Lsi10G005470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G005470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1685)
Location	chr10: 7855991 .. 7857917 (+)
RNA-Seq Expression	Lsi10G005470
Synteny	Lsi10G005470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTATTAACGGAAAAAAAGAAAAATCCAAAAAAAAAAAAAAGCCATAGAGCCCTCCGGCAAGGTCACCGGCCATCCGGCCATCCCCAACGGCGGGGCTGTGTCGGGTGTCCCATCAAAACCCACATCCACCATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGTATTCAATTCTTTCCCTCAATTTCCCTTTTTTTTTTTTCCATTTTTTTTCCATTTTTTTTACTTTATATTATATATTTTAGCTTATAACTGTGGTTTGATTACTTCTCAATTTTGTCTCATGAATGCCTACATTTTAAAAAATATCTAAAAAAAAGGTTTCGTCAATTGCAAAAATTGAGTTATCAAACTTATATAAGAGTTAAAATTAGACTCTTAAACTTAAATAATTGTAAAAATTACAACCAATAAATAAATTTGTGGGTTCAATATCATTTGAAGGTCTAATTTCTTGTAAGTTTGAGTATCTAATTTTAATAGTTGTATAAGTTTGAGGGCTTAATTTTTACAATTGAAAGTTTAAGGCTATAATTGCAACTACTATCATATTTCAGGGGTAATTTTTACAATTTTACCTTAAATTTTTAATTTTGTGTTTAATAGATCTTAGGTATTGAATTTTTTATAGAACATTAAATAATCTTATTACACATTTGCATTTTATAAAAGTTAGAATAGGTCAAAAGATGTATGGGAACATAATTGAATGACCAATTGAATGAGTCTTGGACAAAAAAAAATTGAATGTCTAAAGACTTATTAGATGTTTTTTAGGTTTAAATACTATGGTATATGTACTTTCAACTTTGGTTCATTTTAGTCCGTATACATTAAGATATCCATTTTGCTTTCTTTATTTTTAAAAAGTGATCATTATGACCTCTTCATTTTCATTTCCATTTTATTTTTAAGGAGATCAAAATGACTACTTTTTAAAAGTACAAGACTAAAATGAACTAAAGTTGAAAATATAAACACCAAAATGAACCGAAATGGAAAGTACATGAACCAAAGTAGTCTTACTTAAACATACTTCTTAAAGTTCAATATCAAATAAATACAAACCTAAAAATACAAAAATCTACTCAACATTTTAAACTTTAGAGAACCAAACAAATATGACTTCAAAGATTTAACGACTAAACTTATAATTCAACTAAGATTTTAAGTGTAATTATACAACTATGGGTGTGTGTTTTTAAGTTATCTATAAACTCATGGAGTTACTTACAAGAACCTTCATAGGAAAAAGTTAAAAGGCAAGTAGTAATAGCAAAAGAATAGTAATTAATGGACGACAATTTTGAAGTTTTGTATAAACATATGTGGAATTACTTGTTTATTTGGATGGTTAATTGTTTTTTTTTTTTTTTTTTCTTGTAACCTAATAATAGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAAATAATAAATATCTTTAATTATTAACCACCATGGTTAATCTAAACTAAACCATAGTTTCAAATTTGCAAATGGGC

mRNA sequence

CTCTTATTAACGGAAAAAAAGAAAAATCCAAAAAAAAAAAAAAGCCATAGAGCCCTCCGGCAAGGTCACCGGCCATCCGGCCATCCCCAACGGCGGGGCTGTGTCGGGTGTCCCATCAAAACCCACATCCACCATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAAATAATAAATATCTTTAATTATTAACCACCATGGTTAATCTAAACTAAACCATAGTTTCAAATTTGCAAATGGGC

Coding sequence (CDS)

ATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAA

Protein sequence

MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

Homology

[Close]

BLAST of Lsi10G005470 vs. ExPASy TrEMBL
Match: A0A0A0LJJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277000 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLE 60
           +SE Y  PPPPP KA LIPT LY+Q SWSPDASREEAWQ RRKGRSKKERN+S+TAEDLE
Sbjct: 12  VSEPYT-PPPPPGKAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLE 71

Query: 61  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 120
           ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSDSISKS+N TAFSSPDRD +N
Sbjct: 72  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYIN 131

Query: 121 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 SPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

[Close]

BLAST of Lsi10G005470 vs. ExPASy TrEMBL
Match: A0A5A7TQF7 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003150 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDL 60
           +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  EELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSL 120
           EELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YSDSISK  N TAFSSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of Lsi10G005470 vs. ExPASy TrEMBL
Match: A0A1S3C5W7 (uncharacterized protein LOC103497396 OS=Cucumis melo OX=3656 GN=LOC103497396 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDL 60
           +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  EELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSL 120
           EELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YSDSISK  N TAFSSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of Lsi10G005470 vs. ExPASy TrEMBL
Match: A0A6J1G638 (uncharacterized protein LOC111451175 OS=Cucurbita moschata OX=3662 GN=LOC111451175 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 133/161 (82.61%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEE 60
           MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+E
Sbjct: 1   MSESYA-PPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDE 60

