Lsi10G002090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAAAAAAAAGTTTGAATGAGACGTCCAAGGTCCAAGGCATGTGAGGCTTGTACTTTGCAAAATTACTCATCAAATTGGATCTTGTGCCTAACCTGGCTGCTTCTCTCTGTCTCTCGTTTCCTTTCCCATACTTCCTTTTCAAGAAAGAACGTGAAACGAAATGCAGATCGTCCCTAAATATCTCTCTGACCCATCTCACAAACACTCCAAACAAGTTCATCTTTGTCTTATCAACGCTCCCAATCCAGATTCTTCCCACTCCTCATCTCCCATTTCTCAAAAATCTGAAGCTGCCCCAATTCACAATTCAACCCATTTTCCCTCTCTCTGTACTGACCGAACTGTGTTTCCACTGCCAATCATCAGCTTCTACCTTCTCTCCCTGTCTTTCTAACGAATCAATTGCAGTTGGGTCTGTCAGAAATCTGAGCTTAGCGCGATGTTAATGGCGGTTAAGCCCCCATTGGCTTCAAATGGGGCAATAGCTCCTTTACGACAAAACCCACTTGCGTTTTACTCGGCTTCGATTCCTTTGAAGCCCATTTCCCTCTCTTTGCCTTTGAATAACTCAAATCCAAACAATTGCTTTTGTTTGAAGCAGGTGCTGCCACACAGTTCTCGATTAAACTTGCCTCACCGCCGTTTCACTCCGGTCGCCGCCGTGGACTCCGATGTCCCCCAGTCACATCACCAGGTTGCTGTCGTATCTTCTTCCTCGTTTTCACTCTTCAATGCTTCATTCGGGATTTGTTTCCTGTTTAAAATCTCATCAATACTAGAACAATAGGAAAATTTTTCTATAGAATGATCGATCAAGTTTAGAATCTCCAATTTGTGAAACAACTACACGGCTTGCGAATTTCCAAGCTGGGAATGGAAATGCTATCATTCTCTTTCTGATGTCAAATGTGTTGTGTTGTTGAATAAGTGGAAGAACAAGATATTAGGTTTCTCGCTGTTGAGTTGGTTTGCAATTTTTAAATGCTAACTTCATCTGTTATCATGGTCATTAATTTCAATAGCAATATGAAATAATGGTGTGTAATTTGGGCCTTGTATCTTACACTAAAACAATCATGTTTTGGAATGATCCAGCAGATCCTGCTTATTATATGTGTGTACTGATGTTCTCTTTTTAAACTGTGAAAGGGATCTGACACTTTAAGGGACAGCAAAGGGTTTGAGGAGTGGAATTCGTTAACAGCAAAGTTCTCCGGAGCAGCAAATATTCCTTTTATGTTGTTGCAATTGCCTCAGATTATCCTTAATGCTCGAAATCTATTAGCTGGAAACAAAACTGCGCTTTTGGCTGTTCCATGGCTGGTAAGAAGTGTTTCCATTCAAAGTTTAATGGTATGTTTGAGAGTGATTTTGAAATGGTTAAAATCATTTTTGTCAATTCCAAAATCTATCGAAAACATAATTTTAATTATTCAAAATCACATTTGATAGTATGAAATTCATGTTTAATTTGTAAAATCAAATATTAAATAAATCCTAATTGATTAAAGACATGCTTTAGAGTGATTTTGAAAATGACAAAAGTAGTTTTAACCATTTCAAAAGGACTCCTAAGCAAATCCTAAGCTGTTTATTCGAGAATGAAGAACATTTACAATAAATTGTTGAGTCATGTGCATTAATATTTAGTGTTTTCAATATAATTCGAGTTCTCCGGAACTGAAAGAGAAGTATTCCCTGTCTCTTTCACTTTCCAATTTCATTTATTTCTAATCCACGAAGTGCCAAGGTATTGGACTTCAAAGAGTTAATTTATACATGTAGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCACTGCTATCCTACTTTGCAAAGAAGAGGGAGAAGGAGGCCATGGTGATTCAAACATTAGGAGCAGTTACCACATATATAGTTTTTGCCCAGCTTGCAATAGCAGGGGCCATGCCCCTGCCTTACTTTGCAGCCACGTCGGCTGTTGTGGCTTCTGGTCTTCTTATAAACTTTATGAATTACTTTAATGTTCTTCCTGTACAAATTTTGAAATTTTGGGAAGACTTCATCACTGTTGGTGGATTTTCTATCCTCCCCCAGGTAATCTCTCTTCTAGCCCCAGCTTCATTCAAGAGACGATAACATTTATAGTAAAATTTGTCTCAAGGAGATGGAATTTTGGTTTTGCAATGTTTTCGTGCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAGTAACCGCTTTGGTCGCAGCGCTGCTAGCAGTTGCTTTGGTAAATTTTTGCTTGCCTATATTATGTTTTTTTCTTGCATTTGCTAATCCATTTAATGAAACATGTCAGCACAGAAATCTCATGTTTTTAAGGATCGAGCATCTCCATCAATAATGATGTTGCAAAAATTGGACCAAATGGATGGTCATACTCTCTGTTTAGGCAAAATTCTTCTGGACAATGACTTTTCTTACATGTATACGGTTATTAAATGGAATAGTGTGAAATTGAGATCTGAAACCAAGATTACTGTCTTTCCTCATCGTGTTGCTAAAAATGTTATTGCTCCAATCTAGTTCAACGTCCCTTAAAAGTGTCCTTGTATGATTTACAGGCACGAGCAGGAAAACTTCCTGAGAAAGGTGTGAAATTTGTTGGAGCATTATCAGGATGGACAGCAACCCTTCTCTTTATGTGGATGCCAGTTTCGCAATTGGTATTTGTCCGGTTTGAACTTTTAGTATGATAAAAATATATACCTGCATCTTTATTTTACCACTAACTATCATATGCTGTTTGTTCAGTGGACTAATTATCTGAATCCTGAGAACATTAAAGGCTTATCAGCTCTCACAATGCTTCTTGCCCTGATTGGAAATGGTCTTGTGCTTCCACGAGCATTGTTTATACGGGACTTCATGTGGTAAAGCCATTCCCCGCCCGATCAAAACTTTCATGTCTGTTTTCTGATCATTATTTTGTTTTCAATCAACTTGAATGTCACAATAGGTAGGATGTTAAAGTTATGATGCGTTCAGAATGGCTTTGAGAAGCACAGGGAGTCTCCTTGAGAAACTTCCAGACTACATCCATAACTTTTTCTTTTTAAATAAATGCAAATAGGTCAAATCATAAATTTAGTCCTTGAACTTTGTTAGTTGTGTCTGTTTCGATCACTTTTAAAAGTGTACACTTCATAGTCACAGCGATTGCAGAGTATATGACAGTGTAACAGCCTTCATTACCGTATTGTTAATACTCGTTACAACCGAAATTGCAGGTTCTTGGGTTCAGGTTGGGCAATTTTGTTTTATGGATATGCTAACATTGTATGCTTGTACTGGTAAGCTGCCGTTATTTGGATGAATCAGCATTTTTGTTGCCTTAGTATTAGTTAAGTAAATGTGTTCATGGATCCCACAGTTGCAATGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTATTCTCCTGGATAGGTTCTTCTCTTATCTCAATTCATTTTTTCCTTCCATATGTTTCTCTTTCTGCACAAATTGCCACCTGAGACAGCAGATTTATATTGTTTGGTTGCAAAAGAAACAATGACTTTCTGATTAAAGAAATACATATTGTTACTTGTTTCCATGTTATATATGAACGAACTAATAAATAAAAGTTTTACTTGAAAAATGTTTTTTTTAAAAAAAAAAAAGATAAATAGATTATTCAAAATTATCTTGTCATTTTTATTTTCTTTTTAGTATTGATTATGAGTTTTACAAGTAAAAAATGATAATACAATATTTTTATTTGTGTTTTCAGACGTTGGAAAGGTAAAATATAAACTAGATTTTCTGTCATGGGGAATAATTACTACGGCCTTGTTTGGTAATGATTTAGTTTTTAGTTTTTTTATTTTTGAAACTTATACTTGTTTTATCCTAAATTCTATACTATAGTTCTAATATTTCTTGAAAAAATACTTGAATTCTTGGTCAAATTCTGAAAAACAAAGGCAAATTTTTTAAAACTACTTTTTTTAGTTTTTAAAATTTGGCTTAGTTTTTAAAAAGACTAGTGGGAAGTGGATAACAAAAGAAAGAAACTTATAGGTGAAGTAATGTTTATAAGCTTAGTTTTCAAAAACCCTAAACCAAAAACCAAATGGTTACCAAATGCCTCTACATTTTTAGTAAAAAAAGAAATGAAAGCTCTGTTTGATAATCATTTGGGCCCCATTTGGTAACTATTTTGTTTTTGGATTTTGGTTTCTGAAAATTAAGCCTATCTCCTCTCATTTCTTACCATAGTTTATACCAATCTTGAGTATGAGAGTTGAATTCTTAGCCAGATTTCAAAAACAAAAACAAGTTTTTAAAAACTTACTTTTTTTAGTTTTAAAAAAATTGGCTTGAGTTTTTGAAAACATGGGTAAAAAGTAGATATCAAAGCAAGAAATTTAGAGGTGGAAGCGGTATTTATAGGCTTAATTTTCAAAAACTAAAAACCAAAAACAAAATGGTTATCAAACGGGGCCTTGGTTTTTTGAAAATTAAGCTTATAAACACTACTTTCACATATTTCTTTGTTTTGTTATCTATCTTTTAGGAGATTTTAAAGTCCAAGCCTAAGTTTTGAAAACGAAAAAAAATGTAGCTTTTAAAAAGTAGTTTTCATTTTTGGAATTTGACTAAGAATTCAAGTGTTTAGTTAGGAATGATGAAAACTACGGTAAACAAGTGGTGAGAAAACAAGCATAATTTTCATAAACCAAAAGCCAGAACCAAATGGTTATCAAACGGAGTCCTAAATTTACAAAGTGAAATTTGCAAAACATGAATGTTATCGTATCAAATGACCCTCTAGATATCTGATATTGCTGTGGAAGGGGAAAAAAAAGAGGGCATGAAAGTAGTAAGTGAGGAACATGATTGTTCCTGGAGATATCTAATGCTTGCTAATTCTTGTAGGCTTTTTCTTCTGGAGAGACTCTGTGGTATATGGATTCAACTCACCTCTAACATCTCTTAAGGAGCTACTTTTTGGATCCTGACTGCCAAATTCTAGCTTCAAGAAAAAGCCAGATTTCAAGCTGCTTTGACACAAATGCAGCAGCAGCAGCAACTGAAGTCTCAACTGCTTTTTCTCAATGGCTGCAATTGGGAAACAGTGGTTGAAATTTTAGCTCAAGCAAGAAGAATTTTGAAGAGGGAAAAAAACCAATCTAAGCAAC GGGAAAAAAAAAGTTTGAATGAGACGTCCAAGGTCCAAGGCATGTGAGGCTTGTACTTTGCAAAATTACTCATCAAATTGGATCTTGTGCCTAACCTGGCTGCTTCTCTCTGTCTCTCGTTTCCTTTCCCATACTTCCTTTTCAAGAAAGAACGTGAAACGAAATGCAGATCGTCCCTAAATATCTCTCTGACCCATCTCACAAACACTCCAAACAAGTTCATCTTTGTCTTATCAACGCTCCCAATCCAGATTCTTCCCACTCCTCATCTCCCATTTCTCAAAAATCTGAAGCTGCCCCAATTCACAATTCAACCCATTTTCCCTCTCTCTGTACTGACCGAACTGTGTTTCCACTGCCAATCATCAGCTTCTACCTTCTCTCCCTGTCTTTCTAACGAATCAATTGCAGTTGGGTCTGTCAGAAATCTGAGCTTAGCGCGATGTTAATGGCGGTTAAGCCCCCATTGGCTTCAAATGGGGCAATAGCTCCTTTACGACAAAACCCACTTGCGTTTTACTCGGCTTCGATTCCTTTGAAGCCCATTTCCCTCTCTTTGCCTTTGAATAACTCAAATCCAAACAATTGCTTTTGTTTGAAGCAGGTGCTGCCACACAGTTCTCGATTAAACTTGCCTCACCGCCGTTTCACTCCGGTCGCCGCCGTGGACTCCGATGTCCCCCAGTCACATCACCAGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCACTGCTATCCTACTTTGCAAAGAAGAGGGAGAAGGAGGCCATGGTGATTCAAACATTAGGAGCAGTTACCACATATATAGTTTTTGCCCAGCTTGCAATAGCAGGGGCCATGCCCCTGCCTTACTTTGCAGCCACGTCGGCTGTTGTGGCTTCTGGTCTTCTTATAAACTTTATGAATTACTTTAATGTTCTTCCTGTACAAATTTTGAAATTTTGGGAAGACTTCATCACTGTTGGTGGATTTTCTATCCTCCCCCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAGTAACCGCTTTGGTCGCAGCGCTGCTAGCAGTTGCTTTGGCACGAGCAGGAAAACTTCCTGAGAAAGGTGTGAAATTTGTTGGAGCATTATCAGGATGGACAGCAACCCTTCTCTTTATGTGGATGCCAGTTTCGCAATTGTGGACTAATTATCTGAATCCTGAGAACATTAAAGGCTTATCAGCTCTCACAATGCTTCTTGCCCTGATTGGAAATGGTCTTGTGCTTCCACGAGCATTGTTTATACGGGACTTCATGTGGTTCTTGGGTTCAGGTTGGGCAATTTTGTTTTATGGATATGCTAACATTGTATGCTTGTACTGTTGCAATGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTATTCTCCTGGATAGGCTTTTTCTTCTGGAGAGACTCTGTGGTATATGGATTCAACTCACCTCTAACATCTCTTAAGGAGCTACTTTTTGGATCCTGACTGCCAAATTCTAGCTTCAAGAAAAAGCCAGATTTCAAGCTGCTTTGACACAAATGCAGCAGCAGCAGCAACTGAAGTCTCAACTGCTTTTTCTCAATGGCTGCAATTGGGAAACAGTGGTTGAAATTTTAGCTCAAGCAAGAAGAATTTTGAAGAGGGAAAAAAACCAATCTAAGCAAC ATGTTAATGGCGGTTAAGCCCCCATTGGCTTCAAATGGGGCAATAGCTCCTTTACGACAAAACCCACTTGCGTTTTACTCGGCTTCGATTCCTTTGAAGCCCATTTCCCTCTCTTTGCCTTTGAATAACTCAAATCCAAACAATTGCTTTTGTTTGAAGCAGGTGCTGCCACACAGTTCTCGATTAAACTTGCCTCACCGCCGTTTCACTCCGGTCGCCGCCGTGGACTCCGATGTCCCCCAGTCACATCACCAGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCACTGCTATCCTACTTTGCAAAGAAGAGGGAGAAGGAGGCCATGGTGATTCAAACATTAGGAGCAGTTACCACATATATAGTTTTTGCCCAGCTTGCAATAGCAGGGGCCATGCCCCTGCCTTACTTTGCAGCCACGTCGGCTGTTGTGGCTTCTGGTCTTCTTATAAACTTTATGAATTACTTTAATGTTCTTCCTGTACAAATTTTGAAATTTTGGGAAGACTTCATCACTGTTGGTGGATTTTCTATCCTCCCCCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAGTAACCGCTTTGGTCGCAGCGCTGCTAGCAGTTGCTTTGGCACGAGCAGGAAAACTTCCTGAGAAAGGTGTGAAATTTGTTGGAGCATTATCAGGATGGACAGCAACCCTTCTCTTTATGTGGATGCCAGTTTCGCAATTGTGGACTAATTATCTGAATCCTGAGAACATTAAAGGCTTATCAGCTCTCACAATGCTTCTTGCCCTGATTGGAAATGGTCTTGTGCTTCCACGAGCATTGTTTATACGGGACTTCATGTGGTTCTTGGGTTCAGGTTGGGCAATTTTGTTTTATGGATATGCTAACATTGTATGCTTGTACTGTTGCAATGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTATTCTCCTGGATAGGCTTTTTCTTCTGGAGAGACTCTGTGGTATATGGATTCAACTCACCTCTAACATCTCTTAAGGAGCTACTTTTTGGATCCTGA MLMAVKPPLASNGAIAPLRQNPLAFYSASIPLKPISLSLPLNNSNPNNCFCLKQVLPHSSRLNLPHRRFTPVAAVDSDVPQSHHQGMLTGLLGNLALLSYFAKKREKEAMVIQTLGAVTTYIVFAQLAIAGAMPLPYFAATSAVVASGLLINFMNYFNVLPVQILKFWEDFITVGGFSILPQVMWSTFVPFIPNSILPGVTALVAALLAVALARAGKLPEKGVKFVGALSGWTATLLFMWMPVSQLWTNYLNPENIKGLSALTMLLALIGNGLVLPRALFIRDFMWFLGSGWAILFYGYANIVCLYCCNGVSREFFIAATAGLFSWIGFFFWRDSVVYGFNSPLTSLKELLFGS Homology
BLAST of Lsi10G002090 vs. ExPASy Swiss-Prot
Match: Q9LF50 (Maltose excess protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEX1 PE=2 SV=2) HSP 1 Score: 379.0 bits (972), Expect = 5.8e-104 Identity = 183/268 (68.28%), Postives = 219/268 (81.72%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy Swiss-Prot
Match: Q7XTQ5 (Maltose excess protein 1-like, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0602400 PE=2 SV=2) HSP 1 Score: 374.8 bits (961), Expect = 1.1e-102 Identity = 178/268 (66.42%), Postives = 220/268 (82.09%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy TrEMBL
Match: A0A0A0LQS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431130 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 4.3e-179 Identity = 335/413 (81.11%), Postives = 345/413 (83.54%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy TrEMBL
Match: A0A6J1JGC5 (maltose excess protein 1-like, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484255 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 3.4e-168 Identity = 317/411 (77.13%), Postives = 332/411 (80.78%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy TrEMBL
Match: A0A6J1FTY9 (maltose excess protein 1-like, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448421 PE=4 SV=1) HSP 1 Score: 592.8 bits (1527), Expect = 9.4e-166 Identity = 313/411 (76.16%), Postives = 330/411 (80.29%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy TrEMBL
Match: A0A6J1G7C8 (maltose excess protein 1-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451430 PE=4 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 8.8e-164 Identity = 309/412 (75.00%), Postives = 323/412 (78.40%), Query Frame = 0
BLAST of Lsi10G002090 vs. ExPASy TrEMBL
Match: A0A6J1L1D3 (maltose excess protein 1-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499523 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 9.7e-163 Identity = 307/412 (74.51%), Postives = 321/412 (77.91%), Query Frame = 0
BLAST of Lsi10G002090 vs. NCBI nr
Match: XP_004151852.1 (maltose excess protein 1-like, chloroplastic [Cucumis sativus] >KGN63344.1 hypothetical protein Csa_021984 [Cucumis sativus]) HSP 1 Score: 637.1 bits (1642), Expect = 9.0e-179 Identity = 335/413 (81.11%), Postives = 345/413 (83.54%), Query Frame = 0
BLAST of Lsi10G002090 vs. NCBI nr
Match: XP_038901955.1 (maltose excess protein 1-like, chloroplastic [Benincasa hispida]) HSP 1 Score: 618.6 bits (1594), Expect = 3.3e-173 Identity = 327/413 (79.18%), Postives = 335/413 (81.11%), Query Frame = 0
BLAST of Lsi10G002090 vs. NCBI nr
Match: XP_023513028.1 (maltose excess protein 1-like, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170 Identity = 319/411 (77.62%), Postives = 335/411 (81.51%), Query Frame = 0
BLAST of Lsi10G002090 vs. NCBI nr
Match: XP_022986549.1 (maltose excess protein 1-like, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 600.9 bits (1548), Expect = 7.1e-168 Identity = 317/411 (77.13%), Postives = 332/411 (80.78%), Query Frame = 0
BLAST of Lsi10G002090 vs. NCBI nr
Match: KAG6571213.1 (Maltose excess protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 597.4 bits (1539), Expect = 7.9e-167 Identity = 315/411 (76.64%), Postives = 332/411 (80.78%), Query Frame = 0
BLAST of Lsi10G002090 vs. TAIR 10
Match: AT5G17520.1 (root cap 1 (RCP1) ) HSP 1 Score: 379.0 bits (972), Expect = 4.1e-105 Identity = 183/268 (68.28%), Postives = 219/268 (81.72%), Query Frame = 0
BLAST of Lsi10G002090 vs. TAIR 10
Match: AT5G17523.1 (Similar to Maltose excess protein 1 ) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-21 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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