Lsi10G005450 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G005450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CLK4-associating serine/arginine rich protein isoform X1
Location	chr10: 7831112 .. 7837176 (-)
RNA-Seq Expression	Lsi10G005450
Synteny	Lsi10G005450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAGAGCCAATCTCAGTCCAAAGACCGAACCTTCTCTATGCCATTGAAGCACAGTAGACCGTCTTCGTCATCGAGAACTTGGTAGTTCCATGAGGAGAGAAGGGGATTAGGGTTTTTCCATCTTCCCGATTCGATCGAAATCGCTTGGAATTCGCATTGTTCCTTTCCAGAGATGTGGCACGAGGCGAGGAGATCCGAAAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGACGTGCTGTTTTTCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTTGTTGGAACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTGAGGACCAGCAAGGCCTGTAAGAATTTTATATTTCATCTCTCTGCATTAGATATAAAAAAAAAACTGGGTATATTACGAATTGGGGTTTTTTTTCGGTGTTATAGATATTGGAGCTGGCTGATGTTGTCAGCTTCTTTTTTACTTCAGTATAAAATTCTTAAATTATTCGAATTGCTGCAATTTGTATGCCTTTTGGGAATTCGCCAGTTGGGCTTAACTGCATCACTATATCCTGAAACTTGTTTCTTCTTCGCTTTGTTCATTGCGTAGATTAAAACGAAAGACGATGTATTTGTTTGCGGATGAATAGAAATTTAGGATTTAATCGCAGGAGGTTCTTTAAAATTTTAACCCTCCAGCCCATGATTGATACACGCAAATTTTTTGTTATATTAGATCATTTGTGGACAAATTTGTCAATTGTTAGAACTTGTTTTATTAGTTCGGTGGCATTGTTGTTTTTGAGCATCCAGACATCCACTTCATCTTAATTCTTGACCCTTTTGGGATTTTTGTTGCAACTTCTGTCTACAGGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGATAGGTTCATTTCTTTTAATCATCTGACGACTGTTTGATTTTAAGTTTGTTGCTTGGTTAAATATTTATGATTTGAGGTGAGGAGTAGGTTTTCATTTCTTGAGCAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCTGGATCCCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATGTGGGTACTTCTTTTTACTTTTATCGACCTCTTAAACCTTTAACAGTTCAATGCACAAACCCACTAGCTTTCCTTATTTGATGAGCAATAAGGGCAAAGGTTATTTTTATTTGTATATATATTTTTTACACCGATGTAAATATTTAACAGAGCTCTCTACAATTCTATGTCAACAGTTAATGATGAGGATGGTTTACAACATGTAAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTTGTATCTGATAGGTTTCTCTCTTCTGCTCTCTCTCTCTCTCTATACACACACACACACACTTATATACATATAGGACGGACATGGAAAAATATGTTGTCCTAATTTTCCTAGTTCACATCTTTCTAATTGTCTAGAAGTTGTCTCTCTCAGTCACTCTAAACTGTGAGGTGGTTTGGGTTTTGGAAATTTAATATCCATACCTTTATCCTCCTTTTGTAGAATTAAATTTCTGTTCAATTTTTTTCCTTTTACAAAATCATCACCTGCATTTAGCATTTCAACCAAACAAGAAGTCATTTACATTATATTATTGGAAGGCGGTGGGGTTGTAGAGGGAAAAAAAACAATGAAGTATGTCTACTTTTTAATTAACAAGCTGTTGGAAAATGGTGCCACCACCACCTTCATCATCATTCTTAATTCTTCTCCTGAAATTTCTACTACACTTGGAATACCCATAATCATATTTTCACGTCAATACATGCGTTTATTTAAACTTCTAAGTTCTAAGTCAATAGCCCTTTAATTTTATCTAATCTATCCAACATTACTAGGAACCATGACCACCTCAGCTTCCCAAATGCTCCTTCAAGTTCCATCTTTTCAATTTCGACGAAGTCTCCAATTCCTAATCACCTCACTTACAAAGTGTGGACAACTCGATAGGACCACATAAGTATGGAAAATATTCATATTCAATGTACACCGATTCCTTACATGTTCTTCAAAGCCCTCCCAAATCTTGTACTAATCATCACGGAAACATTGTTTAGTGATGACTACTGTTCTCTTTCACCTTATTTTATTTTTATTAAACCTAAGTTTCACCTTGACATTACTATTCAACCCCTCTAACAATTCCCCATCACCGATTTGCCTCTTGAGGTCTCCCAAGCACAAACCACCAACTGCCGTTCAAATGATTTTACTCATATTGGTGTGTTTTCATGTTGAGACATTGTACCTGTCAGAGTGAATTATTTTTTAGATCATTACAATTTTTTGGGGTGTCCATTTCTACTTTGCTCTAAATTCTTGTTCTACTTTTCATTTTCTTTTGTTCTCTATAATTTTCTTTTTATTTCACGTTAGTTTTATGGGTGGAATTGCTGCTGTTGAATTTTATTTAGTTTTTTATGGTATTTCTTGTGCGTACATGAAGATCTCAGCAACCACAGCCTCCTGCAAGCAAGGGATCATACTCGCAAGTGGGGTTTTCTTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCTGATGATAATGCTAGTGATGATGAAGATGATGAGGACGATGAGGATGAGGATTTTCACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATAGCAAAAGAGTTCGGAGTGAAAAGATACGGATGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAGAAGAGGCAAAAAGAAATAATCAAAGGTGATCCTGCAATTGTAAGTCACTTCCATCATTGCCTCAGAAAAATACCACGTTTGTTTCAGCTCTCTGATAGTCAAATGTCTCATAAATGTAAAATCTGAAACTATTAGAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAATTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGGTATAAAGATAAAATTTTCTTTGCATGATATGAAGAGGATAAGAATTCACTTTTTTTTTCTCATTGAAAAAAAAGGATAAGAATTCTGTTTTTTGTTCACTGGTATGATATGGCAGTTGATTTTATGAGCAATAATCATGTATTCTATTTTCACATGTAGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGGTAAGTCTATTGAGTTATGATCGAACTCAAGACTTCCTAGCGGGGTTTGTGGATCCTATGGACAAAACTGGATTTTTTAAATTACTATTCTTTTTTTTGGAGGATTTTTATATTACTATTATATCCTGTTATTCTACAGATCAAGGTCCAGATCACATTCCCCATCACATTCAAGGCATCATTCTCGTGGTCATTTTGATGATGTTCATCGGAGCAAACCAAGGACTCCAAAAATTGAATTCATCACTGAATTTGGGGGATCTGGTGATAGCAAGGAACCGAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGATAAACCGGTCGGAGCACTCGACCTTTCATTATTGTGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTACCTGAGGGTGTGGTTTAGTATAGATCAGGCCTAGGATTTTCAGCGTAACTGCCCACGGCAAGATGGAAGGAGGCTTCCTTTTTGAAGCTCAGATATTCCCTAAAATGGATTTAATATAATCACTAGCAAATGTGCATGGAACTTTTATAATGGGCATCTCTTACCCTTGTGCTTTCATGCAGGCCATCATCTGGTCGGATCCTTGAGGCATTGCATATTGATCCAGCATCTGGCGTGACACTTGATAAAGAAAAGAGCAGCAGAGCAGTAAAACCATCAGTAAGGTATATATGAAGTCTGAATTTACTTTAGTGTCAAGTCCTGTGAACTGATGCTGATTAGTGTTTTAAAAAGTCATCTGTGCAGGTTTAACACCTTGCCTTGGAAAGGGGCGCGCCTTTTGTGAAGCCCTAGGCTCAAAGTTATGAGCCTTGGGGTTTTTTCATTATTTTTGAAAATTAGTAATAATTAGGGCTTTTCCTTCTTTATTACCCAAGAAAAATGAAATTTGCTAAGCCTAAATGAAAATTTCTTGTGTTTAAGGGTCTTTTTCATATTTCCACTTCAACTATGCTTTCTCTTCTTTATGTAGTACCTGTATAGTGTGCCTAAAAAAAAGCCATGTTTTTTTTTCCGCCTTGCGCTTAAGCTCTAAAACACTATTGCACTTTATTGCGCTTGAGCTTTAAAAAACACTGATGCTAAGACATTTCCAATACTAATGTTTGGTGCCTTATGCATGTGAAGTTCATAAAATGAATTATGGGCATTCAAGTCCTTTTATGGGTTTTTGAGTCCTCGTACAATATTTATGGGTTTTTTAGTCCTTGTACTATAATTATGGACATTTTGAGTCGTAGTACAATAATTATGAGTATTTGAATCCAAGTACAATGATTATGGGCGTTTAAGTCCTTCAGCAATAATTATGGACATTTATTTCCTTGAACAGTACGTCGTCAGCACTTGCAAAGTTAACGAAGGCAAGTTCTTCCGGAGGGCCTTTAAAGCAGGGGGAAAAGAAAGAAACTCCACAGGAACGACTTAAGAGGATCATGAGTCAACAGCTTAATAAACAAAGTATGTGTGCATTTTTCATTATGAAGGGTCTTCTCTAAGACCTAAGAAGTACAGACATGCATTGAACAATTTTTTAGGAGTACTAAATAGAAATAGACACGTAATAATATATGACAAAAATAGTAAACTTGGGCACGGAATACGTCAAACTCATTTTTAAGCATATCAATCCATAAAAATTATTCACTATCAATTTTAATATAGTAAAGAAATGATGTATGTTTTTAAAAATGCATATTTTAATAGATGTCCCTATTGTGTCCATGTCCTAGATTTGTAAAAGAAACGTGGCACCACGTTCGAGTTTGTATCATGCCTATCAATGAAGAACTTATGCCTTCTGACCTTATGAATGTTTTGTATGGGAGCCATTTTTATTTCAAGATCTTTTAATATCTTCTCTGGCATATATGGTTGAACAATGGGATGAACCATGCAGTTAAGAAAGATACAGCTGCAGAAATGGCTAAAAAGAGGGAGCAGGAGCGCCAGAGACTGGAAAAGCTGGCGGAAACTAGCCGATTAAATAGTCATAGGCATCGGAGCCGCAGCAGAAGCTACAGCCGTTCTCCGAGAAGGTACTTTTATTTTTTGTTTTGAAGTTTTAACTAAATGATTTATGATCTCAAACTTGGGAGGATTCTTTTTTTTTTTTTTTTAAGACAAGTGGGAGTAGTAATTAACTATACTTTGTTGATTGTTCTGACACCTTATGTCTGTTTAAAGTCTTAAGACTCAACAAATGATTTGATTGATTGCTTCTGCAGAAGATACTGCCGTAGTAGGAGTAGAAGTAGAGGGTCACGAAAATATTATTCTCATTCTCGGTCTCGATCTCGCTCTCGCTCTCGTTCTCAAAGCCGTTCTCGTTCACATTCCCGTTCACCTTCTTACTCTCACTCACCAAGGTATGTATTATTGTCAGTCGTGCTAACACTTTCATCGTGATTGGATAACTTGATGATAAGATGAACCACATATTGCAGGGTTAGGAGCCGTACGAGATATTAAAAAAGGAATGCTGAATCTTTTTCCGGACATTATTTCATTTGACTCTATTTCGCTGAAAATATATATCTATATATGTTATGTTTCTAATCTCGGATGGATGTATTATAATGTGAGCTCCGAATCGGTTCCTTCCTGGAGTTTGGATTAGTCTATATAAAAAATTTCAATGGTCTTAATGTCTGGTGGAAAACTTGTTTATTGTACAAGTTAAGCATAGGGCGGTAATAATAAAAAACAGATCTGTTTTTTTTTTTTTT

