Lsi10G002250 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G002250
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr10: 3664194 .. 3670022 (+)
RNA-Seq ExpressionLsi10G002250
SyntenyLsi10G002250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTGTCCTCGCTTATCCGGTAAGCTCTACCAGATGTCTCAGAACGAGCAACAAATTTCGCGGTAAGTTTCTTAGAAATCATGTTATGGAGTCCCTCAAGACTTCATTCCTCAGGCCAATCCTCCTCCCTTCCCCTTCCAATCGCAGCACCCGCTGCCCGTTAAAGTCCAGAAACGTCCAAATTTTTATCGTCCGCTCATCAGTAACGCCCGATCCTTGGTCTCTCAGCGATGGCAATCCCGCAAGACCAAAACCCAGGTCCAAAAACGCCAAAAAGCCGCTCTCCGACGACAACGCCCGCCGAATCATCAGGGCCAAGGCTCAGTACCTCAGTGTACTGCGTCGAAATCAGGGCCCCAGAGCTCAAACGCCCAAATGGATCAAGAGAACTCCGGAGCAGATGGTGCAGTACCTTGAGGACGATAGAAATGGCCACCTCTATGGAAAGCATGTGGTGGCGGCGATTAGGCACGTGCGGAGTTTATCTCAGAAAATCGAGGGAGAGTACGATATGAGGATGGAGATGGCTTCTTTTGTTGGAAAATTGACCTTTAGGGAGATGTGTATTGTGCTTAAGGAGCAGAAGGGGTGGAGGCAGGTCAGAGATGTATTTGATTGGATGAAATTGCAGGTGGGTTTTATGGAATTATATCTTTTTGATTGATTTTCGTTTGGAATGTTGCTGTTTTCATAGAATTTCTTGATATTGTTGGTGGGGTTTTGTTTTCCATAGCATGAAACGTCTTGTTTTTTTTCCTAGATTCAGCTAGCATAAGAGTAATTAAACTTGATTATATTTTACTTGATACTGTGTTTCATACATGATGATCGACAAACTGATCTTCAGGCAACTTGAACTGATAGCTTTTCGTTGGATATTTAATTAAAACCAAATCCTGTTGGGTCCCTTGTAGTTTTCTGTTGGAATGTTGATTATACATAATAGTTTTGATATGAAGCATTCAATTGACCATGTTGTAATAGTAGGCTTCTGTTTGGACAGTTGAGTTATCGCCCAAGTGTCATTGTCTACACAATTGTTTTGCGCACATATGGGCAAGTTGGAAAAATAAAGCTGGCTGAAGAAACTTTCTTGGAGATGCTTGAAGTTGGATTAGAACCAGATGAAGTTGCTTGTGGAACGATGTTATGTACATATGCCAGATGGGGACATCATAAGGCTATGTTGTCTTTCTATTCTGCTGTTAAGGATAGGGGAATTATACCTTCTATGGCCGTTTTCAATTTTATGCTGTCCTCTTTGCAGAAGAAGGGACTCCATGCTAAGGTCAAAGAATTATGGATGCAGATGGTAGAGATAGGAGTGACATTCAATGATTTTACCTATACAGTAGTTATCAACTCACTTGTTAAGGAAGGCCATAGTGAGGAGGCTTTCAAAGTTTTCAATGAGATGAAGAACTGTGGGTTTGTTCCTGAAGAGGTGACTTATAACCTACTTATTAGTTTAAGCATAAAAAGAGGGAACTCAGATGAAGTTTTGAGACTCTACAAGGACATGAGAGATAAGGATATTGTTCCAAGTAACTATACTTGTTCTTCACTTCTGACGTTGTTTTACAAGAATGGAGATTATTCTAAAGCCCTCTCTCTGTTTTCAGAGATGGAAAGCAAAAAAGTTGTGGTTGATGAAGTTATATATGGATTACTTATTAGAATATATGGAAAACTGGGTCTATATGAGGATGCCCATAAAACATTTGAAGAAATGGAGCAGCTAGGTTTACTTACAGATGAGAAAAGCTATTTGGCAATGGCTCAAGTCCATCTCAGTTCAAGGAACTTTGAGAAAGCTTTAAACATAATTGAGTTGATGAAATCTAGAAACATTTGGTTGTCAAGATTTGCTTATATAGTATCATTGCAATGTTATGTTATGAAAGAAGATATAAGGTCTGCAGAATCCACATTTCAAGCTTTATCCAAAACTGGACTTCCTGATGCTCGTTCTTGTATTAATATTCTCAATTTGTATTTAAAACTAAACTTGGTGAACAAGGCTAAAGATTTTATAGCCCATATAAGAAAGGATGGGGTAGTTTTTGATGAGGAACTTTATAAATTGGTTATGAGAGTCTATTGCAAGGAGGGGATGTCAAAAGATGCTGAGATTTTAATTAAACTTATGAAGAAGGATGAATTATTTGTTGATAATAAATTTGTGGAGACATTTTCATTTATGTTTAAACTTGATGGAGGTGAGATAAATGAAAACACAATTGTCGGCTATGACCAACCTGATCATATGGCTCTTGATATGATACTTCGGCTGTATTTGGCAAATGGTGATGTTGGTAAAAGGAGTAAGATCCTGAAATTAATACTTGGGAAAGGAGGCGTGACCATTGCGAGTCAACTTGTAGCTAATTTGATTAGAGAAGGCAAGAAAATGACTCGTTTCTTTTGTACATTGGCGTCCGCACCCACACACACATATTTTGAAGTATGATAATATCTTTTTATGGATTTATATATGTATGCTTTCAGATTAAGGCAAGCTCGCTTAATTTCTTTACTCTACAGGTGATGCATTGAAAGCAGGAACTCTTACAAAAGAATTACTCAAGCTTGACTGCCGACTAGATGATGCTACTATAGCTTCCTTAATCAGTTTGTATGGGAAAGAGAAGAAAATAAATCAAGCAGCAGAAATTTTGGCAGCAGTTGCAGATTCTTGCACATCAAAATTGATTTTTGGTTCCATGATTGATGCCTATATCAAATGTGATAAAGCTGAAGAAGCATTCACACTTTACAAAGAACTAGTTGAAAAAGGATATGATCTTGGTGCTGTTGCTGTCAGCAGAATAGTGAATACTTTGACTGTTGGTGGTATGTTGTGGAGTCATATACGTGATCAGCATACTGGTTTTCTGCTTTTCTTTACTCTTGTTTGATTAGTCTTCTTTTGCTGTTGCAGCCCAAACCATTTTCTTAAATACTTTAAAAAGCTAAAAAGAAAAAAGTAATGACTCGTTGTGGAAACTACAGAGACATTAATCTGTGCTAATTTAGGCTTCGGCTTTAAATATTTCCATAGAAAGTTTTAGACACATCTTTCTTTCCCCACTTAGACAGAAGCTATCCTAATTTGAGAACAAATTTTCAGTAGAGCACACTTTGTGCTGACATAGTATCTAGTATATCTATAGAGTTCTTATTTATTTATTTATTATTATTTTTTAACATAACCTGTCATTGATGGAATGAAAAAACTACATATCTATAAAGTCAATGATTAGGTCGAAGTGTCCCGTTGAACTCTTAGTAAATTTTGTAGCTTATAACTATCAGAGGCTAGAGCTGAGTGCTCTGCTTAATGCTGATTGACTTGGTGGAACGGATCCCCCGAGCCAACCCATCCCTTCAAGTGGTCATTAAATTGTGACAGAGTTTTCGCATAATCTAACCAATTAACATTATGGTCTATCTGTTATAGCATTTTAGACTTTCTTTTGCATTTGCTTCTACTATTGAGGTAGTATTATATATTGGCTTATTTACAGGAAAACATCAAGTGGCAGAGAATGTGATACGTGCTAGTCTTAATTGTGGCTTGGAGCTTGATACAGTGGCATTCAATACATTTATCAAGGCAATGCTGGAGGCAGGTTGGTTAACCTCAAACATATTAATAAATTATGTGTGATGAATACTTTTTGAAAAACATTCACTATGATTATAACATGTTATAATTTGCAGGGAAATTGCATTTTGCATCCAGAATATATGAGCATATGATTGCTCTTGACATTGTACCATCAATTCAGACATATAACACCATGATTAGGTATGAGTTGAAATGACTCCAGATTCATTGAAACTGATTGCTAAAGAGCTATTGAGGCTTCCACACCCATTAGGACAAGATATTGATGTTGATATTGGCTTTTTGTGGATTCAGTGTCTATGGACGTGGTCGGAAGCTCGATAAGGCTGTGGCAATGTTTAATGCAGCTCGCAGCTCAGGCCTCTCTCCCGATGAAAAGGCATATACAAACCTGATTAGCTGCTATGGGAAGGCTGGTATTATTCTTCTCCAGATTCAATCGAATAACCCTGTAGATAAATTACATATCAATTTTCATTCAACTTAATTGTACTATGGCTTATGATCCTTTTTGGTCTTCCTTGGTATTCTTCTAAGGAGTCTGTCAATAATGTAAAATATTTATCAAATGCAATGAAATTGTTACGAATTAATAATTAACTGTTGTACCTTGTAGGTAAGACGCATGAAGCAAGCTTGCTGTTCAAAGAAATGCTGGAAGAAGGGGTTAAACCTGGGATGGTACTCTCATAAGTCATAATTTCCCTTGGATTTGTATGGTGTTGATCATCTGTATAAATGAATAAATATACCATAGCCTATCTGTTTAAACTTTTGGGTCTAGTGGTGATTTAACAAATAATAGAAACCTTAGCTCCGTTAGTAGAACTAGAATAAGGGATGCACATGGGTAGGGTCGGGTTAGGGGTTAGAATTGTTCTACTGCACCTTGCAATTGTAGAGTGACTGATCTTCGCTTTGGTATCTTAGTATTTTCTGTGAATTGGTGTACAAATCTGGTGCTGACTCTTTAATAAAAAAATGCAGGTCAGCTACAATATTATGGTCAATGTATATGCTAATGCCGGACTTCATGAAGAAACAGAGAAGCTTTTCAAAGCAATGGAGCAAGATGGTTTCTTACCCGATTCTTTTACCTACTTCTCGCTCATTCGAGCTTACACACAGAGTTGCAATTATTCCGAAGCAAAGAAAATCATTAACTCTATGCAGGAAAATGGCATCCCCGCGTCTTGTGCACATTACGACCTGTTGCTCTCAGCTTTGGCAAAGGCAGGAATGATAAGGAAAGCAGAAAGAGTCTATGACAAACTTCAAACAGCTGGTCTAAATCCCGACGTTACATGCAATCGGAACCTGATGAGAGGTTACCTAGACTATGGATATGTCAAAGAAGGCATCAAGTTCTTTGAATCTACATGCAAATATGCAGGAGACAGGTTTATAATGAGTGCAGCTGTGCATTTTTATAAGGTTGAAAGAAAGGAGGATGAAGCATTGAATATTTTGGATTCCATGAAAATTTTGGGTATTTCATTCTTGAAAGACCTTCGAGTCGGATCGAAGCTAGAGTCTGCTTGAGCCTTAGCATACTCGGTGATCCGATTTGCAGATTGTCATTTGACTGAGAAGCAAAGGGAATTGAGAAGATGCACATATTGGAGGACGTACTGGATATATGAATATTATACATGGCGCTCTAATATATGGCTCTTGGACCAATGTGTTCGTCAAACACCTTGGAATGATAGCAGAAACGTCCTGGGTTACTTAAGGAAGTTGAGGATGATAAATGGGATCGAAAGATTTTATCAACTAATCTGACTGCTGTTGTGATCTCTCTTTCCGGTCTTGCTGAGATGGGGTTATGACACAGTATCAAGGAATTTTATTGTCCTGGATTGCTTAATTTTGTTATTTACGCCATACCGATATGACAACCGAGGCTGAAAAGTAATGTTGATTGGATGAAGATGGCATCTTCTTATCGATTTAGAAACTGTTCTGAAGAAGTTGCATGAGCTTGTGAACAGAATATTTATTGTGCTGGAAGTTATCAAGGGTAATGGGAAATATATTAGCAATTTAGAGTGTAATCCTCATGTTGCTTGTTGATCTAGTTTGTATCATATTTTCATGTATCTTTTAAGTTTGTTTCTAAACTAACGCCACGTTTATCAAATTGTAATGAAAATTGGTGTAATCGTAATAGAATTTCATTGATAGATCAATCGTAA

mRNA sequence

TACTGTCCTCGCTTATCCGGTAAGCTCTACCAGATGTCTCAGAACGAGCAACAAATTTCGCGAAATCATGTTATGGAGTCCCTCAAGACTTCATTCCTCAGGCCAATCCTCCTCCCTTCCCCTTCCAATCGCAGCACCCGCTGCCCGTTAAAGTCCAGAAACGTCCAAATTTTTATCGTCCGCTCATCAGTAACGCCCGATCCTTGGTCTCTCAGCGATGGCAATCCCGCAAGACCAAAACCCAGGTCCAAAAACGCCAAAAAGCCGCTCTCCGACGACAACGCCCGCCGAATCATCAGGGCCAAGGCTCAGTACCTCAGTGTACTGCGTCGAAATCAGGGCCCCAGAGCTCAAACGCCCAAATGGATCAAGAGAACTCCGGAGCAGATGGTGCAGTACCTTGAGGACGATAGAAATGGCCACCTCTATGGAAAGCATGTGGTGGCGGCGATTAGGCACGTGCGGAGTTTATCTCAGAAAATCGAGGGAGAGTACGATATGAGGATGGAGATGGCTTCTTTTGTTGGAAAATTGACCTTTAGGGAGATGTGTATTGTGCTTAAGGAGCAGAAGGGGTGGAGGCAGGTCAGAGATGTATTTGATTGGATGAAATTGCAGTTGAGTTATCGCCCAAGTGTCATTGTCTACACAATTGTTTTGCGCACATATGGGCAAGTTGGAAAAATAAAGCTGGCTGAAGAAACTTTCTTGGAGATGCTTGAAGTTGGATTAGAACCAGATGAAGTTGCTTGTGGAACGATGTTATGTACATATGCCAGATGGGGACATCATAAGGCTATGTTGTCTTTCTATTCTGCTGTTAAGGATAGGGGAATTATACCTTCTATGGCCGTTTTCAATTTTATGCTGTCCTCTTTGCAGAAGAAGGGACTCCATGCTAAGGTCAAAGAATTATGGATGCAGATGGTAGAGATAGGAGTGACATTCAATGATTTTACCTATACAGTAGTTATCAACTCACTTGTTAAGGAAGGCCATAGTGAGGAGGCTTTCAAAGTTTTCAATGAGATGAAGAACTGTGGGTTTGTTCCTGAAGAGGTGACTTATAACCTACTTATTAGTTTAAGCATAAAAAGAGGGAACTCAGATGAAGTTTTGAGACTCTACAAGGACATGAGAGATAAGGATATTGTTCCAAGTAACTATACTTGTTCTTCACTTCTGACGTTGTTTTACAAGAATGGAGATTATTCTAAAGCCCTCTCTCTGTTTTCAGAGATGGAAAGCAAAAAAGTTGTGGTTGATGAAGTTATATATGGATTACTTATTAGAATATATGGAAAACTGGGTCTATATGAGGATGCCCATAAAACATTTGAAGAAATGGAGCAGCTAGGTTTACTTACAGATGAGAAAAGCTATTTGGCAATGGCTCAAGTCCATCTCAGTTCAAGGAACTTTGAGAAAGCTTTAAACATAATTGAGTTGATGAAATCTAGAAACATTTGGTTGTCAAGATTTGCTTATATAGTATCATTGCAATGTTATGTTATGAAAGAAGATATAAGGTCTGCAGAATCCACATTTCAAGCTTTATCCAAAACTGGACTTCCTGATGCTCGTTCTTGTATTAATATTCTCAATTTGTATTTAAAACTAAACTTGGTGAACAAGGCTAAAGATTTTATAGCCCATATAAGAAAGGATGGGGTAGTTTTTGATGAGGAACTTTATAAATTGGTTATGAGAGTCTATTGCAAGGAGGGGATGTCAAAAGATGCTGAGATTTTAATTAAACTTATGAAGAAGGATGAATTATTTGTTGATAATAAATTTGTGGAGACATTTTCATTTATGTTTAAACTTGATGGAGGTGAGATAAATGAAAACACAATTGTCGGCTATGACCAACCTGATCATATGGCTCTTGATATGATACTTCGGCTGTATTTGGCAAATGGTGATGTTGGTAAAAGGAGTAAGATCCTGAAATTAATACTTGGGAAAGGAGGCGTGACCATTGCGAGTCAACTTGTAGCTAATTTGATTAGAGAAGGCAAGAAAATGACTCGTGATGCATTGAAAGCAGGAACTCTTACAAAAGAATTACTCAAGCTTGACTGCCGACTAGATGATGCTACTATAGCTTCCTTAATCAGTTTGTATGGGAAAGAGAAGAAAATAAATCAAGCAGCAGAAATTTTGGCAGCAGTTGCAGATTCTTGCACATCAAAATTGATTTTTGGTTCCATGATTGATGCCTATATCAAATGTGATAAAGCTGAAGAAGCATTCACACTTTACAAAGAACTAGTTGAAAAAGGATATGATCTTGGTGCTGTTGCTGTCAGCAGAATAGTGAATACTTTGACTGTTGGTGGTATGTTGTGGAGTCATATACGTGATCAGCATACTGGAAAACATCAAGTGGCAGAGAATGTGATACGTGCTAGTCTTAATTGTGGCTTGGAGCTTGATACAGTGGCATTCAATACATTTATCAAGGCAATGCTGGAGGCAGGGAAATTGCATTTTGCATCCAGAATATATGAGCATATGATTGCTCTTGACATTGTACCATCAATTCAGACATATAACACCATGATTAGTGTCTATGGACGTGGTCGGAAGCTCGATAAGGCTGTGGCAATGTTTAATGCAGCTCGCAGCTCAGGCCTCTCTCCCGATGAAAAGGCATATACAAACCTGATTAGCTGCTATGGGAAGGCTGGTAAGACGCATGAAGCAAGCTTGCTGTTCAAAGAAATGCTGGAAGAAGGGGTTAAACCTGGGATGGTCAGCTACAATATTATGGTCAATGTATATGCTAATGCCGGACTTCATGAAGAAACAGAGAAGCTTTTCAAAGCAATGGAGCAAGATGGTTTCTTACCCGATTCTTTTACCTACTTCTCGCTCATTCGAGCTTACACACAGAGTTGCAATTATTCCGAAGCAAAGAAAATCATTAACTCTATGCAGGAAAATGGCATCCCCGCGTCTTGTGCACATTACGACCTGTTGCTCTCAGCTTTGGCAAAGGCAGGAATGATAAGGAAAGCAGAAAGAGTCTATGACAAACTTCAAACAGCTGGTCTAAATCCCGACGTTACATGCAATCGGAACCTGATGAGAGGTTACCTAGACTATGGATATGTCAAAGAAGGCATCAAGTTCTTTGAATCTACATGCAAATATGCAGGAGACAGGTTTATAATGAGTGCAGCTGTGCATTTTTATAAGGTTGAAAGAAAGGAGGATGAAGCATTGAATATTTTGGATTCCATGAAAATTTTGGGTATTTCATTCTTGAAAGACCTTCGAGTCGGATCGAAGCTAGAGTCTGCTTGAGCCTTAGCATACTCGGTGATCCGATTTGCAGATTGTCATTTGACTGAGAAGCAAAGGGAATTGAGAAGATGCACATATTGGAGGACGTACTGGATATATGAATATTATACATGGCGCTCTAATATATGGCTCTTGGACCAATGTGTTCGTCAAACACCTTGGAATGATAGCAGAAACGTCCTGGGTTACTTAAGGAAGTTGAGGATGATAAATGGGATCGAAAGATTTTATCAACTAATCTGACTGCTGTTGTGATCTCTCTTTCCGGTCTTGCTGAGATGGGGTTATGACACAGTATCAAGGAATTTTATTGTCCTGGATTGCTTAATTTTGTTATTTACGCCATACCGATATGACAACCGAGGCTGAAAAGTAATGTTGATTGGATGAAGATGGCATCTTCTTATCGATTTAGAAACTGTTCTGAAGAAGTTGCATGAGCTTGTGAACAGAATATTTATTGTGCTGGAAGTTATCAAGGGTAATGGGAAATATATTAGCAATTTAGAGTGTAATCCTCATGTTGCTTGTTGATCTAGTTTGTATCATATTTTCATGTATCTTTTAAGTTTGTTTCTAAACTAACGCCACGTTTATCAAATTGTAATGAAAATTGGTGTAATCGTAATAGAATTTCATTGATAGATCAATCGTAA

Coding sequence (CDS)

TACTGTCCTCGCTTATCCGGTAAGCTCTACCAGATGTCTCAGAACGAGCAACAAATTTCGCGAAATCATGTTATGGAGTCCCTCAAGACTTCATTCCTCAGGCCAATCCTCCTCCCTTCCCCTTCCAATCGCAGCACCCGCTGCCCGTTAAAGTCCAGAAACGTCCAAATTTTTATCGTCCGCTCATCAGTAACGCCCGATCCTTGGTCTCTCAGCGATGGCAATCCCGCAAGACCAAAACCCAGGTCCAAAAACGCCAAAAAGCCGCTCTCCGACGACAACGCCCGCCGAATCATCAGGGCCAAGGCTCAGTACCTCAGTGTACTGCGTCGAAATCAGGGCCCCAGAGCTCAAACGCCCAAATGGATCAAGAGAACTCCGGAGCAGATGGTGCAGTACCTTGAGGACGATAGAAATGGCCACCTCTATGGAAAGCATGTGGTGGCGGCGATTAGGCACGTGCGGAGTTTATCTCAGAAAATCGAGGGAGAGTACGATATGAGGATGGAGATGGCTTCTTTTGTTGGAAAATTGACCTTTAGGGAGATGTGTATTGTGCTTAAGGAGCAGAAGGGGTGGAGGCAGGTCAGAGATGTATTTGATTGGATGAAATTGCAGTTGAGTTATCGCCCAAGTGTCATTGTCTACACAATTGTTTTGCGCACATATGGGCAAGTTGGAAAAATAAAGCTGGCTGAAGAAACTTTCTTGGAGATGCTTGAAGTTGGATTAGAACCAGATGAAGTTGCTTGTGGAACGATGTTATGTACATATGCCAGATGGGGACATCATAAGGCTATGTTGTCTTTCTATTCTGCTGTTAAGGATAGGGGAATTATACCTTCTATGGCCGTTTTCAATTTTATGCTGTCCTCTTTGCAGAAGAAGGGACTCCATGCTAAGGTCAAAGAATTATGGATGCAGATGGTAGAGATAGGAGTGACATTCAATGATTTTACCTATACAGTAGTTATCAACTCACTTGTTAAGGAAGGCCATAGTGAGGAGGCTTTCAAAGTTTTCAATGAGATGAAGAACTGTGGGTTTGTTCCTGAAGAGGTGACTTATAACCTACTTATTAGTTTAAGCATAAAAAGAGGGAACTCAGATGAAGTTTTGAGACTCTACAAGGACATGAGAGATAAGGATATTGTTCCAAGTAACTATACTTGTTCTTCACTTCTGACGTTGTTTTACAAGAATGGAGATTATTCTAAAGCCCTCTCTCTGTTTTCAGAGATGGAAAGCAAAAAAGTTGTGGTTGATGAAGTTATATATGGATTACTTATTAGAATATATGGAAAACTGGGTCTATATGAGGATGCCCATAAAACATTTGAAGAAATGGAGCAGCTAGGTTTACTTACAGATGAGAAAAGCTATTTGGCAATGGCTCAAGTCCATCTCAGTTCAAGGAACTTTGAGAAAGCTTTAAACATAATTGAGTTGATGAAATCTAGAAACATTTGGTTGTCAAGATTTGCTTATATAGTATCATTGCAATGTTATGTTATGAAAGAAGATATAAGGTCTGCAGAATCCACATTTCAAGCTTTATCCAAAACTGGACTTCCTGATGCTCGTTCTTGTATTAATATTCTCAATTTGTATTTAAAACTAAACTTGGTGAACAAGGCTAAAGATTTTATAGCCCATATAAGAAAGGATGGGGTAGTTTTTGATGAGGAACTTTATAAATTGGTTATGAGAGTCTATTGCAAGGAGGGGATGTCAAAAGATGCTGAGATTTTAATTAAACTTATGAAGAAGGATGAATTATTTGTTGATAATAAATTTGTGGAGACATTTTCATTTATGTTTAAACTTGATGGAGGTGAGATAAATGAAAACACAATTGTCGGCTATGACCAACCTGATCATATGGCTCTTGATATGATACTTCGGCTGTATTTGGCAAATGGTGATGTTGGTAAAAGGAGTAAGATCCTGAAATTAATACTTGGGAAAGGAGGCGTGACCATTGCGAGTCAACTTGTAGCTAATTTGATTAGAGAAGGCAAGAAAATGACTCGTGATGCATTGAAAGCAGGAACTCTTACAAAAGAATTACTCAAGCTTGACTGCCGACTAGATGATGCTACTATAGCTTCCTTAATCAGTTTGTATGGGAAAGAGAAGAAAATAAATCAAGCAGCAGAAATTTTGGCAGCAGTTGCAGATTCTTGCACATCAAAATTGATTTTTGGTTCCATGATTGATGCCTATATCAAATGTGATAAAGCTGAAGAAGCATTCACACTTTACAAAGAACTAGTTGAAAAAGGATATGATCTTGGTGCTGTTGCTGTCAGCAGAATAGTGAATACTTTGACTGTTGGTGGTATGTTGTGGAGTCATATACGTGATCAGCATACTGGAAAACATCAAGTGGCAGAGAATGTGATACGTGCTAGTCTTAATTGTGGCTTGGAGCTTGATACAGTGGCATTCAATACATTTATCAAGGCAATGCTGGAGGCAGGGAAATTGCATTTTGCATCCAGAATATATGAGCATATGATTGCTCTTGACATTGTACCATCAATTCAGACATATAACACCATGATTAGTGTCTATGGACGTGGTCGGAAGCTCGATAAGGCTGTGGCAATGTTTAATGCAGCTCGCAGCTCAGGCCTCTCTCCCGATGAAAAGGCATATACAAACCTGATTAGCTGCTATGGGAAGGCTGGTAAGACGCATGAAGCAAGCTTGCTGTTCAAAGAAATGCTGGAAGAAGGGGTTAAACCTGGGATGGTCAGCTACAATATTATGGTCAATGTATATGCTAATGCCGGACTTCATGAAGAAACAGAGAAGCTTTTCAAAGCAATGGAGCAAGATGGTTTCTTACCCGATTCTTTTACCTACTTCTCGCTCATTCGAGCTTACACACAGAGTTGCAATTATTCCGAAGCAAAGAAAATCATTAACTCTATGCAGGAAAATGGCATCCCCGCGTCTTGTGCACATTACGACCTGTTGCTCTCAGCTTTGGCAAAGGCAGGAATGATAAGGAAAGCAGAAAGAGTCTATGACAAACTTCAAACAGCTGGTCTAAATCCCGACGTTACATGCAATCGGAACCTGATGAGAGGTTACCTAGACTATGGATATGTCAAAGAAGGCATCAAGTTCTTTGAATCTACATGCAAATATGCAGGAGACAGGTTTATAATGAGTGCAGCTGTGCATTTTTATAAGGTTGAAAGAAAGGAGGATGAAGCATTGAATATTTTGGATTCCATGAAAATTTTGGGTATTTCATTCTTGAAAGACCTTCGAGTCGGATCGAAGCTAGAGTCTGCTTGA

Protein sequence

YCPRLSGKLYQMSQNEQQISRNHVMESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSKNAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQPDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA
Homology
BLAST of Lsi10G002250 vs. ExPASy Swiss-Prot
Match: O04647 (Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana OX=3702 GN=EMB976 PE=2 SV=2)

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 572/1050 (54.48%), Postives = 741/1050 (70.57%), Query Frame = 0

Query: 30   TSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSKNAKKP 89
            T F   I LP   +R++R  +KS +       S V PDPWSLSDGNP +PKPR +  K P
Sbjct: 10   THFNPSIFLPKIPSRNSRISIKSSSSS-----SKVRPDPWSLSDGNPEKPKPRYERPKHP 69

Query: 90   LSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVA 149
            LSDD+ARRII+ KAQYLS LRRNQG +A TPKWIKRTPEQMVQYLEDDRNG +YGKHVVA
Sbjct: 70   LSDDDARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNGQMYGKHVVA 129

Query: 150  AIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSY 209
            AI+ VR LSQ+ +G  DMR  M+SFV KL+FR+MC+VLKEQ+GWRQVRD F WMKLQLSY
Sbjct: 130  AIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSY 189

Query: 210  RPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLS 269
            RPSV+VYTIVLR YGQVGKIK+AEETFLEMLEVG EPD VACGTMLCTYARWG H AML+
Sbjct: 190  RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 249

Query: 270  FYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVVINSLV 329
            FY AV++R I+ S +V+NFMLSSLQKK  H KV +LW++MVE GV  N+FTYT+V++S  
Sbjct: 250  FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 309

Query: 330  KEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNY 389
            K+G  EEA K F EMK+ GFVPEEVTY+ +ISLS+K G+ ++ + LY+DMR + IVPSNY
Sbjct: 310  KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 369

Query: 390  TCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEM 449
            TC+++L+L+YK  +Y KALSLF++ME  K+  DEVI GL+IRIYGKLGL+ DA   FEE 
Sbjct: 370  TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 429

Query: 450  EQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDI 509
            E+L LL DEK+YLAM+QVHL+S N  KAL++IE+MK+R+I LSRFAYIV LQCY   +++
Sbjct: 430  ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNV 489

Query: 510  RSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVM 569
              AE  F+ALSKTGLPDA SC ++LNLY +LNL  KAK FI  I  D V FD ELYK  M
Sbjct: 490  DCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAM 549

Query: 570  RVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQPDHMA 629
            RVYCKEGM  +A+ LI  M ++    DN+FV+T +    +         ++   Q D MA
Sbjct: 550  RVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMA 609

Query: 630  LDMILRLYLANGDVGKRSKILKLILGKG-GVTIASQLVANLIREGKKMTRDALKAGTLTK 689
            L ++L L L  G++ +   IL L+     G +  ++++++ +REG     D  KA  +  
Sbjct: 610  LGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREG-----DVSKAEMIAD 669

Query: 690  ELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCT-SKLIFGSMIDAYIKCDK 749
             +++L  R+++ TIA+LI++YG++ K+ +A  +  A  +S T  K +  SMIDAY++C  
Sbjct: 670  IIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGW 729

Query: 750  AEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRASLN 809
             E+A+ L+ E  EKG D GAV +S +VN LT            + GKH+ AE++ R  L 
Sbjct: 730  LEDAYGLFMESAEKGCDPGAVTISILVNALT------------NRGKHREAEHISRTCLE 789

Query: 810  CGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDK 869
              +ELDTV +NT IKAMLEAGKL  AS IYE M    +  SIQTYNTMISVYGRG +LDK
Sbjct: 790  KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 849

Query: 870  AVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVN 929
            A+ +F+ AR SGL  DEK YTN+I  YGK GK  EA  LF EM ++G+KPG  SYN+MV 
Sbjct: 850  AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 909

Query: 930  VYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPA 989
            + A + LH E ++L +AME++G   D  TY +LI+ Y +S  ++EA+K I  ++E GIP 
Sbjct: 910  ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPL 969

Query: 990  SCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFF 1049
            S +H+  LLSAL KAGM+ +AER Y K+  AG++PD  C R +++GY+  G  ++GI F+
Sbjct: 970  SHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFY 1029

Query: 1050 ESTCKYA--GDRFIMSAAVHFYKVERKEDE 1076
            E   + +   DRF+ S     YK   KE +
Sbjct: 1030 EKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037

BLAST of Lsi10G002250 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.5e-52
Identity = 194/826 (23.49%), Postives = 353/826 (42.74%), Query Frame = 0

Query: 211  PSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSF 270
            P V+ YT+++       K+  A+E F +M     +PD V   T+L  ++      ++  F
Sbjct: 291  PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350

Query: 271  YSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVVINSLVK 330
            +S ++  G +P +  F  ++ +L K G   +  +    M + G+  N  TY  +I  L++
Sbjct: 351  WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410

Query: 331  EGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNYT 390
                ++A ++F  M++ G  P   TY + I    K G+S   L  ++ M+ K I P+   
Sbjct: 411  VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470

Query: 391  CSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEME 450
            C++ L    K G   +A  +F  ++   +V D V Y ++++ Y K+G  ++A K   EM 
Sbjct: 471  CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530

Query: 451  QLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDIR 510
            + G   D     ++      +   ++A  +   MK   +  +   Y   L        I+
Sbjct: 531  ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590

Query: 511  SAESTFQALSKTGLPDARSCINIL-NLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVM 570
             A   F+ + + G P      N L +   K + V  A   +  +   G V D   Y  ++
Sbjct: 591  EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650

Query: 571  RVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKL-------DGGEINENTIVG- 630
                K G  K+A      MKK    V   FV   + +  +       D  +I  N +   
Sbjct: 651  FGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 710

Query: 631  YDQPDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDAL 690
             DQP ++  + ++   LA   +       + ++  G       ++  +IR   K   +  
Sbjct: 711  ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK-HNNVS 770

Query: 691  KAGTLTKELLK-LDCRLDDATIASLISLYGKEKKINQAAEILAAV-ADSCTSKL-IFGSM 750
             A TL ++  K L  +    T   LI    +   I  A ++   V +  C   +  +  +
Sbjct: 771  GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 830

Query: 751  IDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVA 810
            +DAY K  K +E F LYKE+     +   +  + +++ L   G    ++ D     + + 
Sbjct: 831  LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG----NVDDALDLYYDLM 890

Query: 811  ENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISV 870
             +   +   C        +   I  + ++G+L+ A +++E M+     P+   YN +I+ 
Sbjct: 891  SDRDFSPTAC-------TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 950

Query: 871  YGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPG 930
            +G+  + D A A+F      G+ PD K Y+ L+ C    G+  E    FKE+ E G+ P 
Sbjct: 951  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 1010

Query: 931  MVSYNIMVNVYANAGLHEETEKLFKAMEQD-GFLPDSFTYFSLIRAYTQSCNYSEAKKII 990
            +V YN+++N    +   EE   LF  M+   G  PD +TY SLI     +    EA KI 
Sbjct: 1011 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1070

Query: 991  NSMQENGIPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPD 1024
            N +Q  G+  +   ++ L+   + +G    A  VY  + T G +P+
Sbjct: 1071 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

BLAST of Lsi10G002250 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-47
Identity = 178/750 (23.73%), Postives = 324/750 (43.20%), Query Frame = 0

Query: 307  MQMVEIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKR 366
            M +   G + N  T   ++   VK     E + V   M+   F P    Y  LI      
Sbjct: 124  MSVAGFGPSVN--TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 183

Query: 367  GNSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIY 426
             +SD +L L++ M++    P+ +  ++L+  F K G    ALSL  EM+S  +  D V+Y
Sbjct: 184  NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 243

Query: 427  GLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKS 486
             + I  +GK+G  + A K F E+E  GL  DE +Y +M  V   +   ++A+ + E ++ 
Sbjct: 244  NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 303

Query: 487  RNIWLSRFAYIVSLQCYVMKEDIRSAESTFQ-ALSKTGLPDARSCINILNLYLKLNLVNK 546
                   +AY   +  Y        A S  +   +K  +P   +   IL    K+  V++
Sbjct: 304  NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 363

Query: 547  AKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSF 606
            A      ++KD    +   Y +++ + C+ G    A  L   M+K  LF +   V T + 
Sbjct: 364  ALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN---VRTVNI 423

Query: 607  MF-KLDGGEINENTIVGYDQPDHMAL--DMILRLYLANGDVGKRSKILKLILGKGGVTIA 666
            M  +L   +  +     +++ D+     D I    L +G            LGK G    
Sbjct: 424  MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG------------LGKVG---- 483

Query: 667  SQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEIL 726
                            DA K   + +++L  DCR +     SLI  +    +     +I 
Sbjct: 484  -------------RVDDAYK---VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 543

Query: 727  A-AVADSCTSKL-IFGSMIDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVG 786
               +  +C+  L +  + +D   K  + E+   +++E+  + +   A + S +++ L   
Sbjct: 544  KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 603

Query: 787  GMLWSHIRDQHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHM 846
            G         ++ K Q            G  LDT A+N  I    + GK++ A ++ E M
Sbjct: 604  GFANETYELFYSMKEQ------------GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 663

Query: 847  IALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKT 906
                  P++ TY ++I    +  +LD+A  +F  A+S  +  +   Y++LI  +GK G+ 
Sbjct: 664  KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 723

Query: 907  HEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSL 966
             EA L+ +E++++G+ P + ++N +++    A    E    F++M++    P+  TY  L
Sbjct: 724  DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 783

Query: 967  IRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGL 1026
            I    +   +++A      MQ+ G+  S   Y  ++S LAKAG I +A  ++D+ +  G 
Sbjct: 784  INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 823

Query: 1027 NPDVTCNRNLMRGYLDYGYVKEGIKFFEST 1051
             PD  C   ++ G  +     +    FE T
Sbjct: 844  VPDSACYNAMIEGLSNGNRAMDAFSLFEET 823

BLAST of Lsi10G002250 vs. ExPASy Swiss-Prot
Match: Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 8.5e-45
Identity = 199/929 (21.42%), Postives = 389/929 (41.87%), Query Frame = 0

Query: 177  KLTFREMCIVLKE--QKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRTYGQVGKIKLAEE 236
            ++T  + C V+K   Q+ W++  +VF+W+ L+  + P+  +   +L   G+  +  LA E
Sbjct: 153  QMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVE 212

Query: 237  TFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSMAVFNFMLSS-L 296
             F    E  +         M+  Y+R G          A++ RG +P +  FN ++++ L
Sbjct: 213  IFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 272

Query: 297  QKKGLHAKVKELWMQMV-EIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPE 356
            +  GL   +    + MV   G+  +  TY  ++++  ++ + + A KVF +M+     P+
Sbjct: 273  KSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD 332

Query: 357  EVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFS 416
              TYN +IS+  + G + E  RL+ ++  K   P   T +SLL  F +  +  K   ++ 
Sbjct: 333  LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 392

Query: 417  EMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQL-GLLTDEKSYLAMAQVHLSS 476
            +M+      DE+ Y  +I +YGK G  + A + +++M+ L G   D  +Y  +      +
Sbjct: 393  QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 452

Query: 477  RNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSC 536
                +A  ++  M    I  +   Y   +  Y        AE TF  + ++G  PD  + 
Sbjct: 453  NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 512

Query: 537  INILNLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKK 596
              +L++ L+ N   KA      +  DG      LY+L++    KE  S D +  I+ M++
Sbjct: 513  SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 572

Query: 597  ----DELFVDNKFVETFSFMFKLDGGEINENTIVGYDQPDHMALDMILRLYLANGDVGKR 656
                + L + +  V+     F L   ++      GY+    +  D +L +  +    G+ 
Sbjct: 573  LCGMNPLEISSVLVK--GECFDLAARQLKVAITNGYE----LENDTLLSILGSYSSSGRH 632

Query: 657  SKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLI 716
            S+  +L+          + +       K++         +T+ L+ L C+++        
Sbjct: 633  SEAFELL----------EFLKEHASGSKRL---------ITEALIVLHCKVN-------- 692

Query: 717  SLYGKEKKINQAAEILAAVADSCTSKLIFGS--MIDAYIKCDKAEEAFTLYKELVEKGYD 776
                     N +A +    AD C     FGS  M +  + C  A E +            
Sbjct: 693  ---------NLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHY------------ 752

Query: 777  LGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRAS--LNCGLELDTVAFNTFIK 836
                  S++ + L + G              + +E+V ++   + C L     A     +
Sbjct: 753  ---AEASQVFSDLRLSGC-------------EASESVCKSMVVVYCKLGFPETAHQVVNQ 812

Query: 837  AMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSP 896
            A  E    HFA                  Y  +I  YG+ +   KA ++    R SG +P
Sbjct: 813  A--ETKGFHFACS--------------PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 872

Query: 897  DEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLF 956
            D K + +L+S Y + G    A  +F  M+ +G  P + S NI+++     G  EE   + 
Sbjct: 873  DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 932

Query: 957  KAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKA 1016
            + ++  GF     +   ++ A+ ++ N  E KKI +SM+  G   +   Y +++  L K 
Sbjct: 933  EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 992

Query: 1017 GMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFFESTCKYAG---DRFI 1076
              +R AE +  +++ A    ++    ++++ Y      K+ ++ ++   K  G   D   
Sbjct: 993  KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQ-RIKETGLEPDETT 993

Query: 1077 MSAAVHFYKVERKEDEALNILDSMKILGI 1089
             +  +  Y  +R+ +E   ++  M+ LG+
Sbjct: 1053 YNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993

BLAST of Lsi10G002250 vs. ExPASy Swiss-Prot
Match: O80958 (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LOJ PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-44
Identity = 172/756 (22.75%), Postives = 323/756 (42.72%), Query Frame = 0

Query: 243 GLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKV 302
           G E    A   +L  Y R       +  +  + DR ++P +   N +LSSL +  L  + 
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 303 KELWMQMVEIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISL 362
           KE++ +MV IGV  ++ T  +++ + ++E   EEA K+F  + + G  P+ + ++L +  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 363 SIKRGNSDEVLRLYKDMRDKDIVP-SNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVV 422
           + K  +    L L ++MR K  VP S  T +S++  F K G+  +A+ +  EM    + +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343

Query: 423 DEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNII 482
             +    L+  Y K      A   F  ME+ GL  D+  +  M +    +   EKA+   
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403

Query: 483 ELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLN 542
             MKS  I  S       +Q  +  E   +A   F    ++ +     C  I  L+ K  
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463

Query: 543 LVNKAKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVE 602
            V+ A  F+  + + G+  +   Y  +M  +C+      A  +   M +  L  +N    
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN---- 523

Query: 603 TFSFMFKLDGGEINENTIVGYDQPDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTI 662
            F++   +DG   N++        +  A D+I ++  +N +                   
Sbjct: 524 -FTYSILIDGFFKNKD--------EQNAWDVINQMNASNFE------------------- 583

Query: 663 ASQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEI 722
           A++++ N I  G        KA  + + L+                   KEK+ +     
Sbjct: 584 ANEVIYNTIINGLCKVGQTSKAKEMLQNLI-------------------KEKRYSM---- 643

Query: 723 LAAVADSCTSKLIFGSMIDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGG 782
                 SCTS   + S+ID ++K    + A   Y+E+ E G     V  + ++N     G
Sbjct: 644 ------SCTS---YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN-----G 703

Query: 783 MLWSHIRDQHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMI 842
              S+  D       +A  +     +  L+LD  A+   I    +   +  A  ++  + 
Sbjct: 704 FCKSNRMD-------LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 763

Query: 843 ALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTH 902
            L ++P++  YN++IS +    K+D A+ ++    + G+S D   YT +I    K G  +
Sbjct: 764 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 823

Query: 903 EASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLI 962
            AS L+ E+L+ G+ P  + + ++VN  +  G   +  K+ + M++    P+   Y ++I
Sbjct: 824 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 843

Query: 963 RAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLS 998
             + +  N +EA ++ + M E GI      ++LL+S
Sbjct: 884 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843

BLAST of Lsi10G002250 vs. ExPASy TrEMBL
Match: A0A0A0KE22 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G118350 PE=3 SV=1)

HSP 1 Score: 1944.1 bits (5035), Expect = 0.0e+00
Identity = 989/1079 (91.66%), Postives = 1026/1079 (95.09%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP P  R+TR PLKSRN QIFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPFIRTTRSPLKSRNAQIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEY+MRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYNMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            K MLSFYSAVKDRGI+P +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTF+DFTYTVV
Sbjct: 241  KTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFSDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAFKVFNEMKNCGF+PEEVTYNLLISLSIKR NSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKL+LVNKAKDFIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLV+RVYCKEG+S+DAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVLRVYCKEGLSEDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KR+KILK I+GKGGVT+ SQLVANLIREG     D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRNKILKFIIGKGGVTVVSQLVANLIREG-----DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDA IASLISLYGKE+KINQAAE+LAAVA+SCTS LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDAIIASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEA TLYKEL+EKGYDLGAVAVSRIVNTLTVG            GKH+VAENV+RA
Sbjct: 721  CDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVVRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL IVPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE L KAMEQD  +PDSFTYFSLIRAYTQSC YSEA+KIINSMQE G
Sbjct: 901  MVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP +CAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            KFFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LG+SFLKDL++G KLESA
Sbjct: 1021 KFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGLSFLKDLQIGLKLESA 1062

BLAST of Lsi10G002250 vs. ExPASy TrEMBL
Match: A0A1S3CJB8 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 OS=Cucumis melo OX=3656 GN=LOC103501077 PE=3 SV=1)

HSP 1 Score: 1937.2 bits (5017), Expect = 0.0e+00
Identity = 990/1079 (91.75%), Postives = 1023/1079 (94.81%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEME+KKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMEAKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKL+L+NKAK+FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KRSKILK ILGKGGVT+ SQLVANLIREG     D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREG-----DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG            GKH+VAENVIRA
Sbjct: 721  CDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL +VPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE LFK MEQD  LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE G
Sbjct: 901  MVNVYANAGLHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTSCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            +FFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LGISFLKDL++G KLESA
Sbjct: 1021 EFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1062

BLAST of Lsi10G002250 vs. ExPASy TrEMBL
Match: A0A5A7THY4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold943G00180 PE=3 SV=1)

HSP 1 Score: 1892.1 bits (4900), Expect = 0.0e+00
Identity = 979/1113 (87.96%), Postives = 1014/1113 (91.11%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDA+                    FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDAQ--------------------FIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTR---DAL 684
            PDH+ALDMILRLYLANGDV KRSKILK ILGKGGVT+ SQLVANLIREGKK+T    D+L
Sbjct: 601  PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREGKKITHFFCDSL 660

Query: 685  KAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDA 744
            KAGTLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDA
Sbjct: 661  KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720

Query: 745  YIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGM-LWSHIRD----------- 804
            YIKCDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG   ++ +IR            
Sbjct: 721  YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGAQTVFLNIRRLKKKEKLRLEL 780

Query: 805  -------------------QHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKL 864
                                 +GKH+VAENVIRASLNCGLELDTVAFNTFIKAMLE GKL
Sbjct: 781  SVRLNADWLGGIDSSSQPIPSSGKHRVAENVIRASLNCGLELDTVAFNTFIKAMLEGGKL 840

Query: 865  HFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNL 924
            HFASRIYEHMIAL +VPSIQTYNTMISVYGRGRKLDKAV MFNAARSSGLSPDEKAYTNL
Sbjct: 841  HFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNL 900

Query: 925  ISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGF 984
            IS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETE LFK MEQD  
Sbjct: 901  ISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLFKVMEQDSV 960

Query: 985  LPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKAGMIRKAER 1044
            LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE GIP SCAHYDLLLSALAKAGMIRKAER
Sbjct: 961  LPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1020

Query: 1045 VYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFFESTCKYAGDRFIMSAAVHFYKVE 1104
            VYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI+FFESTCKYAGDRFIMSAAVHFYK E
Sbjct: 1021 VYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKYAGDRFIMSAAVHFYKAE 1080

BLAST of Lsi10G002250 vs. ExPASy TrEMBL
Match: A0A5D3BQE2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001870 PE=3 SV=1)

HSP 1 Score: 1886.7 bits (4886), Expect = 0.0e+00
Identity = 968/1079 (89.71%), Postives = 999/1079 (92.59%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKL+L+NKAK+FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KRS                               D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRS-------------------------------DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG            GKH+VAENVIRA
Sbjct: 721  CDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL +VPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE LFK MEQD  LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE G
Sbjct: 901  MVNVYANAGLHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTSCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            +FFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LGISFLKDL++G KLESA
Sbjct: 1021 EFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1036

BLAST of Lsi10G002250 vs. ExPASy TrEMBL
Match: A0A6J1D3B2 (pentatricopeptide repeat-containing protein At5g27270 OS=Momordica charantia OX=3673 GN=LOC111017215 PE=3 SV=1)

HSP 1 Score: 1861.3 bits (4820), Expect = 0.0e+00
Identity = 952/1080 (88.15%), Postives = 1000/1080 (92.59%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSF  PILLP  SNRS RCP +SR  Q FI+ SSVTPDPWSLSDGNP +PKPRSK
Sbjct: 1    MESLKTSFFTPILLPPISNRSRRCPSESRKPQFFIIHSSVTPDPWSLSDGNPEKPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQ+ EGEYDMRMEMASFVGKLTFREMC VLKEQKGWRQ RDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQRGEGEYDMRMEMASFVGKLTFREMCTVLKEQKGWRQXRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIPS+AVFNFMLSSLQKKGLHAKV ELW QMVEIGVTFN+FTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVHELWRQMVEIGVTFNEFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAFKVFN+MK CGFVPEEVTYNLLISLSIK GNSDEVL LYKDMR+K+I
Sbjct: 301  INSLVKEGHSEEAFKVFNDMKICGFVPEEVTYNLLISLSIKGGNSDEVLXLYKDMREKEI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDYSKALSLF EMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYSKALSLFLEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRF+YIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFSYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDARSC NILNLYLKL+ V KAKDFIA IRKDGVVFDEEL
Sbjct: 481  MKEDIRSVESTFQALSKTGLPDARSCFNILNLYLKLDXVEKAKDFIAQIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEGM KDA+ILI++M+KDE F+DNKFVETFSFM KLDGG+I EN IVGYDQ
Sbjct: 541  YKLVMRVYCKEGMLKDAKILIEVMRKDESFLDNKFVETFSFMIKLDGGDIKENAIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PD+MAL MILRLYLANGDVGKR+KILKLILGKGG+ + SQLV NLIREG     DA KAG
Sbjct: 601  PDYMALGMILRLYLANGDVGKRNKILKLILGKGGMMVVSQLVTNLIREG-----DAFKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELL LDCRLDDATIASLISLYGKEKKINQAAEI AAVADS TSKLI G+MIDAY K
Sbjct: 661  TLTKELLNLDCRLDDATIASLISLYGKEKKINQAAEIFAAVADSSTSKLICGTMIDAYTK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEA+TLYKEL+ KG DLGAVAVSRIVNTLT+G            GKHQVAENVIRA
Sbjct: 721  CDKAEEAYTLYKELIXKGNDLGAVAVSRIVNTLTIG------------GKHQVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            S+ CGLELDTVAFNTFIKAMLEAGKLHFAS+I+EHMIAL IVPSIQTYNTMISVYGRGRK
Sbjct: 781  SIKCGLELDTVAFNTFIKAMLEAGKLHFASKIFEHMIALGIVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKA+ MFNAARSSG+SPDEKAYTNLISCYGKAGKT+EASLLFKEMLEEG+KPGMVSYNI
Sbjct: 841  LDKAIEMFNAARSSGVSPDEKAYTNLISCYGKAGKTNEASLLFKEMLEEGIKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            M+NVYA  GLHEETEKLF+AMEQD FLPDS +YFSLIRAYTQSC YSEA+++INSM+E G
Sbjct: 901  MINVYATVGLHEETEKLFRAMEQDSFLPDSVSYFSLIRAYTQSCKYSEAEEVINSMKEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAH+DLLLSALAKAGMIRKAERVYD+L+TAGLNPDVTCNR+LMRGYLDYGYV+EGI
Sbjct: 961  IPTSCAHFDLLLSALAKAGMIRKAERVYDELRTAGLNPDVTCNRSLMRGYLDYGYVEEGI 1020

Query: 1045 KFFESTCKYA-GDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
             FFEST KYA GDRFIMSAAVHFY+   KE EALNIL+SMK L I FLKDLRVGSKLE+A
Sbjct: 1021 NFFESTWKYAEGDRFIMSAAVHFYRXAGKEVEALNILNSMKSLSILFLKDLRVGSKLETA 1063

BLAST of Lsi10G002250 vs. NCBI nr
Match: XP_038900459.1 (pentatricopeptide repeat-containing protein At5g27270 [Benincasa hispida])

HSP 1 Score: 1984.5 bits (5140), Expect = 0.0e+00
Identity = 1014/1079 (93.98%), Postives = 1038/1079 (96.20%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PI LPSPSNRSTR  LKS+N QIFI+RSSVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPIHLPSPSNRSTRYSLKSKNAQIFIIRSSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK +GEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTKGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGII S+AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIHSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGD+SKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDFSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKL+LVNKAKDFIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGEINENTIV YDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDHMALDMILRLYLANGD GKRSKILK ILGKGGVT+ SQLVANLIREG     D+LKAG
Sbjct: 601  PDHMALDMILRLYLANGDAGKRSKILKFILGKGGVTVVSQLVANLIREG-----DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
             LTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTS LIFGSMIDAYIK
Sbjct: 661  MLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEAFTLYKEL+EKGYDLGAVAVSRIVNTLTVG            GKH+VAENVIRA
Sbjct: 721  CDKAEEAFTLYKELIEKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIAL +VPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLI+CYGKAGKTHEASLLFKEMLEEG+KPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLINCYGKAGKTHEASLLFKEMLEEGIKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETEK+FKA+EQDGF PDSFTYFSLIRAYTQSC YSEA+KIINSMQE G
Sbjct: 901  MVNVYANAGLHEETEKVFKAIEQDGFSPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAHYDLLLSALAKAGMIRKAERVYD+LQTAGL PDVTCNR LMRGYLDYGYVKEGI
Sbjct: 961  IPTSCAHYDLLLSALAKAGMIRKAERVYDELQTAGLYPDVTCNRTLMRGYLDYGYVKEGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            KFFESTCKYAGDRFIMSAAVHFYKVE KEDEALNILDSMK LGISFLKDL+VGSK+ESA
Sbjct: 1021 KFFESTCKYAGDRFIMSAAVHFYKVEGKEDEALNILDSMKTLGISFLKDLQVGSKVESA 1062

BLAST of Lsi10G002250 vs. NCBI nr
Match: XP_004140061.1 (pentatricopeptide repeat-containing protein At5g27270 [Cucumis sativus] >KGN46657.1 hypothetical protein Csa_005270 [Cucumis sativus])

HSP 1 Score: 1944.1 bits (5035), Expect = 0.0e+00
Identity = 989/1079 (91.66%), Postives = 1026/1079 (95.09%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP P  R+TR PLKSRN QIFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPFIRTTRSPLKSRNAQIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEY+MRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYNMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            K MLSFYSAVKDRGI+P +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTF+DFTYTVV
Sbjct: 241  KTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFSDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAFKVFNEMKNCGF+PEEVTYNLLISLSIKR NSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKL+LVNKAKDFIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLV+RVYCKEG+S+DAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVLRVYCKEGLSEDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KR+KILK I+GKGGVT+ SQLVANLIREG     D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRNKILKFIIGKGGVTVVSQLVANLIREG-----DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDA IASLISLYGKE+KINQAAE+LAAVA+SCTS LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDAIIASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEA TLYKEL+EKGYDLGAVAVSRIVNTLTVG            GKH+VAENV+RA
Sbjct: 721  CDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVVRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL IVPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE L KAMEQD  +PDSFTYFSLIRAYTQSC YSEA+KIINSMQE G
Sbjct: 901  MVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP +CAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTTCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            KFFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LG+SFLKDL++G KLESA
Sbjct: 1021 KFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGLSFLKDLQIGLKLESA 1062

BLAST of Lsi10G002250 vs. NCBI nr
Match: XP_008462786.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 [Cucumis melo])

HSP 1 Score: 1937.2 bits (5017), Expect = 0.0e+00
Identity = 990/1079 (91.75%), Postives = 1023/1079 (94.81%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEME+KKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMEAKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKL+L+NKAK+FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KRSKILK ILGKGGVT+ SQLVANLIREG     D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREG-----DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG            GKH+VAENVIRA
Sbjct: 721  CDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL +VPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE LFK MEQD  LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE G
Sbjct: 901  MVNVYANAGLHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTSCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            +FFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LGISFLKDL++G KLESA
Sbjct: 1021 EFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1062

BLAST of Lsi10G002250 vs. NCBI nr
Match: KAA0042408.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1892.1 bits (4900), Expect = 0.0e+00
Identity = 979/1113 (87.96%), Postives = 1014/1113 (91.11%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDA+                    FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDAQ--------------------FIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTR---DAL 684
            PDH+ALDMILRLYLANGDV KRSKILK ILGKGGVT+ SQLVANLIREGKK+T    D+L
Sbjct: 601  PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREGKKITHFFCDSL 660

Query: 685  KAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDA 744
            KAGTLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDA
Sbjct: 661  KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720

Query: 745  YIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGM-LWSHIRD----------- 804
            YIKCDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG   ++ +IR            
Sbjct: 721  YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGAQTVFLNIRRLKKKEKLRLEL 780

Query: 805  -------------------QHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKL 864
                                 +GKH+VAENVIRASLNCGLELDTVAFNTFIKAMLE GKL
Sbjct: 781  SVRLNADWLGGIDSSSQPIPSSGKHRVAENVIRASLNCGLELDTVAFNTFIKAMLEGGKL 840

Query: 865  HFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNL 924
            HFASRIYEHMIAL +VPSIQTYNTMISVYGRGRKLDKAV MFNAARSSGLSPDEKAYTNL
Sbjct: 841  HFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNL 900

Query: 925  ISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGF 984
            IS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETE LFK MEQD  
Sbjct: 901  ISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLFKVMEQDSV 960

Query: 985  LPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKAGMIRKAER 1044
            LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE GIP SCAHYDLLLSALAKAGMIRKAER
Sbjct: 961  LPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1020

Query: 1045 VYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFFESTCKYAGDRFIMSAAVHFYKVE 1104
            VYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI+FFESTCKYAGDRFIMSAAVHFYK E
Sbjct: 1021 VYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKYAGDRFIMSAAVHFYKAE 1080

BLAST of Lsi10G002250 vs. NCBI nr
Match: TYK00992.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1886.7 bits (4886), Expect = 0.0e+00
Identity = 968/1079 (89.71%), Postives = 999/1079 (92.59%), Query Frame = 0

Query: 25   MESLKTSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSK 84
            MESLKTSFL PILLP PS R+TR PLK +N +IFI+R SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1    MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60

Query: 85   NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 144
            NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61   NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120

Query: 145  KHVVAAIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 204
            KHVVAAIRHVRSLSQK EGEYDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121  KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180

Query: 205  LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 264
            LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181  LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240

Query: 265  KAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 324
            KAMLSFYSAVKDRGIIP +AVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV
Sbjct: 241  KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300

Query: 325  INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 384
            INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI
Sbjct: 301  INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360

Query: 385  VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 444
            VPSNYTCSSLLTLFYKNGDY KALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK
Sbjct: 361  VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420

Query: 445  TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYV 504
            TFEEMEQLGLLTDEKSYLAMAQVHL+SRNFEKAL+IIELMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421  TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480

Query: 505  MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEEL 564
            MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKL+L+NKAK+FIAHIRKDGVVFDEEL
Sbjct: 481  MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540

Query: 565  YKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQ 624
            YKLVMRVYCKEG+SKDAEILI+LMKKDELFVDNKF+ETFSFMFKLDGGE NE+TIVGYDQ
Sbjct: 541  YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600

Query: 625  PDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAG 684
            PDH+ALDMILRLYLANGDV KRS                               D+LKAG
Sbjct: 601  PDHIALDMILRLYLANGDVSKRS-------------------------------DSLKAG 660

Query: 685  TLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSKLIFGSMIDAYIK 744
            TLTKELLKLDCRLDDATIASLISL+GKEKKINQAAEILAAVA SC S LIFGSMIDAYIK
Sbjct: 661  TLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDAYIK 720

Query: 745  CDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRA 804
            CDKAEEAFTLYKEL+ KGYDLGAVAVSRIVNTLTVG            GKH+VAENVIRA
Sbjct: 721  CDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVG------------GKHRVAENVIRA 780

Query: 805  SLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRK 864
            SLNCGLELDTVAFNTFIKAMLE GKLHFASRIYEHMIAL +VPSIQTYNTMISVYGRGRK
Sbjct: 781  SLNCGLELDTVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRK 840

Query: 865  LDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 924
            LDKAV MFNAARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEMLEEGVKPGMVSYNI
Sbjct: 841  LDKAVEMFNAARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNI 900

Query: 925  MVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENG 984
            MVNVYANAGLHEETE LFK MEQD  LPDSFTYFSLIRAYTQS  YSEA+K+INSMQE G
Sbjct: 901  MVNVYANAGLHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKG 960

Query: 985  IPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGI 1044
            IP SCAHYDLLLSALAKAGMIRKAERVYD+LQTAGL+PDVTCNR LMRGYLDYGYV+EGI
Sbjct: 961  IPTSCAHYDLLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGI 1020

Query: 1045 KFFESTCKYAGDRFIMSAAVHFYKVERKEDEALNILDSMKILGISFLKDLRVGSKLESA 1104
            +FFESTCKYAGDRFIMSAAVHFYK E KEDEALNILDSMK LGISFLKDL++G KLESA
Sbjct: 1021 EFFESTCKYAGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1036

BLAST of Lsi10G002250 vs. TAIR 10
Match: AT5G27270.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 572/1050 (54.48%), Postives = 741/1050 (70.57%), Query Frame = 0

Query: 30   TSFLRPILLPSPSNRSTRCPLKSRNVQIFIVRSSVTPDPWSLSDGNPARPKPRSKNAKKP 89
            T F   I LP   +R++R  +KS +       S V PDPWSLSDGNP +PKPR +  K P
Sbjct: 10   THFNPSIFLPKIPSRNSRISIKSSSSS-----SKVRPDPWSLSDGNPEKPKPRYERPKHP 69

Query: 90   LSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVA 149
            LSDD+ARRII+ KAQYLS LRRNQG +A TPKWIKRTPEQMVQYLEDDRNG +YGKHVVA
Sbjct: 70   LSDDDARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNGQMYGKHVVA 129

Query: 150  AIRHVRSLSQKIEGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSY 209
            AI+ VR LSQ+ +G  DMR  M+SFV KL+FR+MC+VLKEQ+GWRQVRD F WMKLQLSY
Sbjct: 130  AIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSY 189

Query: 210  RPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLS 269
            RPSV+VYTIVLR YGQVGKIK+AEETFLEMLEVG EPD VACGTMLCTYARWG H AML+
Sbjct: 190  RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 249

Query: 270  FYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVVINSLV 329
            FY AV++R I+ S +V+NFMLSSLQKK  H KV +LW++MVE GV  N+FTYT+V++S  
Sbjct: 250  FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 309

Query: 330  KEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNY 389
            K+G  EEA K F EMK+ GFVPEEVTY+ +ISLS+K G+ ++ + LY+DMR + IVPSNY
Sbjct: 310  KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 369

Query: 390  TCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEM 449
            TC+++L+L+YK  +Y KALSLF++ME  K+  DEVI GL+IRIYGKLGL+ DA   FEE 
Sbjct: 370  TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 429

Query: 450  EQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDI 509
            E+L LL DEK+YLAM+QVHL+S N  KAL++IE+MK+R+I LSRFAYIV LQCY   +++
Sbjct: 430  ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNV 489

Query: 510  RSAESTFQALSKTGLPDARSCINILNLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVM 569
              AE  F+ALSKTGLPDA SC ++LNLY +LNL  KAK FI  I  D V FD ELYK  M
Sbjct: 490  DCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAM 549

Query: 570  RVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKLDGGEINENTIVGYDQPDHMA 629
            RVYCKEGM  +A+ LI  M ++    DN+FV+T +    +         ++   Q D MA
Sbjct: 550  RVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMA 609

Query: 630  LDMILRLYLANGDVGKRSKILKLILGKG-GVTIASQLVANLIREGKKMTRDALKAGTLTK 689
            L ++L L L  G++ +   IL L+     G +  ++++++ +REG     D  KA  +  
Sbjct: 610  LGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREG-----DVSKAEMIAD 669

Query: 690  ELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCT-SKLIFGSMIDAYIKCDK 749
             +++L  R+++ TIA+LI++YG++ K+ +A  +  A  +S T  K +  SMIDAY++C  
Sbjct: 670  IIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGW 729

Query: 750  AEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRASLN 809
             E+A+ L+ E  EKG D GAV +S +VN LT            + GKH+ AE++ R  L 
Sbjct: 730  LEDAYGLFMESAEKGCDPGAVTISILVNALT------------NRGKHREAEHISRTCLE 789

Query: 810  CGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDK 869
              +ELDTV +NT IKAMLEAGKL  AS IYE M    +  SIQTYNTMISVYGRG +LDK
Sbjct: 790  KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 849

Query: 870  AVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVN 929
            A+ +F+ AR SGL  DEK YTN+I  YGK GK  EA  LF EM ++G+KPG  SYN+MV 
Sbjct: 850  AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 909

Query: 930  VYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPA 989
            + A + LH E ++L +AME++G   D  TY +LI+ Y +S  ++EA+K I  ++E GIP 
Sbjct: 910  ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPL 969

Query: 990  SCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFF 1049
            S +H+  LLSAL KAGM+ +AER Y K+  AG++PD  C R +++GY+  G  ++GI F+
Sbjct: 970  SHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFY 1029

Query: 1050 ESTCKYA--GDRFIMSAAVHFYKVERKEDE 1076
            E   + +   DRF+ S     YK   KE +
Sbjct: 1030 EKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037

BLAST of Lsi10G002250 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 208.0 bits (528), Expect = 3.9e-53
Identity = 194/826 (23.49%), Postives = 353/826 (42.74%), Query Frame = 0

Query: 211  PSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSF 270
            P V+ YT+++       K+  A+E F +M     +PD V   T+L  ++      ++  F
Sbjct: 291  PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350

Query: 271  YSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVVINSLVK 330
            +S ++  G +P +  F  ++ +L K G   +  +    M + G+  N  TY  +I  L++
Sbjct: 351  WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410

Query: 331  EGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNYT 390
                ++A ++F  M++ G  P   TY + I    K G+S   L  ++ M+ K I P+   
Sbjct: 411  VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470

Query: 391  CSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEME 450
            C++ L    K G   +A  +F  ++   +V D V Y ++++ Y K+G  ++A K   EM 
Sbjct: 471  CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530

Query: 451  QLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDIR 510
            + G   D     ++      +   ++A  +   MK   +  +   Y   L        I+
Sbjct: 531  ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590

Query: 511  SAESTFQALSKTGLPDARSCINIL-NLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVM 570
             A   F+ + + G P      N L +   K + V  A   +  +   G V D   Y  ++
Sbjct: 591  EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650

Query: 571  RVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSFMFKL-------DGGEINENTIVG- 630
                K G  K+A      MKK    V   FV   + +  +       D  +I  N +   
Sbjct: 651  FGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 710

Query: 631  YDQPDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTIASQLVANLIREGKKMTRDAL 690
             DQP ++  + ++   LA   +       + ++  G       ++  +IR   K   +  
Sbjct: 711  ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK-HNNVS 770

Query: 691  KAGTLTKELLK-LDCRLDDATIASLISLYGKEKKINQAAEILAAV-ADSCTSKL-IFGSM 750
             A TL ++  K L  +    T   LI    +   I  A ++   V +  C   +  +  +
Sbjct: 771  GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 830

Query: 751  IDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVA 810
            +DAY K  K +E F LYKE+     +   +  + +++ L   G    ++ D     + + 
Sbjct: 831  LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG----NVDDALDLYYDLM 890

Query: 811  ENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISV 870
             +   +   C        +   I  + ++G+L+ A +++E M+     P+   YN +I+ 
Sbjct: 891  SDRDFSPTAC-------TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 950

Query: 871  YGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPG 930
            +G+  + D A A+F      G+ PD K Y+ L+ C    G+  E    FKE+ E G+ P 
Sbjct: 951  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 1010

Query: 931  MVSYNIMVNVYANAGLHEETEKLFKAMEQD-GFLPDSFTYFSLIRAYTQSCNYSEAKKII 990
            +V YN+++N    +   EE   LF  M+   G  PD +TY SLI     +    EA KI 
Sbjct: 1011 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1070

Query: 991  NSMQENGIPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGLNPD 1024
            N +Q  G+  +   ++ L+   + +G    A  VY  + T G +P+
Sbjct: 1071 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101

BLAST of Lsi10G002250 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-48
Identity = 178/750 (23.73%), Postives = 324/750 (43.20%), Query Frame = 0

Query: 307  MQMVEIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKR 366
            M +   G + N  T   ++   VK     E + V   M+   F P    Y  LI      
Sbjct: 124  MSVAGFGPSVN--TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 183

Query: 367  GNSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIY 426
             +SD +L L++ M++    P+ +  ++L+  F K G    ALSL  EM+S  +  D V+Y
Sbjct: 184  NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 243

Query: 427  GLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKS 486
             + I  +GK+G  + A K F E+E  GL  DE +Y +M  V   +   ++A+ + E ++ 
Sbjct: 244  NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 303

Query: 487  RNIWLSRFAYIVSLQCYVMKEDIRSAESTFQ-ALSKTGLPDARSCINILNLYLKLNLVNK 546
                   +AY   +  Y        A S  +   +K  +P   +   IL    K+  V++
Sbjct: 304  NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 363

Query: 547  AKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVETFSF 606
            A      ++KD    +   Y +++ + C+ G    A  L   M+K  LF +   V T + 
Sbjct: 364  ALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN---VRTVNI 423

Query: 607  MF-KLDGGEINENTIVGYDQPDHMAL--DMILRLYLANGDVGKRSKILKLILGKGGVTIA 666
            M  +L   +  +     +++ D+     D I    L +G            LGK G    
Sbjct: 424  MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG------------LGKVG---- 483

Query: 667  SQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEIL 726
                            DA K   + +++L  DCR +     SLI  +    +     +I 
Sbjct: 484  -------------RVDDAYK---VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 543

Query: 727  A-AVADSCTSKL-IFGSMIDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVG 786
               +  +C+  L +  + +D   K  + E+   +++E+  + +   A + S +++ L   
Sbjct: 544  KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 603

Query: 787  GMLWSHIRDQHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHM 846
            G         ++ K Q            G  LDT A+N  I    + GK++ A ++ E M
Sbjct: 604  GFANETYELFYSMKEQ------------GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 663

Query: 847  IALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKT 906
                  P++ TY ++I    +  +LD+A  +F  A+S  +  +   Y++LI  +GK G+ 
Sbjct: 664  KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 723

Query: 907  HEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSL 966
             EA L+ +E++++G+ P + ++N +++    A    E    F++M++    P+  TY  L
Sbjct: 724  DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 783

Query: 967  IRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKAGMIRKAERVYDKLQTAGL 1026
            I    +   +++A      MQ+ G+  S   Y  ++S LAKAG I +A  ++D+ +  G 
Sbjct: 784  INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 823

Query: 1027 NPDVTCNRNLMRGYLDYGYVKEGIKFFEST 1051
             PD  C   ++ G  +     +    FE T
Sbjct: 844  VPDSACYNAMIEGLSNGNRAMDAFSLFEET 823

BLAST of Lsi10G002250 vs. TAIR 10
Match: AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-46
Identity = 199/929 (21.42%), Postives = 389/929 (41.87%), Query Frame = 0

Query: 177  KLTFREMCIVLKE--QKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRTYGQVGKIKLAEE 236
            ++T  + C V+K   Q+ W++  +VF+W+ L+  + P+  +   +L   G+  +  LA E
Sbjct: 153  QMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVE 212

Query: 237  TFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSMAVFNFMLSS-L 296
             F    E  +         M+  Y+R G          A++ RG +P +  FN ++++ L
Sbjct: 213  IFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 272

Query: 297  QKKGLHAKVKELWMQMV-EIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPE 356
            +  GL   +    + MV   G+  +  TY  ++++  ++ + + A KVF +M+     P+
Sbjct: 273  KSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD 332

Query: 357  EVTYNLLISLSIKRGNSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSLFS 416
              TYN +IS+  + G + E  RL+ ++  K   P   T +SLL  F +  +  K   ++ 
Sbjct: 333  LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 392

Query: 417  EMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQL-GLLTDEKSYLAMAQVHLSS 476
            +M+      DE+ Y  +I +YGK G  + A + +++M+ L G   D  +Y  +      +
Sbjct: 393  QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 452

Query: 477  RNFEKALNIIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSC 536
                +A  ++  M    I  +   Y   +  Y        AE TF  + ++G  PD  + 
Sbjct: 453  NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 512

Query: 537  INILNLYLKLNLVNKAKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKK 596
              +L++ L+ N   KA      +  DG      LY+L++    KE  S D +  I+ M++
Sbjct: 513  SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 572

Query: 597  ----DELFVDNKFVETFSFMFKLDGGEINENTIVGYDQPDHMALDMILRLYLANGDVGKR 656
                + L + +  V+     F L   ++      GY+    +  D +L +  +    G+ 
Sbjct: 573  LCGMNPLEISSVLVK--GECFDLAARQLKVAITNGYE----LENDTLLSILGSYSSSGRH 632

Query: 657  SKILKLILGKGGVTIASQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLI 716
            S+  +L+          + +       K++         +T+ L+ L C+++        
Sbjct: 633  SEAFELL----------EFLKEHASGSKRL---------ITEALIVLHCKVN-------- 692

Query: 717  SLYGKEKKINQAAEILAAVADSCTSKLIFGS--MIDAYIKCDKAEEAFTLYKELVEKGYD 776
                     N +A +    AD C     FGS  M +  + C  A E +            
Sbjct: 693  ---------NLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHY------------ 752

Query: 777  LGAVAVSRIVNTLTVGGMLWSHIRDQHTGKHQVAENVIRAS--LNCGLELDTVAFNTFIK 836
                  S++ + L + G              + +E+V ++   + C L     A     +
Sbjct: 753  ---AEASQVFSDLRLSGC-------------EASESVCKSMVVVYCKLGFPETAHQVVNQ 812

Query: 837  AMLEAGKLHFASRIYEHMIALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSP 896
            A  E    HFA                  Y  +I  YG+ +   KA ++    R SG +P
Sbjct: 813  A--ETKGFHFACS--------------PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 872

Query: 897  DEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLF 956
            D K + +L+S Y + G    A  +F  M+ +G  P + S NI+++     G  EE   + 
Sbjct: 873  DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 932

Query: 957  KAMEQDGFLPDSFTYFSLIRAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLSALAKA 1016
            + ++  GF     +   ++ A+ ++ N  E KKI +SM+  G   +   Y +++  L K 
Sbjct: 933  EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 992

Query: 1017 GMIRKAERVYDKLQTAGLNPDVTCNRNLMRGYLDYGYVKEGIKFFESTCKYAG---DRFI 1076
              +R AE +  +++ A    ++    ++++ Y      K+ ++ ++   K  G   D   
Sbjct: 993  KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQ-RIKETGLEPDETT 993

Query: 1077 MSAAVHFYKVERKEDEALNILDSMKILGI 1089
             +  +  Y  +R+ +E   ++  M+ LG+
Sbjct: 1053 YNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993

BLAST of Lsi10G002250 vs. TAIR 10
Match: AT2G39230.1 (LATERAL ORGAN JUNCTION )

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-45
Identity = 172/756 (22.75%), Postives = 323/756 (42.72%), Query Frame = 0

Query: 243 GLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSMAVFNFMLSSLQKKGLHAKV 302
           G E    A   +L  Y R       +  +  + DR ++P +   N +LSSL +  L  + 
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223

Query: 303 KELWMQMVEIGVTFNDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISL 362
           KE++ +MV IGV  ++ T  +++ + ++E   EEA K+F  + + G  P+ + ++L +  
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283

Query: 363 SIKRGNSDEVLRLYKDMRDKDIVP-SNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVV 422
           + K  +    L L ++MR K  VP S  T +S++  F K G+  +A+ +  EM    + +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343

Query: 423 DEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNII 482
             +    L+  Y K      A   F  ME+ GL  D+  +  M +    +   EKA+   
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403

Query: 483 ELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLN 542
             MKS  I  S       +Q  +  E   +A   F    ++ +     C  I  L+ K  
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463

Query: 543 LVNKAKDFIAHIRKDGVVFDEELYKLVMRVYCKEGMSKDAEILIKLMKKDELFVDNKFVE 602
            V+ A  F+  + + G+  +   Y  +M  +C+      A  +   M +  L  +N    
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN---- 523

Query: 603 TFSFMFKLDGGEINENTIVGYDQPDHMALDMILRLYLANGDVGKRSKILKLILGKGGVTI 662
            F++   +DG   N++        +  A D+I ++  +N +                   
Sbjct: 524 -FTYSILIDGFFKNKD--------EQNAWDVINQMNASNFE------------------- 583

Query: 663 ASQLVANLIREGKKMTRDALKAGTLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEI 722
           A++++ N I  G        KA  + + L+                   KEK+ +     
Sbjct: 584 ANEVIYNTIINGLCKVGQTSKAKEMLQNLI-------------------KEKRYSM---- 643

Query: 723 LAAVADSCTSKLIFGSMIDAYIKCDKAEEAFTLYKELVEKGYDLGAVAVSRIVNTLTVGG 782
                 SCTS   + S+ID ++K    + A   Y+E+ E G     V  + ++N     G
Sbjct: 644 ------SCTS---YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN-----G 703

Query: 783 MLWSHIRDQHTGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMI 842
              S+  D       +A  +     +  L+LD  A+   I    +   +  A  ++  + 
Sbjct: 704 FCKSNRMD-------LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 763

Query: 843 ALDIVPSIQTYNTMISVYGRGRKLDKAVAMFNAARSSGLSPDEKAYTNLISCYGKAGKTH 902
            L ++P++  YN++IS +    K+D A+ ++    + G+S D   YT +I    K G  +
Sbjct: 764 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 823

Query: 903 EASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLPDSFTYFSLI 962
            AS L+ E+L+ G+ P  + + ++VN  +  G   +  K+ + M++    P+   Y ++I
Sbjct: 824 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 843

Query: 963 RAYTQSCNYSEAKKIINSMQENGIPASCAHYDLLLS 998
             + +  N +EA ++ + M E GI      ++LL+S
Sbjct: 884 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O046470.0e+0054.48Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana OX... [more]
Q9SZ525.5e-5223.49Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
Q9M9073.1e-4723.73Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... [more]
Q5G1S88.5e-4521.42Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop... [more]
O809581.4e-4422.75Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KE220.0e+0091.66PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G118350 PE... [more]
A0A1S3CJB80.0e+0091.75LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 OS=Cu... [more]
A0A5A7THY40.0e+0087.96Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BQE20.0e+0089.71Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1D3B20.0e+0088.15pentatricopeptide repeat-containing protein At5g27270 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
XP_038900459.10.0e+0093.98pentatricopeptide repeat-containing protein At5g27270 [Benincasa hispida][more]
XP_004140061.10.0e+0091.66pentatricopeptide repeat-containing protein At5g27270 [Cucumis sativus] >KGN4665... [more]
XP_008462786.10.0e+0091.75PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... [more]
KAA0042408.10.0e+0087.96pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
TYK00992.10.0e+0089.71pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT5G27270.10.0e+0054.48Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G31850.13.9e-5323.49proton gradient regulation 3 [more]
AT3G06920.12.2e-4823.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G18110.16.0e-4621.42Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G39230.11.0e-4522.75LATERAL ORGAN JUNCTION [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 847..892
e-value: 9.7E-9
score: 35.3
coord: 917..964
e-value: 4.8E-10
score: 39.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 460..489
e-value: 0.42
score: 11.0
coord: 565..591
e-value: 0.0048
score: 17.1
coord: 735..762
e-value: 5.2E-5
score: 23.2
coord: 992..1019
e-value: 0.0066
score: 16.6
coord: 815..843
e-value: 1.0
score: 9.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 424..455
e-value: 1.1E-4
score: 20.2
coord: 319..351
e-value: 7.3E-10
score: 36.4
coord: 920..954
e-value: 1.7E-7
score: 28.9
coord: 851..884
e-value: 3.3E-8
score: 31.2
coord: 389..423
e-value: 3.5E-6
score: 24.8
coord: 815..848
e-value: 5.2E-4
score: 18.0
coord: 354..387
e-value: 2.6E-6
score: 25.3
coord: 956..988
e-value: 9.0E-5
score: 20.4
coord: 992..1024
e-value: 7.8E-6
score: 23.7
coord: 214..248
e-value: 5.4E-6
score: 24.2
coord: 735..763
e-value: 0.0012
score: 16.9
coord: 886..917
e-value: 2.1E-8
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 210..246
e-value: 8.0E-4
score: 19.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 561..595
score: 8.867749
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 247..281
score: 8.758137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 813..847
score: 9.97484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 422..456
score: 10.720209
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 12.879585
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 731..765
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 953..987
score: 10.676364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 848..882
score: 11.432693
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 883..917
score: 12.890547
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 918..952
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 10.676364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 988..1022
score: 10.358486
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 968..1093
e-value: 3.5E-16
score: 61.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 368..520
e-value: 6.0E-31
score: 109.9
coord: 623..786
e-value: 4.2E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 860..967
e-value: 2.5E-30
score: 107.2
coord: 300..367
e-value: 2.4E-16
score: 61.6
coord: 787..859
e-value: 8.4E-10
score: 40.3
coord: 146..299
e-value: 2.8E-25
score: 90.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 521..593
e-value: 2.9E-6
score: 28.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 423..1014
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 303..437
e-value: 1.5E-12
score: 47.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..94
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 517..1100
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 59..420
coord: 424..524
NoneNo IPR availablePANTHERPTHR47942:SF60PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 517..1100
NoneNo IPR availablePANTHERPTHR47942:SF60PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 59..420
coord: 424..524
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 364..549

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G002250.1Lsi10G002250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0000373 Group II intron splicing
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding