Lsi10G006600 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGTTTACAAAACTTCAACAATCATTGTTATAAGAACATAAGAAGACTACTGAACTGATAAGCAGGCCTACAGGATAGGAAGAAATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGGTCTGAATACTTCTCTTTTTCTTTTCTTTCAAATTTAGTTTCGAAAGCATAGGCTTTCCAACCCCAATTTAATTTTTTTTTTAAAAAAAAAACTCTCAAAACTTTATACCGCCCACCGAACTAGAGTTAGTATATCAAGTTTAAAGTGCATCAAATTGAGATGATTAAAAATCAAATGTATAGTCTTCTTAAACAGGACTTAGAGCCTCATCACTTTCTTGAACATTTTTAATTTGGTCGGAAAAACTACTCTTCTAAGATTTATTTGTTTATTTTTGGCAGCTGAATATGCAGAAATGCCTTTCAGTAAAGCATATTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTACCAATCAAATCAATCAAACTAATTTTTTTTTCTTTTTTTTTTCCTCTGCTGAATTTAATGCATAATTTGTTTGGTTTTTCCAGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGTTTAAATTATACAAAATTATCTTTTAAGCTAAATTTTAAAAAATAGTTCTAAATGAATTTTTATAACTAAGTGAACTTAGAATTAAAATACTTCAACAAAAATTGTATGTGAGTAGTTAAGTTGTGAGTTAATACACGCTTGAGTTAAATACACAAAAAGAGAAAGAAAGTTCAGAATTTTGTGTCATAAATAATTTGAGTACTGTTGATGCAAAATTTGGGACAGGAGAAACGCACCTAACCCTCGCGTGACATCAATACAGTTGAATTTGTAATTTTAGGAAAAAGAGGACCTACAAAACAAAGAAAATGACTCGATGCCTAAGTCAATAAAAGAATTATAGAATGGGAAAGAACTCAAGAAATTTTTAATTTTCATATCAAGATCAAGATCTATGTCATCTTCCTAGATTTATGTCCAGTTCCAGATCTATATCAAGTTCAAGATCTATCTCAAGTTCCAGACACCTCATATGAAGTTAAATGATGTATTTATAGAGAGAATGAAATGAAGTTTACCTTTTTCTCTTAGAATTGGATGAGATGGGTCTTTCCTTATTCTATATAGGATTAGATCTGATTAGTTGGATAAATTATTTGCTGATACTTAGACTTACTTGAACCAAGTCCACATTATCTTATATTTATCTTCTCGTATCTTTTCTTAATTTGTTTTTGTCTATTTTGTTAGGTCTAAATTCATCCAGAATAAAGACAATAATAGAAGTGATAAGAACAAGAAAAGAAAAGAAAAAAATATGTGATGAACCCTCCAACCATCAAGTTAAATTATTTTGATTTTTGATATTAAATGTGATGTGATTGATGTGAAATAGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGAGCAATATTTCCAAAAGACTTCTTCATTAACAAAGATTCACAACAACATGCTTTTTATTGCCCTTCAAAAATTTGCCAAACAACTCAAAGGATTCAAATTTGCTTTTGTCGATACACACACTTTTCTCCTACAAAGAATACTAAACCCTACCAAATATGGTAACCAATTTCCTTTCCCTATTTCTTTTTACTTTTTTAAATCATTCCACCATAAACAATAAATTCTTAACCATTTAGATCTTATATTTTCAAATTTGTTACAAATTAATCATTCTACTTTAGTAGTAATTTCGTCAATGTGTGTCTCAATCATAAAAAATATCATCAAAGTTAAAAGATTTATTCTTTAAAAATTATAAACACGTTAACTTAATTTTTTTTTGAACGATTTAGAAAAAACACTTTAGTAAAATTAAAAATAGATCACAAGATTTGTTAATTAACTGTCAATTATGTGGAGACTGATTTTTTAAAAAACCCTTTTGCTCCCTGAACTTTAATGAAAGTAACGATTTACTCC GTCGTTTACAAAACTTCAACAATCATTGTTATAAGAACATAAGAAGACTACTGAACTGATAAGCAGGCCTACAGGATAGGAAGAAATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGAGCAATATTTCCAAAAGACTTCTTCATTAACAAAGATTCACAACAACATGCTTTTTATTGCCCTTCAAAAATTTGCCAAACAACTCAAAGGATTCAAATTTGCTTTTGTCGATACACACACTTTTCTCCTACAAAGAATACTAAACCCTACCAAATATGGTAACCAATTTCCTTTCCCTATTTCTTTTTACTTTTTTAAATCATTCCACCATAAACAATAAATTCTTAACCATTTAGATCTTATATTTTCAAATTTGTTACAAATTAATCATTCTACTTTAGTAGTAATTTCGTCAATGTGTGTCTCAATCATAAAAAATATCATCAAAGTTAAAAGATTTATTCTTTAAAAATTATAAACACGTTAACTTAATTTTTTTTTGAACGATTTAGAAAAAACACTTTAGTAAAATTAAAAATAGATCACAAGATTTGTTAATTAACTGTCAATTATGTGGAGACTGATTTTTTAAAAAACCCTTTTGCTCCCTGAACTTTAATGAAAGTAACGATTTACTCC ATGAAGATTTCAAATTTGGGAAGATGCTTCTTCTTCGTCTTCTTCTTCTTCTACATCTTCATCTTGTTTGGAATTGCAGCAGCCCAAAGCAGTTCTCGAAAAATCCAATTGCCCGACGATGTTTTGTCGTCGGGAAAGCAATTCGGGTTTTTCATATTCGGAGATTCTTATGTGGATGTTGGAAACAACAACTACATCAACGCCACCAGTGATGGTCAAGCCAATTTTCTGCCCTATGGCGAAACCTTCTTCCCTATCCCAACCGGCCGTTTTTGTGATGGCCGTATTATACCTGATTTCTTAGACCCTAACAACAATAACTATATGAATGGTGTGAATTTTGGATCTGGTGGAGGTGGAGCCTTAGTTGAGACAAATCAACAATGGGTCGGTATAGGGCTTAAAACTCAAATGAAATTCTTCCAAGAAGTGGAGAAATCACTGAGAAAGAAGCTGGGGAATGAAAGTTCTCAAAGATTCCTCTCTAATTCTGTGTTTTTCTTCATGTTTGGAGGAAATGATTACCAAAATCCTTTCGACATTAGCTATGATATCTTCAAAACCATTGAAGCTCAAGAACAGTACGTCAATATGGTGATCGGAAATATAACGATAGCTCTCAAGGTAATCTCTTCCGTGTCAAAATATGTTGGAAGTATACAATTATGGAGGAAGGAAATTTGGGATTATGGCATTGGCTCCCACAGGTTATCTGCCATATGCGAGAAGGAAAAGAAGTGA MKISNLGRCFFFVFFFFYIFILFGIAAAQSSSRKIQLPDDVLSSGKQFGFFIFGDSYVDVGNNNYINATSDGQANFLPYGETFFPIPTGRFCDGRIIPDFLDPNNNNYMNGVNFGSGGGGALVETNQQWVGIGLKTQMKFFQEVEKSLRKKLGNESSQRFLSNSVFFFMFGGNDYQNPFDISYDIFKTIEAQEQYVNMVIGNITIALKVISSVSKYVGSIQLWRKEIWDYGIGSHRLSAICEKEKK Homology
BLAST of Lsi10G006600 vs. ExPASy Swiss-Prot
Match: H6U1I8 (GDSL lipase OS=Tanacetum cinerariifolium OX=118510 GN=GLIP PE=1 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.7e-33 Identity = 83/189 (43.92%), Postives = 118/189 (62.43%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy Swiss-Prot
Match: Q9FLN0 (GDSL esterase/lipase 1 OS=Arabidopsis thaliana OX=3702 GN=GLIP1 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.4e-32 Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy Swiss-Prot
Match: Q9SSA7 (GDSL esterase/lipase 5 OS=Arabidopsis thaliana OX=3702 GN=GLIP5 PE=2 SV=2) HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30 Identity = 89/216 (41.20%), Postives = 121/216 (56.02%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy Swiss-Prot
Match: Q9SYF5 (GDSL esterase/lipase 3 OS=Arabidopsis thaliana OX=3702 GN=GLIP3 PE=2 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 2.5e-29 Identity = 85/206 (41.26%), Postives = 113/206 (54.85%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy Swiss-Prot
Match: Q9SYF0 (GDSL esterase/lipase 2 OS=Arabidopsis thaliana OX=3702 GN=GLIP2 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.4e-29 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy TrEMBL
Match: A0A6J1EJ18 (GDSL esterase/lipase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434897 PE=3 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64 Identity = 142/223 (63.68%), Postives = 159/223 (71.30%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy TrEMBL
Match: A0A6J1I3Y7 (GDSL esterase/lipase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470363 PE=3 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 7.2e-64 Identity = 141/223 (63.23%), Postives = 159/223 (71.30%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy TrEMBL
Match: A0A6J1EIS0 (GDSL esterase/lipase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111434936 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63 Identity = 143/229 (62.45%), Postives = 161/229 (70.31%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy TrEMBL
Match: A0A0A0LJN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296100 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 2.3e-62 Identity = 137/224 (61.16%), Postives = 163/224 (72.77%), Query Frame = 0
BLAST of Lsi10G006600 vs. ExPASy TrEMBL
Match: A0A6J1KYX0 (GDSL esterase/lipase 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499513 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.7e-60 Identity = 137/231 (59.31%), Postives = 159/231 (68.83%), Query Frame = 0
BLAST of Lsi10G006600 vs. NCBI nr
Match: XP_038901398.1 (GDSL lipase-like isoform X1 [Benincasa hispida]) HSP 1 Score: 305.4 bits (781), Expect = 4.3e-79 Identity = 167/223 (74.89%), Postives = 177/223 (79.37%), Query Frame = 0
BLAST of Lsi10G006600 vs. NCBI nr
Match: XP_038901400.1 (GDSL lipase-like isoform X3 [Benincasa hispida]) HSP 1 Score: 305.4 bits (781), Expect = 4.3e-79 Identity = 167/223 (74.89%), Postives = 177/223 (79.37%), Query Frame = 0
BLAST of Lsi10G006600 vs. NCBI nr
Match: XP_038901399.1 (GDSL esterase/lipase 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 295.4 bits (755), Expect = 4.4e-76 Identity = 161/215 (74.88%), Postives = 172/215 (80.00%), Query Frame = 0
BLAST of Lsi10G006600 vs. NCBI nr
Match: KAG6571388.1 (GDSL lipase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258.1 bits (658), Expect = 7.9e-65 Identity = 139/221 (62.90%), Postives = 160/221 (72.40%), Query Frame = 0
BLAST of Lsi10G006600 vs. NCBI nr
Match: XP_023512753.1 (GDSL esterase/lipase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.5 bits (654), Expect = 2.3e-64 Identity = 137/210 (65.24%), Postives = 157/210 (74.76%), Query Frame = 0
BLAST of Lsi10G006600 vs. TAIR 10
Match: AT5G40990.1 (GDSL lipase 1 ) HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33 Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0
BLAST of Lsi10G006600 vs. TAIR 10
Match: AT1G53920.1 (GDSL-motif lipase 5 ) HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31 Identity = 89/216 (41.20%), Postives = 121/216 (56.02%), Query Frame = 0
BLAST of Lsi10G006600 vs. TAIR 10
Match: AT1G53990.1 (GDSL-motif lipase 3 ) HSP 1 Score: 130.6 bits (327), Expect = 1.8e-30 Identity = 85/206 (41.26%), Postives = 113/206 (54.85%), Query Frame = 0
BLAST of Lsi10G006600 vs. TAIR 10
Match: AT1G53940.1 (GDSL-motif lipase 2 ) HSP 1 Score: 128.6 bits (322), Expect = 6.7e-30 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 0
BLAST of Lsi10G006600 vs. TAIR 10
Match: AT3G14225.1 (GDSL-motif lipase 4 ) HSP 1 Score: 109.8 bits (273), Expect = 3.2e-24 Identity = 73/211 (34.60%), Postives = 108/211 (51.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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