mRNA sequence

AAGAAAAGAGCCAATCTCAGTCCAAAGACCGAACCTTCTCTATGCCATTGAAGCACAGTAGACCGTCTTCGTCATCGAGAACTTGGTAGTTCCATGAGGAGAGAAGGGGATTAGGGTTTTTCCATCTTCCCGATTCGATCGAAATCGCTTGGAATTCGCATTGTTCCTTTCCAGAGATGTGGCACGAGGCGAGGAGATCCGAAAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGACGTGCTGTTTTTCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTTGTTGGAACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTGAGGACCAGCAAGGCCTGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGATAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCTGGATCCCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATGTGGAGCTCTCTACAATTCTATGTCAACAGTTAATGATGAGGATGGTTTACAACATGTAAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTTAAGTTGTCTCTCTCAGTCACTCTAAACTGTGAGGTGGACCACATAAGTATGGAAAATATTCATATTCAATGTACACCGATTCCTTACATGTTCTTCAAAGCCCTCCCAAATCTTCAACCACAGCCTCCTGCAAGCAAGGGATCATACTCGCAAGTGGGGTTTTCTTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCTGATGATAATGCTAGTGATGATGAAGATGATGAGGACGATGAGGATGAGGATTTTCACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATAGCAAAAGAGTTCGGAGTGAAAAGATACGGATGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAGAAGAGGCAAAAAGAAATAATCAAAGGTGATCCTGCAATTAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAATTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGATCAAGGTCCAGATCACATTCCCCATCACATTCAAGGCATCATTCTCGTGGTCATTTTGATGATGTTCATCGGAGCAAACCAAGGACTCCAAAAATTGAATTCATCACTGAATTTGGGGGATCTGGTGATAGCAAGGAACCGAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGATAAACCGGTCGGAGCACTCGACCTTTCATTATTGTGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTACCTGAGGGTGTGGTTTAGTATAGATCAGGCCTAGGATTTTCAGCGTAACTGCCCACGGCAAGATGGAAGGAGGCTTCCTTTTTGAAGCTCAGATATTCCCTAAAATGGATTTAATATAATCACTAGCAAATGTGCATGGAACTTTTATAATGGGCATCTCTTACCCTTGTGCTTTCATGCAGGCCATCATCTGGTCGGATCCTTGAGGCATTGCATATTGATCCAGCATCTGGCGTGACACTTGATAAAGAAAAGAGCAGCAGAGCAGTAAAACCATCAGTAAGTACGTCGTCAGCACTTGCAAAGTTAACGAAGGCAAGTTCTTCCGGAGGGCCTTTAAAGCAGGGGGAAAAGAAAGAAACTCCACAGGAACGACTTAAGAGGATCATGAGTCAACAGCTTAATAAACAAATTAAGAAAGATACAGCTGCAGAAATGGCTAAAAAGAGGGAGCAGGAGCGCCAGAGACTGGAAAAGCTGGCGGAAACTAGCCGATTAAATAGTCATAGGCATCGGAGCCGCAGCAGAAGCTACAGCCGTTCTCCGAGAAGAAGATACTGCCGTAGTAGGAGTAGAAGTAGAGGGTCACGAAAATATTATTCTCATTCTCGGTCTCGATCTCGCTCTCGCTCTCGTTCTCAAAGCCGTTCTCGTTCACATTCCCGTTCACCTTCTTACTCTCACTCACCAAGGGTTAGGAGCCGTACGAGATATTAAAAAAGGAATGCTGAATCTTTTTCCGGACATTATTTCATTTGACTCTATTTCGCTGAAAATATATATCTATATATGTTATGTTTCTAATCTCGGATGGATGTATTATAATGTGAGCTCCGAATCGGTTCCTTCCTGGAGTTTGGATTAGTCTATATAAAAAATTTCAATGGTCTTAATGTCTGGTGGAAAACTTGTTTATTGTACAAGTTAAGCATAGGGCGGTAATAATAAAAAACAGATCTGTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTGGCACGAGGCGAGGAGATCCGAAAGGAAGGTCCACGACATGATGGACGCTGCTCGAAAGCGAGCTCAAAGACGTGCTGTTTTTCTCGCCAAGCGCCGTGGCGATCCTCAGCAATCCATCCAGGTTGTTGGAACTCGGTGCCGCGTCTACCGTGACGATGGTCTCTATCAAGCAACTGAGGACCAGCAAGGCCTGATTCCTTGGAATGGAAAGCAGGATGTTATGATTGATAGATTTGATGGACGTGCCCTGCTTGATTTCATTCGAGAACCTGGATCCCGACATATTCGAACACAAGAAAAATCTGAGGAAGAAGAGGAGTTAGAAGAGTTTGTTAATTTTCAGCGTTATCGAGATTTAATTAAGCATCGGCGTCGAGGATGTGGAGCTCTCTACAATTCTATGTCAACAGTTAATGATGAGGATGGTTTACAACATGTAAATCAAGAAATGGAGGCCAAGGTGTCTGCTCCATTTAAGTTGTCTCTCTCAGTCACTCTAAACTGTGAGGTGGACCACATAAGTATGGAAAATATTCATATTCAATGTACACCGATTCCTTACATGTTCTTCAAAGCCCTCCCAAATCTTCAACCACAGCCTCCTGCAAGCAAGGGATCATACTCGCAAGTGGGGTTTTCTTATGAGGCGGATGGGAAGGAGGAATCAAATTCAGATGCTGATGATAATGCTAGTGATGATGAAGATGATGAGGACGATGAGGATGAGGATTTTCACAGTGATGACAGTAATGATGAAGGAATGGAGGTAATAGCAAAAGAGTTCGGAGTGAAAAGATACGGATGGCTTGTTTACATGGATAAAAAGGCTAAGGAGGAAGAGAAGAGGCAAAAAGAAATAATCAAAGGTGATCCTGCAATTAGGAAGCTAAGTCGCAAGGAAAGAAGGAAAGCATCTCAAATGGAACGGGAAAGGGAAAGAGAAGCTGCACGAATTACTGGTACCAGAGTCCTTCATCATGATCCTTACCGAGAATCTAGACGAAGTCCAACTTATGATGCTTATCCACGTTCTAGAAGATCAAGGTCCAGATCACATTCCCCATCACATTCAAGGCATCATTCTCGTGGTCATTTTGATGATGTTCATCGGAGCAAACCAAGGACTCCAAAAATTGAATTCATCACTGAATTTGGGGGATCTGGTGATAGCAAGGAACCGAGGCTAGAAGGACTATCTCCACCACAATCTCCTCCATCTCAGCCTGATATGATAAACCGGTCGGAGCACTCGACCTTTCATTATTGTGAAGATAGATTGGACAATCTTTACTGTGCTGCAGCTTTCTCCCATTTTGTTACCTGA

Protein sequence

MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRDLIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENIHIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDEDDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHSRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINRSEHSTFHYCEDRLDNLYCAAAFSHFVT

Homology

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BLAST of Lsi10G005450 vs. ExPASy Swiss-Prot
Match: A0JNI5 (CLK4-associating serine/arginine rich protein OS=Bos taurus OX=9913 GN=CLASRP PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-16
Identity = 125/397 (31.49%), Postives = 175/397 (44.08%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           E    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGCGALYNSMSTVNDE--DGLQHVNQEMEAKVSAPFKLSLSVTLN----CEVDH 180
           L+++   G            DE   GLQ  +++ E K  A  K S+  T       EV+ 
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRPSED-EKKKLAEKKASIGYTYEDSTVAEVEK 180

Query: 181 ISMENIHIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASD 240
           ++                        + P  +          E+  +EESNSD +D    
Sbjct: 181 VT------------------------EKPEEE----------ESPAEEESNSD-EDEVIP 240

Query: 241 DEDDEDDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPA 300
           D D E D DE       N E +  + K+     YG       +   ++K + E IK   A
Sbjct: 241 DIDVEVDVDE------LNQEQVADLNKQ--ATTYGMADGDFVRMLRKDKEEAEAIKHAKA 300

Query: 301 IRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSH 360
           + +       + S+ +R   RE  R+ G ++    P    R SPTYD Y RS  S S S 
Sbjct: 301 LEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--SPPSYARRDSPTYDPYKRS-PSESSSE 337

Query: 361 SPSHSRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGD 392
           S S SR  + G          R  KI FIT FGGS +
Sbjct: 361 SRSRSRSPTPG----------REEKITFITSFGGSDE 337

[Close]

BLAST of Lsi10G005450 vs. ExPASy Swiss-Prot
Match: Q8CFC7 (CLK4-associating serine/arginine rich protein OS=Mus musculus OX=10090 GN=Clasrp PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 7.4e-16
Identity = 124/417 (29.74%), Postives = 178/417 (42.69%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           E    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGCGALYNSMSTVNDE--DGLQHVNQEMEAKVSAPFKLSLSVTLN----CEVDH 180
           L+++   G            DE   GLQ  +++ E K  A  K S+  T       EV+ 
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRPSED-EKKKLAEKKASIGYTYEDSTVAEVEK 180

Query: 181 ISMENIHIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASD 240
           +                                          A+  EE  S A++ ++ 
Sbjct: 181 V------------------------------------------AEKPEEEESPAEEESNS 240

Query: 241 DEDDE-DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDP 300
           DED+   D D +   D+ N E +  + K+     YG       +   ++K + E IK   
Sbjct: 241 DEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTYGMADGDFVRMLRKDKEEAEAIKHAK 300

Query: 301 AIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS 360
           A+ +       + S+ +R   RE  R+ G ++    P    R SPTYD Y RS  S S S
Sbjct: 301 ALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--SPPSYARRDSPTYDPYKRS-PSESSS 356

Query: 361 HSPSHSRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQP 411
            S S SR  S G          R  KI FIT FGGS +         +   + P +P
Sbjct: 361 ESRSRSRSPSPG----------REEKITFITSFGGSDEEAAAAAAAAAASGAAPGKP 356

[Close]

BLAST of Lsi10G005450 vs. ExPASy Swiss-Prot
Match: Q5HZB6 (CLK4-associating serine/arginine rich protein OS=Rattus norvegicus OX=10116 GN=Clasrp PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 7.4e-16
Identity = 124/417 (29.74%), Postives = 178/417 (42.69%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           E    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGCGALYNSMSTVNDE--DGLQHVNQEMEAKVSAPFKLSLSVTLN----CEVDH 180
           L+++   G            DE   GLQ  +++ E K  A  K S+  T       EV+ 
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRPSED-EKKKLAEKKASIGYTYEDSTVAEVEK 180

Query: 181 ISMENIHIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASD 240
           +                                          A+  EE  S A++ ++ 
Sbjct: 181 V------------------------------------------AEKPEEEESPAEEESNS 240

Query: 241 DEDDE-DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDP 300
           DED+   D D +   D+ N E +  + K+     YG       +   ++K + E IK   
Sbjct: 241 DEDEVIPDIDVEVDVDELNQEQVADLNKQ--ATTYGMADGDFVRMLRKDKEEAEAIKHAK 300

Query: 301 AIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS 360
           A+ +       + S+ +R   RE  R+ G ++    P    R SPTYD Y RS  S S S
Sbjct: 301 ALEEEKAMYSGRRSRRQRREFRE-KRLRGRKI--SPPSYARRDSPTYDPYKRS-PSESSS 356

Query: 361 HSPSHSRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQP 411
            S S SR  S G          R  KI FIT FGGS +         +   + P +P
Sbjct: 361 ESRSRSRSPSPG----------REEKITFITSFGGSDEEAAAAAAAAAASGAAPGKP 356

[Close]

BLAST of Lsi10G005450 vs. ExPASy Swiss-Prot
Match: Q8N2M8 (CLK4-associating serine/arginine rich protein OS=Homo sapiens OX=9606 GN=CLASRP PE=1 SV=4)

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-15
Identity = 119/393 (30.28%), Postives = 174/393 (44.27%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEAR+ ERK+  MM   +KRA+RR  +  K + DP Q +QV G  C+V+ D  +  A 
Sbjct: 1   MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQVHGRACKVHLDSAVALAA 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           E    ++PW G  + MIDRFD RA LD I +     + T   S E+E  E   N++RYR 
Sbjct: 61  ESPVNMMPWQGDTNNMIDRFDVRAHLDHIPDYTPPLLTT--ISPEQESDERKCNYERYRG 120

Query: 121 LIKHRRRGCGALYNSMSTVNDE--DGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISME 180
           L+++   G            DE   GLQ  +++ E K  A  K S+  T           
Sbjct: 121 LVQNDFAGISEEQCLYQIYIDELYGGLQRPSED-EKKKLAEKKASIGYTY---------- 180

Query: 181 NIHIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD 240
                                        + ++V  + E   +EES ++ + N SD+++ 
Sbjct: 181 --------------------------EDSTVAKVEKAAEKPEEEESAAEEESN-SDEDEV 240

Query: 241 EDDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL 300
             D D +   D+ N E +  + K+     YG       +   ++K + E IK   A+ + 
Sbjct: 241 IPDIDVEVDVDELNQEQVADLNKQ--ATTYGMADGDFVRMLRKDKEEAEAIKHAKALEEE 300

Query: 301 SRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSH 360
                 + S+ +R   RE  R+ G ++    P    R SPTYD Y RS  S S S S S 
Sbjct: 301 KAMYSGRRSRRQRREFRE-KRLRGRKI--SPPSYARRDSPTYDPYKRS-PSESSSESRSR 337

Query: 361 SRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGD 392
           SR  + G          R  KI FIT FGGS +
Sbjct: 361 SRSPTPG----------REEKITFITSFGGSDE 337

[Close]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL
Match: A0A5D3BI48 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00560 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.7e-185
Identity = 363/416 (87.26%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS SPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL
Match: A0A1S3C6Z9 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497395 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.7e-185
Identity = 363/416 (87.26%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS SPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL
Match: A0A0A0LJB3 (DRY_EERY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G277020 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.9e-185
Identity = 361/416 (86.78%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRT EKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAK+SAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKMSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKP+TPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPKTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL
Match: A0A5A7TW82 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003130 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 4.3e-184
Identity = 363/417 (87.05%), Postives = 364/417 (87.29%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMID-RFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYR 120
           EDQQGLIPWNGKQDVMID RFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYR
Sbjct: 61  EDQQGLIPWNGKQDVMIDSRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYR 120

Query: 121 DLIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMEN 180
           DLIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S              
Sbjct: 121 DLIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS-------------- 180

Query: 181 IHIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD 240
                              QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD
Sbjct: 181 ------------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD 240

Query: 241 EDDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL 300
           EDDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL
Sbjct: 241 EDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL 300

Query: 301 SRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSH 360
           SRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS SPSH
Sbjct: 301 SRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRSPSH 360

Query: 361 SRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SRHHS GHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 SRHHSHGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 375

[Close]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL
Match: A0A6J1G6C5 (CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451173 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 2.9e-180
Identity = 352/417 (84.41%), Postives = 362/417 (86.81%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           +DQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  QDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP--ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD 240
                              PQPP  ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD
Sbjct: 181 -----------------QPPQPPAAASKGSYSQVGFSYEADGKEESNSDADDNASDDEDD 240

Query: 241 EDDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL 300
           ED+++E F+SDDSNDEGMEV+AKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL
Sbjct: 241 EDEDEEVFNSDDSNDEGMEVMAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKL 300

Query: 301 SRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSH 360
           SRKERRKASQMEREREREAAR+TGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSH
Sbjct: 301 SRKERRKASQMEREREREAARVTGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSH 360

Query: 361 SRHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SR HSRGH DDVHR+KPRTPKIEFITEFGG G+SKEPRLEGLSPPQSPPSQPDM+NR
Sbjct: 361 SRRHSRGHSDDVHRNKPRTPKIEFITEFGGPGESKEPRLEGLSPPQSPPSQPDMLNR 375

[Close]

BLAST of Lsi10G005450 vs. NCBI nr
Match: XP_038901181.1 (CLK4-associating serine/arginine rich protein isoform X2 [Benincasa hispida])

HSP 1 Score: 661.4 bits (1705), Expect = 5.5e-186
Identity = 364/416 (87.50%), Postives = 366/416 (87.98%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPS+S
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSYS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHSRGHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. NCBI nr
Match: XP_038901180.1 (CLK4-associating serine/arginine rich protein isoform X1 [Benincasa hispida])

HSP 1 Score: 661.4 bits (1705), Expect = 5.5e-186
Identity = 364/416 (87.50%), Postives = 366/416 (87.98%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPS+S
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSYS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHSRGHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. NCBI nr
Match: XP_008457790.1 (PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Cucumis melo])

HSP 1 Score: 658.7 bits (1698), Expect = 3.6e-185
Identity = 363/416 (87.26%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS SPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. NCBI nr
Match: TYJ99490.1 (CLK4-associating serine/arginine rich protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 658.7 bits (1698), Expect = 3.6e-185
Identity = 363/416 (87.26%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAKVSAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKVSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRS SPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSRSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKPRTPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPRTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. NCBI nr
Match: XP_004149706.3 (CLK4-associating serine/arginine rich protein isoform X1 [Cucumis sativus] >KGN62059.2 hypothetical protein Csa_006499 [Cucumis sativus])

HSP 1 Score: 657.5 bits (1695), Expect = 8.0e-185
Identity = 361/416 (86.78%), Postives = 364/416 (87.50%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT
Sbjct: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRT EKSEEEEELEEFVNFQRYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELEEFVNFQRYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           NDEDGLQHVNQEMEAK+SAPF    S               
Sbjct: 121 LIKHRRRG----------FNDEDGLQHVNQEMEAKMSAPFVSDRS--------------- 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPP-ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240
                             QPQPP ASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE
Sbjct: 181 -----------------QQPQPPSASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDE 240

Query: 241 DDEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300
           DDE EDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS
Sbjct: 241 DDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLS 300

Query: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360
           RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS
Sbjct: 301 RKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSRSRSHSPSHS 360

Query: 361 RHHSRGHFDDVHRSKPRTPKIEFITEFGGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           RHHS GHFDDVHRSKP+TPKIEFITEFGGSG+SKEPRLEGLSPPQSPPSQPDMINR
Sbjct: 361 RHHSHGHFDDVHRSKPKTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQPDMINR 374

[Close]

BLAST of Lsi10G005450 vs. TAIR 10
Match: AT4G36980.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). )

HSP 1 Score: 488.0 bits (1255), Expect = 7.8e-138
Identity = 274/419 (65.39%), Postives = 332/419 (79.24%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDF+RE GSR +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           +DE+GLQHV+QE+EAK++APF                   +
Sbjct: 121 LIKHRRRG----------FSDEEGLQHVHQELEAKLAAPF-------------------L 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDED 240
             +  P              QPPA+KG+YSQVGFSY  +GK+ S  DAD++  DD++D++
Sbjct: 181 GTRTQP-------------AQPPANKGTYSQVGFSYAGNGKDNS-LDADEDDVDDDEDDE 240

Query: 241 DEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSR 300
           DE+E+F S+DS+DEGME IAK+FG+KRYGWLVYMDKKAKEEEKRQKE+IKGDP+I+KLSR
Sbjct: 241 DEEEEFDSNDSDDEGMETIAKQFGIKRYGWLVYMDKKAKEEEKRQKELIKGDPSIKKLSR 300

Query: 301 KERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSR--RSRSRSHSPSH 360
           KERRK S++ER+RERE +R  G +++HHDPYRESRRSPTY+AYPRSR  RSRSRS+SPS+
Sbjct: 301 KERRKVSRIERDRERETSRSVGRQIIHHDPYRESRRSPTYEAYPRSRRSRSRSRSYSPSY 360

Query: 361 SRHHSRG-HFDDVHRSKPRTPKIEFITEF-GGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SR + RG H D++ +     PKIE+ITEF GGSGD + P+ EG SPP+SPPSQ D+++R
Sbjct: 361 SRRNGRGDHSDEISK-----PKIEYITEFGGGSGDMRSPKFEGYSPPRSPPSQSDLLSR 371

[Close]

BLAST of Lsi10G005450 vs. TAIR 10
Match: AT4G36980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 5391 Blast hits to 4388 proteins in 280 species: Archae - 1; Bacteria - 114; Metazoa - 3014; Fungi - 666; Plants - 308; Viruses - 14; Other Eukaryotes - 1274 (source: NCBI BLink). )

HSP 1 Score: 488.0 bits (1255), Expect = 7.8e-138
Identity = 274/419 (65.39%), Postives = 332/419 (79.24%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDF+RE GSR +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           +DE+GLQHV+QE+EAK++APF                   +
Sbjct: 121 LIKHRRRG----------FSDEEGLQHVHQELEAKLAAPF-------------------L 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDED 240
             +  P              QPPA+KG+YSQVGFSY  +GK+ S  DAD++  DD++D++
Sbjct: 181 GTRTQP-------------AQPPANKGTYSQVGFSYAGNGKDNS-LDADEDDVDDDEDDE 240

Query: 241 DEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSR 300
           DE+E+F S+DS+DEGME IAK+FG+KRYGWLVYMDKKAKEEEKRQKE+IKGDP+I+KLSR
Sbjct: 241 DEEEEFDSNDSDDEGMETIAKQFGIKRYGWLVYMDKKAKEEEKRQKELIKGDPSIKKLSR 300

Query: 301 KERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSR--RSRSRSHSPSH 360
           KERRK S++ER+RERE +R  G +++HHDPYRESRRSPTY+AYPRSR  RSRSRS+SPS+
Sbjct: 301 KERRKVSRIERDRERETSRSVGRQIIHHDPYRESRRSPTYEAYPRSRRSRSRSRSYSPSY 360

Query: 361 SRHHSRG-HFDDVHRSKPRTPKIEFITEF-GGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SR + RG H D++ +     PKIE+ITEF GGSGD + P+ EG SPP+SPPSQ D+++R
Sbjct: 361 SRRNGRGDHSDEISK-----PKIEYITEFGGGSGDMRSPKFEGYSPPRSPPSQSDLLSR 371

[Close]

BLAST of Lsi10G005450 vs. TAIR 10
Match: AT4G36980.4 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). )

HSP 1 Score: 488.0 bits (1255), Expect = 7.8e-138
Identity = 274/419 (65.39%), Postives = 332/419 (79.24%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDF+RE GSR +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           +DE+GLQHV+QE+EAK++APF                   +
Sbjct: 121 LIKHRRRG----------FSDEEGLQHVHQELEAKLAAPF-------------------L 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDED 240
             +  P              QPPA+KG+YSQVGFSY  +GK+ S  DAD++  DD++D++
Sbjct: 181 GTRTQP-------------AQPPANKGTYSQVGFSYAGNGKDNS-LDADEDDVDDDEDDE 240

Query: 241 DEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSR 300
           DE+E+F S+DS+DEGME IAK+FG+KRYGWLVYMDKKAKEEEKRQKE+IKGDP+I+KLSR
Sbjct: 241 DEEEEFDSNDSDDEGMETIAKQFGIKRYGWLVYMDKKAKEEEKRQKELIKGDPSIKKLSR 300

Query: 301 KERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSR--RSRSRSHSPSH 360
           KERRK S++ER+RERE +R  G +++HHDPYRESRRSPTY+AYPRSR  RSRSRS+SPS+
Sbjct: 301 KERRKVSRIERDRERETSRSVGRQIIHHDPYRESRRSPTYEAYPRSRRSRSRSRSYSPSY 360

Query: 361 SRHHSRG-HFDDVHRSKPRTPKIEFITEF-GGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SR + RG H D++ +     PKIE+ITEF GGSGD + P+ EG SPP+SPPSQ D+++R
Sbjct: 361 SRRNGRGDHSDEISK-----PKIEYITEFGGGSGDMRSPKFEGYSPPRSPPSQSDLLSR 371

[Close]

BLAST of Lsi10G005450 vs. TAIR 10
Match: AT4G36980.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147). )

HSP 1 Score: 483.4 bits (1243), Expect = 1.9e-136
Identity = 274/419 (65.39%), Postives = 331/419 (79.00%), Query Frame = 0


Query: 1   MWHEARRSERKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQVVGTRCRVYRDDGLYQAT 60
           MWHEARRSE+KVHDMMDAARKRAQRRA++LAKRRGDP QSIQ VG+R RV+RDDGLYQAT
Sbjct: 1   MWHEARRSEKKVHDMMDAARKRAQRRAIYLAKRRGDPIQSIQAVGSRYRVFRDDGLYQAT 60

Query: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTQEKSEEEEELEEFVNFQRYRD 120
           EDQQGLIPWNGKQDVMIDRFDGRALLDF+RE GSR +R  +K+EEEEELEEFVNF+RYRD
Sbjct: 61  EDQQGLIPWNGKQDVMIDRFDGRALLDFVREAGSRSVRPHKKTEEEEELEEFVNFERYRD 120

Query: 121 LIKHRRRGCGALYNSMSTVNDEDGLQHVNQEMEAKVSAPFKLSLSVTLNCEVDHISMENI 180
           LIKHRRRG           +DE+GLQHV+QE+EAK++APF                   +
Sbjct: 121 LIKHRRRG----------FSDEEGLQHVHQELEAKLAAPF-------------------L 180

Query: 181 HIQCTPIPYMFFKALPNLQPQPPASKGSYSQVGFSYEADGKEESNSDADDNASDDEDDED 240
             +  P              QPPA+KG+YSQVGFSY  +GK+ S  DAD++  DD++D++
Sbjct: 181 GTRTQP-------------AQPPANKGTYSQVGFSYAGNGKDNS-LDADEDDVDDDEDDE 240

Query: 241 DEDEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIKGDPAIRKLSR 300
           DE+E+F S+DS+DEGME IAK+FG+KRYGWLVYMDKKAKEEEKRQKE+IKGDP+I KLSR
Sbjct: 241 DEEEEFDSNDSDDEGMETIAKQFGIKRYGWLVYMDKKAKEEEKRQKELIKGDPSI-KLSR 300

Query: 301 KERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSR--RSRSRSHSPSH 360
           KERRK S++ER+RERE +R  G +++HHDPYRESRRSPTY+AYPRSR  RSRSRS+SPS+
Sbjct: 301 KERRKVSRIERDRERETSRSVGRQIIHHDPYRESRRSPTYEAYPRSRRSRSRSRSYSPSY 360

Query: 361 SRHHSRG-HFDDVHRSKPRTPKIEFITEF-GGSGDSKEPRLEGLSPPQSPPSQPDMINR 416
           SR + RG H D++ +     PKIE+ITEF GGSGD + P+ EG SPP+SPPSQ D+++R
Sbjct: 361 SRRNGRGDHSDEISK-----PKIEYITEFGGGSGDMRSPKFEGYSPPRSPPSQSDLLSR 370

The following BLAST results are available for this feature:

BLAST of Lsi10G005450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JNI5	5.7e-16	31.49	CLK4-associating serine/arginine rich protein OS=Bos taurus OX=9913 GN=CLASRP PE...	[more]
Q8CFC7	7.4e-16	29.74	CLK4-associating serine/arginine rich protein OS=Mus musculus OX=10090 GN=Clasrp...	[more]
Q5HZB6	7.4e-16	29.74	CLK4-associating serine/arginine rich protein OS=Rattus norvegicus OX=10116 GN=C...	[more]
Q8N2M8	2.8e-15	30.28	CLK4-associating serine/arginine rich protein OS=Homo sapiens OX=9606 GN=CLASRP ...	[more]

BLAST of Lsi10G005450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI48	1.7e-185	87.26	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo var. ma...	[more]
A0A1S3C6Z9	1.7e-185	87.26	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A0A0LJB3	3.9e-185	86.78	DRY_EERY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G277020 PE...	[more]
A0A5A7TW82	4.3e-184	87.05	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucumis melo var. ma...	[more]
A0A6J1G6C5	2.9e-180	84.41	CLK4-associating serine/arginine rich protein isoform X1 OS=Cucurbita moschata O...	[more]

BLAST of Lsi10G005450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901181.1	5.5e-186	87.50	CLK4-associating serine/arginine rich protein isoform X2 [Benincasa hispida]	[more]
XP_038901180.1	5.5e-186	87.50	CLK4-associating serine/arginine rich protein isoform X1 [Benincasa hispida]	[more]
XP_008457790.1	3.6e-185	87.26	PREDICTED: CLK4-associating serine/arginine rich protein isoform X1 [Cucumis mel...	[more]
TYJ99490.1	3.6e-185	87.26	CLK4-associating serine/arginine rich protein isoform X1 [Cucumis melo var. maku...	[more]
XP_004149706.3	8.0e-185	86.78	CLK4-associating serine/arginine rich protein isoform X1 [Cucumis sativus] >KGN6...	[more]

BLAST of Lsi10G005450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36980.1	7.8e-138	65.39	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.2	7.8e-138	65.39	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.4	7.8e-138	65.39	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G36980.3	1.9e-136	65.39	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 295..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..379
None	No IPR available	PANTHER	PTHR13161:SF4	CLK4-ASSOCIATING SERINE/ARGININE RICH PROTEIN	coord: 1..411
IPR019147	Suppressor of white apricot, N-terminal domain	SMART	SM01141	DRY_EERY_2	coord: 39..220 e-value: 1.7E-50 score: 183.7
IPR019147	Suppressor of white apricot, N-terminal domain	PFAM	PF09750	DRY_EERY	coord: 41..218 e-value: 3.1E-32 score: 111.7
IPR040397	Suppressor of white apricot	PANTHER	PTHR13161	SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT	coord: 1..411

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005450.1	Lsi10G005450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane