Lsi10G003000 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAATAGACGATAGAGCCTTCTCTGTCGCCTCTGCCGCGTCTCCAAATTATCACCGCCACTTGGTCTCCTTCGCCGCCGAGGCCAACATTGTCGCTATCTCCGTTGAATACCAACTTGCGCGGGAGAATTCTCTCTCGACGACATACGACGACGCGTGGGCGGTGGTGGAAGGGGCAGCCTCGCACTGCAATCGCGACGACGCTAAGATTTGGCTGAACGAACACACGAACTTTGACCATGTATTCATCGTTCAGGGATAA ATGCTAATAGACGATAGAGCCTTCTCTGTCGCCTCTGCCGCGTCTCCAAATTATCACCGCCACTTGGTCTCCTTCGCCGCCGAGGCCAACATTGTCGCTATCTCCGTTGAATACCAACTTGCGCGGGAGAATTCTCTCTCGACGACATACGACGACGCGTGGGCGGTGGTGGAAGGGGCAGCCTCGCACTGCAATCGCGACGACGCTAAGATTTGGCTGAACGAACACACGAACTTTGACCATGTATTCATCGTTCAGGGATAA ATGCTAATAGACGATAGAGCCTTCTCTGTCGCCTCTGCCGCGTCTCCAAATTATCACCGCCACTTGGTCTCCTTCGCCGCCGAGGCCAACATTGTCGCTATCTCCGTTGAATACCAACTTGCGCGGGAGAATTCTCTCTCGACGACATACGACGACGCGTGGGCGGTGGTGGAAGGGGCAGCCTCGCACTGCAATCGCGACGACGCTAAGATTTGGCTGAACGAACACACGAACTTTGACCATGTATTCATCGTTCAGGGATAA MLIDDRAFSVASAASPNYHRHLVSFAAEANIVAISVEYQLARENSLSTTYDDAWAVVEGAASHCNRDDAKIWLNEHTNFDHVFIVQG Homology
BLAST of Lsi10G003000 vs. ExPASy Swiss-Prot
Match: A0A0H5BMX5 (Tuliposide B-converting enzyme 1, amyloplastic OS=Tulipa gesneriana OX=13306 GN=TCEB1 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.1e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy Swiss-Prot
Match: Q9SMM9 (Probable carboxylesterase 13 OS=Arabidopsis thaliana OX=3702 GN=CXE13 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.5e-10 Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy Swiss-Prot
Match: Q9FX92 (Probable carboxylesterase 3 OS=Arabidopsis thaliana OX=3702 GN=CXE3 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 5.9e-10 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy Swiss-Prot
Match: Q5NUF3 (2-hydroxyisoflavanone dehydratase OS=Glycine max OX=3847 GN=HIDH PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.2e-08 Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy Swiss-Prot
Match: Q9SX78 (Probable carboxylesterase 2 OS=Arabidopsis thaliana OX=3702 GN=CXE2 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.5e-08 Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy TrEMBL
Match: A0A6J1G929 (probable carboxylesterase 2 OS=Cucurbita moschata OX=3662 GN=LOC111451823 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.9e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy TrEMBL
Match: A0A6J1L361 (probable carboxylesterase 2 OS=Cucurbita maxima OX=3661 GN=LOC111499978 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.0e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy TrEMBL
Match: A0A6J1D5P6 (probable carboxylesterase 2 OS=Momordica charantia OX=3673 GN=LOC111017169 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19 Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy TrEMBL
Match: A0A7J7HGG9 (Abhydrolase_3 domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_009659 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Lsi10G003000 vs. ExPASy TrEMBL
Match: A0A4S4EGB9 (Abhydrolase_3 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_010423 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Lsi10G003000 vs. NCBI nr
Match: XP_023532126.1 (probable carboxylesterase 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20 Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. NCBI nr
Match: XP_022948164.1 (probable carboxylesterase 2 [Cucurbita moschata]) HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. NCBI nr
Match: KAG7035128.1 (putative carboxylesterase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. NCBI nr
Match: KAG6605131.1 (putative carboxylesterase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Lsi10G003000 vs. NCBI nr
Match: XP_038900484.1 (probable carboxylesterase 2 [Benincasa hispida] >XP_038900485.1 probable carboxylesterase 2 [Benincasa hispida] >XP_038900486.1 probable carboxylesterase 2 [Benincasa hispida] >XP_038900487.1 probable carboxylesterase 2 [Benincasa hispida] >XP_038900488.1 probable carboxylesterase 2 [Benincasa hispida] >XP_038900490.1 probable carboxylesterase 2 [Benincasa hispida]) HSP 1 Score: 106.7 bits (265), Expect = 1.0e-19 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0
BLAST of Lsi10G003000 vs. TAIR 10
Match: AT3G48700.1 (carboxyesterase 13 ) HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11 Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Lsi10G003000 vs. TAIR 10
Match: AT1G49640.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of Lsi10G003000 vs. TAIR 10
Match: AT1G47480.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 3.9e-09 Identity = 26/79 (32.91%), Postives = 48/79 (60.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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