Lsi10G001810 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G001810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cadmium/zinc-transporting ATPase
Location	chr10: 2943534 .. 2953694 (+)
RNA-Seq Expression	Lsi10G001810
Synteny	Lsi10G001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTCTTCAACTACCACTTTTTGTTCTGTTTTGATTTGAATTGCTTGAATGAATGTGATTGTTGTAAATTTAATCACGAATCCCTTATAGGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGTGAGGGTCTAATGATATGCTCGAATCGATTCCATTCTAACTTGAAAATTCAGTGCTGACATGGTGAGATTTTGTAATCATGAACATCCATTATATAGTTTTTCATTTGGACCTCTCAATTATGTATATTAGAGGAGTTGAGAGGCCGTCGTTAATGTGTTTGATCTATTGTTAGGTGAAGTCTTTTTCTAATTATCCTTTACGTCATGTTTTGCTTGATTGGAGTCCCTTTCTTTGGTGGGACTCCTTTTGTGGGCTTGGTTCCTCAATTCCAAAAGCACCTAGTTCCTTCCTCAATTTCGGCTGCCACACATAAGCGGAAATCTGCCTTATTGATCCATAGATATTCATAGTTCTCTATGTCTGATAATGTTTTTTTATTCAGACCAGTGAAAGAGGGAACTTTGTGCGCAAGGTTTCTACAAATCAAATAGCAAAGGACAGTGGCCGAATATCATCGGAAGTTCAAAGCATTATCCGCGTTTGCCCACTTGTTTGAAGAAGTCTTGGAGGGCATGTTTTCTAATGGGCTTAACCTGGTTGTACAGGCGGAGATGTCCTGTTTCAGGCCTGATGGGCTCAAGGACATGATGTTTGTGGCCTAACTTGTGGAAGATAGCATGAAAGTTTCCAAGCTAGCCCAAGAAGATGGGCCGGGTAAGAAAACCAAACTGGAACCCATAGGTTGTTTGAAATTGGCGGGAAAAACACTAAGGTGATGGTGACACGTACAATTACGCCAGCTGAAAAGATCCCATCAAATCGTAGGGCCTATGTTATAGAGATTAGACCTATAAATGTCTTTTAAATTCTAATTTCCAAGCCCGACGTGATAGGGCCTATCTTATCATAGTGATGAGAGATACTCACCTGGTCACTGTTGCAACAACAAAGAACTAAGATTGCTAGTCTTCTCTAACAAATTTTACGAAGTGGAGATGTAGAGTCTACAAGGTGAGATGGAGAACACGGTGAGTTCCATAGTTGAGTTATCCTTAAATTCAGTGGTGGGGTTGACGACTCCAAGGACTATGAAACTCAAAGGGAGAATAGGGGAGCAAAAGATCTTAATTCTGATTGATTGCAAGGAGACCCATAATTTCATTGCTCAAGGATTAGATGAAAACTTGAAGCTTCTGTTGACCAAAACCATGCAATATGGTGTGGTCGTGGGCTAAGGGGAAGCAATGAAAGGAAAAGTAATATGTAAGGTTGTCACGGTTTCGCTTCGAAAAATGATTGTACAAGAGGATTTCCTTATTTGTATTTAGCTGGGAATGTAATGGTTGAGGAAGCAAGGGGCCATGACAGTTGACTGGAAGTCTTTTAGCATGTCGTTTCGAGTGGGAGACTCACACATTGTTTTAGAAGGAGACTTGGCATTAGCTCATATGGAAATATCCCTAAAGATGTTGTAACAGACCTAGGAAGATGAAGATCAAGGATTCTTAGTGGAGTTTCAAGAGTTGGATTTACAAGGGGTTCGAGAGGGGGGAGATTTGGTGACTGATATGGGAATCTCTGAGTTGGATCATTTGTTTACAAAGTATGTGTTGGGGAAAATGATATATATAAGAACTGAATACACAAGCAAACTGATTACATCTCAACTAAATACAGTATACATGTTGTACACAATAATAATGTTCAAACCGAAAAGTAAGCCAAATAATATAATAAGACTTATGAATTTAAATTGTTAAAGGAAATTAGATTTATTCCCAATTATTAGTTTTCTTTGTAGTATTTTTTCCTTTTCTGTATTTTCCTTTATTAGTTTCTTGGAGTCTATATATTCATTGTATTCTGATTATTCAAAATATATCGAATATATACAAATTATTCATAAATCACAACATGGTATCAGAGCCATAAGTCCTAGGGTTTTACACTTTTCGAACTCTGCCTCCATTGACGGTTGGTCGATGGAGGCAAATCCACGAAATCTCGTCACCGTTACACAGCTCCGACATGTTCATCCATATTTGTCACTGTCTTTGTTATGCTTTTAGATCTATGTTGGTGGATCTCTGTCACTGTTCATGTTCTGTCTTCAGATCTGTGTTTGTGGATCTCTGTCCCATTTTCAATTCGGTTGTTTGTGGGTTCTGTTTCAGATCTCTATGTATGTCTTTGATTCCAGTCCAAAAATTCTTCGTGGGTCTTTGTTTTCGGTCCAAAAATGCTTTGTAGGTATCTATCTCCAACCCAAAAATTGTTTGTGGATCTCTGTTTTTGGCTTAGGAGTCTTTCATAGTCTTTGTTTCCAGCCCAGATCTTTCGTGATTTGTTTCCAGCTCAAAAGTTTTTTCAGTATCTGTCATCTGCCATCTTGTCAGTTAACAAACTCAAGTTGGTCACTTTGAGTTTGAGGGAGGGTGTTAAAGGAAATTAGATTTATTCCCAATTATTAGTTTCCTGTGTAGTATTTTTCCTTTTCTGTATTTTCCTTTATTAGTTTCTTAGAGTCTATATATTCATTGTATTCTGATTATTCAAAATATATCGAATATACACAAATTATTCATAAATCACAACAAAAATAACTAAGAATCTCAAGATATTGTGGAGACGTCAATAGGTAATCATAGCACGCTTTTGATAAGCGTCGTTCTGAAAACAATTATTCACTTTGCACCAGATGCAAGCAAACTACAACGTTCGTCTTAATAAGATGCAACAACTAACTCCGGAAGAACTGCAACCTCGAAATACTCGGATCTGGCAGAACTTTTGGATACTTGCTCTCAACTCAACTCAAGATCAAAATAAAGAAAGAAAGGAAAGAACTCTTCAATTTGAAGTGAGTCACAACGAATGAAACAATAAGTTATTTATAGGCTAGCAACTTAGTAACTCCCCAAAATATAAAATAAAATCAAATAAATACAAAATTGAAACATTTGTCAAATTTAACTCAATTGAGTTGTTACTTGACCAAAATCAAACATGATACATTCAAATTGAAGAAACTACACATTTAACTTTTATACATATTAAATTTATACATGAAACATCATCTTAATTTGATGGTTTCAATTCAATTTGAAGTTTCTAACAATGAATGTAATCTGCATAATTAAATCTATTTTTTATGTTAAAAAAATTTCACAAAAGTTTCACTTTCTTTCACTATAAATATCCAACAGTATGAAGATGTGTTTAATATGCCCGACGAACTTCCACCATCTAGATCCATAGATCACCGTATTCAGTTGAAGGATGGGAAACTTTTATTCTGTGGAAAAGGCAGTCGGATTGTAAAGCAATATGGGAATCTGTCCCTCGCATGCAGCGCCAATTTCCCCATTTCCACCTAAGGACAAGGTGTCTTCTGAAGGAGGGGGTATTTTTAGACTCCTTATTGTGAATGCTTATGTTAGGAGCGGTAAATTGGGAAATGGATGTAGTACTAGCCGTTAGTGGGCTGGTCGGCTTGTGTCTTGTTTTGGGTTAGCCTAGTCGATTAGGGTTTTTTGTTGCAGAAAGTCTATTTGTACGTTCCTGTTTTTCCTTCTGGTGTTATGTTATGTATTTTGAATAGAACTTTGTTCTAAGAGGAGAGGAGATCGGTGCTCTCTAATCGGCTGGCCAGACTATTTTATAACCCTTGCTATCAGAATATTATTTATAAGAATTGATATTAAGACCAAGAGTCTTTACATATACCTCTCGAAAATTTTCCCAAATGCCTTGCCTCCTAGCTTTCCCTGGGTACAAGTTGGTACTTACCTGATTGCATACTTTACGTGATCATAAAAGTGTAACTATATTTGTGTTCTAGTGGCTAAAAGGAAATGAAGAAATATTGATCAGATCAACCTCCCCCCACAAAAAAAGGGGCAAAATATAAAACAGGGTAGGTCTCACTGTACAAGTATTTATTTACGTATAAAATATCCAAGGATAATAGATAGAAAAACATTTATTTTATGCTACAAGAACCCACATATTCATGTTTTGATATTTTCCTTTCACTCTTTAGGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTAAGGTAATAATTCATAATTACAATTCATACAAGTATGTGCTTCTTTTCCATCCATAAATCCAACATCATCTATCATTCCGTCTGTGAGTTATTCTGATGTAAGTCATGCCTTCATAATAAGGTTGTAGAGTCAGATGCATCCAACAAATAAACACGATTAATATTTGATTCTCTCTGTACGCTATCATTTATCTTGTGCTCGTCCTTTTTTCTGTTGAAGTTTGTGACATAATCTATCTTTGCATGATATTATGATTTATCAACTAAAACGCAACAATTCTACAAAGAAACAAAGCATGTATAATAGAAGTATGAAAGCTTCGTTTTCATCCCCAATCGTTTCTCCAAGAATCTTGAATTCATAAGTTATTTTCTTGAATTCATCAAGATTTTCTTATAGAGTTTTGGCAGCATCCATTTTGAATGTAAAAAATCTCTCACGAAGATACATTTTGTTTGGCAGATCCTTGGAGACATACAGAGCATTAAGCTTGGTCCATATCTTGTGAGAGACTTCTTCATCGATGACCTGCCTTAGCACATTATCGCTTAAATTTAGGATCAATGTTCCAAAGGCAGTCGTCTCTAAGGTTTCTTTTTCTTCGTCTGTCATGGTGGCTGGAAGTTCGTCTGGGTCTTGAAGAGCTCTTAAAGCCTTTTGGTGTCCCAGGATGGCTTTGATTTTGGCTTTCCATAAACCAAAATCAGATTTACCATCAAATTTTTCTATGTCAAACCTTGCCACAGCCATTCTTGATTTATGAAAAAAATCAAGAAGTAGTTTCTTGGTTAGTGTATGAATGCTCTAATACCACTGTTACAATTCAACACACTTTACACAACCGAGAAACGAAGGACAAAGAAGAAAGAAAGACTAAAACCAGAAGATGAGATGAAGAGAAGAAGATAACACACTCAAGCTATATTGGTTTGGCTATATAGCCTACATCCACTTTGAAGGGTAACACACTTTATTACTGAAGAGTTCAAGGAATACAAATGAATCACAATGTGATCTGCAAAAGGATTTTTTCAATCCATACTAAAGAAGATATATGCAACTTATATATATAGACAAAAACAGACACGAACTTAAGAGTTGTTGAAGGATTCACACTGTAACGGAAATAACCAATAGTAACTTTATCGTATTGCATAGTCAGTAACTGGCAAGGTGATTTTGCATTCGTCTTGATTTATTATAGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGGTATGATTTAAATTTTCATAAATGGGCCAGGTTTCTACTTATTCTTTACCTTTCTAGTATGACTAGATATTAATCTAGTGTTGCCTTGTTAGGTTTGCTTTTCTCATCAAATAATGATTACTATATTTAAAACAAGGATAGTTTCTATGACATGGTTTCCGCAATGAGTCTGCATGTTATGATTGATTGCTGTTAGCTGAATATGTTTCTTGAGGTTTAATTTAAGAATAAAATTTTGTTATTTAAACAGTAAGGTGGCTCTGGTGCTATGTGATTTCCTTTTCTTATTTATTTATTTTTTATTTTTTAAAAAAAAAATTTGACTTTCATAGATGAAGATGAAAGAATACATGGGCAAAAATTCATAAGGAGCTAAACTACAAGAAATATCTCTAGTTAAGAGAAATTAGATCAAGCAAGTAATTACAAAAGAGCCTAGAAACATAGGCTTAGAGAGACACGAAGAAGCTAATAAGAGACTGAACATCGCTCCAAGAACTCTCATGTCCTTCAAAGATTTTGTTGTTCCTCTGGCTCCAAAGGCTCTACGCAATAGCACATCTCTTAGCCTCCCACAAAAATCACTCTTTATCTCAAAAAAGCAGACAGAGTATAAACTCCTCAAGCGACTCTTAGAAAATCCAAAAATTGACAAAGTTGAAACCAAATGCCTCAAAGAAAGTGCCCCAAACTACACAAGCAAGATCACAATTCCACAATATATGATGAAGTCCTCAATTGTCCTCTTGCAAAGAATACAACAATGCAATCACCAAAAATCCTCTAGTTGAGATCCGACCCCAGATGTTATCTATTCCGTGCAAAACTTGTCACGCAAAAAACTTGACCTTCCAAACTGAGGAAAAAATTGAATTACCCGTCAAGGAAGGATTAGTAAAACACTAGATGAAAGAGCTACAAGAAAAACCTTTAGGAGGACAAGGACTCAAAAGGCAGGCACCCCTCCTCTCGGGCCTAAAGCAAATAGAGGATAAGAAAGCCAAATGTTAGATGATATAATATTAAATTTGTCTTCACCCATCAGTTTAAGCTTTTTGGTCAATCACTGATTTAAGATGGTATCAGAGCCGATGGTCCAGGGAGGTCCTGTGTTCAAACCGCTACAAATTAATTGCAAAAATAAATTAGGAGGGGGATAGAGAAATTGATACTGTGATTTGCAGTGGTTCGGCACAACCCAACCTACATCCACTTCCCAAACTCTTCTTGGGTATGTCACTCAAACTTGATTCTTTCCACGGTTGAGGATCAAACTATTACACTAACTCTTTTTCCGAGATCAAGAGCAACCTTTACGAAAGTTTGGAAAAATTAAAGAGCACACTTGTCAAACTCTCTAAAAGAGTGGATTTACAAATTTTGAGCTCACAATGAATCAATTCTCACAATACATAAATCACTCTCAATAATTAGATGAAATGAAGAAAATGGAAGCTTAGAGAGAGCAACAATAGAAGCTTTTTGTTTTTGGATAGGATTGAAAATTATAAAGATTGTTGTAGAAATATGGAGAAAAAGATGAGTCTAAAAAGAGAGGGAAGTTGGTGAAATCTAAATTCAATTTGGGCCTTTAGATCTTTGTAAAAGAAAATTGAATGGATGAGATTAAATATAAAAAATAAATATATATTTTTTAAAGTTAACTAGTTGTTAGCAGTGTTTTGAAAGGCGCACCTAGGCGCAAGGCGCAACAATGGCACCTCGCCTCGATAAAGCGAGGCGCACGCCTTACAGCGCCTTCGAAGAAGTGCTGAGGCGCTGCCTCTTCGGGCTCTTTCATCTCTATCCGTCAATTCTTATTCGTGGATGGTTGCGGCGTTCAGCTTTAGGGTTTACTGCTGCCATGTCCAAGTCGGGGAAGAACTCATTAGGGTTGTCAGTGATTACAAAAAAATGGTGAAAAAGTGGACTTACAGAGAAGAAAATCGAAAAGGATGAAGCATAAAGAAGAAGATGAAGGAGGTGGATGGGATGAGAGGCACGAAGAAAGAGAGGAATTTGAAAAGACATGCCTTGATCGGTGGGCTTGTAAAAATAATATTTAAATCGATCTTATTTTTTCTCTCATGTTTACACGTGTCTAAACATGTGTAATGTGAATTTTTAACTCTTTTCAATTCAATTAACATTATTTTTTTTTTTATTCTTTTTTCAAATTTTCTTCTTTGCTGACAGTCATCTTTGTTGCTCCAAAAAATAATTTTGGTACATCCCAAGTTAGTTTGTTTATAACTTTAAACCTGGTTATCTTTTATATATTCTTCCTCAAGTCTTATTTCTTTCCATCAAGGTTTTTGTTCTGTATAGTGTATATATGTATTTATATTTTTTATATATAATGTGCCTCATGAAAAAAGTCTGCGCCTTTTTGTGTGCCTTGCGCCTAGGCTCTAGAGGACCATTGCGCCTTAATTCGTCTTGTGCCTTTCAAAACATTGGCCGTTAGACACAAACATATATAATATTAAATTCATTTACTTTTAAAGTCAATTAGTCGTTAGACACAAACATATATATTAAATTCATTTTCTTTTTAAACTCATTTCCTTTTAAAAATCAATCCAAAAATCAAAACTCCACCCTTTGTCATTTCTCTCATGCTCCCAAGTGCCATCTTTCAATTGGTCCACTTTGATTTAAATTTTTTTTTTTTTTTTTGTCATGTCATCAATTCGGGATTTTTTTTCTAAGCTCGTTTTGGCTATATCTTCTTCATTTGATCTCCGATTTGAGTGATTCAAATTGCATTGGAATCGTTGTTTCTAGCTCTACTCAATGGACTCTTAAAAAAGTACTCAAATTGTTAGTGAATAAAAGCAGGTTTGTTATCATCAAAATATTAATTAATTAATTAATTAAAATAAATTTATTTGAGATTAAGCGCCAAAAAGTCAACAGATATGATATTAAATTAGCCTTCACCCATTAACTTAAGTTTTTTGGTCAATTGTTGATTTAAGACCAAGACATCCGACCCCTATGAAAGGATGATGGAAACCTAGGGAAGGAGGCCAATTGGCCTGATCAAGGATTAAAGCAACTTAGTAGTATTTAATAAAGAACAAATGATATAAGCTAGGGTATAAGGAGCAAAAAAGACTATTCTCCAACCAACTGTGCTCCAAAAATAAGTACCCCACCCATTCCCCACCACATTATGAATAAACTGAGAAAGAAAAGAACTCTGAAGCGATTGCTTTCTACGGGGTCTGGGAGCGACTTTAAACCCCTCACGGACCCCTCTAAGGAATGTTACTAAGAATTATCTTGTGCAATAATGTATCAACTTCATGATAGGTTCACTAGAGCCATTTACCAGCTAGGCTTATGGCCGGTGGGAATATGCTGGGAAATTTTCAACAACAGTAAGCATTACATTGCAGAGTTAATGACTAAGACTGATGAGACAAAATTATAAGTTTATGTATTTATAGACTCTTATAAATACAAGGATGAGAGACACAACTCTTGAAACTTAGGACCAAACTTATAATTTTGTTAAAAAAAATTAATCAAAGTTGTACCTGAAAAGGAACATAGTTGACAATGAATGACAGATAGCTAACATAACATTTTAAAAGAATGCTTTTTTTAGTTGACATTTTATGAATGTAAAATATTCGTCTTTCCCTACCCCATTGGAAAATACAACGTATTCTACCTAAATAGAAGTTCCATCCAATTGGTATTATCAGAATACATTTTTCATATCTCACCTGATTGAAAAGAACCCAACCCTTTCAAATTATCAACCTCCGTTCTTTCCTTCGTGCAACCTTTCTTCTTCATTTATTCAACCAACCATTTTCCTTATAGTTGCAGTTGCAACTCAATCTTCTTTCATCATGTTTTGAAATTTGGTAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

mRNA sequence

ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

Coding sequence (CDS)

ATGGGAACCCTCTCCTTCCCAATTGCATCTTCAAAACCCCGACTCTTATCAATTACAAACCCAATTGCATTTCCTAACTGTTTTCTTCAAACATCTTCCCCTTCTTCTGCAATTCGCCTTCGTAATTTTTCCATTCTCTATCTACGGCGGAGTGTTCTCTGTTCCGCTGCGGAAACTGGTCGTTCGAATCACGATGACCACCACCATGTTCATGATCACCACCACCACCACCACCACCATGGTCACCACCATTGTGATCATGATGTAGAGCTGTTTGGGCCTCAGAAAGCGATGATTGGATTAGCTAAAGCCATTAGGTGGACGGACTTGGCGAGCTATCTAAAGGAGCACTTGCAATTATGTTGTTGCTCTATGGCTTTGTTTGTGGCTGCTGTTGTTTGCCCATATTTGGTGCCGAATCCCATTGTAAAGCCTTTGCAAAATGCTTTAATTGTCATTGCTTATTCTTTAGTCGGGGTATGGATGTTGAAAATTCTTGAAGTTAATGTGGTTTTTATAATTCTAAACCTAGCACTACTACGACTTGAGCAGTGGTCGACCATAGTATGGGAAAAAACCTCCCTTCCTTTTCTGTCTAGAATTTGGAATACTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGTCGGGAATTGAAGGTGAGAAACTATTGAAAGCATCTCTTGGTTCCTTAGATTTCATCACTTCATGCTACAAATCAGAATCCAAATCAAAAGAGATCAAAGAAGTTGTGAACACATCTTCATATAAAAGCGAGTTTGTTCATGATGCTCTTGCAGTTGATGGGAAGCCTCTTGGTTTTTGCACCAATCTTTGGTGCATTGGGGGCAATTTCAATGTGGTGCGCTGGCTGAATGAGAAATCCAGAGGTGTTCCATTCTGTATTGCCAAATCTCGCCAGACTGACTTCTTAGTAATTTTAAGCCAACCACCCTGCTCTCGTAACCTTATGAATTCGTTTGGATTGACTTGA

Protein sequence

MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETGRSNHDDHHHVHDHHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGVWMLKILEVNVVFIILNLALLRLEQWSTIVWEKTSLPFLSRIWNTFRVEDLLQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGKPLGFCTNLWCIGGNFNVVRWLNEKSRGVPFCIAKSRQTDFLVILSQPPCSRNLMNSFGLT

Homology

[Close]

BLAST of Lsi10G001810 vs. ExPASy Swiss-Prot
Match: Q9M3H5 (Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HMA1 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 50  RSVLCSAAETGRSNHDDHHH--VHDHHHHHHHHGHHHCDHDVELFG---PQKAMIGLAKA 109
           RS+   A E    +H DHHH    DHH+HHHHH  H C   VEL     PQK + G AKA
Sbjct: 57  RSIRLRAVE---DHHHDHHHDDEQDHHNHHHHHHQHGC-CSVELKAESKPQKMLFGFAKA 116

Query: 110 IRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           I W  LA+YL+EHL LCC + A+F+AA VCPYL P P +K LQNA +++ + LVGV
Sbjct: 117 IGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFMIVGFPLVGV 168

HSP 2 Score: 65.1 bits (157), Expect = 1.7e-09
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 219 EGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           E  +L KASLGS++FITS +KSE +SK+IK+ VN SSY  +FVH AL+VD K
Sbjct: 550 EESRLRKASLGSIEFITSLFKSEDESKQIKDAVNASSYGKDFVHAALSVDQK 601

[Close]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL
Match: A0A6J1G7D7 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451500 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 4.8e-55
Identity = 119/161 (73.91%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           MGTLSFPIASSKPRLL   + IAF N  LQ S PSSA  + NF  L+LRR VLC+ A   
Sbjct: 1   MGTLSFPIASSKPRLLPSRSRIAFSNPSLQPSFPSSAFSVPNFPNLHLRRLVLCATAAND 60

Query: 61  RSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
            SNHD+HH VH+HHH HHHHHGHHHCDHD EL GPQ+A+IG AKAIRWTDLA+YL+EHLQ
Sbjct: 61  HSNHDEHHRVHNHHHGHHHHHGHHHCDHDAELTGPQRALIGFAKAIRWTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPYLVP P VKP QNALI IA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL
Match: A0A6J1G7D7 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451500 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 210 LLQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDG 269
           +LQ   SG EG KLLKASLGSLDFITS YKS++KSK+IKE  +TSSY SEFVH ALAVDG
Sbjct: 535 MLQGIESGTEGGKLLKASLGSLDFITSLYKSDTKSKKIKEAASTSSYGSEFVHAALAVDG 594

Query: 270 K 271
           K
Sbjct: 595 K 595

HSP 2 Score: 224.2 bits (570), Expect = 8.2e-55
Identity = 119/161 (73.91%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           MGTLSFPIASSKPRLL   + IAF N  LQ S PSSA  + NF  L+LRR VLC+ A   
Sbjct: 1   MGTLSFPIASSKPRLLPSRSRIAFSNPSLQPSFPSSAFSVPNFPYLHLRRLVLCATAAND 60

Query: 61  RSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
            SNHD+HH VH HHH HHHHHGHHHCDHD EL GPQ+A+IG AKAIRWTDLA+YL+EHLQ
Sbjct: 61  HSNHDEHHRVHYHHHGHHHHHGHHHCDHDAELTGPQRALIGFAKAIRWTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPYLVP P VKP QNALI IA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL
Match: A0A6J1KX68 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499582 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 211 LQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 270
           LQ   SG EG KLLKASLGSLDFITS Y+S++KSK+IKE  +TSSY SEFVH ALAVDGK
Sbjct: 536 LQGIESGTEGGKLLKASLGSLDFITSLYESDTKSKKIKEAASTSSYGSEFVHAALAVDGK 595

HSP 2 Score: 217.2 bits (552), Expect = 1.0e-52
Identity = 122/170 (71.76%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPI-AFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPI SSK  LLS  NP+  F + FLQ+S  SS    RNF IL+LRR VLCSAA  
Sbjct: 1   MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILHLRRRVLCSAAAA 60

Query: 61  GRSNHDDHHHVHD---------HHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDL 120
           GRSNHDDHHHVHD         HHHHHHHH HHH DHDVEL GPQKA+IG AKA RWTDL
Sbjct: 61  GRSNHDDHHHVHDHNHGHHHHHHHHHHHHHHHHHGDHDVELSGPQKAVIGFAKATRWTDL 120

Query: 121 ASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           A+YL+E LQLCCCSMALFVAA VCPYLVP PIVKPLQ A IVI + LVGV
Sbjct: 121 ANYLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGV 170

[Close]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL
Match: A0A5A7VJB5 (Putative cadmium/zinc-transporting ATPase HMA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005290 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.9e-13
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 220 GEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           G KLLKASLGSLDFITSCYKS +KSKEIKE  NTSSY SEFVH ALAVDGK
Sbjct: 551 GGKLLKASLGSLDFITSCYKSGTKSKEIKEAANTSSYGSEFVHAALAVDGK 601

HSP 2 Score: 213.0 bits (541), Expect = 1.9e-51
Identity = 121/168 (72.02%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPI-AFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPI SSK  LLS  NP+  F + FLQ+S  SS    RNF IL LRR VLCSAA  
Sbjct: 1   MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILRLRRRVLCSAAAA 60

Query: 61  GRSNHDDHHHVHD-------HHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLAS 120
           GRSNHDDHHHVHD       HHHHHHHH  HH DHDVEL GPQKA+IG AKA RWTDLA 
Sbjct: 61  GRSNHDDHHHVHDHNHGHHHHHHHHHHHHRHHGDHDVELSGPQKAVIGFAKATRWTDLAK 120

Query: 121 YLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           YL+E LQLCCCSMALFVAA VCPYLVP PIVKPLQ A IVI + LVGV
Sbjct: 121 YLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGV 168

[Close]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL
Match: A0A5D3BGM3 (Putative cadmium/zinc-transporting ATPase HMA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G001560 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.9e-13
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 220 GEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           G KLLKASLGSLDFITSCYKS +KSKEIKE  NTSSY SEFVH ALAVDGK
Sbjct: 549 GGKLLKASLGSLDFITSCYKSGTKSKEIKEAANTSSYGSEFVHAALAVDGK 599

HSP 2 Score: 213.0 bits (541), Expect = 1.9e-51
Identity = 121/168 (72.02%), Postives = 127/168 (75.60%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPI-AFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPI SSK  LLS  NP+  F + FLQ+S  SS    RNF IL LRR VLCSAA  
Sbjct: 1   MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILRLRRRVLCSAAAA 60

Query: 61  GRSNHDDHHHVHD-------HHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLAS 120
           GRSNHDDHHHVHD       HHHHHHHH  HH DHDVEL GPQKA+IG AKA RWTDLA 
Sbjct: 61  GRSNHDDHHHVHDHNHGHHHHHHHHHHHHRHHGDHDVELSGPQKAVIGFAKATRWTDLAK 120

Query: 121 YLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           YL+E LQLCCCSMALFVAA VCPYLVP PIVKPLQ A IVI + LVGV
Sbjct: 121 YLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGV 168

[Close]

BLAST of Lsi10G001810 vs. NCBI nr
Match: XP_038900941.1 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida] >XP_038900942.1 probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida] >XP_038900943.1 probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 236.1 bits (601), Expect = 4.3e-58
Identity = 128/161 (79.50%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITN-PIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPIASSK RL S  N PIAF N FLQ+S  SS  R  NF IL+LRR VLCSAA T
Sbjct: 1   MGTLSFPIASSKSRLSSTPNHPIAFSNPFLQSSFSSSPFRPPNFPILHLRRRVLCSAAVT 60

Query: 61  GRSNHDDHHHVHDHHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
           GRSNHDDH HVHDHHHHHH H HHHCDHDVEL GPQKA+IG AKAIR TDLA+YL+EHLQ
Sbjct: 61  GRSNHDDHQHVHDHHHHHHRHAHHHCDHDVELSGPQKAVIGFAKAIRLTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPY VP PIVKPLQNA IVIA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYFVPKPIVKPLQNAFIVIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. NCBI nr
Match: XP_038900941.1 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida] >XP_038900942.1 probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida] >XP_038900943.1 probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-14
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 0


Query: 216 SGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           SG EG K LKASLGSLDFITSCY+SESKS+EIKE  NTSSY SEFVH ALAVDGK
Sbjct: 541 SGTEGRKRLKASLGSLDFITSCYQSESKSREIKEAANTSSYGSEFVHAALAVDGK 595

HSP 2 Score: 224.9 bits (572), Expect = 9.9e-55
Identity = 119/161 (73.91%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           MGTLSFPIASSKPRLL   + IAF N  LQ S PSSA  + NF  L+LRR VLC+ A   
Sbjct: 1   MGTLSFPIASSKPRLLPSRSRIAFSNPSLQPSFPSSAFSVPNFPNLHLRRLVLCATAAND 60

Query: 61  RSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
            SNHD+HH VH+HHH HHHHHGHHHCDHD EL GPQ+A+IG AKAIRWTDLA+YL+EHLQ
Sbjct: 61  HSNHDEHHRVHNHHHGHHHHHGHHHCDHDAELTGPQRALIGFAKAIRWTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPYLVP P VKP QNALI IA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. NCBI nr
Match: XP_022947718.1 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-13
Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 210 LLQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDG 269
           +LQ   SG EG KLLKASLGSLDFITS YKS++KSK+IKE  +TSSY SEFVH ALAVDG
Sbjct: 535 MLQGIESGTEGGKLLKASLGSLDFITSLYKSDTKSKKIKEAASTSSYGSEFVHAALAVDG 594

Query: 270 K 271
           K
Sbjct: 595 K 595

HSP 2 Score: 224.9 bits (572), Expect = 9.9e-55
Identity = 119/161 (73.91%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           MGTLSFPIASSKPRLL   + IAF N  LQ S PSSA  + NF  L+LRR VLC+ A   
Sbjct: 1   MGTLSFPIASSKPRLLPSRSRIAFSNPSLQPSFPSSAFSVPNFPNLHLRRLVLCATAAND 60

Query: 61  RSNHDDHHHVHD-HHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
            SNHD+HH VH+ HHHHHHHHGHHHCDHD EL GPQ+A+IG AKAIRWTDLA+YL+EHLQ
Sbjct: 61  HSNHDEHHRVHNHHHHHHHHHGHHHCDHDAELTGPQRALIGFAKAIRWTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPYLVP P VKP QNALI IA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. NCBI nr
Match: KAG6605188.1 (putative cadmium/zinc-transporting ATPase HMA1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-12
Identity = 43/54 (79.63%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 217 GIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           G EG KLLKASLGSLDFITS YKS++KSK+IKE  +TSSY SEFVH ALAVDGK
Sbjct: 498 GTEGGKLLKASLGSLDFITSLYKSDTKSKKIKEAASTSSYGSEFVHAALAVDGK 551

HSP 2 Score: 224.2 bits (570), Expect = 1.7e-54
Identity = 119/161 (73.91%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPIAFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAETG 60
           MGTLSFPIASSKPRLL   + IAF N  LQ S PSSA  + NF  L+LRR VLC+ A   
Sbjct: 1   MGTLSFPIASSKPRLLPSRSRIAFSNPSLQPSFPSSAFSVPNFPYLHLRRLVLCATAAND 60

Query: 61  RSNHDDHHHVHDHHH-HHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDLASYLKEHLQ 120
            SNHD+HH VH HHH HHHHHGHHHCDHD EL GPQ+A+IG AKAIRWTDLA+YL+EHLQ
Sbjct: 61  HSNHDEHHRVHYHHHGHHHHHGHHHCDHDAELTGPQRALIGFAKAIRWTDLANYLREHLQ 120

Query: 121 LCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           LCCCSMALFVAA VCPYLVP P VKP QNALI IA+ LVGV
Sbjct: 121 LCCCSMALFVAAAVCPYLVPKPFVKPCQNALIAIAFPLVGV 161

[Close]

BLAST of Lsi10G001810 vs. NCBI nr
Match: XP_023006942.1 (probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-12
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 211 LQLCMSGIEGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 270
           LQ   SG EG KLLKASLGSLDFITS Y+S++KSK+IKE  +TSSY SEFVH ALAVDGK
Sbjct: 536 LQGIESGTEGGKLLKASLGSLDFITSLYESDTKSKKIKEAASTSSYGSEFVHAALAVDGK 595

HSP 2 Score: 217.2 bits (552), Expect = 2.1e-52
Identity = 122/170 (71.76%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 1   MGTLSFPIASSKPRLLSITNPI-AFPNCFLQTSSPSSAIRLRNFSILYLRRSVLCSAAET 60
           MGTLSFPI SSK  LLS  NP+  F + FLQ+S  SS    RNF IL+LRR VLCSAA  
Sbjct: 1   MGTLSFPIPSSKSHLLSNPNPVPLFRHPFLQSSFSSSPFPSRNFPILHLRRRVLCSAAAA 60

Query: 61  GRSNHDDHHHVHD---------HHHHHHHHGHHHCDHDVELFGPQKAMIGLAKAIRWTDL 120
           GRSNHDDHHHVHD         HHHHHHHH HHH DHDVEL GPQKA+IG AKA RWTDL
Sbjct: 61  GRSNHDDHHHVHDHNHGHHHHHHHHHHHHHHHHHGDHDVELSGPQKAVIGFAKATRWTDL 120

Query: 121 ASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           A+YL+E LQLCCCSMALFVAA VCPYLVP PIVKPLQ A IVI + LVGV
Sbjct: 121 ANYLRESLQLCCCSMALFVAAAVCPYLVPKPIVKPLQIAFIVIGFPLVGV 170

[Close]

BLAST of Lsi10G001810 vs. TAIR 10
Match: AT4G37270.1 (heavy metal atpase 1 )

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-20
Identity = 61/116 (52.59%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 50  RSVLCSAAETGRSNHDDHHH--VHDHHHHHHHHGHHHCDHDVELFG---PQKAMIGLAKA 109
           RS+   A E    +H DHHH    DHH+HHHHH  H C   VEL     PQK + G AKA
Sbjct: 57  RSIRLRAVE---DHHHDHHHDDEQDHHNHHHHHHQHGC-CSVELKAESKPQKMLFGFAKA 116

Query: 110 IRWTDLASYLKEHLQLCCCSMALFVAAVVCPYLVPNPIVKPLQNALIVIAYSLVGV 161
           I W  LA+YL+EHL LCC + A+F+AA VCPYL P P +K LQNA +++ + LVGV
Sbjct: 117 IGWVRLANYLREHLHLCCSAAAMFLAAAVCPYLAPEPYIKSLQNAFMIVGFPLVGV 168

HSP 2 Score: 65.1 bits (157), Expect = 1.2e-10
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 219 EGEKLLKASLGSLDFITSCYKSESKSKEIKEVVNTSSYKSEFVHDALAVDGK 271
           E  +L KASLGS++FITS +KSE +SK+IK+ VN SSY  +FVH AL+VD K
Sbjct: 550 EESRLRKASLGSIEFITSLFKSEDESKQIKDAVNASSYGKDFVHAALSVDQK 601

The following BLAST results are available for this feature:

BLAST of Lsi10G001810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3H5	1.4e-19	52.59	Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Arabidopsis tha...	[more]

BLAST of Lsi10G001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7D7	4.8e-55	73.91	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita mosch...	[more]
A0A6J1G7D7	2.7e-13	75.41	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita mosch...	[more]
A0A6J1KX68	1.3e-12	75.00	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic OS=Cucurbita maxim...	[more]
A0A5A7VJB5	5.9e-13	86.27	Putative cadmium/zinc-transporting ATPase HMA1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3BGM3	5.9e-13	86.27	Putative cadmium/zinc-transporting ATPase HMA1 OS=Cucumis melo var. makuwa OX=11...	[more]

Pages

BLAST of Lsi10G001810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900941.1	4.3e-58	79.50	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Beninc...	[more]
XP_038900941.1	2.9e-14	83.64	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic isoform X1 [Beninc...	[more]
XP_022947718.1	5.5e-13	75.41	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucurbita moschat...	[more]
KAG6605188.1	3.6e-12	79.63	putative cadmium/zinc-transporting ATPase HMA1, chloroplastic, partial [Cucurbit...	[more]
XP_023006942.1	2.7e-12	75.00	probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Cucurbita maxima]	[more]

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BLAST of Lsi10G001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37270.1	1.0e-20	52.59	heavy metal atpase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43079:SF3	BNAA09G42040D PROTEIN	coord: 216..270
None	No IPR available	PANTHER	PTHR43079:SF3	BNAA09G42040D PROTEIN	coord: 49..161
None	No IPR available	PANTHER	PTHR43079	PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1	coord: 216..270
None	No IPR available	PANTHER	PTHR43079	PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1	coord: 49..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G001810.1	Lsi10G001810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098655	cation transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019829	ATPase-coupled cation transmembrane transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding