV+ S+ +   QV GKE  GRVRG+G GPTP+++F    H    
Sbjct: 116 IGERIEE-IEQQDESSRVL-SQNDSIAQVFGKEKPGRVRGVGFGPTPSQLFGPNSHGYGN 175

Query: 173 CVGAEITSETSMENHEAVE-ERSRLTKLESEMVDMRYLLRRLFNLIPAVVKTAAI 220
            V  E T +  +E    +E E+ +   +E E    +  ++ + + +  ++KTAAI
Sbjct: 176 GVQLEETQKKLLELEGQLEGEKLKRKAMEDEAAADKKKMKAMESALIYLLKTAAI 228

BLAST of Lsi10G006930 vs. NCBI nr
Match: XP_019255521.1 (PREDICTED: uncharacterized protein LOC109234124 isoform X1 [Nicotiana attenuata])

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-10
Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 0

Query: 79  ELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQN-VDTSRVMPSEKEVYEQV 138
           E G+ P R +++L  HK +DG+Y++E   K+ EK +  +SQ+ VD S V P+  +   +V
Sbjct: 3   ETGRRPRRAQLYLDTHKKQDGTYVNEAAKKICEKIELSLSQSTVDESEVSPN--DAVGKV 62

Query: 139 MGKEHSGRVRGMGLGPTPTEVFK-TKYHQCVGAEITSETSMENH 181
           +GKEHSGRVR +GLG  P++VFK  + H C     +S+ S  NH
Sbjct: 63  LGKEHSGRVRCLGLGAIPSKVFKHARPHFCGMNASSSDASCLNH 104

BLAST of Lsi10G006930 vs. NCBI nr
Match: XP_016494961.1 (PREDICTED: uncharacterized protein LOC107814136 isoform X1 [Nicotiana tabacum] >XP_016494962.1 PREDICTED: uncharacterized protein LOC107814136 isoform X1 [Nicotiana tabacum])

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-10
Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 0

Query: 79  ELGKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQN-VDTSRVMPSEKEVYEQV 138
           E G+ P R++++L  HK +DG+Y++E   ++ EK +  +SQ+ VD S V+P+  +   +V
Sbjct: 55  ETGRRPGRIQLYLDTHKKQDGTYVNEAAKEICEKIELALSQSMVDESEVLPN--DAVGKV 114

Query: 139 MGKEHSGRVRGMGLGPTPTEVFK-TKYHQCVGAEITSETSMENH 181
           +GKEHSGRVR +GLG  P++VFK T+   C     +S+ S  NH
Sbjct: 115 LGKEHSGRVRCLGLGAVPSKVFKHTRPRFCGMNASSSDASCLNH 156

BLAST of Lsi10G006930 vs. TAIR 10
Match: AT1G40087.1 (Plant transposase (Ptta/En/Spm family) )

HSP 1 Score: 50.1 bits (118), Expect = 3.0e-06
Identity = 36/119 (30.25%), Postives = 53/119 (44.54%), Query Frame = 0

Query: 81  GKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQNVD-TSRVMPSEKEVYEQVMG 140
           GK P R E F+ + K  DGS++ +E     E     ++ N   T     S  + Y QV G
Sbjct: 225 GKTPCRAEFFIESRKKHDGSFVSDEAKLRAEALTTLLNLNPQVTYNGTASLDDEYSQVFG 284

Query: 141 KEHSGRVRGMGLGPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVD 199
            E  GRVR +G GPTP+ + +        +  T    +EN E V +     K   + V+
Sbjct: 285 PERPGRVRCVGRGPTPSRLVR-------HSNATRRQDIENSELVAQLKTQVKTLGDQVN 336

BLAST of Lsi10G006930 vs. TAIR 10
Match: AT3G30200.1 (Plant transposase (Ptta/En/Spm family) )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 35/119 (29.41%), Postives = 52/119 (43.70%), Query Frame = 0

Query: 81  GKDPTRVEVFLTAHKLKDGSYMDEEFAKVVEKFQECMSQNVD-TSRVMPSEKEVYEQVMG 140
           GK P RVE F+ + K  DGS++ +E           ++ N   T     S  + Y QV G
Sbjct: 345 GKTPCRVEFFIESRKKHDGSFVSDEAKLRAIALTTLLNLNPQVTYNGTASLDDEYSQVFG 404

Query: 141 KEHSGRVRGMGLGPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVD 199
            E  GRV  +G GPTP+ + +        +  T    +EN E V +     K   + V+
Sbjct: 405 PERPGRVHCVGRGPTPSRLVR-------HSNATRRKDIENSELVAQLKTQVKTLGDQVN 456

BLAST of Lsi10G006930 vs. TAIR 10
Match: AT1G42700.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold; LOCATED IN: nucleus; BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 4.9e-04
Identity = 33/108 (30.56%), Postives = 55/108 (50.93%), Query Frame = 0

Query: 95  KLKDGSYMDEEFAKVVEKFQECMSQNV-DT--SRVMPSEKEVYEQVMGKEHSGRVRGMGL 154
           K +DG   +E     +EK  + + QN  DT  +   P+  + + QV G+E  GRVR +GL
Sbjct: 8   KTQDG---EENLKCSLEKLAKKIIQNAGDTNGNNSTPNSNDDFAQVFGRERPGRVRCVGL 67

Query: 155 GPTPTEVFKTKYHQCVGAEITSETSMENHEAVEERSRLTKLESEMVDM 200
           GPTP+   + +         T+ T  +  E +   +R+ +LE ++V M
Sbjct: 68  GPTPSSFIQNR---------TTTTLSKEQEVLSLNNRVRELEDKLVKM 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A438CKK32.4e-1129.38Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_097576 PE=4 SV=1[more]
A5AQY24.2e-1131.25Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042244 PE=4 SV=1[more]
A0A1S4C1D97.1e-1141.35uncharacterized protein LOC107814136 isoform X1 OS=Nicotiana tabacum OX=4097 GN=... [more]
A0A6P4D9W79.3e-1138.79uncharacterized protein LOC107478310 isoform X1 OS=Arachis duranensis OX=130453 ... [more]
A0A6P4DAP99.3e-1138.79uncharacterized protein LOC107488820 OS=Arachis duranensis OX=130453 GN=LOC10748... [more]
Match NameE-valueIdentityDescription
RVW23753.15.0e-1129.38hypothetical protein CK203_097576 [Vitis vinifera][more]
CAN73688.18.6e-1131.25hypothetical protein VITISV_042244 [Vitis vinifera][more]
XP_016200318.11.1e-1033.14uncharacterized protein LOC107641338 [Arachis ipaensis][more]
XP_019255521.11.5e-1042.31PREDICTED: uncharacterized protein LOC109234124 isoform X1 [Nicotiana attenuata][more]
XP_016494961.11.5e-1041.35PREDICTED: uncharacterized protein LOC107814136 isoform X1 [Nicotiana tabacum] >... [more]
Match NameE-valueIdentityDescription
AT1G40087.13.0e-0630.25Plant transposase (Ptta/En/Spm family) [more]
AT3G30200.13.4e-0529.41Plant transposase (Ptta/En/Spm family) [more]
AT1G42700.14.9e-0430.56FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold; LOCATED... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004252Probable transposase, Ptta/En/Spm, plantPFAMPF03004Transposase_24coord: 55..155
e-value: 5.0E-18
score: 65.6
NoneNo IPR availablePANTHERPTHR33144:SF16OS10G0409366 PROTEINcoord: 73..203
NoneNo IPR availablePANTHERPTHR33144OS10G0409366 PROTEIN-RELATEDcoord: 73..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G006930.1Lsi10G006930.1mRNA