Lsi10G004570 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCAGAAAGGTAAAAATATAAAAGTTTATATAAAATGAATGGATTTACCTTTTTTTTTCAGGTCTTGATTTGAATTGATTTTGTTCAGAAAGTGGCAGCAAACCGAGTTTAGGGCAGATAGTTTGGGCTTCTTCGATTGGATTGATCATCGTTGCTGCTATGCATTATCGGATTCGAAAGCTAAGAGATCAAAAGATCATCCCTCGCTTGAAAGTTTCCGACACGGGTCGCGTTGAAAAGCTCGAGAGCTTTCCCCATTATGTAGGTAAAGATTATATACTTACGTTCTTTTCATAATTTACATTACTGAAATTGTTCCATTTCTTTAAGGAAATTTTTACACATGAAAAAAATGTCAAAATAGTAATATATATATATATATATTTTGATAGACATTGATAGACTTTTATCCGCATCTATCAGTGATAAACTAGACTTCTATCCGCATCTATCACTCATCTATCGCTGATAGACTTCTATCAGCATCTATAAGTGATAGACTAGATTTCTATCAGCATCTATCGCTCATCTATCACTTAGTGATAGACTTCTATCAGCATCTATCACTCAATAATAGATTTCTACATTTCTATCAGTGGTAGGCTCGATAGAAACGTCTATCACGATTCACAACTATCTAAAAAATTTTGTTATTTTGTGCAAATAGTTTCTTTATTTTTCTATTTTTAAAAAAATTCTCCATTTATTTAGCTTAGTTTTTCCTTTTTCTTTAGAATTTGTTTTTAAGAACCTCAAGCCTAAGTTTGTGAACTATGTTGGTAAATTATAGATAACTTAAATTACACATTTTGTCAGAAAATTAGAATTTAGTCCTAGAATTAGTCTCTATAAAGGTCTATTTATGAAATTTATCAAATTATAAATACCATTTATAAAGTTTTATCAAATCATAGGAACTAAATTTTAACTTTTAAAATAGTAAATTCTAACTTTCTCTCTACTATAAGAACCAAATTTGTAATTTGACCTTATAGATATTATTCTAATCTTATCCTCAATTTTTTAGTCAATCTGACCATGGCCCAACTAGTTAATTGGGGAGGAAATGGAATTCACAACTCTACTCTCAGTCCAAAACATCAATTTTATGTTTTATTAACTCTTTACATTGTGGATCCCACAACTTCACAACTCTTTTGACTTTATAACCCTCCAAACTTCACAACTCCATTCATTGTCCCAAACATCCCAAAGAGTATAGATAATTAGCCACTAACCATGAATTTGCATTTCTTTTTAGAAAATTATTTTTTAAGATGGGTAGGGGATGCTTGTTAAAAGTGTTTTTTGAGTGAAACTATTATTCTATAAGTACTTTTGACTAAAAACTAATTAAGTTTTTTTTTCTTTTTTAAAGTCGAAATGAGCTTAGTTCACTATCATAAAAGTATGTGTTAAGGACCAAGAGATTTATGATTCAAATCGTCCACCCTATTATACTAAAAATATATATATTTCCTCTTTTAAAAGTTAAAACAGTTTACCACTTTTGATTTCACAAATTAAAAAAAAATACATTTAACTAGCTTAAAACACTAATTAAAATTTTAACCAAACACAGCTCACTTTTATAAAATAATAATAATAATAAACCAACTTTTAAAAATCCATGAACAATTTGAAAGACATGTAAAAAAATTTAAGCCATTAAAAATGAAATTGTTATCAAGCAAGACTATCAGTTAGAGGATCGAGAAAATGATATCCACTTTTTTTTTGTTCAAATAAGACTGAAATAGAAATTAGAACAAAATTTTGAATCCAAAATAGTTGTTGCATTGACGTTCAGTCTCTAAACTTTTAAGTCTATGTTCATTTTATCTTTAAAATTTAAAAAGTGTTAATAGGCCTACGTCCAAAAGGTCCCTAAATTATCAAAAGTGTCTAATAACAAATCTTTATACTTTCAATTTTATGTCTATTAGGTGCATAAATTTTAAAAAATATTGGATAGGTTAATGACCTATTAAACACAAACTTTTTCCAATTTGACATTTTTTAAAATTCACGTGGATAATGTACACAAAACTAAAAGTTTATCCTCTTATTAGATATAAAATTCAATTTTTAATTTCACAAATCTATTATTATTTAAAAAATTTCAAACATGTCTAAGACTTGTAGACACAAATCGTAAAGTTGAGAGACCCATATAGGAATTCTTTAAAGTTGACCTACTAACCAACAAACTAAAACTCGGATGACCTAAAGTTTAAAGACTTTCTTTAAAAGTTCATATTCTAAACTTGTAACTTAACCCTAGTTGTTTTATTAAAAAAATTAAAACATAATATTAGAAATTTAATTCCAATTCCACAAATTATCATCTTGGTTGAATACCCATGTCTCATTCTCATTTCTTTTACATAAGCACCATCTAAAATTTCCAAACTCAATACCAATTTTGATACTTCTCTCTCTCAATATTTAACCTTTTATGTTAGATGATATAATATTAAATTTACCTTGACTCGTCAACTCAAACTTTTGGGTCAATTGGTAATTTAACATGGTGTCAACATAGGTGGTCCAAGAGATCCTGTATTTAAACTTAGTACTACGGTGGAATATTTTCCCTACTACCTTCATTTATTGTTTGCTACAAAAGTAGAATTTAAGAATTATATGGGGTCCACGAAATAAATGAATAATAAATTAATAACTCATTTGATGACGTTTCAAATAATGAATGGGAGTAGTAAGTACTATACTACTATAAATTTTTCCATTTCCTCCCCAATTAATATTGATGTTCACTCTCGAGTTCTCTACATATTTTAAGTCCACAAGTGAAAGGAAGTAAGATGATATAATATTAAATTTACCTTCATCTATCAACATAAGCTTTCAAGTCAATCGGTGACTTTAACATTCTATCGATAACTTGTCTACTTTTATTCTCAATTATCAGCAAGGCAAATGGGATTTAAAGATATACATGAATGCCCACATCTTTGCAAGTTGGCTTCTGAGTACATAGCTAAATCAGACGAATGTGAAGATGATATCTATTCCTTTTTCTCAAGTGAGCTGCATGCAGATTCACTTTTTGTCAAACTTGTGGAAGAGTTTGAGAGATGCATTCTCAGTTATTTTGCATTCCATTGGAATCAAACAGATATTATGATTAGTCAGGTGAAGTGTTTGATAAAATGTTTTTTAATTTTATCATAAATTGAGTTTCTTGTTTGTATAATTTGTGTATTGTTTGTATCTCTTTTTGTGTTTGTTCAGATTTTGAGTTCCGACCACCAGGAGCCAAAAAAGAAGCTCAGAAGCATTGTAATGGCTGCAACCAGGTGGGCATCTCTTGACCCTTCATTATTGTTGAAGTATCTAATATAATTAAATTTACCGTTACCCATCAACTTAGGCTTTGGGGTTGATTGGTGATTTAACACGGTATTAGAGCAGAAAATTTTGTATTCAAATCTTTGTAGTGTCATTGCTTTCTCAAATAATATTGATTTCCAATTTCGGGGGCTTCCATAAATTTTCAAGTCCCAAAAGTGAGGGGGGTGTTGAAATATTGATATAACTAAATTTACCCTAACTTACTAACTTAAACTTTTGGGTTGATTGGTGATTTAGTATGGTGTCAAAGCAAGAGATCCTATGTATGGACCTCATAAGATGTAATTTCCTATCCTATTAATATTCATTTTCCACTTGTTGAACTTTCTATAAATTTTCAAGTCCCACAAGTGAGAAAAAGTGTTGAAACATTGATATAATTGAATTTACCGTGTCCTATTATTTTTAAGCTTGTAGGTTGATTGGTGATTTAATTCTAAAAGTCAGAGACTAAATTTATAATTTAACTTTATATGAACTTATGGCCCCTCTACATGAATTTATGGATCTGGCACCGACTAGGATGTCACATTTTTTACATTAAATTCTTTATTAAAGAGATTATTGAGAAGAAAGCTATCGTATCAAGTCAAGTTTTTAAAAGTTGTGCTTTTGTTTTTTAAATTTGGCTAAGAACTCAAAGTTTTTAAGAAAGATGAAAATTGTTATCAAGAAATTATGAGAAAACAAGCACAATTTTTAAAGACGGAGTGATTATCAAACATACCTTAATCTTTTAAACTCATCTAAGAACAACCTTCACTTACATCCATATCATTTTTTGTGATATTGTTAGGGAACAGAGGTTTGAGAGGGTAACAAAGAACCTGAAAGTTGCAAGAGTATTTACAACTTTGGTTGAGGAGATGAAAGCAATGGGACTCGCATCCACCGACGACTCTCAATGCACAGAGGTGATGGCTCCAATGGCTCATGCCGATAGAAGTCCGATGCTCCTGTTCATGGGCGGCGGTATGGGGGCGGGGAAGAGTACTGTGCTTAAGGACATTCTGAAAGAGTAAGAATATTCATCTTGGGTTATGAAAATGAAGTCAAATTTCATCAGATATAGCTAAGTAAATTTGTACAATTATTAAGCATATATAATGGCATATATAATGTTAAACAGGCCATTCTGGGTAGGAGCAGGACCTAATGCAGTTGTAATTGAGGCAGATGCTTTTAAAGAATCAGATGTCATTTATAGAGCTCTTAACTCCACTGGTCACCATCATGACATGCTTCAAACTGCTGAACTGGTATCATTTCAGCTCTAAAATCTTCCATCAAAATCATTCCATGCTTTGAGATTATATATAAAATTTTCTCATTCTGCTCTTTGTGGCTTTCAGTTCATAAGATCATGGTTTTTACTTCTTTTATGACTTCGTGAAAACTAATTATCAGTAGGACCTGTTTGGAATGACTTTTCAAGTACTTAAAAACACTTCTTTTTTTTTTTGCTTAAAAACATTGTTAAGTAATTGAAAAGTCATTTCAAATCAGTTTATAGTCTCCAATACGTAACCAACATGCAGAATCATACACCCACCTAGTGCAGAGGCTGAGCATTTGCCTTACCACACCATGGTGTGTGGAGTTCGATCTTGCAACTATGCAGTTCGTTGTTTGTTTACGCAATAAGGTCATGGGTTTATTAAAGGACTTAGAGGGAATAGGTTTAATCCATAGTGGCCACATACCTAAGATTTAATATTCTATGAGTGTCCCAGACACCCAAATTTTGAGGGTCAAGTAGGTTGTCTCGTGAGATTAGTCGAGGTGTATGAAAGCTAACCCGAACACTCACGCATATAAAAAGAAAAAAGAAAACATACAGATGCTCCTTTTTCATTATTTTCCTAATGAAGGCAAAAGGCATTCTTATGAACCTCTTGTTTCTTTAGGCCGTGGGATTAAATCTTGAAATCTGTTATGAACCAGATATTCTTACACTTCACTTTTGATCCTTGCTGCACCATTTTACACCTTTTGATGTTTCAATTTAAAATATATGTTTCAAACAGGTGCACCAATCATCCACAGATGCAGCTTCATCACTTCTAGTGACAGCACTGAATGAAGGACGAGACGTAATCATGGATGGCACATTGTCGTGGGTACCGTTCGTAGTTCAGACGATTACGATGGCTAGGAATGTCCACCGTCGACGTTATCGAATGGGAGCTGGCTATAAGGTTGGTGATGATGGCACTGTAACCGAAAATTATTGGGAACGAATAGAAGATCAAGAACCAGATCAAGTTGGGGGCAAGAAAAGAAAGCCATACAGGATTGAACTTGTTGGAGTTGTTTGTGATGCTTATTTAGCTGTCATAAGAGGCATAAGGTACAGATAG ATGATGCAGAAAGAAAGTGGCAGCAAACCGAGTTTAGGGCAGATAGTTTGGGCTTCTTCGATTGGATTGATCATCGTTGCTGCTATGCATTATCGGATTCGAAAGCTAAGAGATCAAAAGATCATCCCTCGCTTGAAAGTTTCCGACACGGGTCGCGTTGAAAAGCTCGAGAGCTTTCCCCATTATAGGTTTGAGAGGGTAACAAAGAACCTGAAAGTTGCAAGAGTATTTACAACTTTGGTTGAGGAGATGAAAGCAATGGGACTCGCATCCACCGACGACTCTCAATGCACAGAGGTGATGGCTCCAATGGCTCATGCCGATAGAAGTCCGATGCTCCTGTTCATGGGCGGCGGTATGGGGGCGGGGAAGAGTACTGTGCTTAAGGACATTCTGAAAGAGCCATTCTGGGTAGGAGCAGGACCTAATGCAGTTGTAATTGAGGCAGATGCTTTTAAAGAATCAGATGTCATTTATAGAGCTCTTAACTCCACTGGTCACCATCATGACATGCTTCAAACTGCTGAACTGGTGCACCAATCATCCACAGATGCAGCTTCATCACTTCTAGTGACAGCACTGAATGAAGGACGAGACGTAATCATGGATGGCACATTGTCGTGGGTACCGTTCGTAGTTCAGACGATTACGATGGCTAGGAATGTCCACCGTCGACGTTATCGAATGGGAGCTGGCTATAAGGTTGGTGATGATGGCACTGTAACCGAAAATTATTGGGAACGAATAGAAGATCAAGAACCAGATCAAGTTGGGGGCAAGAAAAGAAAGCCATACAGGATTGAACTTGTTGGAGTTGTTTGTGATGCTTATTTAGCTGTCATAAGAGGCATAAGGTACAGATAG ATGATGCAGAAAGAAAGTGGCAGCAAACCGAGTTTAGGGCAGATAGTTTGGGCTTCTTCGATTGGATTGATCATCGTTGCTGCTATGCATTATCGGATTCGAAAGCTAAGAGATCAAAAGATCATCCCTCGCTTGAAAGTTTCCGACACGGGTCGCGTTGAAAAGCTCGAGAGCTTTCCCCATTATAGGTTTGAGAGGGTAACAAAGAACCTGAAAGTTGCAAGAGTATTTACAACTTTGGTTGAGGAGATGAAAGCAATGGGACTCGCATCCACCGACGACTCTCAATGCACAGAGGTGATGGCTCCAATGGCTCATGCCGATAGAAGTCCGATGCTCCTGTTCATGGGCGGCGGTATGGGGGCGGGGAAGAGTACTGTGCTTAAGGACATTCTGAAAGAGCCATTCTGGGTAGGAGCAGGACCTAATGCAGTTGTAATTGAGGCAGATGCTTTTAAAGAATCAGATGTCATTTATAGAGCTCTTAACTCCACTGGTCACCATCATGACATGCTTCAAACTGCTGAACTGGTGCACCAATCATCCACAGATGCAGCTTCATCACTTCTAGTGACAGCACTGAATGAAGGACGAGACGTAATCATGGATGGCACATTGTCGTGGGTACCGTTCGTAGTTCAGACGATTACGATGGCTAGGAATGTCCACCGTCGACGTTATCGAATGGGAGCTGGCTATAAGGTTGGTGATGATGGCACTGTAACCGAAAATTATTGGGAACGAATAGAAGATCAAGAACCAGATCAAGTTGGGGGCAAGAAAAGAAAGCCATACAGGATTGAACTTGTTGGAGTTGTTTGTGATGCTTATTTAGCTGTCATAAGAGGCATAAGGTACAGATAG MMQKESGSKPSLGQIVWASSIGLIIVAAMHYRIRKLRDQKIIPRLKVSDTGRVEKLESFPHYRFERVTKNLKVARVFTTLVEEMKAMGLASTDDSQCTEVMAPMAHADRSPMLLFMGGGMGAGKSTVLKDILKEPFWVGAGPNAVVIEADAFKESDVIYRALNSTGHHHDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYKVGDDGTVTENYWERIEDQEPDQVGGKKRKPYRIELVGVVCDAYLAVIRGIRYR Homology
BLAST of Lsi10G004570 vs. ExPASy Swiss-Prot
Match: Q0WUY1 (Calmodulin calcium-dependent NAD kinase OS=Arabidopsis thaliana OX=3702 GN=NADKC PE=1 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 9.8e-86 Identity = 174/269 (64.68%), Postives = 200/269 (74.35%), Query Frame = 0
BLAST of Lsi10G004570 vs. ExPASy TrEMBL
Match: A0A1S3C6U1 (uncharacterized protein LOC103497509 OS=Cucumis melo OX=3656 GN=LOC103497509 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.6e-142 Identity = 279/381 (73.23%), Postives = 281/381 (73.75%), Query Frame = 0
BLAST of Lsi10G004570 vs. ExPASy TrEMBL
Match: A0A0A0LJB0 (Zeta_toxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G258840 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140 Identity = 277/381 (72.70%), Postives = 279/381 (73.23%), Query Frame = 0
BLAST of Lsi10G004570 vs. ExPASy TrEMBL
Match: A0A6J1G6X9 (uncharacterized protein LOC111451387 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451387 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 5.1e-138 Identity = 271/384 (70.57%), Postives = 277/384 (72.14%), Query Frame = 0
BLAST of Lsi10G004570 vs. ExPASy TrEMBL
Match: A0A6J1KZI6 (uncharacterized protein LOC111499679 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499679 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 6.7e-138 Identity = 270/384 (70.31%), Postives = 277/384 (72.14%), Query Frame = 0
BLAST of Lsi10G004570 vs. ExPASy TrEMBL
Match: A0A6J1KXL4 (uncharacterized protein LOC111499679 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499679 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 6.7e-138 Identity = 270/384 (70.31%), Postives = 277/384 (72.14%), Query Frame = 0
BLAST of Lsi10G004570 vs. NCBI nr
Match: XP_038901153.1 (uncharacterized protein LOC120088136 isoform X1 [Benincasa hispida]) HSP 1 Score: 519.2 bits (1336), Expect = 2.2e-143 Identity = 281/385 (72.99%), Postives = 285/385 (74.03%), Query Frame = 0
BLAST of Lsi10G004570 vs. NCBI nr
Match: XP_008457945.1 (PREDICTED: uncharacterized protein LOC103497509 [Cucumis melo]) HSP 1 Score: 514.6 bits (1324), Expect = 5.4e-142 Identity = 279/381 (73.23%), Postives = 281/381 (73.75%), Query Frame = 0
BLAST of Lsi10G004570 vs. NCBI nr
Match: XP_011650155.2 (uncharacterized protein LOC101203899 [Cucumis sativus]) HSP 1 Score: 508.8 bits (1309), Expect = 3.0e-140 Identity = 277/381 (72.70%), Postives = 279/381 (73.23%), Query Frame = 0
BLAST of Lsi10G004570 vs. NCBI nr
Match: XP_022947558.1 (uncharacterized protein LOC111451387 isoform X2 [Cucurbita moschata]) HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137 Identity = 271/384 (70.57%), Postives = 277/384 (72.14%), Query Frame = 0
BLAST of Lsi10G004570 vs. NCBI nr
Match: XP_023533279.1 (uncharacterized protein LOC111795219 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137 Identity = 271/384 (70.57%), Postives = 277/384 (72.14%), Query Frame = 0
BLAST of Lsi10G004570 vs. TAIR 10
Match: AT1G06750.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 384.0 bits (985), Expect = 1.0e-106 Identity = 225/386 (58.29%), Postives = 249/386 (64.51%), Query Frame = 0
BLAST of Lsi10G004570 vs. TAIR 10
Match: AT1G06750.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 382.1 bits (980), Expect = 3.9e-106 Identity = 224/381 (58.79%), Postives = 246/381 (64.57%), Query Frame = 0
BLAST of Lsi10G004570 vs. TAIR 10
Match: AT2G30630.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 370.9 bits (951), Expect = 9.1e-103 Identity = 215/375 (57.33%), Postives = 240/375 (64.00%), Query Frame = 0
BLAST of Lsi10G004570 vs. TAIR 10
Match: AT2G30630.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 366.7 bits (940), Expect = 1.7e-101 Identity = 188/223 (84.30%), Postives = 204/223 (91.48%), Query Frame = 0
HSP 2 Score: 51.6 bits (122), Expect = 1.2e-06 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Lsi10G004570 vs. TAIR 10
Match: AT1G04280.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 318.2 bits (814), Expect = 7.0e-87 Identity = 174/269 (64.68%), Postives = 200/269 (74.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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