Query: 61  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNS 120
           LKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YSDSISKS+ TTA SSPDRDS+NS
Sbjct: 61  LKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNS 120

Query: 121 PSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           PSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Sbjct: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of Lsi10G005470 vs. ExPASy TrEMBL
Match: A0A6J1L6N5 (uncharacterized protein LOC111499661 OS=Cucurbita maxima OX=3661 GN=LOC111499661 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 131/161 (81.37%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEE 60
           MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+E
Sbjct: 1   MSESYA-PPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDE 60

Query: 61  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNS 120
           LKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YS+SISKS+ TTA SSPDRDS+NS
Sbjct: 61  LKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSNSISKSTATTAVSSPDRDSVNS 120

Query: 121 PSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           PSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACS++NSST
Sbjct: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSLRNSST 160

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: XP_004149707.1 (uncharacterized protein LOC101213862 [Cucumis sativus] >KGN61958.1 hypothetical protein Csa_006277 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 5.3e-70
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQ-RRKGRSKKERNQSVTAEDLE 60
           +SE Y  PPPPP KA LIPT LY+Q SWSPDASREEAWQ RRKGRSKKERN+S+TAEDLE
Sbjct: 12  VSEPYT-PPPPPGKAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLE 71

Query: 61  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 120
           ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSDSISKS+N TAFSSPDRD +N
Sbjct: 72  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYIN 131

Query: 121 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 SPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: XP_008457792.1 (PREDICTED: uncharacterized protein LOC103497396 [Cucumis melo] >KAA0045793.1 Membrane insertase YidC [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69
Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDL 60
           +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  EELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSL 120
           EELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YSDSISK  N TAFSSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: XP_038902790.1 (uncharacterized protein LOC120089408 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 5.0e-68
Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 7   PPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLE 66
           P   P +KA LIPT LYKQRSWSPDASREEAWQRRKGRSKKER +SVTAEDLEELKACLE
Sbjct: 4   PNALPLRKAELIPTALYKQRSWSPDASREEAWQRRKGRSKKERKRSVTAEDLEELKACLE 63

Query: 67  LGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGS 126
           LGFGFESPELDSRLSNT PAL LYHAVNKNY+DSISKS+NTTAFSSPDRD LNSPSPLGS
Sbjct: 64  LGFGFESPELDSRLSNTFPALELYHAVNKNYNDSISKSANTTAFSSPDRDYLNSPSPLGS 123

Query: 127 PLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           PLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 124 PLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 158

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: XP_022947253.1 (uncharacterized protein LOC111451175 [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 5.1e-65
Identity = 133/161 (82.61%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEE 60
           MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+E
Sbjct: 1   MSESYA-PPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDE 60

Query: 61  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNS 120
           LKACLELGF F+S ELD+RLSNTLPAL LYHAVNK+YSDSISKS+ TTA SSPDRDS+NS
Sbjct: 61  LKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNS 120

Query: 121 PSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           PSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Sbjct: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: XP_023521262.1 (uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo] >XP_023521263.1 uncharacterized protein LOC111785011 [Cucurbita pepo subsp. pepo] >XP_023532572.1 uncharacterized protein LOC111794695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 132/161 (81.99%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEE 60
           MSE YA PPPPP+K   +PT LYKQRSWSPDASREEAWQR+KGRSKK R++SVTAEDL+E
Sbjct: 1   MSESYA-PPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDE 60

Query: 61  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNS 120
           LKACLELGF F+S ELD+RL+NTLPAL LYHAVNK+YSDSISKS+ TTA SSPDRDS+NS
Sbjct: 61  LKACLELGFEFDSSELDTRLTNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNS 120

Query: 121 PSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           PSPLGSPLAI GSSG+NP+ VKTKLRQWAQVVACSV+NSST
Sbjct: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of Lsi10G005470 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 85/165 (51.52%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGR---SKKERNQSVTAED 60
           MS+  AP   PP+        L KQ SWSPDA REEAW R+KG+    +  R++SVT ED
Sbjct: 1   MSKRNAPFQAPPRP-------LVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDED 60

Query: 61  LEELKACLELGFGFE--SPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           LEELK C+ELGFGFE  SP+LD RLS TLPALGLY AVNK YS  +S++S+ ++ +S   
Sbjct: 61  LEELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGE 120

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           +S +S + +          G++P+T+K +L+QWAQVVACSVK  S
Sbjct: 121 NSNSSTTIV--------DQGDDPETMKLRLKQWAQVVACSVKQFS 150

[Close]

