Lsi10G004220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G004220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ubiquitin fusion degradation protein 1 homolog
Location	chr10: 6379533 .. 6387051 (-)
RNA-Seq Expression	Lsi10G004220
Synteny	Lsi10G004220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAATCTCAGCCATTTTGAAGGATATCGGCTGGGTTTCTCTCTTCTCCAATTCTCTCGTCTGAGCTTCCATAAGTCGGTCAGAGCTTCTCTCTCATTTCCGCCATTAAAGGTTTCTCCAATTTCCCTTTCCCGATCATTTCCTTTCTCACTGTTTATACTCTTACATTACTTTTCGATCCAACCAATTTCTTCTAATTTTTTACAATTTGCATTTCTGTTCCTAATCAGATTTTTGTTTTCTGCAACTATTCTCAACAATTACCTTTGTTTCTTTCGTATATTGATTCTTTCTTTTGCTTGTGCTTGTGGGTAATCGCTTATTTTTCAAGTAAGATAAAGTAGTAAAGGTTGAGCTTGTGCCTTGTATCGTAGTGAAGGCTGTCGTTTCTTTTGGATTGCAAAAGGAATAATTCAGATGAGAACTGTTACAAATCCACATTTCCCCTCCAAATCTATGGTTGAAGGTTTTGGACCTTTCTCCTGTTTGTTATGAAGTTGAACTTCTTTGTATATAACTTGTAATAATCCACATCTGAGTTGAACCAGATGTTTGATCTCCGTGTTTGTGTGTGTGTGTGTGTGTGCTGAGGACTGTGCTTGTTCTGATTAAACTATGAGCTTCAGAACCTTTTCTTTTGCACATGGGTTTTTTTTTAATGATTTACATGTTTGTCTGTTTACTTGGTATTCGTTAAATGGAGAGTCTCTTATCTAATTGGTTTCGTCTTCTACCTTGAGCTGCATTTTTTAAAACTAATATTCCGTACTTCCATTGGTAGGTTCAGGTTTTGGGGTGATACTCTGCAAGAATCTACACTATGGTAAGTTATTTAACTCATATTTTAGCCAACCCCCACTCCCCCATTAGAAAAAATGGTAACATGTGACATTGGTTTGAGCTTAAAGAAGGGCTGGATTTCTGTAACCTCTTTCCCTTTGTTCTTGTTAATTTTATATGGTTTATATGGATATCTATGGGCTGGTTAGGTATGTTTTCAAATTTCTTTTACAAACTAATTTTTTAAGCTGTTCAGGATGATTAATGAATGTATGAAAAGGTTAAGATGCAATTTCTCTACACTTCCATCTGTTTTGAAATTGTTCTTAAAAAGTAGTTTGCCGAACAAATGTTTTGCTTTGAAGAAACTTTTTTTTTTAAAGCAGAAAATTGAATTCTAACAGTCTCCTTAAAATTTGAATGCCTAAACCGAATCCGCATTATTTGATTGGAAGATTTCTTTAACAGCTTTTCCAATATTGTGAATGTTCTCATTAAAAAAACAAATAATAATTGTGAGTTTAATTCAAAGACTCCTGAATATAGAACTTTTCATATGGAACTGAAATAGGCACAATCTTTTAAATTGTGGCTGTGGGCACATTCATCTATGGTCCACTCTTGGAATATTACTTTAATGTTATTTAATAGAATATTTCCCTGTTGACATATAGGTTCTTTTAAAGTTTAAAGCTTACAATAGCATCATAATGTAATCTCAAATGTTTCATGTGGTTGTGCAGTTCTTCGACGGGTATGGATATCATGGGACTTCATTTGAGCAAACATATCGGTGTTATCCTGCATCTTTTATTGAAAAGGTTGCTGAACATTATTTTTTAACTCAATTATTTACTTGTCTAGGCTACTATAATTTTCTTTCAAAAGATTAGCAAAAGCTGTTTTAATTCCATCATCATTCTTCAGTCTTTAAATAGTGAAGGTAAGCAGATCATTCTATTTTCTCACTGTCATCCTCATCTTATTCTGCACATCCACAAGATTTCTTCAATGAAATAGTAAAGTGAAGGATGTTGGTCTCATTGAGTCATGAAGGTGTTTTCGTGTAGTTTGATTAGCTACTTTTTGGGTTGTGTAGCTTGATGAATTTGGACATAGAGATAAAATTTGATTTTGTATTTTACTCAACATATGTTTTTAGTCTAATCTCTGTTTATTTCATCTTTTTTGCAGCCACAACTTGAAACTGGTGACAAAAGTAAGTTTTTATGATTTATGTTACTTTCTATTGTCAAATATCCCATTCTTGCTAATGTATCTTTGTATGTTTACCTCTTCATTTCAGTCATAATGCCACCATCAGCCCTTGATCGCCTTGGTATTTTCTGCTTTTGCTATGACTTAGTTCCTTTTACCTTTTTATTTTTATTTTTACATTTATATATTTATTGTTCTTCATGTGTTGTGCAATGGTAATTCAAAATTAAACTAATACCTGCAGCATCTTTACATATCGATTATCCAATGTTGTTTGAGCTTCGGAATGATGTTACTGAACGACTTTCCCACTGTGGTGTCCTCGAGTTCATTGCTGAAGAAGGAATGATTTATATGCCTTATTGGGTAGTCATTAAGTGCATTCTGAACTTATTTGTGTTTCCAGCTTGATTTCTTTCCAAGAACATGTGCTGATTTCTTATATTCCTCTACAGATGATGGAGAATATGCTTTTACAGGAGGGAGACGTTGTGAGAGTGAAGAATGTTACACTGCCGAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTCTTGGATATATCCAATCCAAAAGCCATGTGAGTTGCTAAGTATTAATTTCTCATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTCCCCCCAAATTGACTTGAGAAGACCTTGATCATGATTTATGGATAGTATTTTTGTTGAAGAAAACCAAGATTTATCTGATTCTACTTGCTTGGAGAAGAGAGCCTTTGTAGTTTTAGATTTAAAAAGCCCTTTCTCTTAAGTCTCAAAGAAATTTCTTAGAGGTAGAAGTCTAGATTATAATGGATTAAGGAAGGAGTACTACCTTTTCCTCCTCTGTAGGAACCGATGGTTATAGGATAATGTGTGTTCTTGATCAGATGAAAGCAAGGACAATAGAATTTTGGCTTATCTCTGCAAGATGAGGAGGTTACAAGCTTGTTTAGGTAGATATACTGATTATGAGGATGGTTATAAAGTTTGGTTTAAAAGGCCTTTTGAAGAAGAGGACCGAACTAATTGTTTGGGAGTTTGGGTTGGGTAAAGTCCCCAGGTTGGATGGGTTCACTAGAGCAAGAAAGACAGTGACTGGTGGTAAGGGATTAAGATTATCGACCATGTCTTATTTAATTTTGAAGAACATGAGGTCATCATGTCACAATCAGCAAGTACGAAACCAATGTTCATTTTACATCTTAAATAGTTTTCATAATTACCACACTTCAGACATCTCAACCATTCTCCATAACATAATTGAACTGCTAGCAGTATCCAACAAAGGAATCTTCTTTTGGCTTTTCTTTTCATTTTGGTGATTGATGGTCTTAGTTGCCATCTGGACGGAGGTGAGAAGCTTACCCTCATTAATGGTTTTCAAGTTGGGATGAACGAGGTGCACCTTACACTCACCTTTATTTTATTTATTATTATTATTATTATTTTTAAAAATTTTAAAGATCGTCTCACGTTTGAAGATATAGTTTTCCATACTACTATTGCTAGCATTAATTTTATGGAGAGTGAAAGCCAACAGTTTGTCGTTTGTTGATTATTAGTTGATGAATGGACCTAGGCATCATCCCACATTGACTGCTCAACCATCATGGGTTGGCCTAGCGGTAAAAAATGAGATAGTCTCAATAAAATAGCTAAGAGGTCACAGGTTCAATCCATGGTGACCACCTACCTAGGAATTAATATCCTACGAGTTTCTTTGACACCCAAGTGTTGGTAGGGTCAGGTGGGTTATCCCGTGAGATTAGTCGAGGTGGGTGTAAGCTGGCCTGGACACTCACAGATGTTAAAAAATAAGAAAATCTCACACTGACTGCTCCAGTTTCAGTCTCTCTAACGTACGTACGTAAGTTAGCGGTTGAGAAGATTGTCTTAAAGAACTAATAGGTGGAAGTAGGATTTTCTTTCTAATTAGACACTCTGCCGTTACCCCTCCATATTCACTAAAAGAATGAGAAGGTTAAAGTCATATGAAATTTCTTTAGGAAGGTACTGCTGTACTTTGAAGTTGTGAAGAGGGGAGTTGCTCCATTTCTGGTGCAGGGGACATTGTCCCTCTTCAAAAAGGTATGACAGACCCTGATTTTCTGTATGAGGAGAAAGATTAATTGTCTTTGCCTTCTTGTTCTTTAGATTGTAGGTTGCCTTAACCTATTGGAACTCTATGTTCAACGTTTTTAGCGGCGATTCTCAGTGTTTGAAGTAGATCTTCTGAAGGAATCTGACAAAGATGGAGATTCAAATTGGGTTGCATTGGGTGAAACTATTTCATAGATAATGCGAAATTAGAAAGTGAATGAAGACCCCACCCATCCAAAATTTTCTTTATTATCCTAGCTAGGAGCCTCTAGAAGAAGAGGGATCTTGAATAATTTCTCTTTATGAAATCTTAATCCGTTTTGTGGTAGTTTTGTACGTGATGATTTGTTTTAGGGTATTGAGCTCAATCAATTTTGGTTATTGTTTACTGAAGAGCTTTCTTGTAATAACATTCTTCTCTAGGTTGGGAATTTGAATGCCTGTTCCTCCACCCTTGTAAATGTTCTCATGTCGTGTATAGTCTTTTCTCTTTTCTTATACTAAAGAAAAATAGATTTCATGTCCTAAATTTCTAATATTCCTCGGAACATTAGAATATAGACAAGCTTTTTTAACCTGTCTGTCTAATGTATCAATCACATGTCGTCATAATAAATCCCATTATCTGTTGCTTCTATGGATAGAAGTAGACCCTCAGGTTGGTAATGTTTTTGTGTAATCAATATGCAGCTTAGGTTCTTGCCATGAAAATGTAGATGAAGGTAGTTCAATCTACTTTAAACTAGAAGAGTTCACTTATTATAGAGTAAAGCTTCTGAAACTCATGGGTGTAAATCTGGTGCTTTTTTCACGTGTACCAGTAACTTATAAATAAGGAAAGCCCATTCATATGTATTAATTGGATGTGAATGAAAAAACCATCCCATTGACTGTTCAGTTTTTTGTATGTCTAATAGAACCCGAATATATTGAAAGAAAAACGATAATGAATTACAAGATAAACCAAGCGTTCGAGGTACTTAAACCCTCCCGATCTTGAGATACTCTCAAGCCCTAATTCATTCCACCAAGATATTGCTTACCTTCCACCTTCCCTACTCACTCTTTTTATCAAGCCTAGCAAACTCTCTTACTAATTGCTAATATATCCTTATAATATCCCAATTAACATACATATCAATGTCATACAGCTTGGAGACGACTTTGAGAAATTTTTCATGCCTGACAACCGGAGACAGTATCATGGTGGCATATAACAACAAGAAATATTACATTGATATAATTGAAACGAAGCCTTCAAATGCAATAAGTATAATTGAGACTGACTGTGAAGTGGACTTCGCACCTCCCTTGGATTACAAGGAACCTGAAAGGCCTGTTCCATCCCTTCCTACTGGCAAGGCTCCAGTCCAAGGTCAGATCTGATGTTTTTGTGTAGTGACTTCATGAACTTACAAAGCAACATAGTACTAATTATCTTATTGTCTGGGAAAATTTTTATTTTTATCCATATTTGGAACATGACCAAATGCATTTGCATATTCCTTTATCTTACAGATGAGGAACCCCCTGCAGAAGAGGAACCCAAATTCAATCCCTTCACTGGAGTTGGGAGGCGTTTGGATGGGAAACCATCTAAGCAACAGCCACCTCTAACTTCAACTTCAATATCCAAGGACAAGCAAGTTGATAAGAGAACTGTTAGCGGCCAGCCTTCTGCTGGGTCTAGCTCTCAGAATGCTGCCAGGCAGTCCGAAGGGAAGCTCGTTTTTGGAGGAAATGCAAGCCAAACTCCGAAGGAAACTAAGAAGGTTTGGCTGTTTGCTCCGTGTCATTTTAAAGTGTTCTGAAGTACTTTGAACTTATCTATAAACGAGGATTATCCATGATATATGTATATATTTTTTTGGGGTAATTGTACTGGTTAGCATTTTAGAAAATAAAGTGTATAGCAATAATTTTTAAAAATTACAAATAGAGCAAAATCTATCAATGATAAGTTTTATCACTGATAGACTCCTACCAATGATAGAGTTTATCGCTAATAGACTTCGAGAGCAAGATCTAAATTTTGTTACATCTGTAGATTCTTTTACATTGTGTGCTATATCTGCTAATATTTTGAACCTAAGTGTTATATTTATAACTGTCCTTTTTTTTTTTTATAATGTGGGGTAGGGATCAAACCTTTGACCTCGAGGTAGATAGTACAAGCTTATGTCAGTTTAGCTATGCTAATGTTTGGTCAATACTCCTTATCAAACTTCAATCAAAATGATAAACTGACTGTAAATAAGTTGATACTTTCCAGGAAGCTGAAAAAGATGGTAAGCAAGAGCAGCCCAAGGAGAAAGAAGAGCCGAAGTTTCAGCCATTTGGTGGGAAGAAGTATTCATTGAGAGGTTAATTAGATGAATAAACTATTGTTTACATCAACACTATTTTATCCTGTTTCATCTTATATGCTTTTGTGATAGCAACAGTTTTATAAATGAAAAATTTAGCACAAAAATTTCTTTTACATATAAAAAAAAATTGTACATTGGGAAAATCATGAGTCACTGCTTTCAATATCAGAAAGATTTTATTTGCTCTCCCTATTGCCTGCTGTTTGTACCAACAGACATTTAAACTTTGAAGTCTTGAAAGAAAGCATTGTTGTGGCTGTGGCTGTGGCTGTGGCTGGGCAGTATTTGT

mRNA sequence

GACAAATCTCAGCCATTTTGAAGGATATCGGCTGGGTTTCTCTCTTCTCCAATTCTCTCGTCTGAGCTTCCATAAGTCGGTCAGAGCTTCTCTCTCATTTCCGCCATTAAAGGTTCAGGTTTTGGGGTGATACTCTGCAAGAATCTACACTATGTTCTTCGACGGGTATGGATATCATGGGACTTCATTTGAGCAAACATATCGGTGTTATCCTGCATCTTTTATTGAAAAGCCACAACTTGAAACTGGTGACAAAATCATAATGCCACCATCAGCCCTTGATCGCCTTGCATCTTTACATATCGATTATCCAATGTTGTTTGAGCTTCGGAATGATGTTACTGAACGACTTTCCCACTGTGGTGTCCTCGAGTTCATTGCTGAAGAAGGAATGATTTATATGCCTTATTGGATGATGGAGAATATGCTTTTACAGGAGGGAGACGTTGTGAGAGTGAAGAATGTTACACTGCCGAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTCTTGGATATATCCAATCCAAAAGCCATCTTGGAGACGACTTTGAGAAATTTTTCATGCCTGACAACCGGAGACAGTATCATGGTGGCATATAACAACAAGAAATATTACATTGATATAATTGAAACGAAGCCTTCAAATGCAATAAGTATAATTGAGACTGACTGTGAAGTGGACTTCGCACCTCCCTTGGATTACAAGGAACCTGAAAGGCCTGTTCCATCCCTTCCTACTGGCAAGGCTCCAGTCCAAGATGAGGAACCCCCTGCAGAAGAGGAACCCAAATTCAATCCCTTCACTGGAGTTGGGAGGCGTTTGGATGGGAAACCATCTAAGCAACAGCCACCTCTAACTTCAACTTCAATATCCAAGGACAAGCAAGTTGATAAGAGAACTGTTAGCGGCCAGCCTTCTGCTGGGTCTAGCTCTCAGAATGCTGCCAGGCAGTCCGAAGGGAAGCTCGTTTTTGGAGGAAATGCAAGCCAAACTCCGAAGGAAACTAAGAAGGAAGCTGAAAAAGATGGTAAGCAAGAGCAGCCCAAGGAGAAAGAAGAGCCGAAGTTTCAGCCATTTGGTGGGAAGAAGTATTCATTGAGAGGTTAATTAGATGAATAAACTATTGTTTACATCAACACTATTTTATCCTGTTTCATCTTATATGCTTTTGTGATAGCAACAGTTTTATAAATGAAAAATTTAGCACAAAAATTTCTTTTACATATAAAAAAAAATTGTACATTGGGAAAATCATGAGTCACTGCTTTCAATATCAGAAAGATTTTATTTGCTCTCCCTATTGCCTGCTGTTTGTACCAACAGACATTTAAACTTTGAAGTCTTGAAAGAAAGCATTGTTGTGGCTGTGGCTGTGGCTGTGGCTGGGCAGTATTTGT

Coding sequence (CDS)

ATGTTCTTCGACGGGTATGGATATCATGGGACTTCATTTGAGCAAACATATCGGTGTTATCCTGCATCTTTTATTGAAAAGCCACAACTTGAAACTGGTGACAAAATCATAATGCCACCATCAGCCCTTGATCGCCTTGCATCTTTACATATCGATTATCCAATGTTGTTTGAGCTTCGGAATGATGTTACTGAACGACTTTCCCACTGTGGTGTCCTCGAGTTCATTGCTGAAGAAGGAATGATTTATATGCCTTATTGGATGATGGAGAATATGCTTTTACAGGAGGGAGACGTTGTGAGAGTGAAGAATGTTACACTGCCGAAGGGAACTTATGTTAAATTACAACCTCACACAAAGGACTTCTTGGATATATCCAATCCAAAAGCCATCTTGGAGACGACTTTGAGAAATTTTTCATGCCTGACAACCGGAGACAGTATCATGGTGGCATATAACAACAAGAAATATTACATTGATATAATTGAAACGAAGCCTTCAAATGCAATAAGTATAATTGAGACTGACTGTGAAGTGGACTTCGCACCTCCCTTGGATTACAAGGAACCTGAAAGGCCTGTTCCATCCCTTCCTACTGGCAAGGCTCCAGTCCAAGATGAGGAACCCCCTGCAGAAGAGGAACCCAAATTCAATCCCTTCACTGGAGTTGGGAGGCGTTTGGATGGGAAACCATCTAAGCAACAGCCACCTCTAACTTCAACTTCAATATCCAAGGACAAGCAAGTTGATAAGAGAACTGTTAGCGGCCAGCCTTCTGCTGGGTCTAGCTCTCAGAATGCTGCCAGGCAGTCCGAAGGGAAGCTCGTTTTTGGAGGAAATGCAAGCCAAACTCCGAAGGAAACTAAGAAGGAAGCTGAAAAAGATGGTAAGCAAGAGCAGCCCAAGGAGAAAGAAGAGCCGAAGTTTCAGCCATTTGGTGGGAAGAAGTATTCATTGAGAGGTTAA

Protein sequence

MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTSTSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQPKEKEEPKFQPFGGKKYSLRG

Homology

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BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot
Match: Q55BK0 (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.5e-63
Identity = 129/293 (44.03%), Postives = 181/293 (61.77%), Query Frame = 0


Query: 13  FEQTYRCYPASFI--EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLSHC 72
           +EQ ++ +P SF+  EK  LE+G KI++PPSAL+ L+ L+I YPMLFE+ N ++ + SHC
Sbjct: 25  YEQKFKAFPISFLPKEKHSLESGGKILLPPSALNALSRLNIQYPMLFEISNPISGKKSHC 84

Query: 73  GVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNPKA 132
           GVLEFIAEEG+ Y+P WMM+N+ L+EG+ + +KN TL KGT+VK+QP T +F+DISNPKA
Sbjct: 85  GVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNATLAKGTFVKIQPRTSNFIDISNPKA 144

Query: 133 ILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYKEP 192
           +LE +LR F+ LT  D IM+ YNN KYY+ ++E KP+NAISIIE D  VDFAPP+D KE 
Sbjct: 145 VLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKPANAISIIEADVSVDFAPPMDSKEA 204

Query: 193 ERPVPSLP-----------------TGKAPV---------QDEEPPAEEEPKFNPFTGVG 252
             P  S P                 T   P+          D +  +++EPKF  F G G
Sbjct: 205 TSPSTSSPGSHVSGPSKGLTFGPASTSAKPIPGGKKKKDESDSDSDSDDEPKFKAFAGTG 264

Query: 253 RRLDGK---PSKQQPPLTSTSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGK 275
            RLDGK   P    P   +T+ + +   +    +   +  +S+ N  +  + K
Sbjct: 265 ARLDGKVGTPLGTSPKTLNTNNNNNNNNNNNNNNNNNNNNNSNNNNTKNEDTK 317

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BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot
Match: P70362 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2)

HSP 1 Score: 233.8 bits (595), Expect = 2.7e-60
Identity = 118/228 (51.75%), Postives = 156/228 (68.42%), Query Frame = 0


Query: 13  FEQTYRCYPASFIEKP----QLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLS 72
           F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEF+A+EG+ Y+P+WMM+N+LL+EG +V+V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQP 237
           EPERPV    + +   + +      E  F  F+G G RLDGK    +P
Sbjct: 199 EPERPVQHEESIEG--EADHSGYAGEVGFRAFSGSGNRLDGKKKGVEP 244

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BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot
Match: Q9ES53 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.7e-60
Identity = 118/228 (51.75%), Postives = 156/228 (68.42%), Query Frame = 0


Query: 13  FEQTYRCYPASFIEKP----QLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLS 72
           F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEF+A+EG+ Y+P+WMM+N+LL+EG +V+V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQP 237
           EPERPV    + +   + +      E  F  F+G G RLDGK    +P
Sbjct: 199 EPERPVQHEESIEG--EADHSGYAGEVGFRAFSGSGNRLDGKKKGVEP 244

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BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot
Match: Q92890 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3)

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-59
Identity = 117/228 (51.32%), Postives = 155/228 (67.98%), Query Frame = 0


Query: 13  FEQTYRCYPASFIEKP----QLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTERLS 72
           F   YRC+  S +  P     +E G KIIMPPSALD+L+ L+I YPMLF+L N  ++R++
Sbjct: 19  FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78

Query: 73  HCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDISNP 132
           HCGVLEF+A+EG+ Y+P+WMM+N+LL+EG +V+V++V L   TY K QP + DFLDI+NP
Sbjct: 79  HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138

Query: 133 KAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLDYK 192
           KA+LE  LRNF+CLTTGD I + YN K Y + ++ETKP  A+SIIE D  VDF  PL YK
Sbjct: 139 KAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198

Query: 193 EPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQP 237
           EPER V    + +   + +      E  F  F+G G RLDGK    +P
Sbjct: 199 EPERQVQHEESTEG--EADHSGYAGELGFRAFSGSGNRLDGKKKGVEP 244

[Close]

BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot
Match: Q9VTF9 (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Ufd1-like PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.9e-55
Identity = 114/234 (48.72%), Postives = 150/234 (64.10%), Query Frame = 0


Query: 10  GTSFEQTYRCYPASFI---EKPQLETGDKIIMPPSALDRLASLHIDYPMLFELRNDVTER 69
           G +F   Y+C+  S +   E+  +E G KIIMPPSALD L  L+++YPMLF+L N    R
Sbjct: 14  GRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEYPMLFKLTNVKKSR 73

Query: 70  LSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTKDFLDIS 129
            SH GVLEF+A+EG  Y+P+WMMEN+LL EGD++ +++V+LP  T+ K QPH+ DFLDI+
Sbjct: 74  SSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATFSKFQPHSTDFLDIT 133

Query: 130 NPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDFAPPLD 189
           NPKA+LE  LRNF+CLT GD I + YN K Y + ++ETKP NA+SIIE D  V+F  P+ 
Sbjct: 134 NPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVG 193

Query: 190 YKE--PERPVPSLPTGKAPVQDEE----PPAEEEPKFNPFTGVGRRLDGKPSKQ 235
           YK+    +   S   G A     E      A  E     F G G RLDGK  K+
Sbjct: 194 YKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGKKKKE 247

[Close]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL
Match: A0A1S3CF02 (ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499727 PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 1.0e-171
Identity = 307/321 (95.64%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQ+EEPPAE EPKFNPFTGVGRRLDGKPS QQPPL+ 
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQEEEPPAEAEPKFNPFTGVGRRLDGKPSAQQPPLSW 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TSISKDKQVD RTV+GQPSAGS+S+NA+RQSEGKLVFGGNAS+TPKETKKE EKDGKQEQ
Sbjct: 241 TSISKDKQVDTRTVTGQPSAGSTSRNASRQSEGKLVFGGNASRTPKETKKEGEKDGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
           PKEKEE KFQPFGGKKYSLRG
Sbjct: 301 PKEKEEAKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL
Match: A0A5D3BTV4 (Ubiquitin fusion degradation protein 1-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00070 PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 1.0e-171
Identity = 307/321 (95.64%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQ+EEPPAE EPKFNPFTGVGRRLDGKPS QQPPL+ 
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQEEEPPAEAEPKFNPFTGVGRRLDGKPSAQQPPLSW 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TSISKDKQVD RTV+GQPSAGS+S+NA+RQSEGKLVFGGNAS+TPKETKKE EKDGKQEQ
Sbjct: 241 TSISKDKQVDTRTVTGQPSAGSTSRNASRQSEGKLVFGGNASRTPKETKKEGEKDGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
           PKEKEE KFQPFGGKKYSLRG
Sbjct: 301 PKEKEEAKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL
Match: A0A6J1CWL5 (ubiquitin fusion degradation protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111015470 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 302/321 (94.08%), Postives = 312/321 (97.20%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQ+ETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQIETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PV  LPTGKAP+Q+EE PAE EPKFNPFTGVGRRLDGKPSKQQPPL+S
Sbjct: 181 FAPPLDYKEPEKPVAPLPTGKAPIQEEEAPAEAEPKFNPFTGVGRRLDGKPSKQQPPLSS 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TS+SKDKQ+D R VSGQ SAGSSSQNA RQS+GKLVFGGNAS+ PKETKKEAEK+GKQEQ
Sbjct: 241 TSMSKDKQIDTRNVSGQTSAGSSSQNATRQSQGKLVFGGNASRNPKETKKEAEKEGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
           PKEKEEPKFQPFGGKKYSLRG
Sbjct: 301 PKEKEEPKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL
Match: A0A0A0LIX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252040 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 304/321 (94.70%), Postives = 312/321 (97.20%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQDEEPPAE EPKFNPFTG GRRLDGKPS QQ PL+ 
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQDEEPPAEAEPKFNPFTGAGRRLDGKPSMQQAPLSW 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TSISKDKQVD RTV+GQPS+GS+S+NA+RQSEGKLVFGGNAS+TPKETKKE EKDGKQEQ
Sbjct: 241 TSISKDKQVDTRTVTGQPSSGSTSRNASRQSEGKLVFGGNASRTPKETKKEGEKDGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
            KEKEE KFQPFGGKKYSLRG
Sbjct: 301 TKEKEEAKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL
Match: A0A6J1L3W2 (ubiquitin fusion degradation protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111499655 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.2e-165
Identity = 299/322 (92.86%), Postives = 307/322 (95.34%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVV+VKNVTLPKGTYVKLQPHT 
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVQVKNVTLPKGTYVKLQPHTM 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEP++PV SLPTGKAPVQDE+P AE EPKFNPFTGVGRRLDGKPSKQQP L+S
Sbjct: 181 FAPPLDYKEPQKPVASLPTGKAPVQDEQPTAEAEPKFNPFTGVGRRLDGKPSKQQPSLSS 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQE- 300
           TS SKDKQ+D R VSGQPSAGSSSQNA RQS+GKLVFG NAS+ PKETKKE EKDGKQE 
Sbjct: 241 TSASKDKQIDTRNVSGQPSAGSSSQNATRQSQGKLVFGANASRNPKETKKETEKDGKQEQ 300

Query: 301 QPKEKEEPKFQPFGGKKYSLRG 322
           QPKEKEE KFQPF GKKYSLRG
Sbjct: 301 QPKEKEEAKFQPFAGKKYSLRG 322

[Close]

BLAST of Lsi10G004220 vs. NCBI nr
Match: XP_008461020.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo] >XP_008461021.1 PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo] >TYK02604.1 ubiquitin fusion degradation protein 1-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 612.5 bits (1578), Expect = 2.1e-171
Identity = 307/321 (95.64%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQ+EEPPAE EPKFNPFTGVGRRLDGKPS QQPPL+ 
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQEEEPPAEAEPKFNPFTGVGRRLDGKPSAQQPPLSW 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TSISKDKQVD RTV+GQPSAGS+S+NA+RQSEGKLVFGGNAS+TPKETKKE EKDGKQEQ
Sbjct: 241 TSISKDKQVDTRTVTGQPSAGSTSRNASRQSEGKLVFGGNASRTPKETKKEGEKDGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
           PKEKEE KFQPFGGKKYSLRG
Sbjct: 301 PKEKEEAKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. NCBI nr
Match: XP_004150137.1 (ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis sativus] >KGN61855.1 hypothetical protein Csa_006105 [Cucumis sativus])

HSP 1 Score: 605.1 bits (1559), Expect = 3.4e-169
Identity = 304/321 (94.70%), Postives = 312/321 (97.20%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQDEEPPAE EPKFNPFTG GRRLDGKPS QQ PL+ 
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQDEEPPAEAEPKFNPFTGAGRRLDGKPSMQQAPLSW 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TSISKDKQVD RTV+GQPS+GS+S+NA+RQSEGKLVFGGNAS+TPKETKKE EKDGKQEQ
Sbjct: 241 TSISKDKQVDTRTVTGQPSSGSTSRNASRQSEGKLVFGGNASRTPKETKKEGEKDGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
            KEKEE KFQPFGGKKYSLRG
Sbjct: 301 TKEKEEAKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. NCBI nr
Match: XP_022146194.1 (ubiquitin fusion degradation protein 1 homolog [Momordica charantia] >XP_022146195.1 ubiquitin fusion degradation protein 1 homolog [Momordica charantia])

HSP 1 Score: 605.1 bits (1559), Expect = 3.4e-169
Identity = 302/321 (94.08%), Postives = 312/321 (97.20%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQ+ETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQIETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PV  LPTGKAP+Q+EE PAE EPKFNPFTGVGRRLDGKPSKQQPPL+S
Sbjct: 181 FAPPLDYKEPEKPVAPLPTGKAPIQEEEAPAEAEPKFNPFTGVGRRLDGKPSKQQPPLSS 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQEQ 300
           TS+SKDKQ+D R VSGQ SAGSSSQNA RQS+GKLVFGGNAS+ PKETKKEAEK+GKQEQ
Sbjct: 241 TSMSKDKQIDTRNVSGQTSAGSSSQNATRQSQGKLVFGGNASRNPKETKKEAEKEGKQEQ 300

Query: 301 PKEKEEPKFQPFGGKKYSLRG 322
           PKEKEEPKFQPFGGKKYSLRG
Sbjct: 301 PKEKEEPKFQPFGGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. NCBI nr
Match: XP_038901264.1 (ubiquitin fusion degradation protein 1 homolog [Benincasa hispida] >XP_038901265.1 ubiquitin fusion degradation protein 1 homolog [Benincasa hispida])

HSP 1 Score: 603.2 bits (1554), Expect = 1.3e-168
Identity = 307/322 (95.34%), Postives = 314/322 (97.52%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEPE+PVPSLPTGKAPVQDEEPP+E EPKFNPFTGVGRRLDGKPSKQQPPL+S
Sbjct: 181 FAPPLDYKEPEKPVPSLPTGKAPVQDEEPPSEAEPKFNPFTGVGRRLDGKPSKQQPPLSS 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNA-ARQSEGKLVFGGNASQTPKETKKEAEKDGKQE 300
            S+SKDKQVD RTVSGQPSAGSSSQNA  RQSEGKLVFGGNAS+TPKETKKE+ KDG+QE
Sbjct: 241 ASLSKDKQVDTRTVSGQPSAGSSSQNANRRQSEGKLVFGGNASRTPKETKKES-KDGEQE 300

Query: 301 QPKEKEEPKFQPFGGKKYSLRG 322
           QPKEKEE KFQPF GKKYSLRG
Sbjct: 301 QPKEKEELKFQPFAGKKYSLRG 321

[Close]

BLAST of Lsi10G004220 vs. NCBI nr
Match: XP_023533758.1 (ubiquitin fusion degradation protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023533759.1 ubiquitin fusion degradation protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023533760.1 ubiquitin fusion degradation protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.9 bits (1522), Expect = 6.7e-165
Identity = 299/322 (92.86%), Postives = 307/322 (95.34%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVV+VKNVTLPKGTYVKLQPHT 
Sbjct: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVQVKNVTLPKGTYVKLQPHTM 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLTS 240
           FAPPLDYKEP++PV SLPTGKAPVQDE+P AE EPKFNPFTGVGRRLDGKPSKQQP L+S
Sbjct: 181 FAPPLDYKEPQKPVASLPTGKAPVQDEQPAAEAEPKFNPFTGVGRRLDGKPSKQQPSLSS 240

Query: 241 TSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKKEAEKDGKQE- 300
           TS SKDKQ+D R VSGQPSAGSSSQNA RQS+GKLVFG NAS+ PKETKKE EKDGKQE 
Sbjct: 241 TSASKDKQIDSRNVSGQPSAGSSSQNATRQSQGKLVFGSNASRNPKETKKETEKDGKQEQ 300

Query: 301 QPKEKEEPKFQPFGGKKYSLRG 322
           QPKEKEE KFQPF GKKYSLRG
Sbjct: 301 QPKEKEEAKFQPFAGKKYSLRG 322

[Close]

BLAST of Lsi10G004220 vs. TAIR 10
Match: AT2G21270.1 (ubiquitin fusion degradation 1 )

HSP 1 Score: 452.2 bits (1162), Expect = 3.5e-127
Identity = 238/324 (73.46%), Postives = 268/324 (82.72%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGY YHGT+FEQ+YRCYPASFI+KPQLE+GDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           N   ER++HCGVLEFIAEEGMIYMPYWMM+N+LLQEGD+VRV+NVTLPKGTYVKLQPHT 
Sbjct: 61  NAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTT 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILET LRN+SCLT+GDSIMV YNNKKY+IDI+ETKP+NAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERP-VPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLT 240
           FAPPLDYKEPERP  PS    K P + EE   E EPKFNPFTG GRRLDG+P   +P   
Sbjct: 181 FAPPLDYKEPERPTAPS--AAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEP--A 240

Query: 241 STSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKET--KKEAEKDGK 300
             S SK KQ      +GQ S  SSS+ A R ++GKLVFG N ++ PKE   K  A K+ K
Sbjct: 241 PASSSKGKQPVVANGNGQSSVASSSEKATR-AQGKLVFGANGNRAPKEAAPKVGAAKETK 300

Query: 301 QEQPKEKEEPKFQPFGGKKYSLRG 322
           +E+ ++K+EPKFQ F GKKYSLRG
Sbjct: 301 KEEQEKKDEPKFQAFSGKKYSLRG 319

[Close]

BLAST of Lsi10G004220 vs. TAIR 10
Match: AT2G21270.2 (ubiquitin fusion degradation 1 )

HSP 1 Score: 452.2 bits (1162), Expect = 3.5e-127
Identity = 238/324 (73.46%), Postives = 268/324 (82.72%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGY YHGT+FEQ+YRCYPASFI+KPQLE+GDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1   MFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           N   ER++HCGVLEFIAEEGMIYMPYWMM+N+LLQEGD+VRV+NVTLPKGTYVKLQPHT 
Sbjct: 61  NAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTT 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILET LRN+SCLT+GDSIMV YNNKKY+IDI+ETKP+NAISIIETDCEVD
Sbjct: 121 DFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVD 180

Query: 181 FAPPLDYKEPERP-VPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLT 240
           FAPPLDYKEPERP  PS    K P + EE   E EPKFNPFTG GRRLDG+P   +P   
Sbjct: 181 FAPPLDYKEPERPTAPS--AAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEP--A 240

Query: 241 STSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKET--KKEAEKDGK 300
             S SK KQ      +GQ S  SSS+ A R ++GKLVFG N ++ PKE   K  A K+ K
Sbjct: 241 PASSSKGKQPVVANGNGQSSVASSSEKATR-AQGKLVFGANGNRAPKEAAPKVGAAKETK 300

Query: 301 QEQPKEKEEPKFQPFGGKKYSLRG 322
           +E+ ++K+EPKFQ F GKKYSLRG
Sbjct: 301 KEEQEKKDEPKFQAFSGKKYSLRG 319

[Close]

BLAST of Lsi10G004220 vs. TAIR 10
Match: AT2G21270.3 (ubiquitin fusion degradation 1 )

HSP 1 Score: 452.2 bits (1162), Expect = 3.5e-127
Identity = 238/324 (73.46%), Postives = 268/324 (82.72%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MFFDGY YHGT+FEQ+YRCYPASFI+KPQLE+GDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 22  MFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 81

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           N   ER++HCGVLEFIAEEGMIYMPYWMM+N+LLQEGD+VRV+NVTLPKGTYVKLQPHT 
Sbjct: 82  NAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTT 141

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDISNPKAILET LRN+SCLT+GDSIMV YNNKKY+IDI+ETKP+NAISIIETDCEVD
Sbjct: 142 DFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVD 201

Query: 181 FAPPLDYKEPERP-VPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQPPLT 240
           FAPPLDYKEPERP  PS    K P + EE   E EPKFNPFTG GRRLDG+P   +P   
Sbjct: 202 FAPPLDYKEPERPTAPS--AAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEP--A 261

Query: 241 STSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKET--KKEAEKDGK 300
             S SK KQ      +GQ S  SSS+ A R ++GKLVFG N ++ PKE   K  A K+ K
Sbjct: 262 PASSSKGKQPVVANGNGQSSVASSSEKATR-AQGKLVFGANGNRAPKEAAPKVGAAKETK 321

Query: 301 QEQPKEKEEPKFQPFGGKKYSLRG 322
           +E+ ++K+EPKFQ F GKKYSLRG
Sbjct: 322 KEEQEKKDEPKFQAFSGKKYSLRG 340

[Close]

BLAST of Lsi10G004220 vs. TAIR 10
Match: AT4G38930.2 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-120
Identity = 226/323 (69.97%), Postives = 254/323 (78.64%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MF+DGY YHGT+FEQTYRCYP+SFI+KPQ+E+GDKIIMPPSALDRLASL IDYPMLFELR
Sbjct: 1   MFYDGYAYHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           N  T+  SHCGVLEFIAEEG+IY+PYWMM+N+LLQEGD+VRV+NVTLPKGTYVKLQPHT 
Sbjct: 61  NASTDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTT 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDI+NPKAILET LRN+SCLT GDSIMV YNNKKY+IDI+E KPSN ISIIETDCEVD
Sbjct: 121 DFLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQP-PLT 240
           FAPPLDYKEPERPV   P        E   AE EPKFNPFTG GRRLDG+P   +P P  
Sbjct: 181 FAPPLDYKEPERPVAPAPAKGEAKAKEVDVAEAEPKFNPFTGSGRRLDGRPLSYEPQPGA 240

Query: 241 STSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKK-EAEKDGKQ 300
           + S  +   V         S+ S S+ A +Q+ GKLVFG N  ++ KET K  A KD KQ
Sbjct: 241 ANSNGQSHPV-------ASSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGAGKDRKQ 300

Query: 301 EQPKEKEEPKFQPFGGKKYSLRG 322
           E+  EK E KFQ F GKKYSLRG
Sbjct: 301 EEEAEK-EAKFQAFSGKKYSLRG 315

[Close]

BLAST of Lsi10G004220 vs. TAIR 10
Match: AT4G38930.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 426.0 bits (1094), Expect = 2.7e-119
Identity = 228/323 (70.59%), Postives = 256/323 (79.26%), Query Frame = 0


Query: 1   MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60
           MF+DGY YHGT+FEQTYRCYP+SFI+KPQ+E+GDKIIMPPSALDRLASL IDYPMLFELR
Sbjct: 1   MFYDGYAYHGTTFEQTYRCYPSSFIDKPQIESGDKIIMPPSALDRLASLQIDYPMLFELR 60

Query: 61  NDVTERLSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120
           N  T+  SHCGVLEFIAEEG+IY+PYWMM+N+LLQEGD+VRV+NVTLPKGTYVKLQPHT 
Sbjct: 61  NASTDSFSHCGVLEFIAEEGVIYIPYWMMQNLLLQEGDMVRVRNVTLPKGTYVKLQPHTT 120

Query: 121 DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180
           DFLDI+NPKAILET LRN+SCLT GDSIMV YNNKKY+IDI+E KPSN ISIIETDCEVD
Sbjct: 121 DFLDIANPKAILETALRNYSCLTVGDSIMVPYNNKKYFIDIVEAKPSNGISIIETDCEVD 180

Query: 181 FAPPLDYKEPERPVPSLPTGKAPVQDEEPPAEEEPKFNPFTGVGRRLDGKPSKQQP-PLT 240
           FAPPLDYKEPERPV   P  KA    E   AE EPKFNPFTG GRRLDG+P   +P P  
Sbjct: 181 FAPPLDYKEPERPVAPAP-AKA---KEVDVAEAEPKFNPFTGSGRRLDGRPLSYEPQPGA 240

Query: 241 STSISKDKQVDKRTVSGQPSAGSSSQNAARQSEGKLVFGGNASQTPKETKK-EAEKDGKQ 300
           + S  +   V         S+ S S+ A +Q+ GKLVFG N  ++ KET K  A KD KQ
Sbjct: 241 ANSNGQSHPV-------ASSSSSGSEKATQQNRGKLVFGSNVERSTKETTKVGAGKDRKQ 300

Query: 301 EQPKEKEEPKFQPFGGKKYSLRG 322
           E+  EK E KFQ F GKKYSLRG
Sbjct: 301 EEEAEK-EAKFQAFSGKKYSLRG 311

The following BLAST results are available for this feature:

BLAST of Lsi10G004220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55BK0	4.5e-63	44.03	Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44...	[more]
P70362	2.7e-60	51.75	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus muscu...	[more]
Q9ES53	2.7e-60	51.75	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus no...	[more]
Q92890	1.8e-59	51.32	Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapi...	[more]
Q9VTF9	5.9e-55	48.72	Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=722...	[more]

BLAST of Lsi10G004220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CF02	1.0e-171	95.64	ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5D3BTV4	1.0e-171	95.64	Ubiquitin fusion degradation protein 1-like protein isoform X1 OS=Cucumis melo v...	[more]
A0A6J1CWL5	1.7e-169	94.08	ubiquitin fusion degradation protein 1 homolog OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LIX2	1.7e-169	94.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252040 PE=3 SV=1	[more]
A0A6J1L3W2	4.2e-165	92.86	ubiquitin fusion degradation protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Lsi10G004220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461020.1	2.1e-171	95.64	PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis me...	[more]
XP_004150137.1	3.4e-169	94.70	ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis sativus] >KGN...	[more]
XP_022146194.1	3.4e-169	94.08	ubiquitin fusion degradation protein 1 homolog [Momordica charantia] >XP_0221461...	[more]
XP_038901264.1	1.3e-168	95.34	ubiquitin fusion degradation protein 1 homolog [Benincasa hispida] >XP_038901265...	[more]
XP_023533758.1	6.7e-165	92.86	ubiquitin fusion degradation protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_...	[more]

BLAST of Lsi10G004220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21270.1	3.5e-127	73.46	ubiquitin fusion degradation 1	[more]
AT2G21270.2	3.5e-127	73.46	ubiquitin fusion degradation 1	[more]
AT2G21270.3	3.5e-127	73.46	ubiquitin fusion degradation 1	[more]
AT4G38930.2	4.1e-120	69.97	Ubiquitin fusion degradation UFD1 family protein	[more]
AT4G38930.1	2.7e-119	70.59	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.330.10		coord: 109..182 e-value: 1.6E-34 score: 119.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..311
None	No IPR available	PANTHER	PTHR12555:SF23	UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG	coord: 1..321
IPR004854	Ubiquitin fusion degradation protein Ufd1-like	PFAM	PF03152	UFD1	coord: 13..184 e-value: 6.2E-80 score: 266.7
IPR004854	Ubiquitin fusion degradation protein Ufd1-like	PANTHER	PTHR12555	UBIQUITIN FUSION DEGRADATON PROTEIN 1	coord: 1..321
IPR042299	Ufd1-like, Nn domain	GENE3D	2.40.40.50		coord: 6..107 e-value: 1.1E-43 score: 149.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004220.1	Lsi10G004220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding