Lsi10G004380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G004380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	auxin-responsive protein SAUR21-like
Location	chr10: 6579118 .. 6579414 (+)
RNA-Seq Expression	Lsi10G004380
Synteny	Lsi10G004380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

mRNA sequence

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

Coding sequence (CDS)

ATGGGAATTTGTTTGCCTTCGGTCCTCCTTGGCGTCGCCAAGCAAATTCTCAAGAAGCAGTCTGTTTCTTCAAGATGTCAATCCAATGTTCCTAAAGGCCACATTCCGGTGTACGTAGGAAAAACCGAAAGAAAGCGGTTTTTTGTTCCGATATCTTACTTGAGTCATCCTTCATTTGTAGACTTGCTCAAGAGGGCTGAAGAAGAGTTTGGATTCAGCCACCCAATTGGAGGTTTGACAATTCCCTGCAAAGAAGAAGCCTTCATTGATATTACTTCTAGACTGCATACTTCATGA

Protein sequence

MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS

Homology

[Close]

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-23
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 12 VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFG 71
          VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFG
Sbjct: 9  VAKKILSR---SAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFG 68

Query: 72 FSHPIGGLTIPCKEEAFIDITSRLH 97
          F HP+GGLTIPC E+ FI++TSRLH
Sbjct: 69 FDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EE
Sbjct: 7  LLG-AKKILSR---STAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF+HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFAHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL + + S+      PKG + VYVG++++KR+ VP+SYLS PSF  LL ++EE
Sbjct: 7  LLG-AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.8e-22
Identity = 50/87 (57.47%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EE
Sbjct: 7  LLG-AKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSRL 96
          EFGF HP+GGLTIPC E+ FI++TSRL
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.6e-22
Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 9  LLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEE 68
          LLG AK+IL +   S+   S  PKG + VYVG++++KR+ VPISYL+ PSF  LL ++EE
Sbjct: 7  LLG-AKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEE 66

Query: 69 EFGFSHPIGGLTIPCKEEAFIDITSR 95
          EFGF HP+GGLTIPC E+ FI++TSR
Sbjct: 67 EFGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL
Match: A0A6J1FYM0 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448825 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.8e-41
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI L S+LLG AKQILK QSVS  CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFV
Sbjct: 1  MGIRLLSILLGAAKQILKMQSVSVVCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFS P GGLTIPCKEEAFID+TSRLHTS
Sbjct: 61 DLLDRAEEEFGFSQPTGGLTIPCKEEAFIDVTSRLHTS 98

[Close]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL
Match: A0A6J1J8D4 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484392 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.6e-41
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFV
Sbjct: 1  MGIRLLSVLLGAAKQILKMQSVSAVCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFS P GGL IPCKEEAFID+TSRLHTS
Sbjct: 61 DLLNRAEEEFGFSQPTGGLMIPCKEEAFIDVTSRLHTS 98

[Close]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL
Match: A0A0A0LLF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258750 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-38
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI  PSVLL  AKQILK +SVS RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV
Sbjct: 1  MGIRFPSVLLS-AKQILKMKSVSIRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL
Match: A0A0A0LM65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258730 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.0e-38
Identity = 80/98 (81.63%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL
Match: A0A5A7TWB4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001820 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37
Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRF VPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
           LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 HLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: XP_038901506.1 (auxin-responsive protein SAUR21-like [Benincasa hispida])

HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41
Identity = 84/98 (85.71%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI  PSVLLG AKQILK QSVS++CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSF+
Sbjct: 1  MGIRFPSVLLGAAKQILKMQSVSAKCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFI 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFSHP G LTIPCKEEAFID+TS LH S
Sbjct: 61 DLLNRAEEEFGFSHPTGRLTIPCKEEAFIDVTSGLHAS 98

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: XP_022944360.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6571062.1 Auxin-responsive protein SAUR19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI L S+LLG AKQILK QSVS  CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFV
Sbjct: 1  MGIRLLSILLGAAKQILKMQSVSVVCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFS P GGLTIPCKEEAFID+TSRLHTS
Sbjct: 61 DLLDRAEEEFGFSQPTGGLTIPCKEEAFIDVTSRLHTS 98

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: XP_022986727.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHPSFV
Sbjct: 1  MGIRLLSVLLGAAKQILKMQSVSAVCQSNVPKGHIPVYVGETERKRFFVPISYLSHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFS P GGL IPCKEEAFID+TSRLHTS
Sbjct: 61 DLLNRAEEEFGFSQPTGGLMIPCKEEAFIDVTSRLHTS 98

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: XP_023512608.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI L SVLLG AKQILK QSVS+ CQSNVPKGHIPVYVG+TERKRFFVPISYLSHP FV
Sbjct: 1  MGIRLLSVLLGAAKQILKMQSVSAVCQSNVPKGHIPVYVGETERKRFFVPISYLSHPLFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          DLL RAEEEFGFS PIGGLTIPCKEEAFI +TSRLHTS
Sbjct: 61 DLLDRAEEEFGFSQPIGGLTIPCKEEAFIYVTSRLHTS 98

[Close]

BLAST of Lsi10G004380 vs. NCBI nr
Match: KGN61931.2 (hypothetical protein Csa_006339 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.5e-38
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFV 60
          MGI LPSVLL  AKQILK ++VS+RCQS+VPKGHIPVYVG+ +RKRFFVPISYL+HPSFV
Sbjct: 1  MGIRLPSVLLS-AKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFV 60

Query: 61 DLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          +LL RAEEEFGFSHP GGLTIPCKEEAFID+TSRLH S
Sbjct: 61 NLLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLHIS 97

[Close]

BLAST of Lsi10G004380 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 6.8e-26
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 1  MGICLPSVLLGVAKQILKK----QSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSH 60
          M I +P VL   +KQIL++     S SS    +VPKG++ VYVG+   KRF VP+SYL  
Sbjct: 1  MAIRIPRVLQS-SKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQ 60

Query: 61 PSFVDLLKRAEEEFGFSHPIGGLTIPCKEEAFIDITSRLH 97
          PSF DLL++AEEEFGF HP+GGLTIPC EE FID+ SR +
Sbjct: 61 PSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Lsi10G004380 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.8e-25
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 7  SVLLGVAKQILKKQSVSSRCQSNVPKGHIPVYVGK-TERKRFFVPISYLSHPSFVDLLKR 66
          S +L  +KQ+LK  S SS     +PKGH+ VYVG+  +++RF VP++YLSHP F  LL++
Sbjct: 6  SRVLQSSKQLLKSLSHSSN-NVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRK 65

Query: 67 AEEEFGFSHPIGGLTIPCKEEAFIDITSRLHTS 99
          AEEEFGF HP+GGLTIPC E+ FID+ SRL TS
Sbjct: 66 AEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004380 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 14  KQILKKQSV------SSRCQSNVPKGHIPVYVG---KTERKRFFVPISYLSHPSFVDLLK 73
           KQILK  S+      SS    +VPKGH+ VYVG   + E+KRF VPIS+L+HPSF + L 
Sbjct: 13  KQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLS 72

Query: 74  RAEEEFGFSHPIGGLTIPCKEEAFID-ITSRL 96
           RAEEEFGF+HP+GGLTIPC+EE F+D I SRL
Sbjct: 73  RAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of Lsi10G004380 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 3.7e-24
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 12 VAKQILKKQSVSSRCQSNVPKGHIPVYVGKTERKRFFVPISYLSHPSFVDLLKRAEEEFG 71
          VAK+IL +   S+   S  PKG + VYVG++++KR+ VP+SYL+ PSF  LL ++EEEFG
Sbjct: 9  VAKKILSR---SAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFG 68

Query: 72 FSHPIGGLTIPCKEEAFIDITSRLH 97
          F HP+GGLTIPC E+ FI++TSRLH
Sbjct: 69 FDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Lsi10G004380 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 23 SSRCQSNVPKGHIPVYVGK--TERKRFFVPISYLSHPSFVDLLKRAEEEFGFSHPIGGLT 82
          S + QS VPKGH+ VYVG+    +KRF VPISYL+HPSF  LL RAEEEFGF+HPIGGLT
Sbjct: 14 SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAEEEFGFNHPIGGLT 73

Query: 83 IPCKEEAFIDI 92
          IPC+EE F+ +
Sbjct: 74 IPCREETFVGL 84

The following BLAST results are available for this feature:

BLAST of Lsi10G004380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJF6	5.3e-23	57.65	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG1	2.0e-22	58.62	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	3.4e-22	57.47	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FK62	5.8e-22	57.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	7.6e-22	58.14	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]

BLAST of Lsi10G004380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYM0	5.8e-41	87.76	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1J8D4	7.6e-41	87.76	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484392...	[more]
A0A0A0LLF7	3.5e-38	82.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258750 PE=3 SV=1	[more]
A0A0A0LM65	6.0e-38	81.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258730 PE=3 SV=1	[more]
A0A5A7TWB4	1.0e-37	81.63	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Lsi10G004380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901506.1	5.4e-41	85.71	auxin-responsive protein SAUR21-like [Benincasa hispida]	[more]
XP_022944360.1	1.2e-40	87.76	auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6571062.1 Auxin-re...	[more]
XP_022986727.1	1.6e-40	87.76	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]
XP_023512608.1	6.0e-40	87.76	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
KGN61931.2	2.5e-38	82.65	hypothetical protein Csa_006339 [Cucumis sativus]	[more]

BLAST of Lsi10G004380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	6.8e-26	57.00	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	5.8e-25	58.06	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.3e-24	60.87	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	3.7e-24	57.65	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	1.4e-23	67.61	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..94 e-value: 7.6E-26 score: 90.1
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 10..97
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 10..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004380.1	Lsi10G004380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009733	response to auxin
molecular_function	GO:0004842	ubiquitin-protein transferase activity