BLAST of Lsi10G005470 vs. TAIR 10
Match: AT3G50350.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-29
Identity = 74/142 (52.11%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 22  LYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTAEDLEELKACLELGFGFESPE-LD 81
           L  Q SWSPD  REEAW +R+  S+     R +S+T EDL+ELKA  ELGFGF SPE  D
Sbjct: 35  LNTQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGFGSPENAD 94

Query: 82  SRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGEN 141
            RLSNTLPAL LY AV K+Y+D++S  S T++ S  D D+        SP      + ++
Sbjct: 95  PRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDT--------SPHHTVYQTSDD 154

Query: 142 PKTVKTKLRQWAQVVACSVKNS 160
           P+TVKTKL+QWA+VVAC+V  S
Sbjct: 155 PQTVKTKLKQWARVVACTVNQS 168

[Close]

BLAST of Lsi10G005470 vs. TAIR 10
Match: AT2G15590.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAED 60
           MS H AP PP P         L KQ SWSPD SREEAW R+K +   +   R++SVT +D
Sbjct: 1   MSNH-APQPPRP---------LMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDD 60

Query: 61  LEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           +EELK C ELGFGF  ESP+L+ RLS+T+PAL LY AV++ YS+ +S+   T++F+S D 
Sbjct: 61  IEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSR---TSSFAS-DH 120

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           +  NS     + +      G++ KT+K KL+QWA+VV  SV++SS
Sbjct: 121 EVSNS-----NNITTIVDKGDDRKTMKQKLKQWAKVVGFSVRHSS 146

[Close]

BLAST of Lsi10G005470 vs. TAIR 10
Match: AT3G50350.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 0


Query: 8   PPPPPQKAGLI---------PTGLYKQRSWSPDASREEAWQRRKGRSKK---ERNQSVTA 67
           PPP     G++          T L KQ SWSPD  REEAW +R+  S+     R +S+T 
Sbjct: 16  PPPHTPSPGVVRRIHAPPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTD 75

Query: 68  EDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPD 118
           EDL+ELKA  ELGFGF SPE  D RLSNTLPAL LY AV K+Y+D++S  S T++ S  D
Sbjct: 76  EDLDELKASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSD 135

[Close]

BLAST of Lsi10G005470 vs. TAIR 10
Match: AT2G15590.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 59/111 (53.15%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAED 60
           MS H AP PP P         L KQ SWSPD SREEAW R+K +   +   R++SVT +D
Sbjct: 1   MSNH-APQPPRP---------LMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDD 60

Query: 61  LEELKACLELGFGF--ESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSN 107
           +EELK C ELGFGF  ESP+L+ RLS+T+PAL LY AV++ YS+ +S++S+
Sbjct: 61  IEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSS 101

The following BLAST results are available for this feature:

BLAST of Lsi10G005470 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G005470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJJ4	2.6e-70	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277000 PE=4 SV=1	[more]
A0A5A7TQF7	1.7e-69	87.73	Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C5W7	1.7e-69	87.73	uncharacterized protein LOC103497396 OS=Cucumis melo OX=3656 GN=LOC103497396 PE=...	[more]
A0A6J1G638	2.5e-65	82.61	uncharacterized protein LOC111451175 OS=Cucurbita moschata OX=3662 GN=LOC1114511...	[more]
A0A6J1L6N5	2.1e-64	81.37	uncharacterized protein LOC111499661 OS=Cucurbita maxima OX=3661 GN=LOC111499661...	[more]

BLAST of Lsi10G005470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149707.1	5.3e-70	88.89	uncharacterized protein LOC101213862 [Cucumis sativus] >KGN61958.1 hypothetical ...	[more]
XP_008457792.1	3.4e-69	87.73	PREDICTED: uncharacterized protein LOC103497396 [Cucumis melo] >KAA0045793.1 Mem...	[more]
XP_038902790.1	5.0e-68	90.32	uncharacterized protein LOC120089408 [Benincasa hispida]	[more]
XP_022947253.1	5.1e-65	82.61	uncharacterized protein LOC111451175 [Cucurbita moschata]	[more]
XP_023521262.1	1.1e-64	81.99	uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo] >XP_023521263....	[more]

BLAST of Lsi10G005470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33985.1	1.9e-33	51.52	Protein of unknown function (DUF1685)	[more]
AT3G50350.2	6.3e-29	52.11	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	3.5e-27	47.88	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	2.2e-21	50.41	Protein of unknown function (DUF1685)	[more]
AT2G15590.1	1.4e-20	53.15	Protein of unknown function (DUF1685)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 53..107 e-value: 3.6E-25 score: 87.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..54
None	No IPR available	PANTHER	PTHR31865:SF1	INSERTASE, PUTATIVE (DUF1685)-RELATED	coord: 4..158
None	No IPR available	PANTHER	PTHR31865	OSJNBA0071G03.3 PROTEIN	coord: 4..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005470.1	Lsi10G005470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane