
Lsi10G002180 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACAAGGTTTGGGTGTTTGAGAAAAGCACGTGCTCATGAAAAAAACCTTATTTTAAATCAGATCCCCATTTTGGTTATCTTACAACAAACAAAGCTTTAGTTTGTAGATAGGGTCACCATTAAGTCGCTTCAAAGCTATAGGCGCATCGGTTAGACTACTCTCGAAGCTACAGATGCATTGGGAGGTATTGTCATCATTTGGAATGACTCTTCTCACTTCAAGGGAGGTCATTAAAAGGTGTTTTGTCTCTTACCATTTACTTTTCCCTTGCTGACCGTTTCTTTCTCTTGTTGTCCAACATCTATAGTTCATCTTGCTCCAAGGATTTGGTTGGAACTCAAAAATTTACAATCTCTTTGTTCTGAATTTTAGCTTCATGCTGGTGATATTAATGTCTCCTGCTAGCCTTTTGAAAAGTCTTGTGGCAAGCCCTAAACGTCCGATATGAAGCATTTTAACGGATTCATAAATTTGACTGGTCTCGTTGATGTGCCCCTTCAAAATGGCCTCTAAACATGGTCTAGTCATAGGCAGTACCCCAATTTCACCCTCACTGACAGATTTTTGCTCACGAAAATTGTCCTACATAAATTTGGTTTCTCTATAGCAAAGAGGATTGCAAGACCCACTTCTAACCATTACTCCATTCTTCTTTCCGTTAGGGGTGTTCCCTTTTGTTTTGAGAATATGTGGGTTCAGTTTGATGATACCTTGCCTATGATTGAGTATTAG ATGTACAAGATAGGGTCACCATTAAGTCGCTTCAAAGCTATAGGCGCATCGGTTAGACTACTCTCGAAGCTACAGATGCATTGGGAGGTATTGTCATCATTTGGAATGACTCTTCTCACTTCAAGGGAGTACCCCAATTTCACCCTCACTGACAGATTTTTGCTCACGAAAATTGTCCTACATAAATTTGGTTTCTCTATAGCAAAGAGGATTGCAAGACCCACTTCTAACCATTACTCCATTCTTCTTTCCGTTAGGGGTGTTCCCTTTTGTTTTGAGAATATGTGGGTTCAGTTTGATGATACCTTGCCTATGATTGAGTATTAG ATGTACAAGATAGGGTCACCATTAAGTCGCTTCAAAGCTATAGGCGCATCGGTTAGACTACTCTCGAAGCTACAGATGCATTGGGAGGTATTGTCATCATTTGGAATGACTCTTCTCACTTCAAGGGAGTACCCCAATTTCACCCTCACTGACAGATTTTTGCTCACGAAAATTGTCCTACATAAATTTGGTTTCTCTATAGCAAAGAGGATTGCAAGACCCACTTCTAACCATTACTCCATTCTTCTTTCCGTTAGGGGTGTTCCCTTTTGTTTTGAGAATATGTGGGTTCAGTTTGATGATACCTTGCCTATGATTGAGTATTAG MYKIGSPLSRFKAIGASVRLLSKLQMHWEVLSSFGMTLLTSREYPNFTLTDRFLLTKIVLHKFGFSIAKRIARPTSNHYSILLSVRGVPFCFENMWVQFDDTLPMIEY Homology
BLAST of Lsi10G002180 vs. ExPASy TrEMBL
Match: A0A438DEH5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_082947 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Lsi10G002180 vs. ExPASy TrEMBL
Match: A0A438F0G1 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_1 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04 Identity = 36/103 (34.95%), Postives = 54/103 (52.43%), Query Frame = 0
BLAST of Lsi10G002180 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04 Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of Lsi10G002180 vs. ExPASy TrEMBL
Match: A0A438IPD5 (SAM_MT_RSMB_NOP domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_032125 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.2e-04 Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of Lsi10G002180 vs. NCBI nr
Match: KAE8648878.1 (hypothetical protein Csa_007793, partial [Cucumis sativus]) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05 Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Lsi10G002180 vs. NCBI nr
Match: RVW33883.1 (hypothetical protein CK203_082947 [Vitis vinifera]) HSP 1 Score: 54.3 bits (129), Expect = 7.6e-04 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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