Homology
BLAST of Lsi10G001180 vs. ExPASy Swiss-Prot
Match:
P79051 (ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rhp16 PE=3 SV=2)
HSP 1 Score: 417.9 bits (1073), Expect = 2.6e-115
Identity = 297/887 (33.48%), Postives = 436/887 (49.15%), Query Frame = 0
Query: 5 PRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEV------LSSSSEDSSEPSTKKSR 64
P ++ + I+ + + + DI+ F DS E+ S+ S++ S P + +S+
Sbjct: 129 PEESNESEFIDDDESDEVASIIDIKEDETF-DSKVEIPEAAPSSSTESDEESIPLSYQSK 188
Query: 65 AKTQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKP 124
+ R S + ++ + E H Y+ + ++ P+
Sbjct: 189 RRRVSARASSSASSSSRTQAKSIPSHERTH--------YRLI------------RQHPEL 248
Query: 125 TLLWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQ 184
+W EEE R + + +E P L + LL +Q+E + W +Q
Sbjct: 249 EHVWEKLEEEAPREVKQ------------------IEQPKELVLNLLPFQREGVYWLKRQ 308
Query: 185 EDSSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVI 244
EDSS GGILADEMGMGKTIQ IAL+L++ P K TLV+
Sbjct: 309 EDSSFGGGILADEMGMGKTIQTIALLLSE----------------------PRGKPTLVV 368
Query: 245 CPVVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHL 304
PVVA+ QW EID T+K + +Y+G R + E LS YD V+T+Y+V+E+ YRK
Sbjct: 369 APVVAIMQWKEEIDTHTNK-ALSTYLYYGQARDISGEELSSYDVVLTSYNVIESVYRK-- 428
Query: 305 MPPKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDK 364
++
Sbjct: 429 ----------------------------------------------------------ER 488
Query: 365 NNTVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAV 424
+ K+G K KS+LH + + R+ILDEAH IK R NTA+AV
Sbjct: 489 SGFRRKNGVVKE-----------------KSLLHQMEFYRIILDEAHGIKSRTCNTARAV 548
Query: 425 LAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTL-----DHSSLTC 484
+ ++ + LSGTP+QNR+GEL+SL+RFL+ P+++Y+C C+C++L D S+ C
Sbjct: 549 CGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSN--C 608
Query: 485 PNCPHKRVRHFCWWNKNITVRIQNFG-RGPEFQRGMILLK--HKILSSIVLRRTKKGRAA 544
C HK + H C++N + IQ FG GP G + K H +L I+LRRTK RA
Sbjct: 609 DECGHKPMSHTCYFNAEMLKPIQKFGYEGP----GKLAFKKVHSLLKHIMLRRTKLERAD 668
Query: 545 DLALPPSIA--------------------------------------------------- 604
DL LPP +
Sbjct: 669 DLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQ 728
Query: 605 -VNHPYLVVYSKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHT 664
+HP LV+ SK + D +N VC IC E A++ + + C HTFC+ C+ ++
Sbjct: 729 MADHPDLVLASKRKTV------DIENQENIVCKICDEVAQDAIESRCHHTFCRLCVTEYI 788
Query: 665 N--DFLKSVACPSCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKI 724
N ++V CPSC L+ID ++ A+ D + + FK++SILNRI + ++++STKI
Sbjct: 789 NAAGDGENVNCPSCFIPLSIDL-SAPALEDFSEEK----FKNASILNRIDMNSWRSSTKI 848
Query: 725 EALREEIRFMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAIN 784
EAL EE+ + ++D + K IVFSQFTS LDL+++ L K+G CV+L G M+ R I
Sbjct: 849 EALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIE 859
Query: 785 RFIEDPDCKIFLMSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI 824
F D + IFL+SLKAGGVALNLT AS VF+MDPWWN AV+ QA DRIHRIGQ +PI++
Sbjct: 909 AFSNDINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKV 859
BLAST of Lsi10G001180 vs. ExPASy Swiss-Prot
Match:
P31244 (DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD16 PE=1 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 9.9e-115
Identity = 283/819 (34.55%), Postives = 406/819 (49.57%), Query Frame = 0
Query: 84 DENLHNQKP------EIADYQGVDDIEKPKTK-------------YSRKKKPKPTLLWNV 143
DEN H K EI + + V D ++P TK ++KK PK T
Sbjct: 86 DENTHAIKNDNDEIIEIKEERDVSDDDEPLTKKRKTTARKKKKKTSTKKKSPKVTPYERN 145
Query: 144 WEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSIK 203
YE E + DL + + + + P +T+ LL +Q E L W + QE+S
Sbjct: 146 TLRLYEHH-PELRNVFTDLKNAPPYVPQRSKQPDGMTIKLLPFQLEGLHWLISQEESIYA 205
Query: 204 GGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICPVVAV 263
GG+LADEMGMGKTIQ IAL++ K PS LV+ P VA+
Sbjct: 206 GGVLADEMGMGKTIQTIALLMNDL-------TKSPS---------------LVVAPTVAL 265
Query: 264 SQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPKDR 323
QW +EI++ T KG K+ +YHG R +++ L YD V+TTY+V+E+ +RK
Sbjct: 266 MQWKNEIEQHT-KGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVFRKQ------- 325
Query: 324 CPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHK 383
+ F +KN K+P
Sbjct: 326 ----NYGFRRKNGLF---------------------KQP--------------------- 385
Query: 384 SGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSS 443
S+LH++ + RVILDEAH IKDR SNTA+AV + +
Sbjct: 386 ------------------------SVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQ 445
Query: 444 FRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLD---HSSLTCPNCPHKRV 503
RW LSGTP+QNR+GE+YSL+RFL I P++ YFC CDC + D + C +C H +
Sbjct: 446 KRWCLSGTPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIM 505
Query: 504 RHFCWWNKNITVRIQNFG-RGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSIA- 563
+H ++N + IQ FG GP + + +L +I+LRRTK RA DL LPP I
Sbjct: 506 QHTNFFNHFMLKNIQKFGVEGPGLESFNNI--QTLLKNIMLRRTKVERADDLGLPPRIVT 565
Query: 564 ---------------------------------------------------VNHPYLVVY 623
+HP LV+
Sbjct: 566 VRRDFFNEEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDLVLK 625
Query: 624 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKS---V 683
N D+ +C +C++ AEEP+ + C H FC+ CI ++ F+++ +
Sbjct: 626 RLNNF-------PGDDIGVVICQLCNDEAEEPIESKCHHKFCRLCIKEYVESFMENNNKL 685
Query: 684 ACPSCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLE-NFQTSTKIEALREEIR 743
CP C L+ID + ++ + FK SI++R+ + +Q+STKIEAL EE+
Sbjct: 686 TCPVCHIGLSID------LSQPALEVDLDSFKKQSIVSRLNMSGKWQSSTKIEALVEELY 745
Query: 744 FMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDC 803
+ + K IVFSQFTS LDL+ + L ++G V+L GSMS +QR + I F+ + C
Sbjct: 746 KLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQC 788
Query: 804 KIFLMSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENS 824
++FL+SLKAGGVALNL AS VFI+DPWWNP+VE Q+ DR+HRIGQY+P++ITRF IE+S
Sbjct: 806 EVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDS 788
BLAST of Lsi10G001180 vs. ExPASy Swiss-Prot
Match:
Q9LHE4 (Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana OX=3702 GN=CHR27 PE=1 SV=1)
HSP 1 Score: 275.0 bits (702), Expect = 2.7e-72
Identity = 234/857 (27.30%), Postives = 365/857 (42.59%), Query Frame = 0
Query: 134 DENIDKDFDLASQ------NEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSIK--G 193
D N D D L Q N+ +TE+ P L++PL+R+QK LAW ++E SS G
Sbjct: 245 DRNPDNDERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPG 304
Query: 194 GILADEMGMGKTIQAIALVLAKR---QLSGTAGLK------------------------- 253
GILAD+ G+GKT+ IAL+L ++ QL + K
Sbjct: 305 GILADDQGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNAKHESGSHV 364
Query: 254 RPSPYPSSSKDLPLIKA----------------------------------TLVICPVVA 313
+P SS+ + ++ A TL++CP
Sbjct: 365 KPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPAAGTLIVCPASV 424
Query: 314 VSQWVSEIDRFTSKGS-YKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPK 373
V QW E+D S+ S VLVYHG R ++ L+EYD V+TTY++V + + +
Sbjct: 425 VRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNEAPNKFLVDE 484
Query: 374 DRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTV 433
D E K + + S N K V
Sbjct: 485 D-----------------------------ENDEKNTDRYGLASGFSN-----NKKRKVV 544
Query: 434 HKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAIS 493
+ + G+ + E CG L V W R++LDEA IK+ + A++ +
Sbjct: 545 VGASKKSKRRGRKSTNDTSSEPDCGP--LGKVGWFRIVLDEAQTIKNYRTQMARSCCTLR 604
Query: 494 SSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKRVR 553
+ RW LSGTPIQN + +LYS RFL+ PY+ Y +S++ P R
Sbjct: 605 AKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVY--------KSFYSTIKVPIS-----R 664
Query: 554 HFCWWNKNITVRIQNF----GRGPEFQ-RGMILLKHKILS------SIVLRRTKKGRAAD 613
+ C K + ++ +G + +I L K+++ S+ R K AD
Sbjct: 665 NSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEAD 724
Query: 614 -----------------------LALPPSIAVNHPYLVVYSKTNAISCGSIGDSD----- 673
L L A +HP LV + N+ G + ++
Sbjct: 725 SRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV--KRYNSDPVGKVSEAAVRRLP 784
Query: 674 -----------NNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSK 733
++ +C C+EP E+PVVT C H FC C++++ + P C +
Sbjct: 785 REARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQ 844
Query: 734 MLTIDFRTSLAVGDQTIKNTIKGFK--SSSILNRIQLENFQ----TSTKIEALREEIRFM 793
L D + + +++N SSS N + FQ S+KI+A+ + ++ +
Sbjct: 845 QLARD----VVFSESSLRNCTSDDSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSL 904
Query: 794 FERD-------------------------------------GSAKGIVFSQFTSFLDLMN 825
+ D G+ K I+FSQ+T LDL+
Sbjct: 905 SQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVE 964
BLAST of Lsi10G001180 vs. ExPASy Swiss-Prot
Match:
Q94BR5 (Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana OX=3702 GN=CHR28 PE=1 SV=1)
HSP 1 Score: 271.2 bits (692), Expect = 3.9e-71
Identity = 224/841 (26.63%), Postives = 353/841 (41.97%), Query Frame = 0
Query: 127 EEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSI--K 186
EE DE + L N+ +E L++PL+++QK LAW ++E +S+
Sbjct: 189 EERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSLHCM 248
Query: 187 GGILADEMGMGKTIQAIALVLAKRQ----------------------------------- 246
GGILAD+ G+GKT+ IAL+L +
Sbjct: 249 GGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKPESK 308
Query: 247 ------LSGTAGLKRPSPYPSSSKDLPLIK-----ATLVICPVVAVSQWVSEID-RFTSK 306
++G +G+K+ +S+ + TL++CP V QW E+D + T +
Sbjct: 309 ASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDE 368
Query: 307 GSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPKDRCPYCSKLFYKKNL 366
VL+YHG R ++ L++YD V+TTY++V + K + D
Sbjct: 369 AKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDD-------------- 428
Query: 367 KIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHKSGSQKSALGQTMG 426
E K K + S+N K V G+ K + +
Sbjct: 429 ---------------ENDEKNSEKYGLASGF-----SINKKRKNV--VGTTKKSKKKKGN 488
Query: 427 QHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFRWALSGTPIQNR 486
+ D L V W RV+LDEA IK+ + A+A + + RW LSGTPIQN
Sbjct: 489 NNAGDSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNT 548
Query: 487 VGELYSLVRFLQIVPYSFY--FCKDCDCRTLDHSSL------------------------ 546
+ +LYS RFL+ PY+ Y FC + +SL
Sbjct: 549 IDDLYSYFRFLKYDPYAVYKSFCHQIK-GPISRNSLQGYKKLQAVLRAIMLRRTKGTLLD 608
Query: 547 --TCPNCPHKRVR----HFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTK 606
N P K + F ++ V++++ R ++ ++I+L +
Sbjct: 609 GQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLR 668
Query: 607 KGRAADLALPPSIAVNHPYLVVYSKTNAISCGSIGD---------------SDNNNKQVC 666
+A D HP LV + N+ S G + + S + +C
Sbjct: 669 LRQACD----------HPQLV--KRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESSPIC 728
Query: 667 GICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSKMLTID-------FRTSLA 726
+CH+P E+PVVT C H FC C+ D+ + P C + L D R+ +A
Sbjct: 729 CVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSKSTLRSCVA 788
Query: 727 -----------VGDQTI--KNTIKGFKSSSILNRIQ-LENFQTSTKIE------------ 786
D+++ K ++L+ +Q L N TS +
Sbjct: 789 DDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPN 848
Query: 787 ------------ALREEIRFMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGS 825
+ ++ G K I+FSQ+T LDL+ SL ++ I +L G+
Sbjct: 849 DDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDGT 908
BLAST of Lsi10G001180 vs. ExPASy Swiss-Prot
Match:
O60177 (Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC23E6.02 PE=3 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 2.4e-68
Identity = 228/770 (29.61%), Postives = 343/770 (44.55%), Query Frame = 0
Query: 135 ENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSIKGGILADEMGM 194
E + KD D N+ T TP+ L L+ +QKE L W + E+SS KGGILAD+MG+
Sbjct: 362 EELFKDLDEQLVNDP-TIREGTPAGLIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGL 421
Query: 195 GKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICPVVAVSQWVSEI-DR 254
GKT+QA+AL++ + P SK +K TL+I PV + QW +EI +
Sbjct: 422 GKTVQALALLVTR---------------PPESKS---VKTTLIITPVSLLQQWHNEILTK 481
Query: 255 FTSKGSYKVLVYHG-PKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPKDRCPYCSKLF 314
V ++HG K+ + E L YD V+TTY+V+ +++ +K+
Sbjct: 482 IAPSHRPTVYIHHGSSKKHKIAEQLMSYDIVLTTYNVIAYEFK-------------NKMA 541
Query: 315 YKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHKSGSQKSAL 374
Y K++ + PI KK E +
Sbjct: 542 YDKSI---------------------EDNAPI-----KKFEHLP---------------- 601
Query: 375 GQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFRWALSGT 434
W RVILDEA IK+R + A+ + S++RW LSGT
Sbjct: 602 ------------------FFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGT 661
Query: 435 PIQNRVGELYSLVRFLQIVPYSFY--FCKDCDCRTLDHSSLTCPNCPHKRVRH-----FC 494
P+QN V E YSL++FL+I PYS + F KD T+ SS + P KR R
Sbjct: 662 PMQNGVEEFYSLIKFLRIKPYSDWSSFSKDF---TIPLSSNINTSAPMKRFRGLLKAVLL 721
Query: 495 WWNKNITVRIQNFGRGP----------------EF----QRGMILLKHKILSSIVLRRTK 554
KN + + P EF Q G + K L + T
Sbjct: 722 RRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTI-TTH 781
Query: 555 KGRAADLALPPSIAVNHPYLVV------------YSKTNAISCGSIGDSDNNNKQV---- 614
G L L A HP+L+V +K AI ++ N K +
Sbjct: 782 YGSLLVLLLRLRQACCHPWLIVAREAAVDDNDSFQAKNRAIYNQIYPEAVNRLKLIETLQ 841
Query: 615 CGICHE-PAEEPVVTSCEHTFCKAC---IIDHTNDFLK-------SVACPSCSKMLTIDF 674
C +C + AE ++ C H C+ C +I + D K S C C + + +
Sbjct: 842 CSLCMDVVAELLIIVPCGHFLCRECLTHVITSSEDMAKQTSNENISPKCSVCEEYIDTER 901
Query: 675 RTSLAV------------GDQTIK----NTIKGFKSSSILNRIQL--------ENFQTST 734
S A+ D ++ + + + S+IL Q+ +++ TST
Sbjct: 902 LLSYALFRRYSGMAPIVDADNKLRTENISELLPKQYSNILENRQMGMKIFTDPKHWTTST 961
Query: 735 KIEALREEIRFMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDA 794
KIE ++ + ++ + K ++FSQF SFL+L + GI + G +S ++R A
Sbjct: 962 KIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQA 1021
Query: 795 INRFIEDPDCKIFLMSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPI 824
+ F DP+ ++ L+SLKAG V LNLT A+HV I+DP+WNP +E QA DR HRIGQ KP+
Sbjct: 1022 LINFEVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPV 1035
BLAST of Lsi10G001180 vs. ExPASy TrEMBL
Match:
A0A0A0LN53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416820 PE=3 SV=1)
HSP 1 Score: 1431.8 bits (3705), Expect = 0.0e+00
Identity = 731/876 (83.45%), Postives = 773/876 (88.24%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK SNVLIE G+ DGD DDI+VSSL SD GSE LSSSSED SE STKKSRA+
Sbjct: 1 MKLRPRKPASNVLIE-EGNVDGDFSDDIDVSSLVSDCGSEDLSSSSEDFSEHSTKKSRAR 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
TQ+KRIKK+GPSIEQEVGSNVGNDENL+N +PEIAD QGV DIEKPKTKYSRKKK KPTL
Sbjct: 61 TQKKRIKKDGPSIEQEVGSNVGNDENLNNPRPEIADSQGVVDIEKPKTKYSRKKKTKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWN+WEEEYERWIDENI+KDFDLA+QNEV EAVETP+ALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNIWEEEYERWIDENIEKDFDLANQNEVFAEAVETPAALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGL+RPS PSSSKDLPLIKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKDLPLIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTS+GSYKVLVYHGPKR R+LE+LSEYDFVITTYSVVEADYRK+LMP
Sbjct: 241 VVAVSQWVSEIDRFTSEGSYKVLVYHGPKRERSLEVLSEYDFVITTYSVVEADYRKYLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQQRKRPIQPQI K+E+S DKNN
Sbjct: 301 PKDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHKSG QKS LGQT+ +HENDEK G SILHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKSGGQKSTLGQTVEEHENDEKHRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNI+ RIQNFGRGPEF+RGMILLKHKILS+IVLRRTKKGRAADLALPPS
Sbjct: 481 VRHFCWWNKNISQRIQNFGRGPEFKRGMILLKHKILSTIVLRRTKKGRAADLALPPSTVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKTNAI+ G+I DSD+NNKQVCGIC+EPAEEPV TSC+HTFCKAC+ID+ DF K V+CP
Sbjct: 601 SKTNAINSGNIDDSDSNNKQVCGICYEPAEEPVDTSCKHTFCKACLIDYAGDFSKPVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLT DF TS+A DQT+KN IKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTSDFITSMAFKDQTVKNKIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSL+KSGITCVQLVGSMSL+QR DAINRFIEDPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEER
Sbjct: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEER 840
BLAST of Lsi10G001180 vs. ExPASy TrEMBL
Match:
A0A5D3DZG8 (DNA repair protein RAD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3695G00010 PE=3 SV=1)
HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 732/876 (83.56%), Postives = 774/876 (88.36%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK SNVLIE G+ DGD+ DDI+V SD GSE SSSSED SE STKKSRA+
Sbjct: 1 MKLRPRKPASNVLIE-EGNVDGDSSDDIDV----SDCGSEDHSSSSEDFSEHSTKKSRAR 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
TQ+KRIKK+GPSIEQEVGSNVGNDENL+NQKPEIAD QGV +IEKPKTKYSR KKPKPTL
Sbjct: 61 TQKKRIKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSR-KKPKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWN+WEEEYERWIDENI+KDFDLA+QNEVL E+VETP+ALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNIWEEEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGL+RPS PSSSK+LPLIKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTS+GSYKVLVYHGPKRVR+LEILSEYDFVITTYSVVEADYRK+LMP
Sbjct: 241 VVAVSQWVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQQRKRPIQPQI K+E+S DKNN
Sbjct: 301 PKDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHKSG+QKS LGQT+G+HENDEKP G SILHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKSGAQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS TCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNIT RIQNFGRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPS
Sbjct: 481 VRHFCWWNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKT AI+ G+I DSD+NNKQVCG+CHEPAEEPV TSC+H FCKACIID+ DF K V+CP
Sbjct: 601 SKTKAINSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLT DF TS+A DQT+KNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSL+KSGITCVQLVGSMSL+QR DAINRFIEDPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEER
Sbjct: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEER 840
BLAST of Lsi10G001180 vs. ExPASy TrEMBL
Match:
A0A1S3C1J5 (DNA repair protein RAD16 OS=Cucumis melo OX=3656 GN=LOC103495970 PE=3 SV=1)
HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 732/876 (83.56%), Postives = 774/876 (88.36%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK SNVLIE G+ DGD+ DDI+V SD GSE SSSSED SE STKKSRA+
Sbjct: 1 MKLRPRKPASNVLIE-EGNVDGDSSDDIDV----SDCGSEDHSSSSEDFSEHSTKKSRAR 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
TQ+KRIKK+GPSIEQEVGSNVGNDENL+NQKPEIAD QGV +IEKPKTKYSR KKPKPTL
Sbjct: 61 TQKKRIKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSR-KKPKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWN+WEEEYERWIDENI+KDFDLA+QNEVL E+VETP+ALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNIWEEEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGL+RPS PSSSK+LPLIKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTS+GSYKVLVYHGPKRVR+LEILSEYDFVITTYSVVEADYRK+LMP
Sbjct: 241 VVAVSQWVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQQRKRPIQPQI K+E+S DKNN
Sbjct: 301 PKDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHKSG+QKS LGQT+G+HENDEKP G SILHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKSGAQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS TCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNIT RIQNFGRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPS
Sbjct: 481 VRHFCWWNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKT AI+ G+I DSD+NNKQVCG+CHEPAEEPV TSC+H FCKACIID+ DF K V+CP
Sbjct: 601 SKTKAINSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLT DF TS+A DQT+KNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSL+KSGITCVQLVGSMSL+QR DAINRFIEDPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEER
Sbjct: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEER 840
BLAST of Lsi10G001180 vs. ExPASy TrEMBL
Match:
A0A6J1FYD3 (DNA repair protein RAD16 OS=Cucurbita moschata OX=3662 GN=LOC111448500 PE=3 SV=1)
HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 712/876 (81.28%), Postives = 758/876 (86.53%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK TSN+LI+GN DGDA D+I+VSSL+SDS SE SSSSED EPSTKKSRAK
Sbjct: 1 MKLRPRKPTSNILIQGN--ADGDASDEIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAK 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
+RK IK+EGPSIEQEV VGNDEN HNQ PE+ QGV DI KPKTKYSRKKK KP L
Sbjct: 61 KKRKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPIL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LW+VW EE+ERWIDENI+KDFD+ASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
S ++GGILADEMGMGKTIQAIALVLAKR+LSG AGL+RPSPYPSSSKD PLIKATLV+CP
Sbjct: 181 SPVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
V+AVSQWVSEIDRFT KGS KV V+HGPKR ++LE L E+DFVITTYSVVEA+YRKHLMP
Sbjct: 241 VIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLFYKKNLKIHL+YICGPDAVKTEKQAKQ RKRPIQPQISK E S DKNN
Sbjct: 301 PKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
H SGSQKS GQTMGQHENDE PCGKSILHSVIWDR+ILDEAHFIKDR SNTAKAVLA
Sbjct: 361 NFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRIILDEAHFIKDRQSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS++CP+CPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
+RHFCWWNK IT++IQN GRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPSI
Sbjct: 481 MRHFCWWNKYITLQIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
S+TN ISCGSI +DNNN+Q CGICHEPAEEPVVTSCEHTFCKACII NDF K V+CP
Sbjct: 601 SRTNVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLTIDF T+LA D+TIKNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM E
Sbjct: 661 SCSKMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSLTKSGITCVQL+GSMSL QR DAI RFI+DPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRF+IENSIEER
Sbjct: 781 MSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEER 840
BLAST of Lsi10G001180 vs. ExPASy TrEMBL
Match:
A0A6J1J723 (DNA repair protein RAD16 OS=Cucurbita maxima OX=3661 GN=LOC111484062 PE=3 SV=1)
HSP 1 Score: 1397.5 bits (3616), Expect = 0.0e+00
Identity = 713/876 (81.39%), Postives = 754/876 (86.07%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK TSN+LI+GN DGDA DDI+VSSLFSDS SE SSSSED EPSTKKSRAK
Sbjct: 1 MKLRPRKPTSNILIQGN--ADGDASDDIDVSSLFSDSESEDPSSSSEDFCEPSTKKSRAK 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
+RK IK+EGPSIEQEV VGND N HNQ PE+ QGV DI KPK KYSRKKK KP L
Sbjct: 61 KKRKGIKEEGPSIEQEVWRKVGNDGNPHNQTPEVIPVQGVVDIGKPKAKYSRKKKQKPIL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LW+VW EE+ERWIDENI+KDFD+ASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
S ++GGILADEMGMGKTIQAIALVLAKR+LSG AGL+RPSPYPSSSKD PLIKATLV+CP
Sbjct: 181 SPVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
V+AVSQWVSEIDRFT KGS KV V+HGPKR ++LE L E+DFVITTYSVVEA+YRKHLMP
Sbjct: 241 VIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLFYKKNLKIHL+YICGPDAVKTEKQAKQ RKRPIQPQ+SK E S DKNN
Sbjct: 301 PKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQLSKGEVSAKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
H SGSQKS GQTMGQHENDE PCGKSILHSVIWDRVILDEAHFIKDR SNTAKAVLA
Sbjct: 361 NFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS++CP+CPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
+RHFCWWNK IT+RIQN GRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPSI
Sbjct: 481 MRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
S+TN ISCGSI +DNNN+ CGICHEPAEEPVVTSCEHTFCKACII NDF K V+CP
Sbjct: 601 SRTNVISCGSIDGTDNNNEHACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSK LTIDF T+LA DQTIKNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM E
Sbjct: 661 SCSKKLTIDFSTNLAGRDQTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSLTKSGITCVQL+GSMSL QR DAI RFI+DPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRF+IENSIEER
Sbjct: 781 MSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEER 840
BLAST of Lsi10G001180 vs. NCBI nr
Match:
XP_038902046.1 (ATP-dependent helicase rhp16 [Benincasa hispida])
HSP 1 Score: 1498.0 bits (3877), Expect = 0.0e+00
Identity = 761/876 (86.87%), Postives = 792/876 (90.41%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRKTTSNV IEGN GD DA DDI+VSSL SDSG EVLSSSSEDS EPS KKSRAK
Sbjct: 1 MKLRPRKTTSNVFIEGN--GDRDASDDIDVSSLVSDSGCEVLSSSSEDSGEPSIKKSRAK 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
T+RKRIKKEGPSIEQEVGSNVGNDEN+HNQKPEIA+ QGV DIEKPKTKYSRKKKPKPTL
Sbjct: 61 TRRKRIKKEGPSIEQEVGSNVGNDENIHNQKPEIANSQGVVDIEKPKTKYSRKKKPKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWNVWEEEYERWIDENI+KDFDLA+QNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNVWEEEYERWIDENIEKDFDLANQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGT+GL+RPS +PSSSKDLP IKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTSGLRRPSTHPSSSKDLPSIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRV++LEILSEYDFVITTYSVVEADYRKHLMP
Sbjct: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVQSLEILSEYDFVITTYSVVEADYRKHLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYC+KLFYKK LK HL YICGPDAVKTEKQAKQQRKRPIQPQI K+EES KNN
Sbjct: 301 PKDRCPYCNKLFYKKKLKFHLMYICGPDAVKTEKQAKQQRKRPIQPQIYKQEESAKGKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHK G QKS LGQTMGQ+ENDEKPCGKS+LHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKRGGQKSTLGQTMGQNENDEKPCGKSVLHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSL+RFLQIVPYSFYFCKDCDCRTLDHSS TCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLIRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNIT+RIQNFGRGPEF+RGMILLKHKILSS VLRRTKKGRAA+LALPPSI
Sbjct: 481 VRHFCWWNKNITLRIQNFGRGPEFKRGMILLKHKILSSTVLRRTKKGRAAELALPPSIVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKTNAISCGSI DSDNNN Q+CGICHEPAEEPVV+SCEHTFCKACIID+TNDF K V+CP
Sbjct: 601 SKTNAISCGSIADSDNNN-QLCGICHEPAEEPVVSSCEHTFCKACIIDYTNDFSKRVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLTIDF TSLAV DQT+KNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTIDFSTSLAVRDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSLTKSGITCVQL+GSMSL+QRGDAINRFI+DPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLTQRGDAINRFIDDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGG+ALNLTVAS+VFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER
Sbjct: 781 MSLKAGGIALNLTVASNVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 840
BLAST of Lsi10G001180 vs. NCBI nr
Match:
XP_004151894.2 (DNA repair protein RAD16 isoform X1 [Cucumis sativus] >KGN63243.1 hypothetical protein Csa_021783 [Cucumis sativus])
HSP 1 Score: 1431.8 bits (3705), Expect = 0.0e+00
Identity = 731/876 (83.45%), Postives = 773/876 (88.24%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK SNVLIE G+ DGD DDI+VSSL SD GSE LSSSSED SE STKKSRA+
Sbjct: 1 MKLRPRKPASNVLIE-EGNVDGDFSDDIDVSSLVSDCGSEDLSSSSEDFSEHSTKKSRAR 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
TQ+KRIKK+GPSIEQEVGSNVGNDENL+N +PEIAD QGV DIEKPKTKYSRKKK KPTL
Sbjct: 61 TQKKRIKKDGPSIEQEVGSNVGNDENLNNPRPEIADSQGVVDIEKPKTKYSRKKKTKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWN+WEEEYERWIDENI+KDFDLA+QNEV EAVETP+ALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNIWEEEYERWIDENIEKDFDLANQNEVFAEAVETPAALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGL+RPS PSSSKDLPLIKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKDLPLIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTS+GSYKVLVYHGPKR R+LE+LSEYDFVITTYSVVEADYRK+LMP
Sbjct: 241 VVAVSQWVSEIDRFTSEGSYKVLVYHGPKRERSLEVLSEYDFVITTYSVVEADYRKYLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQQRKRPIQPQI K+E+S DKNN
Sbjct: 301 PKDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHKSG QKS LGQT+ +HENDEK G SILHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKSGGQKSTLGQTVEEHENDEKHRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNI+ RIQNFGRGPEF+RGMILLKHKILS+IVLRRTKKGRAADLALPPS
Sbjct: 481 VRHFCWWNKNISQRIQNFGRGPEFKRGMILLKHKILSTIVLRRTKKGRAADLALPPSTVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKTNAI+ G+I DSD+NNKQVCGIC+EPAEEPV TSC+HTFCKAC+ID+ DF K V+CP
Sbjct: 601 SKTNAINSGNIDDSDSNNKQVCGICYEPAEEPVDTSCKHTFCKACLIDYAGDFSKPVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLT DF TS+A DQT+KN IKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTSDFITSMAFKDQTVKNKIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSL+KSGITCVQLVGSMSL+QR DAINRFIEDPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEER
Sbjct: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEER 840
BLAST of Lsi10G001180 vs. NCBI nr
Match:
XP_008455894.1 (PREDICTED: DNA repair protein RAD16 [Cucumis melo] >KAA0034825.1 DNA repair protein RAD16 [Cucumis melo var. makuwa] >TYK28904.1 DNA repair protein RAD16 [Cucumis melo var. makuwa])
HSP 1 Score: 1428.3 bits (3696), Expect = 0.0e+00
Identity = 732/876 (83.56%), Postives = 774/876 (88.36%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK SNVLIE G+ DGD+ DDI+V SD GSE SSSSED SE STKKSRA+
Sbjct: 1 MKLRPRKPASNVLIE-EGNVDGDSSDDIDV----SDCGSEDHSSSSEDFSEHSTKKSRAR 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
TQ+KRIKK+GPSIEQEVGSNVGNDENL+NQKPEIAD QGV +IEKPKTKYSR KKPKPTL
Sbjct: 61 TQKKRIKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSR-KKPKPTL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LWN+WEEEYERWIDENI+KDFDLA+QNEVL E+VETP+ALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWNIWEEEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGL+RPS PSSSK+LPLIKATLVICP
Sbjct: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
VVAVSQWVSEIDRFTS+GSYKVLVYHGPKRVR+LEILSEYDFVITTYSVVEADYRK+LMP
Sbjct: 241 VVAVSQWVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLF+KKNLK HL YICGPDAVKTEKQ+KQQRKRPIQPQI K+E+S DKNN
Sbjct: 301 PKDRCPYCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
VHKSG+QKS LGQT+G+HENDEKP G SILHSVIWDRVILDEAHFIKDRLSNTAKAVLA
Sbjct: 361 NVHKSGAQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS TCPNCPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
VRHFCWWNKNIT RIQNFGRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPS
Sbjct: 481 VRHFCWWNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKT AI+ G+I DSD+NNKQVCG+CHEPAEEPV TSC+H FCKACIID+ DF K V+CP
Sbjct: 601 SKTKAINSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLT DF TS+A DQT+KNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE
Sbjct: 661 SCSKMLTSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSL+KSGITCVQLVGSMSL+QR DAINRFIEDPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRI RF IENSIEER
Sbjct: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEER 840
BLAST of Lsi10G001180 vs. NCBI nr
Match:
XP_023512492.1 (DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512493.1 DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1401.0 bits (3625), Expect = 0.0e+00
Identity = 714/876 (81.51%), Postives = 757/876 (86.42%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK TSN+LI+GN DGDA DDI+VSSL+SDS SE SSSSED EPSTKKSRAK
Sbjct: 1 MKLRPRKPTSNILIQGN--ADGDASDDIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAK 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
+RK IK+EGPSIEQEV VGNDEN HNQ PE+ QGV DI KPKTKYSRKKK KP L
Sbjct: 61 KKRKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPIL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LW+VW EE+ERWIDENI+KDFD+ASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
S ++GGILADEMGMGKTIQAIALVLAKR+L G AGL+RPSPYPSSSKD PLIKATLV+CP
Sbjct: 181 SPVRGGILADEMGMGKTIQAIALVLAKRELPG-AGLRRPSPYPSSSKDFPLIKATLVVCP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
V+AVSQWVSEIDRFT KGS KV V+HGPKR ++LE L E+DFVITTYSVVEA+YRKHLMP
Sbjct: 241 VIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLFYKKNLKIHL+YICGPDAVKTEKQAKQ RKRPIQPQISK E S DKNN
Sbjct: 301 PKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
H SGSQKS GQTMGQHEN+E PCGKSILHSVIWDRVILDEAHFIKDR SNTAKAVLA
Sbjct: 361 NFHNSGSQKSTFGQTMGQHENEENPCGKSILHSVIWDRVILDEAHFIKDRQSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS++CP+CPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
+RHFCWWNK IT+RIQN GRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPSI
Sbjct: 481 MRHFCWWNKYITLRIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
SKTN ISCGSI +DNNN+Q CGICHEPAEEPVVTSCEHTFCKACII NDF K V+CP
Sbjct: 601 SKTNVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLTIDF T+LA D+TIKNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM E
Sbjct: 661 SCSKMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSLTKSGITCVQL+GSMSL QR DAI RFI+DPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRF+IENSIEER
Sbjct: 781 MSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEER 840
BLAST of Lsi10G001180 vs. NCBI nr
Match:
XP_022943925.1 (DNA repair protein RAD16 [Cucurbita moschata] >XP_022943926.1 DNA repair protein RAD16 [Cucurbita moschata])
HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 712/876 (81.28%), Postives = 758/876 (86.53%), Query Frame = 0
Query: 1 MKLRPRKTTSNVLIEGNGDGDGDAFDDIEVSSLFSDSGSEVLSSSSEDSSEPSTKKSRAK 60
MKLRPRK TSN+LI+GN DGDA D+I+VSSL+SDS SE SSSSED EPSTKKSRAK
Sbjct: 1 MKLRPRKPTSNILIQGN--ADGDASDEIDVSSLYSDSESEDPSSSSEDFCEPSTKKSRAK 60
Query: 61 TQRKRIKKEGPSIEQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKKKPKPTL 120
+RK IK+EGPSIEQEV VGNDEN HNQ PE+ QGV DI KPKTKYSRKKK KP L
Sbjct: 61 KKRKGIKEEGPSIEQEVWRKVGNDENPHNQTPEVIPVQGVVDIGKPKTKYSRKKKQKPIL 120
Query: 121 LWNVWEEEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
LW+VW EE+ERWIDENI+KDFD+ASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED
Sbjct: 121 LWDVWAEEHERWIDENIEKDFDMASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQED 180
Query: 181 SSIKGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICP 240
S ++GGILADEMGMGKTIQAIALVLAKR+LSG AGL+RPSPYPSSSKD PLIKATLV+CP
Sbjct: 181 SPVRGGILADEMGMGKTIQAIALVLAKRELSG-AGLRRPSPYPSSSKDFPLIKATLVVCP 240
Query: 241 VVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMP 300
V+AVSQWVSEIDRFT KGS KV V+HGPKR ++LE L E+DFVITTYSVVEA+YRKHLMP
Sbjct: 241 VIAVSQWVSEIDRFTLKGSNKVHVFHGPKRAQSLETLFEFDFVITTYSVVEAEYRKHLMP 300
Query: 301 PKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNN 360
PKDRCPYCSKLFYKKNLKIHL+YICGPDAVKTEKQAKQ RKRPIQPQISK E S DKNN
Sbjct: 301 PKDRCPYCSKLFYKKNLKIHLKYICGPDAVKTEKQAKQIRKRPIQPQISKGEVSAKDKNN 360
Query: 361 TVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLA 420
H SGSQKS GQTMGQHENDE PCGKSILHSVIWDR+ILDEAHFIKDR SNTAKAVLA
Sbjct: 361 NFHNSGSQKSTFGQTMGQHENDENPCGKSILHSVIWDRIILDEAHFIKDRQSNTAKAVLA 420
Query: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKR 480
ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSS++CP+CPHKR
Sbjct: 421 ISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSVSCPDCPHKR 480
Query: 481 VRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI-- 540
+RHFCWWNK IT++IQN GRGPEF+RGMILLKHKILSSIVLRRTKKGRAADLALPPSI
Sbjct: 481 MRHFCWWNKYITLQIQNVGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSIVS 540
Query: 541 --------------------------------------------------AVNHPYLVVY 600
AVNHPYLVVY
Sbjct: 541 IRRDTLDIQEEDFYESLYNDSRAKFNTFVAAGTATSNYAHIFDLLIRLRQAVNHPYLVVY 600
Query: 601 SKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACP 660
S+TN ISCGSI +DNNN+Q CGICHEPAEEPVVTSCEHTFCKACII NDF K V+CP
Sbjct: 601 SRTNVISCGSIDGTDNNNEQACGICHEPAEEPVVTSCEHTFCKACIIGFANDFSKLVSCP 660
Query: 661 SCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFE 720
SCSKMLTIDF T+LA D+TIKNTIKGFK +SILNRIQLENFQTSTKIEALREEIRFM E
Sbjct: 661 SCSKMLTIDFSTNLAGRDRTIKNTIKGFKCTSILNRIQLENFQTSTKIEALREEIRFMLE 720
Query: 721 RDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFL 780
RDGSAKGIVFSQFTSFLDL+NYSLTKSGITCVQL+GSMSL QR DAI RFI+DPDCKIFL
Sbjct: 721 RDGSAKGIVFSQFTSFLDLINYSLTKSGITCVQLIGSMSLPQRDDAIKRFIDDPDCKIFL 780
Query: 781 MSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEER 825
MSLKAGG+ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRF+IENSIEER
Sbjct: 781 MSLKAGGIALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFVIENSIEER 840
BLAST of Lsi10G001180 vs. TAIR 10
Match:
AT1G05120.1 (Helicase protein with RING/U-box domain )
HSP 1 Score: 861.3 bits (2224), Expect = 6.3e-250
Identity = 452/807 (56.01%), Postives = 563/807 (69.76%), Query Frame = 0
Query: 74 EQEVGSNVGNDENLHNQKPEIADYQGVDDIEKPKTKYSRKK----KPKPTLLWNVWEEEY 133
E+E+ V ND+ L N P +A + P+ RKK K K LLW WE+E
Sbjct: 52 EEELEEVVANDD-LPNPVPVLA------IVNLPRASKKRKKPDARKEKVVLLWETWEKEQ 111
Query: 134 ERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSIKGGILA 193
WIDE++ +D DL N V+ E E PS L MPLLRYQKE+LAWA KQE S+ GGILA
Sbjct: 112 NSWIDEHMSEDVDLDQHNAVIAETAEPPSDLIMPLLRYQKEFLAWATKQE-QSVAGGILA 171
Query: 194 DEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSKDLPLIKATLVICPVVAVSQWVS 253
DEMGMGKTIQAI+LVLA+R++ ++ TLV+CP+VAVSQW++
Sbjct: 172 DEMGMGKTIQAISLVLARREV-------------DRAQFGEAAGCTLVLCPLVAVSQWLN 231
Query: 254 EIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPKDRCPYCS 313
EI RFTS GS KVLVYHG KR +N++ YDFV+TTYS VE++YR+++MP K +C YCS
Sbjct: 232 EIARFTSPGSTKVLVYHGAKRAKNIKEFMNYDFVLTTYSTVESEYRRNIMPSKVQCAYCS 291
Query: 314 KLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHKSGSQK 373
K FY K L IHLRY CGP AVKT KQ+KQ+RK+ + +E+ ++ + KS K
Sbjct: 292 KSFYPKKLVIHLRYFCGPSAVKTAKQSKQKRKKTSDSSSQQGKEADAGEDKKLKKS---K 351
Query: 374 SALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFRWAL 433
QT+ + + KS+LHSV W+R+ILDEAH+IK+R SNTA+AV A+ +++RWAL
Sbjct: 352 KKTKQTVEKDQLGSDDKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWAL 411
Query: 434 SGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDH-SSLTCPNCPHKRVRHFCWWN 493
SGTP+QNRVGELYSL+RFLQI PYS+YFCKDCDCR LD+ + +CP+CPH VRHFCWWN
Sbjct: 412 SGTPLQNRVGELYSLIRFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWN 471
Query: 494 KNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAADLALPPSI---------- 553
K + I +G +R MILLKHK+L I+LRRTK GRAADLALPP I
Sbjct: 472 KYVAKPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDV 531
Query: 554 ------------------------------------------AVNHPYLVVYSKTNAISC 613
AV+HPYLVVYS ++ +
Sbjct: 532 KEFDYYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSNSSGANA 591
Query: 614 GSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSKMLTI 673
+ +N ++Q CG+CH+PAE+ VVTSC H FCKAC+I + L V CP+CSK+LT+
Sbjct: 592 NLV--DENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSAS-LGKVTCPTCSKLLTV 651
Query: 674 DFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFERDGSAKGI 733
D+ T + K T+KGF++SSILNRI+L++FQTSTKIEALREEIRFM ERDGSAK I
Sbjct: 652 DWTTKADTEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVERDGSAKAI 711
Query: 734 VFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFLMSLKAGGV 793
VFSQFTSFLDL+NY+L K G++CVQLVGSM+++ R AIN+F EDPDC++FLMSLKAGGV
Sbjct: 712 VFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGV 771
Query: 794 ALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFIIENSIEERILKLQERK 824
ALNLTVASHVF+MDPWWNPAVERQAQDRIHRIGQYKPIR+ RFIIEN++EERIL+LQ++K
Sbjct: 772 ALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKK 831
BLAST of Lsi10G001180 vs. TAIR 10
Match:
AT1G02670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 462.6 bits (1189), Expect = 6.6e-130
Identity = 319/823 (38.76%), Postives = 435/823 (52.86%), Query Frame = 0
Query: 32 SLFSDSGSEVLSSSSEDSSEPSTKKSRAKTQRKRIKKEG-PSIEQEVGSNVGNDENLHNQ 91
+L++ + L + E S + +Q + +K+E P + VG V + N +
Sbjct: 25 TLWTGTAQGDLGVAMEPHSHHKNAILPSSSQDENLKEEEVPDDDDSVGGEVQGEVNAN-- 84
Query: 92 KPEIADYQGVDDIEKPKTKYSRKKKPKPTLLWNVWEEEYERWIDENIDKDFDLASQNEVL 151
D I P + K+K W + +E+ + D++ D+ QN V+
Sbjct: 85 ----------DYIPNPAAPANTKRK------WQIMKEKVQMTEDDDFDE------QNAVI 144
Query: 152 TEAVETPSALTMPLLRYQKEWLAWALKQEDSSIKGGILADEMGMGKTIQAIALVLAKRQL 211
EA E P L +PLL+YQKE+LAWA QE S+++GGILADEMGMGKTIQAI+LVLA+R++
Sbjct: 145 AEAAEQPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREV 204
Query: 212 SGTAGLKRPSPYPSSSKDLPLIKATLVICPVVAVSQWVSEIDRFTSKGSYKVLVYHGPKR 271
+K + TLV+ P VA+SQW+ EI R TS GS +VL YHGPKR
Sbjct: 205 -------------DRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKR 264
Query: 272 VRNLEILSEYDFVITTYSVVEADYRKHLMPPKDRCPYCSKLFYKKNLKIHLRYICGPDAV 331
+N++ L YDFV+TT +VE +YR
Sbjct: 265 DKNVQKLMNYDFVLTTSPIVENEYR----------------------------------- 324
Query: 332 KTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHKSGSQKSALGQTMGQHENDEKPCGKSI 391
K+E V+ +TM S
Sbjct: 325 --------------------KDEGVD-----------------ETM------------SP 384
Query: 392 LHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQI 451
LHS+ W+R+I+DEAH IK+R S TAKAV A+ +++RWALSGTP+QN V ELYSL
Sbjct: 385 LHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSL------ 444
Query: 452 VPYSF--YFCKDCDCRTLDHSSLTCPNCPHKRVRHFCWWN---KNITVRIQNF------- 511
V YSF +F H+ +T + V+ N +I VRI+N
Sbjct: 445 VSYSFLNFFYSTYASFAFRHTHITFAR--NVTVKFLIGGNILPLSIPVRIENVPAVLIMQ 504
Query: 512 ---GRGPEFQRGMILLKHKILSSI--VLRRTKKG------------RAADLALPPSIAVN 571
G + + + +++ S+ V + T G L + AV+
Sbjct: 505 INTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAVD 564
Query: 572 HPYLVVYSKTNAISCGSIGDSDNNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDF 631
HPYLV YS + + + N N++ CG H+P+++ VTS EH
Sbjct: 565 HPYLVSYSSPSGANANLL--DANKNEKECGFGHDPSKDYFVTSSEH-------------- 624
Query: 632 LKSVACPSCSKMLTIDFRTSLAVGDQTIKNTIKGFKSSSILNRIQLENFQTSTKIEALRE 691
Q K +KGF++SSILNRI L++F+TSTKIEALRE
Sbjct: 625 -------------------------QASKTKLKGFRASSILNRINLDDFKTSTKIEALRE 677
Query: 692 EIRFMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGSMSLSQRGDAINRFIED 751
EIRFM ERD SAK IVFSQFTSFLDL++Y+L KSG++CVQLVGSMS + + A+ F E+
Sbjct: 685 EIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEE 677
Query: 752 PDCKIFLMSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRITRFII 811
PDC++ LMSL+AGGVALNLT ASHVF+MDPWWNPAVERQAQDRIHRIGQ KP+R+ RFI+
Sbjct: 745 PDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIM 677
Query: 812 ENSIEERILKLQERKELVFEGTVGGSNEA-LGKLSLDDMRFLF 824
E ++EE+IL LQ++KE +FE T+G S EA + KL DD++ LF
Sbjct: 805 EKTVEEKILTLQKKKEDLFESTLGDSEEAVVQKLGEDDIKSLF 677
BLAST of Lsi10G001180 vs. TAIR 10
Match:
AT3G20010.1 (SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related )
HSP 1 Score: 275.0 bits (702), Expect = 1.9e-73
Identity = 234/857 (27.30%), Postives = 365/857 (42.59%), Query Frame = 0
Query: 134 DENIDKDFDLASQ------NEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSIK--G 193
D N D D L Q N+ +TE+ P L++PL+R+QK LAW ++E SS G
Sbjct: 245 DRNPDNDERLVYQAALQVLNQPMTESDLPPGTLSVPLMRHQKIALAWMFQKETSSFNCPG 304
Query: 194 GILADEMGMGKTIQAIALVLAKR---QLSGTAGLK------------------------- 253
GILAD+ G+GKT+ IAL+L ++ QL + K
Sbjct: 305 GILADDQGLGKTVSTIALILKQKIVSQLKSESSCKQETEALVLDADDESDNAKHESGSHV 364
Query: 254 RPSPYPSSSKDLPLIKA----------------------------------TLVICPVVA 313
+P SS+ + ++ A TL++CP
Sbjct: 365 KPELKVSSNSETSVLSACGNDENDSSDMEKAEDEEANSSTRAFQWKRPAAGTLIVCPASV 424
Query: 314 VSQWVSEIDRFTSKGS-YKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPK 373
V QW E+D S+ S VLVYHG R ++ L+EYD V+TTY++V + + +
Sbjct: 425 VRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNEAPNKFLVDE 484
Query: 374 DRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTV 433
D E K + + S N K V
Sbjct: 485 D-----------------------------ENDEKNTDRYGLASGFSN-----NKKRKVV 544
Query: 434 HKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAIS 493
+ + G+ + E CG L V W R++LDEA IK+ + A++ +
Sbjct: 545 VGASKKSKRRGRKSTNDTSSEPDCGP--LGKVGWFRIVLDEAQTIKNYRTQMARSCCTLR 604
Query: 494 SSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLTCPNCPHKRVR 553
+ RW LSGTPIQN + +LYS RFL+ PY+ Y +S++ P R
Sbjct: 605 AKRRWCLSGTPIQNTIDDLYSYFRFLRYDPYAVY--------KSFYSTIKVPIS-----R 664
Query: 554 HFCWWNKNITVRIQNF----GRGPEFQ-RGMILLKHKILS------SIVLRRTKKGRAAD 613
+ C K + ++ +G + +I L K+++ S+ R K AD
Sbjct: 665 NSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEAD 724
Query: 614 -----------------------LALPPSIAVNHPYLVVYSKTNAISCGSIGDSD----- 673
L L A +HP LV + N+ G + ++
Sbjct: 725 SRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLV--KRYNSDPVGKVSEAAVRRLP 784
Query: 674 -----------NNNKQVCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSK 733
++ +C C+EP E+PVVT C H FC C++++ + P C +
Sbjct: 785 REARSRLINRLESSSAICYECNEPPEKPVVTLCGHIFCYECVLEYITGDENTCPVPRCKQ 844
Query: 734 MLTIDFRTSLAVGDQTIKNTIKGFK--SSSILNRIQLENFQ----TSTKIEALREEIRFM 793
L D + + +++N SSS N + FQ S+KI+A+ + ++ +
Sbjct: 845 QLARD----VVFSESSLRNCTSDDSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSL 904
Query: 794 FERD-------------------------------------GSAKGIVFSQFTSFLDLMN 825
+ D G+ K I+FSQ+T LDL+
Sbjct: 905 SQPDSPNSAQHGQMPSSSRPYDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVE 964
BLAST of Lsi10G001180 vs. TAIR 10
Match:
AT1G50410.1 (SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related )
HSP 1 Score: 271.2 bits (692), Expect = 2.8e-72
Identity = 224/841 (26.63%), Postives = 353/841 (41.97%), Query Frame = 0
Query: 127 EEYERWIDENIDKDFDLASQNEVLTEAVETPSALTMPLLRYQKEWLAWALKQEDSSI--K 186
EE DE + L N+ +E L++PL+++QK LAW ++E +S+
Sbjct: 189 EERNSENDERLIYQAALQELNQPKSEVDLPAGLLSVPLMKHQKIALAWMFQKETNSLHCM 248
Query: 187 GGILADEMGMGKTIQAIALVLAKRQ----------------------------------- 246
GGILAD+ G+GKT+ IAL+L +
Sbjct: 249 GGILADDQGLGKTVSTIALILKQMHEAKLKSKNSGNQEAEALDLDADDESENAFEKPESK 308
Query: 247 ------LSGTAGLKRPSPYPSSSKDLPLIK-----ATLVICPVVAVSQWVSEID-RFTSK 306
++G +G+K+ +S+ + TL++CP V QW E+D + T +
Sbjct: 309 ASNGSGVNGDSGIKKAKGEEASTSTRKFNRKRPAAGTLIVCPASVVRQWARELDEKVTDE 368
Query: 307 GSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEADYRKHLMPPKDRCPYCSKLFYKKNL 366
VL+YHG R ++ L++YD V+TTY++V + K + D
Sbjct: 369 AKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEVPKQPLVDDD-------------- 428
Query: 367 KIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKEESVNDKNNTVHKSGSQKSALGQTMG 426
E K K + S+N K V G+ K + +
Sbjct: 429 ---------------ENDEKNSEKYGLASGF-----SINKKRKNV--VGTTKKSKKKKGN 488
Query: 427 QHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFRWALSGTPIQNR 486
+ D L V W RV+LDEA IK+ + A+A + + RW LSGTPIQN
Sbjct: 489 NNAGDSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNT 548
Query: 487 VGELYSLVRFLQIVPYSFY--FCKDCDCRTLDHSSL------------------------ 546
+ +LYS RFL+ PY+ Y FC + +SL
Sbjct: 549 IDDLYSYFRFLKYDPYAVYKSFCHQIK-GPISRNSLQGYKKLQAVLRAIMLRRTKGTLLD 608
Query: 547 --TCPNCPHKRVR----HFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTK 606
N P K + F ++ V++++ R ++ ++I+L +
Sbjct: 609 GQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLR 668
Query: 607 KGRAADLALPPSIAVNHPYLVVYSKTNAISCGSIGD---------------SDNNNKQVC 666
+A D HP LV + N+ S G + + S + +C
Sbjct: 669 LRQACD----------HPQLV--KRYNSDSVGKVSEEAVKKLPKEDLVSLLSRLESSPIC 728
Query: 667 GICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSKMLTID-------FRTSLA 726
+CH+P E+PVVT C H FC C+ D+ + P C + L D R+ +A
Sbjct: 729 CVCHDPPEDPVVTLCGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSKSTLRSCVA 788
Query: 727 -----------VGDQTI--KNTIKGFKSSSILNRIQ-LENFQTSTKIE------------ 786
D+++ K ++L+ +Q L N TS +
Sbjct: 789 DDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPN 848
Query: 787 ------------ALREEIRFMFERDGSAKGIVFSQFTSFLDLMNYSLTKSGITCVQLVGS 825
+ ++ G K I+FSQ+T LDL+ SL ++ I +L G+
Sbjct: 849 DDDDDDDDDVTIVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDGT 908
BLAST of Lsi10G001180 vs. TAIR 10
Match:
AT5G43530.1 (Helicase protein with RING/U-box domain )
HSP 1 Score: 252.3 bits (643), Expect = 1.3e-66
Identity = 199/735 (27.07%), Postives = 308/735 (41.90%), Query Frame = 0
Query: 184 KGGILADEMGMGKTIQAIALVLAKRQLSGTAGLKRPSPYPSSSK--------DLPLIKA- 243
+GGILAD MG+GKT+ IAL+LA+ ++ K L +KA
Sbjct: 681 RGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAK 740
Query: 244 --TLVICPVVAVSQWVSEIDRFTSKGSYKVLVYHGPKRVRNLEILSEYDFVITTYSVVEA 303
TL+ICP+ +SQW E++ + + VLVY+G R + + ++ +D V+TTY V+ +
Sbjct: 741 GGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTS 800
Query: 304 DYRKHLMPPKDRCPYCSKLFYKKNLKIHLRYICGPDAVKTEKQAKQQRKRPIQPQISKKE 363
Y++ +
Sbjct: 801 AYKQDM------------------------------------------------------ 860
Query: 364 ESVNDKNNTVHKSGSQKSALGQTMGQHENDEKPCGKSILHSVIWDRVILDEAHFIKDRLS 423
SI H + W R++LDEAH IK +
Sbjct: 861 ----------------------------------ANSIFHRIDWYRIVLDEAHTIKSWKT 920
Query: 424 NTAKAVLAISSSFRWALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSLT 483
AKA +SS RW L+GTP+QN++ +LYSL+ FL + P+
Sbjct: 921 QAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWC------------------ 980
Query: 484 CPNCPHKRVRHFCWWNKNITVRIQNFGRGPEFQRGMILLKHKILSSIVLRRTKKGRAAD- 543
++ WW+K I +N RG+ L+K IL ++LRRTK+ R +
Sbjct: 981 ----------NWAWWSKLIQKPYENGD-----PRGLKLIK-AILRPLMLRRTKETRDKEG 1040
Query: 544 ---LALPPS--------------------------------------------------- 603
L LPP+
Sbjct: 1041 SLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRL 1100
Query: 604 -IAVNHPYLVVY-------------------SKTNAISCGS---------IGDSDNNNKQ 663
NHP+LV+ + +++S + I D + N +
Sbjct: 1101 RQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVSQNAPSRAYIEEVIQDLRDGNSK 1160
Query: 664 VCGICHEPAEEPVVTSCEHTFCKACIIDHTNDFLKSVACPSCSKMLTIDFRTSLAVGDQT 723
C IC E A++PV+T C H C+ C++ +S +C C TI RT L
Sbjct: 1161 ECPICLESADDPVLTPCAHRMCRECLLTS----WRSPSCGLCPICRTILKRTELI----- 1220
Query: 724 IKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFERDGSAKGIVFSQFTSFLDLM 783
+ SI ++N++ S+K+ L + + + + K IVFSQ+TSFLDL+
Sbjct: 1221 ------SCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLL 1276
Query: 784 NYSLTKSGITCVQLVGSMSLSQRGDAINRFIEDPDCKIFLMSLKAGGVALNLTVASHVFI 824
L + G ++ G ++ R + F E I LMSLKAGGV LNLT AS VF+
Sbjct: 1281 EIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFL 1276
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P79051 | 2.6e-115 | 33.48 | ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| P31244 | 9.9e-115 | 34.55 | DNA repair protein RAD16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c... | [more] |
| Q9LHE4 | 2.7e-72 | 27.30 | Helicase-like transcription factor CHR27 OS=Arabidopsis thaliana OX=3702 GN=CHR2... | [more] |
| Q94BR5 | 3.9e-71 | 26.63 | Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana OX=3702 GN=CHR2... | [more] |
| O60177 | 2.4e-68 | 29.61 | Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe (st... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LN53 | 0.0e+00 | 83.45 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G416820 PE=3 SV=1 | [more] |
| A0A5D3DZG8 | 0.0e+00 | 83.56 | DNA repair protein RAD16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
| A0A1S3C1J5 | 0.0e+00 | 83.56 | DNA repair protein RAD16 OS=Cucumis melo OX=3656 GN=LOC103495970 PE=3 SV=1 | [more] |
| A0A6J1FYD3 | 0.0e+00 | 81.28 | DNA repair protein RAD16 OS=Cucurbita moschata OX=3662 GN=LOC111448500 PE=3 SV=1 | [more] |
| A0A6J1J723 | 0.0e+00 | 81.39 | DNA repair protein RAD16 OS=Cucurbita maxima OX=3661 GN=LOC111484062 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038902046.1 | 0.0e+00 | 86.87 | ATP-dependent helicase rhp16 [Benincasa hispida] | [more] |
| XP_004151894.2 | 0.0e+00 | 83.45 | DNA repair protein RAD16 isoform X1 [Cucumis sativus] >KGN63243.1 hypothetical p... | [more] |
| XP_008455894.1 | 0.0e+00 | 83.56 | PREDICTED: DNA repair protein RAD16 [Cucumis melo] >KAA0034825.1 DNA repair prot... | [more] |
| XP_023512492.1 | 0.0e+00 | 81.51 | DNA repair protein RAD16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512493.1... | [more] |
| XP_022943925.1 | 0.0e+00 | 81.28 | DNA repair protein RAD16 [Cucurbita moschata] >XP_022943926.1 DNA repair protein... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G05120.1 | 6.3e-250 | 56.01 | Helicase protein with RING/U-box domain | [more] |
| AT1G02670.1 | 6.6e-130 | 38.76 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
| AT3G20010.1 | 1.9e-73 | 27.30 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finge... | [more] |
| AT1G50410.1 | 2.8e-72 | 26.63 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finge... | [more] |
| AT5G43530.1 | 1.3e-66 | 27.07 | Helicase protein with RING/U-box domain | [more] |
