Lsi10G003100 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAATAAATAGCGGGAGAGAGAAACCATTTGAAGCTGAGAGAAACCAAGAAGAAAAAAAAGGGGAAAACAAAAGAAAAAGAAAGAGAGCCTCCTCTTTCATCTTCTCCGAGAGGAAGCAAACAACACTCTACAATCTGAACCAGAGCCACCGCCATGGCCATGCCAAGGTGTTTCTTAGACATCACCATAGGCGGAGAGCTTGAAGGAAGAATCGTTATCGAGCTCTACAACGACGTCGTTCCTAAAACCGCCGAGAATTTCAGGGCGCTTTGCACCGGTGAGAAAGGCATTGCTCCTAACACCGGCGTTCCTCTCCATTTCAAGGTACTTACACATGTCTTTTTTTTCATTTTTATTTATTATTTTGGAAGTTGAACCGTATTTGTTTCTGAGATATGAAGCAAGGAGTTGTAGTTCTGATGATTTTGTTTCTTTGTGTTGCTTGATCAAAGTGTTTGTTTCCGCGACTTGAGGTGACTTTTGCTTTTCTCTTTAGTAGATAGTGATATCCTCGGTAAATGTTGGATGATTATTGCTTTTTTTCTGCTTTTGAGACTTTTCCGTTGTAGTGCGTTCCTAAACTGCGTTTTTCTGTTTACTCTCTTATAGGCTAAGGACTGAACCTTTTTTACTTTATGTTGTTTTATGGATTTGGATGTGGATTCCGTCGAACAATAAGTAAGTGGATAAAGAAAGGATAATTACGAAGTCGTATGGCATTAACTTTTTTCTGGCCTTCGGTTTTTAAATTTGTTTTGAGACTAATTTAGATACTATCTTTATCTCTGAGCTTGAAAGAAAGACATACTGTCTTTTCTGGCTGGGATGATGCTTTGCTTTCTTCTAGTTGTGAATTGATAGGAGATGAACATTTTCTTTTCTCTGTATTTCGTTCGTTTATACAGTGGAGAATGTATATAGAGAATGGAAACTGAAAGTGGCTGCTGTGGAACTTTGACATTACTATGGAGTGATTTGATATTTTCTGGGAAAATTTTGATTGCTAATGATATCTCCACACCTAGATGAGTTAAACTACCTTAAAGTTTCTTTGGAGTTATAGAGTATCTTCGTTCGATTTGGTTTCTATTGGTGAAAAGCACCCTCTACTTAACATTTCTAGTGACCTGCCAAGATGCAACTGTCTGAGAAAAGCCTTTCTCATCTCACTTGGCCAGTGTTTTAAAAGCATGATGTACACTAAATCATAATAGTCATGTGAGGCTTAAGCACAAGACTTAAAAAAAAGCAACGGAAAGCAATGGAAAAAAAAGTGCAAACATCATGTTAATGAGTGAATAATTCTTTTTAATGGGCTTTATTAAGGGTGCCTTGCTTGTTTGAAGTGATGCTCCTAGTGTGGGCTCGCCTAGGTGCGCTTCTCAAAACAGTTTGTAAGGCTAAGGACCAATCTAGTCATAGCATCACTTCAGGTGCAAGGTTAACTAACTAGGGCTTTTGTGGTTAGGTGTTTCTCATTCACGTGCACTTTATACTTCCTTGATTCTTTTGGTTGGTTGATAGAGTTGACCATGCTACCTTTTCCCAATCTCATAGAGATGTTTCTCCTTCTTTCTGTCTTTATACTTCTTAATATTTTTTCCATCGTCACATCAAACTAGTTGCAACGACTCTCATTTTTTACCTACCTTTTTTTTTTTTTTTTTTTTGAATTGTTAAGTAAGTCTCAATTTCATGCAATTTTGGGTGTGTTTCCTAAAATCTATGTTTTTAATAATCTTTTAAAAACGTTGTTCTACTGTTATTGTTCTTGAATATAATGAAAAGCTTTTCTTTTTGGTTATTTGTCTTCATTCTTTTGGTTACTTGTCTTCAATAAGGATTTAAGTTCATAAAAACTGAAGAGAAAAGTAGTAAACATCACTTTCTATTTTCCAAAAAGGTGGTACCAAAGAAATAAGTTTTGTATTGAAAAATTTTCCAGTTCTTTTTTGTCCAATTATTGCTTCCAAATACTTTTTTCTTTGTTTTGGCAGATAATTCACCTCTTAATTATCTGTTTTATGAACATCAAACAAATATTATAGCGTGTGTATGCAACATTGACATGCATTGTGAATCATGATAACATGAATTTGATACCTTCATTTCGATGGTACCTACATTAGGCCCCTGCAATTCTTCCACAAATTTTATTAATTTCTGAATTATGGTTTGTCTCAAAAGGTTTGGGTTGATATTCAAGTCTTATGCCTGTCTGTTACTATTTGATAAATATGTTTATGTGTTATCTATTCTCTTTTTGAATGCCTATGGTAGACAATTTGATTTCTTCTATTTATTTATACTTGGAAGAAGGTTTCTATGTTTCAAGAGATTATTGGAGATTCTCTTGTTGACACTTTCGTTGACTCTCTTGTTGATACTGTTACCATGGAAACTATATGAATGAAAATATATTTTCGTAAATATTATTGCGGTTTGCTAATGAGCTTGGCACATAGGTTTGTTACATATTCTAGAATGCACAACTTCATTTTCCTTCAATCATGATCATGTAGAGTTCTTTATCCAGTATTTGAAGTCACAATTGTTTAAACTTTTAGGGTGTCTGCTTTCATCGTGTAATCAAAGGATTTATGATTCAAGGTGGGGATATTTCTGCTGGCGATGGTACTGGGGGAGAATCTATTTATGGTTTGAAGTTTGAAGATGAAAATTTTGAACTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAACTCTGGTCCTAACACAAATGGGTCTCAGTTTTTCATAACAACAACTCGTACACCTCATTTGGATGGAAATCATGTGGTCTTTGGGAAGGTGGTGAAAGGAATGGGAGTAGTTCGTTCAATTGAACATGTTATAACTGGTGAGAATTATTATCCAACTCTTGATGTTGTAATTGCGGACTGTGGAGAAATCCCTGAAGGGTCGGATGATGGAGTATCAAATTTGTTCAAAGATGGTGACACCTATCCTGATTGGCCAGCTGATCTTGACCTGAGTCCGTTTGAACTTTCTTGGTGGATGAGCGCTGTGGATTCTATTAAGGCTTTTGGTAATGTACATTTTAAGGTAAAATCATTTTATAAAGGTTCTATAAGGACTTATTATGTCATTCTGGCACCTAGTGTCTTCTTTCCTCCTCCAAACACGAGAGAAATAATTTTTTATACTTTTTCGGTTATTGTCATCAATTTTTCACTTTTTTGTTGTTGTCTTGAAAATTCAACTTTATTTTTACTTCCATTTTTAATCATAAAATATTGAATAAAATTCATAGAAGCAAGATTACAAGATGGCTCTCAGAAAGTATAGGAAGGCTTTGCGATATCTTGACATTTGCTGGGAGAGAGAAGGGATTGATGAAGGTAAACTCTTAATTTACCTGCATTACTTGCATTTTCTTCAAAAATGAAAACTGCATCACTCGCATTTATGCGAACCGTATATTGGTTAGACATTGCTCAGATCTTTGATTTTTTATGTTCTTAACAGAGAAGAGTACATGTCTGAGGAAGACCAAATCACAGATATTCACAAACAGCTCTGTAAGATTTCATTAAGTACTTAGTGACGAATTTTATTTTGTATACAAATAAATGTTCCCTTATACAAAGACGATGCCATTTTTTAAGATCTCAAGGACGAAGGTTGGATATAAGCATACCATTTCTTATGGAAAGGATTATTCGAATTAATTATTTGTTAGACGCATTTCGTGCTGAGGAAATGATTTTCATTGTTATTAGTTCTAGTGAAGCAGCATGTTTAATAAAAAGAATATATTATATTGGAAGTTGAAGACAAAATAGAATATAACAGGGCATGAAATGTATCAATGGGGATAAAATTTCATTTAGTGAGAAGTAGATATTATACACTTAGATTATTATTTTTATATTCAACAATTATACAGGGTTGGGAGATTGAATCATCGACCTTTAGGATGATAATTGATATGATACTTTATTTAATAAACTATGTTTGAATTGACAATAGGTTTTTTATTTAGTATGTTTCATCGATAATCTTTTTTCTTTTTAAGAGTTAATGAGAGAAGAACCTTAATTATACATATGCACGTGAAAGAAAAGTAAAATTTGTTTAATTCACTAAGGTGCAAGAGGTGTAACAAAAAGGTGACCAAAGATTGCCTTGGGTGCTCATCGTGGCCGTGTGTTTAGTGCAACTGGCATGTTTCAAATGCTCCATTTTTTAGTGTAGTCATGTTATCCTTTCATCTATTGTAGGCTTGTAAACTGAAGTTAGGGGATCTAAAGGGAGCATTGTTGGACACTGAATTTGCAATTCGTGAAGGGGATAACAATGTAAAAGCCATGTTCCGCCAAGGCCAGGTTGGTATCTTCCATTGATGAATCATTGAATATCTAAATGTTTTTCCTTGCAACGATTATTGCTTCTTGGATGAAATGTCTCTACTGGTGATATATATTTTTAATTATCTCTTCGTTCTTTACAATTTAATGGCATAGTTTTACAACCTATAGAACCGATCTAGTTTAAGAAAGGTCATAATTACTTCTACGTTTGCGTTTGTTTGACTAAACCTGTCACCTATCAGGCACACATGGCTCTTAATGACATTGACTCTGCAGTTGAAAGCTTTAAAAAGGCATTGGATTTGGAGCCAAATGATGGTGAGTTATGATTTTACTTCAGTTGGCTCATTTGGTTGCCTGAGTCTCAACATTATTTTCCACACCATAGACTACCGATTTATATATAAGTATTTATGAATATTATAATATGGACATGAACATGCACCACAGCACCAGATTCTGTTTATGAATGTATGAGAATTTGATTTCTTTTTTATTTTTTCGAAATTTTATCAGCTGGAATAAAGAAAGAGCTGGCTGCTGCTAAGAAAAAGGTTAGTTGACAGTGATCTTCTATATTATGATTGCAAGAATAAAATGATCATGTAATTAAGGACTAATTTTTTAAACAGGTTGCTGATAGACGTGATCTAGAGAGGAAAGCATATGGCAAGATGTTCCTATAGGACTTTGCTCTCCAATGGTAGAGTTGCAACTCTTTTATAATCTTGTTGAACAAAAAAAAAATAAAAAAGAATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACACAAAAAATAGCAAAAGTTTTAGATAGTTGTGATAGACGTTGATAGAATTCTATCAGTAGATACTGATAGAAGTCTATCAATGTCTATCAGTGTTTTTTTTGCTATTTTCTGTAAATAGTTTAACATTTTTTCAATCTGTCTTTTTGAAATCTGTTTTGCAGTTTTTGCTATTTCTCCGTTTATGTTATCATGATATGATACTTCAAATTTTAGGTTTTGTTTTGGAGCCAGATGTGAAGAGAAATAGATATCCAGTTTCTAATGGCTAGTTCAATTATCCAAAACTGCAATTGGAGGGTGAGGATCGAACCATCAATTTTTGAGATGGTAATTGATATCTTATCTATTGAGCTATGTTTGGATTAGCTACAAAATTGCAGTTTGTATGGTTGTCTGTTCAATGAAAATATATAGACAAACAAGTAGCTTTTGTGATTTTGATATGGTCACTATTTAATTTTTGTTTAAACGGTTGTAATGTTTTGTTGGTGTAATCTTGAACTTAGGATTTGAATTAAATGGCAGGTTAAACTACAAGTTTAGATGTTTGTGTTGGATAAGTACTTAGAACTTTTAAATTCTTTTTAAAATTTCTTCTAACTTTTAATTTTGTGAATTTTTAAAAATATCGAAGAGTTAAATGATCTATTAGACATGAAATTCAAAGTTTTAGAATTAATTATTTATAGAATTGAAAGTTTAGAAACTTATTGATACTGAGTAAATATTTTTTGAAGTTTAGGAATTTATTTAACACAAACTTGAAAGTTTAAGGACTAGATTTGCAATATAATTTAAACTAAATGATCTTTTATATACAATACATATGTTGATATCGAAATTTGGTATTAGCCGGGAATTTGTAATCTTTGGGAGGAATCGAACGAACACCCTAGAGGAGAATTTCACGTCGGTGTGGTGTTTGGCCACCAACACTTTGATGATAAAGTCTCTATTTGTTTAGAGAGTATAAAGTTTGGGATGTATTTCAATGTACCTCAAATGTCACAAGCCCTCTCTCGATTATTTAAAAATAGGTTTCGTAACAGTCATTCGCTCATTAAACTTATCTGGTTATTAATTGAACAGTTGCCATTCGTTATGAATTGTTGGATTTATTTCACTAGTGACTCAAGCATATGCAAAAGTAAAATATTTAGGCATATCTTCACCTTTACAGGGTCGACCTCCTCAAGCTCTATGGTTGTCCCTATGGGGCAGTCTCCATGATCTGGTATTATTTTCCTCTCATGGTCGACCCTATGAGTCGGCCTTTATGAAGTCTTCGACCTTCTAGCCATATTTTTAT TGGAAATAAATAGCGGGAGAGAGAAACCATTTGAAGCTGAGAGAAACCAAGAAGAAAAAAAAGGGGAAAACAAAAGAAAAAGAAAGAGAGCCTCCTCTTTCATCTTCTCCGAGAGGAAGCAAACAACACTCTACAATCTGAACCAGAGCCACCGCCATGGCCATGCCAAGGTGTTTCTTAGACATCACCATAGGCGGAGAGCTTGAAGGAAGAATCGTTATCGAGCTCTACAACGACGTCGTTCCTAAAACCGCCGAGAATTTCAGGGCGCTTTGCACCGGTGAGAAAGGCATTGCTCCTAACACCGGCGTTCCTCTCCATTTCAAGGGTGTCTGCTTTCATCGTGTAATCAAAGGATTTATGATTCAAGGTGGGGATATTTCTGCTGGCGATGGTACTGGGGGAGAATCTATTTATGGTTTGAAGTTTGAAGATGAAAATTTTGAACTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAACTCTGGTCCTAACACAAATGGGTCTCAGTTTTTCATAACAACAACTCGTACACCTCATTTGGATGGAAATCATGTGGTCTTTGGGAAGGTGGTGAAAGGAATGGGAGTAGTTCGTTCAATTGAACATGTTATAACTGGTGAGAATTATTATCCAACTCTTGATGTTGTAATTGCGGACTGTGGAGAAATCCCTGAAGGGTCGGATGATGGAGTATCAAATTTGTTCAAAGATGGTGACACCTATCCTGATTGGCCAGCTGATCTTGACCTGAGTCCGTTTGAACTTTCTTGGTGGATGAGCGCTGTGGATTCTATTAAGGCTTTTGGTAATGTACATTTTAAGGTAAAATCATTTTATAAAGGTTCTATAAGGACTTATTATGTCATTCTGGCACCTAGTGTCTTCTTTCCTCCTCCAAACACGAGAGAAATAATTTTTTATACTTTTTCGAAGCAAGATTACAAGATGGCTCTCAGAAAGTATAGGAAGGCTTTGCGATATCTTGACATTTGCTGGGAGAGAGAAGGGATTGATGAAGAGAAGAGTACATGTCTGAGGAAGACCAAATCACAGATATTCACAAACAGCTCTGCTTGTAAACTGAAGTTAGGGGATCTAAAGGGAGCATTGTTGGACACTGAATTTGCAATTCGTGAAGGGGATAACAATGTAAAAGCCATGTTCCGCCAAGGCCAGGTTGTTGAAAGCTTTAAAAAGGCATTGGATTTGGAGCCAAATGATGGTGATATTTATGAATATTATAATATGGACATGAACATGCACCACAGCACCAGATTCTCTGGAATAAAGAAAGAGCTGGCTGCTGCTAAGAAAAAGGTTGCTGATAGACGTGATCTAGAGAGGAAAGCATATGGCAAGATGTTCCTATAGGACTTTGCTCTCCAATGGTTTTGTTTTGGAGCCAGATGTGAAGAGAAATAGATATCCAGTTTCTAATGGCTAGTTCAATTATCCAAAACTGCAATTGGAGGGTGAGGATCGAACCATCAATTTTTGAGATGGGTCGACCTCCTCAAGCTCTATGGTTGTCCCTATGGGGCAGTCTCCATGATCTGGTATTATTTTCCTCTCATGGTCGACCCTATGAGTCGGCCTTTATGAAGTCTTCGACCTTCTAGCCATATTTTTAT ATGGCCATGCCAAGGTGTTTCTTAGACATCACCATAGGCGGAGAGCTTGAAGGAAGAATCGTTATCGAGCTCTACAACGACGTCGTTCCTAAAACCGCCGAGAATTTCAGGGCGCTTTGCACCGGTGAGAAAGGCATTGCTCCTAACACCGGCGTTCCTCTCCATTTCAAGGGTGTCTGCTTTCATCGTGTAATCAAAGGATTTATGATTCAAGGTGGGGATATTTCTGCTGGCGATGGTACTGGGGGAGAATCTATTTATGGTTTGAAGTTTGAAGATGAAAATTTTGAACTGAAACATGAAAGGAAAGGAATGTTGTCTATGGCTAACTCTGGTCCTAACACAAATGGGTCTCAGTTTTTCATAACAACAACTCGTACACCTCATTTGGATGGAAATCATGTGGTCTTTGGGAAGGTGGTGAAAGGAATGGGAGTAGTTCGTTCAATTGAACATGTTATAACTGGTGAGAATTATTATCCAACTCTTGATGTTGTAATTGCGGACTGTGGAGAAATCCCTGAAGGGTCGGATGATGGAGTATCAAATTTGTTCAAAGATGGTGACACCTATCCTGATTGGCCAGCTGATCTTGACCTGAGTCCGTTTGAACTTTCTTGGTGGATGAGCGCTGTGGATTCTATTAAGGCTTTTGGTAATGTACATTTTAAGGTAAAATCATTTTATAAAGGTTCTATAAGGACTTATTATGTCATTCTGGCACCTAGTGTCTTCTTTCCTCCTCCAAACACGAGAGAAATAATTTTTTATACTTTTTCGAAGCAAGATTACAAGATGGCTCTCAGAAAGTATAGGAAGGCTTTGCGATATCTTGACATTTGCTGGGAGAGAGAAGGGATTGATGAAGAGAAGAGTACATGTCTGAGGAAGACCAAATCACAGATATTCACAAACAGCTCTGCTTGTAAACTGAAGTTAGGGGATCTAAAGGGAGCATTGTTGGACACTGAATTTGCAATTCGTGAAGGGGATAACAATGTAAAAGCCATGTTCCGCCAAGGCCAGGTTGTTGAAAGCTTTAAAAAGGCATTGGATTTGGAGCCAAATGATGGTGATATTTATGAATATTATAATATGGACATGAACATGCACCACAGCACCAGATTCTCTGGAATAAAGAAAGAGCTGGCTGCTGCTAAGAAAAAGGTTGCTGATAGACGTGATCTAGAGAGGAAAGCATATGGCAAGATGTTCCTATAG MAMPRCFLDITIGGELEGRIVIELYNDVVPKTAENFRALCTGEKGIAPNTGVPLHFKGVCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGNHVVFGKVVKGMGVVRSIEHVITGENYYPTLDVVIADCGEIPEGSDDGVSNLFKDGDTYPDWPADLDLSPFELSWWMSAVDSIKAFGNVHFKVKSFYKGSIRTYYVILAPSVFFPPPNTREIIFYTFSKQDYKMALRKYRKALRYLDICWEREGIDEEKSTCLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAIREGDNNVKAMFRQGQVVESFKKALDLEPNDGDIYEYYNMDMNMHHSTRFSGIKKELAAAKKKVADRRDLERKAYGKMFL Homology
BLAST of Lsi10G003100 vs. ExPASy Swiss-Prot
Match: Q9C566 (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana OX=3702 GN=CYP40 PE=2 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 1.0e-152 Identity = 278/416 (66.83%), Postives = 303/416 (72.84%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy Swiss-Prot
Match: P26882 (Peptidyl-prolyl cis-trans isomerase D OS=Bos taurus OX=9913 GN=PPID PE=1 SV=6) HSP 1 Score: 315.5 bits (807), Expect = 9.0e-85 Identity = 178/413 (43.10%), Postives = 234/413 (56.66%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy Swiss-Prot
Match: Q6DGG0 (Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3) HSP 1 Score: 313.5 bits (802), Expect = 3.4e-84 Identity = 177/413 (42.86%), Postives = 234/413 (56.66%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy Swiss-Prot
Match: Q9CR16 (Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3) HSP 1 Score: 312.0 bits (798), Expect = 9.9e-84 Identity = 176/413 (42.62%), Postives = 234/413 (56.66%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy Swiss-Prot
Match: Q08752 (Peptidyl-prolyl cis-trans isomerase D OS=Homo sapiens OX=9606 GN=PPID PE=1 SV=3) HSP 1 Score: 308.1 bits (788), Expect = 1.4e-82 Identity = 176/413 (42.62%), Postives = 231/413 (55.93%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy TrEMBL
Match: A0A5A7SS00 (Peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00530 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.8e-181 Identity = 331/416 (79.57%), Postives = 339/416 (81.49%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy TrEMBL
Match: A0A0A0LII7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G234600 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.8e-181 Identity = 330/416 (79.33%), Postives = 340/416 (81.73%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy TrEMBL
Match: A0A1S3C960 (peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498406 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.8e-181 Identity = 331/416 (79.57%), Postives = 339/416 (81.49%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy TrEMBL
Match: A0A6J1FY18 (peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucurbita moschata OX=3662 GN=LOC111448877 PE=4 SV=1) HSP 1 Score: 644.0 bits (1660), Expect = 4.1e-181 Identity = 329/415 (79.28%), Postives = 340/415 (81.93%), Query Frame = 0
BLAST of Lsi10G003100 vs. ExPASy TrEMBL
Match: A0A6J1J7W3 (peptidyl-prolyl cis-trans isomerase CYP40-like OS=Cucurbita maxima OX=3661 GN=LOC111484260 PE=4 SV=1) HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180 Identity = 327/415 (78.80%), Postives = 339/415 (81.69%), Query Frame = 0
BLAST of Lsi10G003100 vs. NCBI nr
Match: XP_038900739.1 (peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1 [Benincasa hispida]) HSP 1 Score: 654.8 bits (1688), Expect = 4.8e-184 Identity = 336/416 (80.77%), Postives = 342/416 (82.21%), Query Frame = 0
BLAST of Lsi10G003100 vs. NCBI nr
Match: XP_008459216.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Cucumis melo] >KAA0032049.1 peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Cucumis melo var. makuwa] >TYK13572.1 peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 645.2 bits (1663), Expect = 3.8e-181 Identity = 331/416 (79.57%), Postives = 339/416 (81.49%), Query Frame = 0
BLAST of Lsi10G003100 vs. NCBI nr
Match: XP_011649200.1 (peptidyl-prolyl cis-trans isomerase CYP40 [Cucumis sativus] >XP_031736362.1 peptidyl-prolyl cis-trans isomerase CYP40 [Cucumis sativus] >KGN61735.1 hypothetical protein Csa_006110 [Cucumis sativus]) HSP 1 Score: 645.2 bits (1663), Expect = 3.8e-181 Identity = 330/416 (79.33%), Postives = 340/416 (81.73%), Query Frame = 0
BLAST of Lsi10G003100 vs. NCBI nr
Match: XP_022944422.1 (peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita moschata] >XP_022944423.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita moschata] >XP_023512936.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita pepo subsp. pepo] >KAG6571152.1 Peptidyl-prolyl cis-trans isomerase CYP40, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010962.1 Peptidyl-prolyl cis-trans isomerase CYP40 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 644.0 bits (1660), Expect = 8.4e-181 Identity = 329/415 (79.28%), Postives = 340/415 (81.93%), Query Frame = 0
BLAST of Lsi10G003100 vs. NCBI nr
Match: XP_022986556.1 (peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita maxima] >XP_022986557.1 peptidyl-prolyl cis-trans isomerase CYP40-like [Cucurbita maxima]) HSP 1 Score: 642.1 bits (1655), Expect = 3.2e-180 Identity = 327/415 (78.80%), Postives = 339/415 (81.69%), Query Frame = 0
BLAST of Lsi10G003100 vs. TAIR 10
Match: AT2G15790.1 (peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase ) HSP 1 Score: 541.2 bits (1393), Expect = 7.2e-154 Identity = 278/416 (66.83%), Postives = 303/416 (72.84%), Query Frame = 0
BLAST of Lsi10G003100 vs. TAIR 10
Match: AT3G63400.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 236.1 bits (601), Expect = 4.9e-62 Identity = 116/169 (68.64%), Postives = 130/169 (76.92%), Query Frame = 0
BLAST of Lsi10G003100 vs. TAIR 10
Match: AT3G63400.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 236.1 bits (601), Expect = 4.9e-62 Identity = 116/169 (68.64%), Postives = 130/169 (76.92%), Query Frame = 0
BLAST of Lsi10G003100 vs. TAIR 10
Match: AT3G63400.3 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 236.1 bits (601), Expect = 4.9e-62 Identity = 116/169 (68.64%), Postives = 130/169 (76.92%), Query Frame = 0
BLAST of Lsi10G003100 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 ) HSP 1 Score: 228.0 bits (580), Expect = 1.3e-59 Identity = 112/173 (64.74%), Postives = 133/173 (76.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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