Lsi10G004130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G004130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Squalene synthase
Location	chr10: 6270730 .. 6277329 (+)
RNA-Seq Expression	Lsi10G004130
Synteny	Lsi10G004130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAACAGCGAAAGGAAGAAGACGACTGAAAAGTGATTGTCATTTGAATTTGAGGCCTCAAAAAATTTCTTATTCAAAACGCCCCTTTGTTAATAATTCACCATTGATCAGAGAGGGCTCTCTGTCTACAAGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTCTTACCAATGTCTGATTACAGGAAGGATCTCAATAAACATTTTGATTTTGATTTTGCACAGCGATAAAATCAATAAACAACTAGCCAAACTCTTTTTTCAAACTTCCCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTCCACATATCTGAAAACAACCCTTCATTCGATTTTCAGTCATTTGGGTTTGAATCATTCTTTTCTATTCGCTTTCTACTTTGGATTTCTCATCATCAACTGAAGAATAGGAATCCCATTTGAGGAATTGGATATTTGTTCTGTGGGTTGACCGGCGAGAGATCTGAAGCTCTGTGGATTTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTCTGAAACTGAAAATAGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATAGCATGCTGCATAAGGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTAAGTTGAAGATCAAGTGTTCAACATCTTTTTTTTTTTTTCCTATTCATAATACTGATAGTTTGGTGTTTGTTTAGTTGAATGAATCTGTTTCATTTTCTGGGTTTCTGGTGTTGATGATGTTGAAATCCATATACCAGCTCTCATGGGTTTTCTTTTTGAACAATTTGGAGGATTGATCGTTTGTTTGCAACGTTCTTAGGGAAGAAAAATATTGATAGGCGTAGAATCTGATTTACGGAGGAATATCCAATTTATAGCTCAAATATCGCCATCATAATCCTGTTGGGAAGTAAAATAATGGATTTAGGATTATTGAAAATCACACTCTATTTTTCAAATCATAATATTATATCTCAATTAATTTTAATAAAACTAGTACCATGCACTCATAGAAGCTGCCCAGGTTAATTCTATGGAATTGTAGTGTTCCTTGATTTAGCAAAGCACAACAATATTTGAAACTATTCGTGAAGTAGGCAAACTAAATGAATTTGATTTGTAGTTATCCCTTAAATAAGATATCTTCGTCTTACAATTTATTTAAATTGAGACCATCTATTCGTGGACTTTTACGTGATACAGAAAAAAAGAAATACATAATTTTGGACATTTCAATTTTTCTCACGAAATTGCCAATAATGTTAAACTGTACTTGTACAACAACCAAGTGGTTCCACTAGTTTCATGGATAGTATCTACTGGCCAAAGCTTTGCTTGTCATGTTTACAGATCTTTCATCACTGTGAAATCTTTCTAGTTTCATTTCCTTAATACTATAATACACCTGTAATTATGCCAGTATTCCTTTTCTTCAAAGCTATGCTGGGTTTTATTTGTTTATTTTGGGATGCGTCAATCAATTTGTCTTTATTGCATTGGATTGTAGTACACATAGTAGCTCTTACAACACAATCTCAGTGTTTGTTTGTCCAGTAGTTATGGAAGTGTATGTGTCTGTTTATCCATCATAATATTTCTTAGCTTATCATTTTTGTTTATTTGCAGGTATGTATATTTTATCTTGTTCTGCGAGCCCTCGACACTGTTGGTATGTAAGGAGCTCTTTACTTCTTTTTGTATGCGAGTATGAGTTCCTAATGTACGCATTGTTATCCTTAAGTTTGAGAAATTTAATGGTTTTTTCTCCTATAGTAATTAATGCAGGTGGAATAATAACTAGATTGCCATCTTGGTTGCGTTATATTGTGTTTTAGTTCCCCCTTTAGCATATATCTCATATTATCTTACTCCTACTAAATTAACTTAAGTTCATTACTCTAAGTTTGTAAACTTAATTTATTTCAAGTTCTCACTCGAGTACTCACACTCCTGATAGTTGGCAATTTCACTTGAAGACAATCCTCCTATCTTAATATGTTACTTAATTGATAAAAACTATTTTTTCTTCTTTGCAATTATATAGATACATGTGTATGTATGAAGAACATGTAGAATTTCGTGTTTGTTTTGTTTTGATGTGGATTAGCCTAATGGTCCTATTATCATAGAGATTTTTCAGTTGATGGCGTTTGCTTCTCTCCTTAGGCTTCACGTTGCATCTTTCATTTTGTACCTCTCGGGTTTCCTGAAAGATTGTCCCTGTCGTCCTGATAGATGTTTTCAAACTGATCTAGCATTGATATTTTCTTTACAGAGGATGATACAGGCATACAAACAGACATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGTAAGTTTTGTACTAGTAATTCTGTCCTCTCTTTAGAATTAAAAAACAAATTAATAAAAGGGGCAGTTGCAAATATAGCAATCAGACCCAAAGTATTAGCAGATATAGCACAATGCAAAAGAATTTGCAGATATAGTAAAATTTAGATCTAGCTCCCTGAGTCTATCACTGGTAGATTCTGCTATATTTGCAATTTGCTATAGACTTAATTATTATTTCTAGTAGTGCTACCCATTGCAATTACCCTTATGTTGCATGTGTTCTTTTTTCTATATTTAGGTGGCACAAAGGACTACAAAGTTCTTATGGACGAGTTTCATCATGTGTCAACTGCGTTTCTAGAACTTGGGAAAGGGTTTGTTACTGAAACCTACTGATTCCTGTCTGGTTCTTTCTGACAAAGACAGTAATTATTTATTGATCAATGTTTATAGCAGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCCACACACACACACACACACACACTCACATTTTCTTCTGGCTTTGGGATTTTTTAAAGATCTTCAATAAACTGCAATTAATGGTTCAGGGATGGTGGTACATTAATGACTTGATGTTCTTTCTGAATTTGATTTACAATTATTTCTGTTTTCTTATTTGCCTTCTTTTAAAAGAAGAAACAAACTTTTATGTTTACAAGAAAGAAAACTACAAGAGATTAGTGGAACTAGTTGTCCAAATCTAGAGTAACCTTTTCATTTTGGTATCAAATAAAAGGCCTCCAACTTGTCAAAGTTCTTAAAACGGAACATCAGAAAATCCTTCTGCATACTCTCTGATTCTCACTAAAAGTTCTTCCTGTTTAACTCACTATGCTTAATTGCTTCTGCAGGTACCAGGAAGCGATTGAGGATATCACAAAACGGATGGGTGCAGGAATGGCTAAATTCATTTGCCAAGAGGTACAACATGAGTCTGTCCTTTCTTTGCATTGCATTTGTGCCATTTTTGTAGCACTAGTCTATCAATAAGACCTGCTTAGGGGCAGTTAATATTAATGCTCTTAAACTAATTCCGGTTGATTTATTCAACGTGTGAATATTACTCATTTTCTTTTTCCTTCCTACATAATAGAGTAGTAAATCAGTGAAGCAAGGAACTTGGCGGAAGTAATGTATTGATTGGTGAAGAGACTGAAACATTTCTTCTCTTCTTGTAGGTTGAGACAGTTGATGATTATGACGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAATTAGAGGACTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGGTCAACTATTATAACCTAAGTGATCGTTGTTCTTTCAAATAGTTTATTAACTTGTATTGAAGTTTGACTCTGATATACTCATTTTTTAACTATTATAACACAGAAAACAAACATTATCCGGGATTACTTGGAGGACATTAATGAGATACCAAAGTCTCGGATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGTGCATAAGTCTATATGCCTTTTGCCTTTTGCCTTCTACTTTCTAATTCTTCTACCGTCTTTTCATCTGATTTGCTTGTTTCACCATTTTTTGCCTTACAGGATTTTAAATATGAGGAGAATTCAGTGAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGGGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGGTATGAAATTTTTTGATTTCATGTAGGATAAGTCGTAAGCAAGAATTTCCCCTGATGACGTGTTTCGTACCTTGACCTCCTTCTAATGACTTTTGAAGCAAGAATCAACTTTTCCAACCATGCTTGCTTGTATGAAATAATGATTTCAATTCCATTAACAATTTTATATACCAGAGAAAGAAATCACCAACACTTTTTAATCATTTAAGTTCATTATATGTACATATTTCATACTTGATATTGAAGCAATGGTCCTTTATGACACAGTTAAGTATAAAATCTGAACCAATATTTTCTCCAAACACGTATAGTCGATTTTGATATAAATAAATGCCGCTGTATATCTCTTTCATGCCAAGAACAGTGTTTTAACATTTTTGTAAAAGTAATTATCCAGATTGGGATTTTCTTGATAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAACGTGGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTAAGATTTTCATTTACAGTTACATTTTTTTAACAAATAATTTGTAAAAAAAGAAATTCCAAAAGGAGTGCACCAATTTGGAGAGAAGTAAAAGAAGAAAGCTTTTTCAGAAACTAGCCATAGTTTGAATATGTATGGCTTTTGTTCTGTAGGTCTTACTGCTAAGGTCATTGATCGAACGAAAACGATGGCTGACGTCTATGGAGCTTTCTTCGATTTCTCTGTTATGCTGAAGGCTAAGGTAGAAATCTCCCTGTCAGACTCAGCGATTGCTCAGTGATCGCACATCGCTTTTTTCCATAAATATCAGAGCTTATCACATCATCATCTAAAGTTGCTTTACAAAACTAACATCCTTGGGTGCTACAGGTCAACAACAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAAAATGCAAGCAGTCGGGACTCTTGAACAAGAGGTTCGTGTTATCCGTCCTCAAGTCTCTCTCTTTGCTATCTTTCAACCTTAAATTCCTCTGTGCCCTCTGAAAATCTTTCATCTGTGTTATTGTTCACCAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAACCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATATCGTTATAACACACGAATATCTGATGATGTTTGTGTTGTTCCAATCCAGATTGTCATACTTTTCAGCCTATTATGCATCATTCTTGCTTATCTCTCTGCGAAACGGTTACCAGCCAATCAATCCGTATGAGCGTCAAACTCCAGTAAGTTTCGTACCAATGGGACTACTGATTACAAAGGACACCAATCAAACACAAGAATATATCTAGTCGTTTATAGTTCTAACTTCAGTTTCTTTGAATGCAGTATACGAGTTTCAACCGAACACACCGCAAACGTGCACGGTATGATTCAGTTTCTGGCTCCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTAACTGTTTGTTTAGTACAGAGCAGGAAACAAGTGAAATCCTGTAACCTTCTAATGGATGTAGTGTAATGGTTGACATGGAAATAAGCTTGTTGTTCATCTTTTTTTTCAATCTTCTAATAAGGGATTGAGTCTTGGAATTAAAATCTCTTCATATCAGTAAGTTACAATGAACAAATGGTATGCATCTCTTTCTGTTTCTA

mRNA sequence

AAATAAACAGCGAAAGGAAGAAGACGACTGAAAAGTGATTGTCATTTGAATTTGAGGCCTCAAAAAATTTCTTATTCAAAACGCCCCTTTGTTAATAATTCACCATTGATCAGAGAGGGCTCTCTGTCTACAAGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTCTTACCAATGTCTGATTACAGGAAGGATCTCAATAAACATTTTGATTTTGATTTTGCACAGCGATAAAATCAATAAACAACTAGCCAAACTCTTTTTTCAAACTTCCCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTCCACATATCTGAAAACAACCCTTCATTCGATTTTCAGTCATTTGGGTTTGAATCATTCTTTTCTATTCGCTTTCTACTTTGGATTTCTCATCATCAACTGAAGAATAGGAATCCCATTTGAGGAATTGGATATTTGTTCTGTGGGTTGACCGGCGAGAGATCTGAAGCTCTGTGGATTTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTCTGAAACTGAAAATAGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATAGCATGCTGCATAAGGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGTATATTTTATCTTGTTCTGCGAGCCCTCGACACTGTTGGTATGTACCAGGAAGCGATTGAGGATATCACAAAACGGATGGGTGCAGGAATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGATGATTATGACGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAATTAGAGGACTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGGGATTACTTGGAGGACATTAATGAGATACCAAAGTCTCGGATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTGAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGGGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAACGTGGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACGAAAACGATGGCTGACGTCTATGGAGCTTTCTTCGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAACAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAAAATGCAAGCAGTCGGGACTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAACCCAGCTGTGATTGTCATACTTTTCAGCCTATTATGCATCATTCTTGCTTATCTCTCTGCGAAACGGTTACCAGCCAATCAATCCTATACGAGTTTCAACCGAACACACCGCAAACGTGCACGGTATGATTCAGTTTCTGGCTCCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTAACTGTTTGTTTAGTACAGAGCAGGAAACAAGTGAAATCCTGTAACCTTCTAATGGATGTAGTGTAATGGTTGACATGGAAATAAGCTTGTTGTTCATCTTTTTTTTCAATCTTCTAATAAGGGATTGAGTCTTGGAATTAAAATCTCTTCATATCAGTAAGTTACAATGAACAAATGGTATGCATCTCTTTCTGTTTCTA

Coding sequence (CDS)

ATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTCTGAAACTGAAAATAGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATAGCATGCTGCATAAGGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGTATATTTTATCTTGTTCTGCGAGCCCTCGACACTGTTGGTATGTACCAGGAAGCGATTGAGGATATCACAAAACGGATGGGTGCAGGAATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGATGATTATGACGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAATTAGAGGACTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGGGATTACTTGGAGGACATTAATGAGATACCAAAGTCTCGGATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTGAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGGGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAACGTGGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACGAAAACGATGGCTGACGTCTATGGAGCTTTCTTCGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAACAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAAAATGCAAGCAGTCGGGACTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAACCCAGCTGTGATTGTCATACTTTTCAGCCTATTATGCATCATTCTTGCTTATCTCTCTGCGAAACGGTTACCAGCCAATCAATCCTATACGAGTTTCAACCGAACACACCGCAAACGTGCACGGTATGATTCAGTTTCTGGCTCCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTAACTGTTTGTTTAGTACAGAGCAGGAAACAAGTGAAATCCTGTAACCTTCTAATGGATGTAGTGTAA

Protein sequence

MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVGMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRIEAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSYTSFNRTHRKRARYDSVSGSIIFLRALFKYYNGCKLTVCLVQSRKQVKSCNLLMDVV

Homology

[Close]

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot
Match: A0A1P7Y0A8 (Squalene synthase 12 OS=Panax ginseng OX=4054 GN=SS12 PE=2 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 5.3e-165
Identity = 294/415 (70.84%), Postives = 326/415 (78.55%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           +LR+AVCIFYLVLRALDTV                                         
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+  EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQ 362
           EAIQ+ CK+SG L+KRK Y++ SE  +N A+I I+F +L I+ AYLS+  LP  Q
Sbjct: 361 EAIQKTCKESGTLSKRKSYIIESESGHNSALIAIIFIILAILYAYLSSNLLPNKQ 415

[Close]

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot
Match: C9E894 (Squalene synthase 2 OS=Panax ginseng OX=4054 GN=SS2 PE=2 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 5.9e-164
Identity = 296/409 (72.37%), Postives = 323/409 (78.97%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           +LR+AVCIFYLVLRALDTV                                         
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPILMAFHRHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSGYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+  EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIM+IGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMSIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 355
           YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYGAFFDFS MLK+KV+N+DPNA+KTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGAFFDFSCMLKSKVDNNDPNATKTLSRL 360

[Close]

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot
Match: D2K762 (Squalene synthase 3 OS=Panax ginseng OX=4054 GN=SS3 PE=2 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 5.9e-164
Identity = 295/409 (72.13%), Postives = 322/409 (78.73%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           +LR+AVCIFYLVLRALDTV                                         
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+  EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSGKAVQCLNDMVTNALLHVEDCLKYMSDLRDPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 355
           YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYG FFDFS MLK+KV+N+DPNA+KTLSR+
Sbjct: 301 YNNIQVFRGVVKMRRGLTAKVIDRTNTMSDVYGTFFDFSCMLKSKVDNNDPNATKTLSRL 360

[Close]

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot
Match: A0A1P7Y0D0 (Squalene synthase 13 OS=Panax ginseng OX=4054 GN=SS13 PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.0e-163
Identity = 292/411 (71.05%), Postives = 324/411 (78.83%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPSEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           +LR+AVCIFYLVLRALDTV                                         
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSISTEVKVPIVMAFHCHIYDNDWHFSCGTKEYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          Y+EAIEDIT RMGAGMAKFIC+EVET+DDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLDLGSSYKEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+  EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 358
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

[Close]

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot
Match: O48666 (Squalene synthase 1 OS=Panax ginseng OX=4054 GN=SS1 PE=2 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 2.2e-163
Identity = 291/411 (70.80%), Postives = 324/411 (78.83%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHP+DFYPLLKLK AARHAEKQIPPEPHW FCYSMLHKVSRSF LVIQQL P
Sbjct: 1   MGSLGAILKHPEDFYPLLKLKFAARHAEKQIPPEPHWAFCYSMLHKVSRSFGLVIQQLGP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           +LR+AVCIFYLVLRALDTV                                         
Sbjct: 61  QLRDAVCIFYLVLRALDTVEDDTSIPTEVKVPILMAFHRHIYDKDWHFSCGTKEYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDIT RMGAGMAKFIC+EVET++DYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSNAFLELGSGYQEAIEDITMRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHA+  EDLA DSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKL
Sbjct: 181 SKLFHASGAEDLATDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVDKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           ED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Sbjct: 241 EDLKYEENSAKAVQCLNDMVTDALVHAEDCLKYMSDLRGPAIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 358
           +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+N+DPNA+KTLSR+
Sbjct: 301 FNNTQVFRGVVKMRRGLTAKVIDQTKTMSDVYGAFFDFSCLLKSKVDNNDPNATKTLSRL 360

[Close]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL
Match: A0A5A7TS05 (Squalene synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00350 PE=3 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 5.1e-195
Identity = 354/423 (83.69%), Postives = 363/423 (85.82%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSYTSF 370
           EAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSY + 
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSYMNS 420

[Close]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL
Match: A0A2R2WEW0 (Squalene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.3e-193
Identity = 351/416 (84.38%), Postives = 359/416 (86.30%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLCIILAYLSAKRLPANQS
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFSLLCIILAYLSAKRLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL
Match: A0A0A0LIW1 (Squalene synthase OS=Cucumis sativus OX=3659 GN=Csa_2G251460 PE=3 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 3.7e-193
Identity = 350/416 (84.13%), Postives = 359/416 (86.30%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLCIILAYLSAKRLPANQS
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFSLLCIILAYLSAKRLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL
Match: A0A2R2WEW2 (Squalene synthase OS=Benincasa hispida var. chieh-qua OX=1208597 PE=2 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 6.3e-193
Identity = 352/416 (84.62%), Postives = 360/416 (86.54%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTV----GM----------------------------------- 120
           ELRNAVCIFYLVLRALDTV    G+                                   
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 ---------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLL IILAYLSAK+LPANQS
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLRIILAYLSAKQLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL
Match: A0A1S3CD95 (Squalene synthase OS=Cucumis melo OX=3656 GN=LOC103499718 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.1e-192
Identity = 350/416 (84.13%), Postives = 358/416 (86.06%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. NCBI nr
Match: KAA0045628.1 (squalene synthase-like [Cucumis melo var. makuwa] >TYK02627.1 squalene synthase-like [Cucumis melo var. makuwa])

HSP 1 Score: 690.3 bits (1780), Expect = 1.1e-194
Identity = 354/423 (83.69%), Postives = 363/423 (85.82%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPE HWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSYTSF 370
           EAIQQ C+QSGL+NKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSY + 
Sbjct: 361 EAIQQTCQQSGLMNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQSYMNS 420

[Close]

BLAST of Lsi10G004130 vs. NCBI nr
Match: XP_038902127.1 (squalene synthase 12-like [Benincasa hispida])

HSP 1 Score: 688.0 bits (1774), Expect = 5.2e-194
Identity = 353/416 (84.86%), Postives = 361/416 (86.78%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTV----GM----------------------------------- 120
           ELRNAVCIFYLVLRALDTV    G+                                   
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 ---------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAK+LPANQS
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKQLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. NCBI nr
Match: ARE29887.1 (squalene synthase [Cucumis sativus] >ARE29888.1 squalene synthase [Cucumis sativus])

HSP 1 Score: 685.6 bits (1768), Expect = 2.6e-193
Identity = 351/416 (84.38%), Postives = 359/416 (86.30%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLCIILAYLSAKRLPANQS
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFSLLCIILAYLSAKRLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. NCBI nr
Match: XP_011649260.1 (squalene synthase 12 [Cucumis sativus] >XP_031737126.1 squalene synthase 12 [Cucumis sativus] >XP_031737127.1 squalene synthase 12 [Cucumis sativus] >XP_031737128.1 squalene synthase 12 [Cucumis sativus] >KGN61845.1 hypothetical protein Csa_006685 [Cucumis sativus])

HSP 1 Score: 684.1 bits (1764), Expect = 7.6e-193
Identity = 350/416 (84.13%), Postives = 359/416 (86.30%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQLKP
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVCIFYLVLRALDTV                                         
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAA+LEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN++DPNASKTLSRI
Sbjct: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQ+ CKQSG+LN+RKLYVVRSEPM+NPAVIVILFSLLCIILAYLSAKRLPANQS
Sbjct: 361 EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFSLLCIILAYLSAKRLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. NCBI nr
Match: ARE29889.1 (squalene synthase [Benincasa hispida var. chieh-qua])

HSP 1 Score: 683.3 bits (1762), Expect = 1.3e-192
Identity = 352/416 (84.62%), Postives = 360/416 (86.54%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCY+MLH+VSRSFALVIQQL+P
Sbjct: 1   MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHRVSRSFALVIQQLEP 60

Query: 61  ELRNAVCIFYLVLRALDTV----GM----------------------------------- 120
           ELRNAVCIFYLVLRALDTV    G+                                   
Sbjct: 61  ELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD 120

Query: 121 ---------------YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240
           SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
Sbjct: 181 SKLFHAAKLEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL 240

Query: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300
           EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Sbjct: 241 EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC 300

Query: 301 YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLSRI 360
           YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVN+SDPNASKTLSRI
Sbjct: 301 YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI 360

Query: 361 EAIQQKCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLCIILAYLSAKRLPANQS 363
           EAIQQ CKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLL IILAYLSAK+LPANQS
Sbjct: 361 EAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVIVILFSLLRIILAYLSAKQLPANQS 416

[Close]

BLAST of Lsi10G004130 vs. TAIR 10
Match: AT4G34640.1 (squalene synthase 1 )

HSP 1 Score: 538.5 bits (1386), Expect = 4.8e-153
Identity = 278/410 (67.80%), Postives = 311/410 (75.85%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSLG +L++PDD YPLLK+K A   AEKQIPPEPHWGFCYSMLHKVSRSF+LVIQQL  
Sbjct: 1   MGSLGTMLRYPDDIYPLLKMKRAIEKAEKQIPPEPHWGFCYSMLHKVSRSFSLVIQQLNT 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVC+FYLVLRALDTV                                         
Sbjct: 61  ELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPILIAFHRHIYDTDWHYSCGTKEYKILMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIE+IT+RMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL
Sbjct: 121 QFHHVSAAFLELEKGYQEAIEEITRRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
           SKLF AA  E L PD  ++SNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD
Sbjct: 181 SKLFLAAGSEVLTPDWEAISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240

Query: 241 KLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA 300
           KLED KYEEN+ K+VQCLN++VTNAL H+EDCLKYM +LRD SIFRFCAIPQIMAIGTLA
Sbjct: 241 KLEDLKYEENTNKSVQCLNEMVTNALMHIEDCLKYMVSLRDPSIFRFCAIPQIMAIGTLA 300

Query: 301 LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLS 355
           LCYNN +VFRGVVK+RRGLTAKVIDRTKTMADVYGAF+DFS MLK KV+ +DPNASKTL+
Sbjct: 301 LCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKNDPNASKTLN 360

[Close]

BLAST of Lsi10G004130 vs. TAIR 10
Match: AT4G34650.1 (squalene synthase 2 )

HSP 1 Score: 502.7 bits (1293), Expect = 2.9e-142
Identity = 260/413 (62.95%), Postives = 308/413 (74.58%), Query Frame = 0


Query: 1   MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLKP 60
           MGSL  IL+HPD+ YPLLKLK+A   A+KQIP EPH  FCYS+LHKVS+SF+LVIQQL  
Sbjct: 1   MGSLSTILRHPDELYPLLKLKLAITKAQKQIPLEPHLAFCYSILHKVSKSFSLVIQQLGT 60

Query: 61  ELRNAVCIFYLVLRALDTV----------------------------------------- 120
           ELRNAVC+FYL+LRALDTV                                         
Sbjct: 61  ELRNAVCVFYLILRALDTVEDDTSVPVEIKVPILIAFHRHIYDGDWHFSCGTKEYKLLMD 120

Query: 121 -------------GMYQEAIEDITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGL 180
                          YQEAIEDITKRMGAGMAKFIC+EVET+DDYDEYCHY AGLVGLGL
Sbjct: 121 QFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYAAGLVGLGL 180

Query: 181 SKLFHAAKLEDLAPD--SLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYAD 240
           SK+F A++LE L PD   +SNS GLFLQKTNII+DYLEDINE PKSRMFWPREIWGKY D
Sbjct: 181 SKIFIASELEILTPDWKQISNSTGLFLQKTNIIKDYLEDINERPKSRMFWPREIWGKYVD 240

Query: 241 KLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA 300
           KLEDFK EE + KAVQCLN++VTNALNHVEDCLK +++LRD +IF+ CAIPQI+AIGTLA
Sbjct: 241 KLEDFKNEEKATKAVQCLNEMVTNALNHVEDCLKSLASLRDPAIFQSCAIPQIVAIGTLA 300

Query: 301 LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNNSDPNASKTLS 357
           LCYNNV+VFRGVV++RRGL AKVIDRTKTM DVYGAF+DFS ML+ KV+N+DPNA KTL+
Sbjct: 301 LCYNNVQVFRGVVRLRRGLIAKVIDRTKTMDDVYGAFYDFSCMLQTKVDNNDPNAMKTLN 360

The following BLAST results are available for this feature:

BLAST of Lsi10G004130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1P7Y0A8	5.3e-165	70.84	Squalene synthase 12 OS=Panax ginseng OX=4054 GN=SS12 PE=2 SV=1	[more]
C9E894	5.9e-164	72.37	Squalene synthase 2 OS=Panax ginseng OX=4054 GN=SS2 PE=2 SV=1	[more]
D2K762	5.9e-164	72.13	Squalene synthase 3 OS=Panax ginseng OX=4054 GN=SS3 PE=2 SV=1	[more]
A0A1P7Y0D0	1.0e-163	71.05	Squalene synthase 13 OS=Panax ginseng OX=4054 GN=SS13 PE=2 SV=1	[more]
O48666	2.2e-163	70.80	Squalene synthase 1 OS=Panax ginseng OX=4054 GN=SS1 PE=2 SV=1	[more]

BLAST of Lsi10G004130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TS05	5.1e-195	83.69	Squalene synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00...	[more]
A0A2R2WEW0	1.3e-193	84.38	Squalene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A0A0LIW1	3.7e-193	84.13	Squalene synthase OS=Cucumis sativus OX=3659 GN=Csa_2G251460 PE=3 SV=1	[more]
A0A2R2WEW2	6.3e-193	84.62	Squalene synthase OS=Benincasa hispida var. chieh-qua OX=1208597 PE=2 SV=1	[more]
A0A1S3CD95	1.1e-192	84.13	Squalene synthase OS=Cucumis melo OX=3656 GN=LOC103499718 PE=3 SV=1	[more]

BLAST of Lsi10G004130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045628.1	1.1e-194	83.69	squalene synthase-like [Cucumis melo var. makuwa] >TYK02627.1 squalene synthase-...	[more]
XP_038902127.1	5.2e-194	84.86	squalene synthase 12-like [Benincasa hispida]	[more]
ARE29887.1	2.6e-193	84.38	squalene synthase [Cucumis sativus] >ARE29888.1 squalene synthase [Cucumis sativ...	[more]
XP_011649260.1	7.6e-193	84.13	squalene synthase 12 [Cucumis sativus] >XP_031737126.1 squalene synthase 12 [Cuc...	[more]
ARE29889.1	1.3e-192	84.62	squalene synthase [Benincasa hispida var. chieh-qua]	[more]

BLAST of Lsi10G004130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34640.1	4.8e-153	67.80	squalene synthase 1	[more]
AT4G34650.1	2.9e-142	62.95	squalene synthase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 85..261 e-value: 4.6E-27 score: 95.2
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 81..313 e-value: 7.1E-83 score: 280.6
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 34..80 e-value: 2.3E-16 score: 61.8
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 37..313
IPR006449	Squalene synthase-like	TIGRFAM	TIGR01559	TIGR01559	coord: 82..313 e-value: 1.6E-111 score: 370.7
None	No IPR available	PANTHER	PTHR11626:SF6	BNAA03G52950D PROTEIN	coord: 1..80
None	No IPR available	PANTHER	PTHR11626:SF6	BNAA03G52950D PROTEIN	coord: 82..355
IPR044844	Trans-isoprenyl diphosphate synthases, eukaryotic-type	PANTHER	PTHR11626	FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE	coord: 82..355 coord: 1..80
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 147..175
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 114..129
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 38..266 e-value: 1.27115E-72 score: 226.733

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004130.1	Lsi10G004130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0008610	lipid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004310	farnesyl-diphosphate farnesyltransferase activity
molecular_function	GO:0051996	squalene synthase activity
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups