Lsi10G001290 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G001290
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	EC metallothionein-like protein
Location	chr10: 1995845 .. 1996177 (+)
RNA-Seq Expression	Lsi10G001290
Synteny	Lsi10G001290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTAATCGGACGGAAAAGGAGAAGAGAGTTGACGGAATAGAGATAATTAATAATATGGCAGAATCAGGCGGCGGCAGAGGCGGAGTCAGGGCTTGCAACCAGAGCTGTGGTTGCGCAGTTCCCTGCCCCGGCGGCAACGCTTGTAGGTGCGCGACGGCCTCGGCACCGGCGCCGGCGGGAGGAGAGATGGCGCACGTGACATGCTCGTGCGGGGAGCACTGTGGGTGCAATCCCTGCACGTGTTCCAGCGCGGTGGTTGGAGTTGGGAAGGGTAACTGCAGGTGCGGCGAGAATTGTCGGTGTGAACCGTGCCGGTGTGAAACATGA

mRNA sequence

ATGAAAACTAATCGGACGGAAAAGGAGAAGAGAGTTGACGGAATAGAGATAATTAATAATATGGCAGAATCAGGCGGCGGCAGAGGCGGAGTCAGGGCTTGCAACCAGAGCTGTGGTTGCGCAGTTCCCTGCCCCGGCGGCAACGCTTGTAGGTGCGCGACGGCCTCGGCACCGGCGCCGGCGGGAGGAGAGATGGCGCACGTGACATGCTCGTGCGGGGAGCACTGTGGGTGCAATCCCTGCACGTGTTCCAGCGCGGTGGTTGGAGTTGGGAAGGGTAACTGCAGGTGCGGCGAGAATTGTCGGTGTGAACCGTGCCGGTGTGAAACATGA

Coding sequence (CDS)

ATGAAAACTAATCGGACGGAAAAGGAGAAGAGAGTTGACGGAATAGAGATAATTAATAATATGGCAGAATCAGGCGGCGGCAGAGGCGGAGTCAGGGCTTGCAACCAGAGCTGTGGTTGCGCAGTTCCCTGCCCCGGCGGCAACGCTTGTAGGTGCGCGACGGCCTCGGCACCGGCGCCGGCGGGAGGAGAGATGGCGCACGTGACATGCTCGTGCGGGGAGCACTGTGGGTGCAATCCCTGCACGTGTTCCAGCGCGGTGGTTGGAGTTGGGAAGGGTAACTGCAGGTGCGGCGAGAATTGTCGGTGTGAACCGTGCCGGTGTGAAACATGA

Protein sequence

MKTNRTEKEKRVDGIEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET

Homology

[Close]

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot
Match: P93746 (Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 43/86 (50.00%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 21  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNP 80
           MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGEHCGCNP
Sbjct: 1   MADTGKG-SSVAGCNDSCGCPSPCPGGNSCRCRMREASA---GDQGHMVCPCGEHCGCNP 60

Query: 81  CTCSSAVVGVGKGNCRCGENCRCEPC 107
           C C           C CGE C C  C
Sbjct: 61  CNCPKTQTQTSAKGCTCGEGCTCASC 82

[Close]

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot
Match: P30570 (EC protein III OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 42/81 (51.85%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 34  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG-- 93
           CN  CGCAVPCPGG  CRC +A + A AG    H TC CGEHCGCNPC C       G  
Sbjct: 3   CNDKCGCAVPCPGGTGCRCTSARSDAAAG---EHTTCGCGEHCGCNPCACGREGTPSGRA 62

Query: 94  --KGNCRCGENCRCEPCRCET 111
             + NC CG  C C  C   T
Sbjct: 63  NRRANCSCGAACNCASCGSTT 80

[Close]

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot
Match: P43401 (EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 34  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG-- 93
           C+  CGCAVPCPGG  CRC + S     GG+  H TC CGEHC C+PCTC  A +  G  
Sbjct: 3   CDDKCGCAVPCPGGKDCRCTSGS-----GGQREHTTCGCGEHCECSPCTCGRATMPSGRE 62

Query: 94  --KGNCRCGENCRCEPC 107
             + NC CG +C C  C
Sbjct: 63  NRRANCSCGASCNCASC 74

[Close]

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot
Match: Q42377 (Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-16
Identity = 41/86 (47.67%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 21  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNP 80
           MA++G G     +CN  CGC  PCPGG +CRC   S    +GG+  H TC CGEHCGCNP
Sbjct: 1   MADTGKGSASA-SCNDRCGCPSPCPGGESCRCKMMS--EASGGDQEHNTCPCGEHCGCNP 60

Query: 81  CTCSSAVVGVGKGNCRCGENCRCEPC 107
           C C           C CGE C C  C
Sbjct: 61  CNCPKTQTQTSAKGCTCGEGCTCATC 83

[Close]

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot
Match: P30569 (EC protein I/II OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-15
Identity = 41/81 (50.62%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 34  CNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNPCTCSSAVVGVG-- 93
           C+  CGCAVPCPGG  CRC +A + A AG    H TC CGEHCGCNPC C       G  
Sbjct: 3   CDDKCGCAVPCPGGTGCRCTSARSGAAAG---EHTTCGCGEHCGCNPCACGREGTPSGRA 62

Query: 94  --KGNCRCGENCRCEPCRCET 111
             + NC CG  C C  C   T
Sbjct: 63  NRRANCSCGAACNCASCGSAT 80

[Close]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL
Match: A0A6J1FWF6 (metallothionein-like protein 4A OS=Cucurbita moschata OX=3662 GN=LOC111448775 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 21  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCN 80
           MAE GGG RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+
Sbjct: 1   MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATAT----AGGEVAHRQCPCGEHCGCD 60

Query: 81  PCTCSSAVVGVGKGNCRCGENCRCEPCRC 109
           PCTC SAVVGVGKG+CRCGE+CRCE CRC
Sbjct: 61  PCTCPSAVVGVGKGSCRCGEDCRCEICRC 85

[Close]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL
Match: A0A6J1J5Z9 (metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-32
Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 21  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCN 80
           MAE GGG RGG+RACNQ CGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+
Sbjct: 1   MAEPGGGERGGIRACNQRCGCAVPCPGGNACKCATAT----AGGEVAHRKCPCGEHCGCD 60

Query: 81  PCTCSSAVVGVGKGNCRCGENCRCEPCRC 109
           PCTC SAVVGVGKG+CRCGE+CRCE CRC
Sbjct: 61  PCTCPSAVVGVGKGSCRCGEDCRCEICRC 85

[Close]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL
Match: A0A6J1CGB3 (metallothionein-like protein 4A OS=Momordica charantia OX=3673 GN=LOC111011270 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29
Identity = 67/88 (76.14%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 21  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGC 80
           MAE+G  GG GG+RACNQSCGCAVPCPGGNACRCATA     AGG+ AH  C CGEHCGC
Sbjct: 1   MAEAGRRGGGGGIRACNQSCGCAVPCPGGNACRCATAKVET-AGGDAAHRWCPCGEHCGC 60

Query: 81  NPCTCSSAVVGVGKGNCRCGENCRCEPC 107
           NPCTC SAV GVGK  C+CGENCRCE C
Sbjct: 61  NPCTCPSAVAGVGKDFCKCGENCRCETC 87

[Close]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL
Match: A0A5D3CS48 (Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00240 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-29
Identity = 69/93 (74.19%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 21  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCG 80
           MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC 
Sbjct: 1   MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATA---AGGETAYNWRCPCGEHCD 60

Query: 81  CNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET 111
           CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Sbjct: 61  CNPCTCPRTEVGVGKGNCRCGQDCRCEVCRCES 90

[Close]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL
Match: A0A1S3BJL5 (metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-29
Identity = 69/93 (74.19%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 21  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCG 80
           MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC 
Sbjct: 1   MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATA---AGGETAYNWRCPCGEHCD 60

Query: 81  CNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET 111
           CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Sbjct: 61  CNPCTCPRTEVGVGKGNCRCGQDCRCEVCRCES 90

[Close]

BLAST of Lsi10G001290 vs. NCBI nr
Match: XP_022944284.1 (metallothionein-like protein 4A [Cucurbita moschata] >KAG6570975.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010813.1 Metallothionein-like protein 4A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = 0


Query: 21  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCN 80
           MAE GGG RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+
Sbjct: 1   MAEPGGGERGGIRACNQSCGCAVPCPGGNACKCATAT----AGGEVAHRQCPCGEHCGCD 60

Query: 81  PCTCSSAVVGVGKGNCRCGENCRCEPCRC 109
           PCTC SAVVGVGKG+CRCGE+CRCE CRC
Sbjct: 61  PCTCPSAVVGVGKGSCRCGEDCRCEICRC 85

[Close]

BLAST of Lsi10G001290 vs. NCBI nr
Match: XP_023513130.1 (metallothionein-like protein 4A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-32
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 21  MAESGGG--RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGC 80
           MAE GGG  RGG+RACNQSCGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC
Sbjct: 1   MAEPGGGGVRGGIRACNQSCGCAVPCPGGNACKCATAT----AGGEVAHRQCPCGEHCGC 60

Query: 81  NPCTCSSAVVGVGKGNCRCGENCRCEPCRC 109
           +PCTC SAVVGVG+G CRCGE+CRCE CRC
Sbjct: 61  DPCTCPSAVVGVGRGKCRCGEDCRCEICRC 86

[Close]

BLAST of Lsi10G001290 vs. NCBI nr
Match: XP_022985832.1 (metallothionein-like protein 4B [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 8.7e-32
Identity = 70/89 (78.65%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 21  MAESGGG-RGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCN 80
           MAE GGG RGG+RACNQ CGCAVPCPGGNAC+CATA+    AGGE+AH  C CGEHCGC+
Sbjct: 1   MAEPGGGERGGIRACNQRCGCAVPCPGGNACKCATAT----AGGEVAHRKCPCGEHCGCD 60

Query: 81  PCTCSSAVVGVGKGNCRCGENCRCEPCRC 109
           PCTC SAVVGVGKG+CRCGE+CRCE CRC
Sbjct: 61  PCTCPSAVVGVGKGSCRCGEDCRCEICRC 85

[Close]

BLAST of Lsi10G001290 vs. NCBI nr
Match: XP_022140669.1 (metallothionein-like protein 4A [Momordica charantia])

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-29
Identity = 67/88 (76.14%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 21  MAESG--GGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGC 80
           MAE+G  GG GG+RACNQSCGCAVPCPGGNACRCATA     AGG+ AH  C CGEHCGC
Sbjct: 1   MAEAGRRGGGGGIRACNQSCGCAVPCPGGNACRCATAKVET-AGGDAAHRWCPCGEHCGC 60

Query: 81  NPCTCSSAVVGVGKGNCRCGENCRCEPC 107
           NPCTC SAV GVGK  C+CGENCRCE C
Sbjct: 61  NPCTCPSAVAGVGKDFCKCGENCRCETC 87

[Close]

BLAST of Lsi10G001290 vs. NCBI nr
Match: XP_008448405.1 (PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothionein-like protein 4A [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-29
Identity = 69/93 (74.19%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 21  MAESGG--GRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAH-VTCSCGEHCG 80
           MAE GG  GRGGV ACNQSCGCAVPCPGGNACRC+TA+A   AGGE A+   C CGEHC 
Sbjct: 1   MAEPGGLSGRGGVGACNQSCGCAVPCPGGNACRCSTATA---AGGETAYNWRCPCGEHCD 60

Query: 81  CNPCTCSSAVVGVGKGNCRCGENCRCEPCRCET 111
           CNPCTC    VGVGKGNCRCG++CRCE CRCE+
Sbjct: 61  CNPCTCPRTEVGVGKGNCRCGQDCRCEVCRCES 90

[Close]

BLAST of Lsi10G001290 vs. TAIR 10
Match: AT2G42000.1 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 90.5 bits (223), Expect = 9.1e-19
Identity = 43/92 (46.74%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 15  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGE 74
           + +   MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGE
Sbjct: 26  LRLKTKMADTGKG-SSVAGCNDSCGCPSPCPGGNSCRCRMREASA---GDQGHMVCPCGE 85

Query: 75  HCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC 107
           HCGCNPC C           C CGE C C  C
Sbjct: 86  HCGCNPCNCPKTQTQTSAKGCTCGEGCTCASC 113

[Close]

BLAST of Lsi10G001290 vs. TAIR 10
Match: AT2G42000.2 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 90.5 bits (223), Expect = 9.1e-19
Identity = 43/92 (46.74%), Postives = 50/92 (54.35%), Query Frame = 0


Query: 15  IEIINNMAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGE 74
           + +   MA++G G   V  CN SCGC  PCPGGN+CRC    A A   G+  H+ C CGE
Sbjct: 31  LRLKTKMADTGKG-SSVAGCNDSCGCPSPCPGGNSCRCRMREASA---GDQGHMVCPCGE 90

Query: 75  HCGCNPCTCSSAVVGVGKGNCRCGENCRCEPC 107
           HCGCNPC C           C CGE C C  C
Sbjct: 91  HCGCNPCNCPKTQTQTSAKGCTCGEGCTCASC 118

[Close]

BLAST of Lsi10G001290 vs. TAIR 10
Match: AT2G23240.1 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 85.1 bits (209), Expect = 3.8e-17
Identity = 41/86 (47.67%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 21  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNP 80
           MA++G G     +CN  CGC  PCPGG +CRC   S    +GG+  H TC CGEHCGCNP
Sbjct: 1   MADTGKGSASA-SCNDRCGCPSPCPGGESCRCKMMS--EASGGDQEHNTCPCGEHCGCNP 60

Query: 81  CTCSSAVVGVGKGNCRCGENCRCEPC 107
           C C           C CGE C C  C
Sbjct: 61  CNCPKTQTQTSAKGCTCGEGCTCATC 83

[Close]

BLAST of Lsi10G001290 vs. TAIR 10
Match: AT2G23240.2 (Plant EC metallothionein-like protein, family 15 )

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 21  MAESGGGRGGVRACNQSCGCAVPCPGGNACRCATASAPAPAGGEMAHVTCSCGEHCGCNP 80
           MA++G G     +CN  CGC  PCPGG +CR   + A   +GG+  H TC CGEHCGCNP
Sbjct: 1   MADTGKGSASA-SCNDRCGCPSPCPGGESCRLMMSEA---SGGDQEHNTCPCGEHCGCNP 60

Query: 81  CTCSSAVVGVGKGNCRCGENCRCEPC 107
           C C           C CGE C C  C
Sbjct: 61  CNCPKTQTQTSAKGCTCGEGCTCATC 82

The following BLAST results are available for this feature:

BLAST of Lsi10G001290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93746	2.2e-17	50.00	Metallothionein-like protein 4A OS=Arabidopsis thaliana OX=3702 GN=MT4A PE=2 SV=...	[more]
P30570	4.1e-16	51.85	EC protein III OS=Triticum aestivum OX=4565 PE=2 SV=2	[more]
P43401	4.1e-16	50.65	EC protein homolog OS=Zea mays OX=4577 PE=3 SV=2	[more]
Q42377	5.4e-16	47.67	Metallothionein-like protein 4B OS=Arabidopsis thaliana OX=3702 GN=MT4B PE=2 SV=...	[more]
P30569	2.0e-15	50.62	EC protein I/II OS=Triticum aestivum OX=4565 PE=1 SV=2	[more]

BLAST of Lsi10G001290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWF6	1.1e-32	79.78	metallothionein-like protein 4A OS=Cucurbita moschata OX=3662 GN=LOC111448775 PE...	[more]
A0A6J1J5Z9	4.2e-32	78.65	metallothionein-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111483762 PE=4...	[more]
A0A6J1CGB3	2.0e-29	76.14	metallothionein-like protein 4A OS=Momordica charantia OX=3673 GN=LOC111011270 P...	[more]
A0A5D3CS48	2.6e-29	74.19	Metallothionein-like protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BJL5	2.6e-29	74.19	metallothionein-like protein 4A OS=Cucumis melo OX=3656 GN=LOC103490606 PE=4 SV=...	[more]

BLAST of Lsi10G001290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944284.1	2.3e-32	79.78	metallothionein-like protein 4A [Cucurbita moschata] >KAG6570975.1 Metallothione...	[more]
XP_023513130.1	8.7e-32	77.78	metallothionein-like protein 4A [Cucurbita pepo subsp. pepo]	[more]
XP_022985832.1	8.7e-32	78.65	metallothionein-like protein 4B [Cucurbita maxima]	[more]
XP_022140669.1	4.1e-29	76.14	metallothionein-like protein 4A [Momordica charantia]	[more]
XP_008448405.1	5.3e-29	74.19	PREDICTED: metallothionein-like protein 4A [Cucumis melo] >TYK14631.1 metallothi...	[more]

BLAST of Lsi10G001290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42000.1	9.1e-19	46.74	Plant EC metallothionein-like protein, family 15	[more]
AT2G42000.2	9.1e-19	46.74	Plant EC metallothionein-like protein, family 15	[more]
AT2G23240.1	3.8e-17	47.67	Plant EC metallothionein-like protein, family 15	[more]
AT2G23240.2	1.9e-16	46.51	Plant EC metallothionein-like protein, family 15	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000316	Plant EC metallothionein-like protein, family 15	PRINTS	PR00877	MTPLANTPEC	coord: 41..47 score: 92.86 coord: 48..55 score: 46.88 coord: 33..41 score: 61.11
IPR000316	Plant EC metallothionein-like protein, family 15	PFAM	PF02068	Metallothio_PEC	coord: 34..106 e-value: 1.1E-18 score: 67.3
None	No IPR available	PANTHER	PTHR48198	EC PROTEIN HOMOLOG	coord: 30..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G001290.1	Lsi10G001290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding