Lsi10G002120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G002120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	binding partner of ACD11 1-like
Location	chr10: 3477849 .. 3482226 (-)
RNA-Seq Expression	Lsi10G002120
Synteny	Lsi10G002120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAAGTGAAGTTTCCTGACATTACTAATTTTCCTGCTCTTTATCTCTCCCACGCTTTGTCTGGTGATACTCCCTTCTTTCAAATTGCTTCCAAGCTCCAACCTCTACAACTTCCTCTTTCTCCAAGAAATTCGTCGAATTCTTCGATCATTAGCTATGCAGGTAACAAATCCCTCAATTTCCACTTCTTTCTTTCAACTTTTGCTCTCTGATTTCCGTAATCAACTTCAAATTTTCCTTGTTTTTTCATCTTCATTTCTTCTGTTCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGAGTTCTTCTCCTTCTCTGGAGAAATTGAGCATATAGAGATTCAATGGTAGGTGATTAACTCTCTGTTCCTGTAAACAGAGTTTCAAAAAGTGGTAAAAGAGAAGATGTGCGTGATTGATTGATTAATTATGATTCTCTTTTCTATGCTGCTGATTTAGTTTTAGGTTTCTTATTGTTTGGCTTCCGAGGGAAAGTAGTTAGCAATTAAGCATGCGAGTTTTGTGGATTTCTCTTTATTTTTCTTTTTGATTCTTGTTTTTCTTTATCAATAATAAGTGTGAGGGTTGTAATTGTTATAGCTGACAAGTAATTAAGATTGACAAGTAATTAAGATTGTTATTCTAATTTTTTTCTTGTTGCTGCAGTGAACAAGGGGAATCCAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGTATTTCATTATCTCGATTCTCTTTCATTTTCACGAAGTCAGTTATTGGGATGTGTTTGTTGAACTTGTGGTCTTACAATGAATGTCAAAGAGCGTCATGTTGAAGTTTGGTTCATGTGGGTCTACATTTGGCTGTGTTTACCTTCTTATTTAAGCCATTTGATTTGTTAGTGTCTAGTTAGTTCTATAGCCTCTTTACTTTTATTTCCTTCATTTTCGTGCCATTAGTTTTGATTGAATTGAAAAGTGAAGGATGAGTAGAATCTCGGTTTATTTTATTTTATTTTTTTTAATGAAAATACTTTTTCTTCATAAGAAGATTTTTCTACACGTAATCTCAAACATACAGGAGAAATTTCTTTAGAGCTGTCATATACGATCTTTTAGTTGAAGCTACCCTGCTTTTGCATTTTGTATTTCTCATCACCACCCCACTCTTTCTAATAAAATAATACTAATATTAAATCATAGATTAGTTATCAAACTAATGTTAAAAGTGGCATGCTCTGGGATAGTTCTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTGTGAAGAAAGAAAGAAAGAAGAAGAAGAAGAAGAAGATGATGAGAGTTGAGTAATGGTTGAAACTTGAAAGTGAAAACTATTAAACTGAACTTTATGAATAAACATCTGCCTTGCTTTTACTTTTTGTTACGAATAAAAGCATTAGTGAGAATTACTAAATGGACATGTTTCTAGAAAAAGAAGGAAGCTAATACCTTTTCTTTGCATGATCATTTCTTTATGCAATAGTGGAATTATTTGATATTTTCATCACGCAATACTGGAAATATACCTTTTCTTCTTCATATCTGGCTGATGCCATAAGCTACTATAAACAATTTCTATTGTTTATTTGTTTGTTATTTAGGGAGCAACTATTGTAGATCAGATCGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGTATTATTCTTGTGTTTGAATATTTTTCCAGGCCCGTCTAGCTTATTATATATTCAATATTTTAAATTTTCTATGTTTGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGTAAATGTGTTGACCTCAATCTATGAATATCAAGTATTTGTGTAGCATATTCTTTCACGTTGATCTACTATTTAAAGAAAAACCAAGGCGGGGGAGTTTCATCAAATGGGAAAGTTTAGGACATGTTTCATGTTTTCTGTATTTAGATTTTCTTAAATTGATGTAGATGGATGATAAGTAAAACCTCAATTGAATGCATGTCGTCATGGACCTCACTACACTTGCTAAAACCATGGTGAAGAACTGGTGAAACAGTTTCACACTTTTAGTTTTCATGTGGATCTTCATTTCCGTGATTTGTGCACCTTTTCTTTTTTTCCCACCTTAAATCTTTTTGTGTTTATAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTAGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTAACAGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAACTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGTTCTGCTGTCAAAACAAGCAAGTATGAATCATCCTTCTTGAGGAAACATACGTTGCCATTTTTATTTGCACTGCTCTATTTTGTTAGCTTATCCCCTAAGAAATTTTTACTTCCCTTCTGCTATCTTCAAATTTTAGAACTTGAATATTCTCCACTCCTAGCAAGAAAGCAGAAAATTAGATTTCTAGAATAGCTCCCAAACAACTCCCTAGTGTTTCAACTTCTTGAGAACTTTAGATCATCGTATATTTCTTTTATCCCAAATAAATTACAAATGGATCTACTATTCGTTCAGAATAAATCAGTTATGACAATAGACGGAAGTGAATTAATTGAATTGTTTCACTCCATCTTGGCGTTGAACAGGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAAGTCGCAAAAGCAGGGCAGGCAGCAGGTACGAAAACCAGAGAGAAGTTCAATTTGGCTATGTCAAACTTAGTTTCAAAGGTGCGTTTATGAAACCCTTTTATTTAAGTCAGAATTCTTCGAAAATCGCTTTGCTGTGAGTAACTTAAGGACAAGCTTAGGAACAACAGTTTTGATGAATTAGTTCTCAAATATATTTTTCTAGTCTTTTGTTTTATGCATTAGCCAAAACCATGCCAAAAGAAGAGAAAGCTCCCTAA

mRNA sequence

TGGAAAGTGAAGTTTCCTGACATTACTAATTTTCCTGCTCTTTATCTCTCCCACGCTTTGTCTGGTGATACTCCCTTCTTTCAAATTGCTTCCAAGCTCCAACCTCTACAACTTCCTCTTTCTCCAAGAAATTCGTCGAATTCTTCGATCATTAGCTATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGATGAACAAGGGGAATCCAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACTATTGTAGATCAGATCGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTAGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTAACAGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAACTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGTTCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAAGTCGCAAAAGCAGGGCAGGCAGCAGCCAAAACCATGCCAAAAGAAGAGAAAGCTCCCTAA

Coding sequence (CDS)

ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGGATCTAGCTACTGAGAGGGAGATTCACGATGAACAAGGGGAATCCAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGAGCAACTATTGTAGATCAGATCGTGAGCATATCTCCTGCTGAAAATCATGTACCAAGAAGAGAAATGCAGGAAGTACGGGTTGTGGACAATGCTGCATGTCTCACGCCTACAGAAAATAATTTTCCTAGCATTGAGGATTCTGCGAGCCAGCCTAGCAGTGGAAAAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAACTGTGCTAGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCAAAAGCATTTGACGAAAAACATCGGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAGGGTTGGGCTCACAGAGAAATTAACAGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAACTTCACGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAACTCAATGATACAGGTTCTGCTGTCAAAACAAGCAAGTATGTGACAGCAGGAGCTGCTTGGCTAAATGGTGCTTTTGGCAAAGTCGCAAAAGCAGGGCAGGCAGCAGCCAAAACCATGCCAAAAGAAGAGAAAGCTCCCTAA

Protein sequence

MQSQTRTVQVKHVSDLATEREIHDEQGESKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQAAAKTMPKEEKAP

Homology

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BLAST of Lsi10G002120 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.8e-38
Identity = 100/253 (39.53%), Postives = 150/253 (59.29%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLL 60
           M SQ R+V+V ++S  ATE +I             D Q    +A+VTF++ +  E A+LL
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLL 60

Query: 61  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 120
           SGA+I DQ V I  A N+ P                       P+   + +Q S  +  V
Sbjct: 61  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 120

Query: 121 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIS 180
            +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S
Sbjct: 121 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 180

Query: 181 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK- 240
           +VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+ 
Sbjct: 181 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 230

[Close]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL
Match: A0A0A0LNE8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.8e-110
Identity = 227/254 (89.37%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL
Match: A0A5D3BPG7 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001350 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.2e-109
Identity = 225/254 (88.58%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL
Match: A0A1S3CIA3 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.2e-109
Identity = 225/254 (88.58%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL
Match: A0A6J1IKN1 (binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 221/254 (87.01%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIH+               EQG+SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTENNFPSIEDSASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL
Match: A0A6J1GFF4 (binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 221/254 (87.01%), Postives = 232/254 (91.34%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQ ++VSDLATEREIH+               EQG+SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVDQIVSISPAEN+VPRREMQEVR VDNAA LTPTENNFPSIEDSASQPSSG+
Sbjct: 61  LLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIEDSASQPSSGR 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDR+VGLTEKLTV
Sbjct: 121 MYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKV 240

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BLAST of Lsi10G002120 vs. NCBI nr
Match: XP_038881171.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 6.1e-110
Identity = 228/254 (89.76%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQG+SKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGQSKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVDQIVSIS AENHVPRREMQEVRVVDNAACLTPTENNFPS EDSASQPSSGK
Sbjct: 61  LLLSGATIVDQIVSISLAENHVPRREMQEVRVVDNAACLTPTENNFPSTEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQ VVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQVVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQ LHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQNLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. NCBI nr
Match: XP_004151849.1 (binding partner of ACD11 1 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 7.9e-110
Identity = 227/254 (89.37%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. NCBI nr
Match: KAE8652335.1 (hypothetical protein Csa_022102 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 1.8e-109
Identity = 226/254 (88.98%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           +QSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 147 LQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 206

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRREMQEVRV DNAACLTPTENN PSIEDSASQPSSGK
Sbjct: 207 LLLSGATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGK 266

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 267 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 326

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 327 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 386

[Close]

BLAST of Lsi10G002120 vs. NCBI nr
Match: XP_008462804.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa] >TYK00958.1 binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 225/254 (88.58%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTF DPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVD+IVSI+PAENHVPRRE+QEVRV DNAACLTPTENN PS EDSASQPSSGK
Sbjct: 61  LLLSGATIVDKIVSITPAENHVPRREIQEVRVADNAACLTPTENNSPSREDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKH+LTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 239
           GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTA AAWLNGAFGKV
Sbjct: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. NCBI nr
Match: XP_038902413.1 (binding partner of ACD11 1-like [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 220/240 (91.67%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSDLATEREIH+               EQGESKTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGK 120
           LLLSGATIVDQIVSI+PAENHVPRREMQEVRVVDNAACLTPTEN+ PSIEDSASQPSSGK
Sbjct: 61  LLLSGATIVDQIVSITPAENHVPRREMQEVRVVDNAACLTPTENSSPSIEDSASQPSSGK 120

Query: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180
           MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV
Sbjct: 121 MYVNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTV 180

Query: 181 GISVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 226
           GIS VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV
Sbjct: 181 GISAVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKV 240

[Close]

BLAST of Lsi10G002120 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 294.3 bits (752), Expect = 9.1e-80
Identity = 170/250 (68.00%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 5   TRTVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLS 64
           TR+VQV +VSDLATEREIH+               E G+S+ AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVN 124
           GATIVDQIV+I+ AEN+V RRE QEVR++DNA  L   E+   + +   +   + + YV+
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQES---TTQTKTNMDGNSRAYVS 123

Query: 125 RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISV 184
           +AQ+VVATVLAKGSA+GQDA+NKAKAFDEKH+L A+ASAKV SFD+RVGLTEKL+VGIS 
Sbjct: 124 KAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISA 183

Query: 185 VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAG 239
           VNEKVKSVDQKL VSDKTMAAIFAAERKLNDTGSAVK+S+YVTAGAAW +GAF KVA+ G
Sbjct: 184 VNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVG 243

[Close]

BLAST of Lsi10G002120 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-41
Identity = 102/239 (42.68%), Postives = 149/239 (62.34%), Query Frame = 0


Query: 7   TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT+R++ +               E   +K A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNRA 126
           TIVD  V +S A ++    E          A L P        +DS   P +G   + +A
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEA--------LASLEP--------KDSNKSPKAGDSVLRKA 124

Query: 127 QEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVN 186
           ++VV+++LAKG  +G+DA+ KAK+ DEKH+LT++ASAKV SFD+++G T+K+  G  VV 
Sbjct: 125 EDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVG 184

Query: 187 EKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ 231
           EKV+ VDQK  VS+KT +AI AAE+ +++ GSA+  ++YV  GA W+ GAF KVAKA +
Sbjct: 185 EKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAE 227

[Close]

BLAST of Lsi10G002120 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-39
Identity = 100/253 (39.53%), Postives = 150/253 (59.29%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIH------------DEQGESKTAFVTFRDPKALEIALLL 60
           M SQ R+V+V ++S  ATE +I             D Q    +A+VTF++ +  E A+LL
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSNEHSAYVTFKETQGAETAVLL 60

Query: 61  SGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYV 120
           SGA+I DQ V I  A N+ P                       P+   + +Q S  +  V
Sbjct: 61  SGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESVV 120

Query: 121 NRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIS 180
            +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G S
Sbjct: 121 QKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTS 180

Query: 181 VVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK- 240
           +VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+ 
Sbjct: 181 LVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQA 230

[Close]

BLAST of Lsi10G002120 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 98/254 (38.58%), Postives = 150/254 (59.06%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSDLATEREIHD-------------EQGESKTAFVTFRDPKALEIALL 60
           M SQ R+V+V ++S  ATE +I +             +     +A+VTF++ +  E A+L
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHSAYVTFKETQGAETAVL 60

Query: 61  LSGATIVDQIVSISPAENHVPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMY 120
           LSGA+I DQ V I  A N+ P                       P+   + +Q S  +  
Sbjct: 61  LSGASIADQSVIIELAPNYSP-----------------------PAAPHAETQSSGAESV 120

Query: 121 VNRAQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGI 180
           V +A++VV+++LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+++GL++KLT G 
Sbjct: 121 VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGT 180

Query: 181 SVVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAK 240
           S+VNEK+K+VDQ   V+++T +   AAE+ ++  GSAV  ++YV  G +W  GAF +VA+
Sbjct: 181 SLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQ 231

[Close]

BLAST of Lsi10G002120 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-38
Identity = 93/240 (38.75%), Postives = 154/240 (64.17%), Query Frame = 0


Query: 7   TVQVKHVSDLATEREIHD---------------EQGESKTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  ATER++ +               E   SK A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQIVSISPAENH-VPRREMQEVRVVDNAACLTPTENNFPSIEDSASQPSSGKMYVNR 126
           TIVD  V+++ + ++ +P   +  +  +  +      +++ P+ ED +           +
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKES-----NKSSSPTREDVS--------VFRK 124

Query: 127 AQEVVATVLAKGSAIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVV 186
           A++VV+ +++KG  +G+DA+ KAK+ DEKH+LT++ASA+V SFD+R+G TEK+  G +VV
Sbjct: 125 AEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVV 184

Query: 187 NEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTAGAAWLNGAFGKVAKAGQ 231
           +EKVK VDQK  V++KT +AI AAE+ +++ GSA+  ++YV  GA W+ GAF +V+KA +
Sbjct: 185 SEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAE 231

The following BLAST results are available for this feature:

BLAST of Lsi10G002120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	3.8e-38	39.53	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of Lsi10G002120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNE8	3.8e-110	89.37	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G431170 PE=4 SV...	[more]
A0A5D3BPG7	7.2e-109	88.58	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CIA3	7.2e-109	88.58	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103501087 PE=4 SV=...	[more]
A0A6J1IKN1	1.8e-107	87.01	binding partner of ACD11 1 OS=Cucurbita maxima OX=3661 GN=LOC111478298 PE=4 SV=1	[more]
A0A6J1GFF4	1.8e-107	87.01	binding partner of ACD11 1 OS=Cucurbita moschata OX=3662 GN=LOC111453443 PE=4 SV...	[more]

BLAST of Lsi10G002120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881171.1	6.1e-110	89.76	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_004151849.1	7.9e-110	89.37	binding partner of ACD11 1 [Cucumis sativus]	[more]
KAE8652335.1	1.8e-109	88.98	hypothetical protein Csa_022102 [Cucumis sativus]	[more]
XP_008462804.1	1.5e-108	88.58	PREDICTED: binding partner of ACD11 1-like [Cucumis melo] >KAA0066322.1 binding ...	[more]
XP_038902413.1	2.0e-108	91.67	binding partner of ACD11 1-like [Benincasa hispida]	[more]

BLAST of Lsi10G002120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	9.1e-80	68.00	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	3.7e-41	42.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.1	2.7e-39	39.53	binding partner of acd11 1	[more]
AT5G16840.2	1.0e-38	38.58	binding partner of acd11 1	[more]
AT5G46870.1	3.0e-38	38.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 3..234
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 3..234
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G002120.1	Lsi10G002120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding