Lsi10G001160 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G001160
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Endoplasmic reticulum transmembrane protein
Location	chr10: 1829414 .. 1832121 (-)
RNA-Seq Expression	Lsi10G001160
Synteny	Lsi10G001160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAACTAGTTTTCAACTAGGGAAATAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAGTAAAAAAGCAGGTAAGGTATATCATTGGATCGAGACTCGAATAAGGTTTCCACCGAACACCATCACCAGGGGCTGGAAGGAACTGTCTGTTGCAGACGGACTCGTAATCCACGATGATTCAGCTTCTCTTCACTGTAATCGCAGCCCAAATGGCTCTGATTTTGACTCTCCTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTCTTAAGCGCGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTTCTTCTTTCTAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGACTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGTAATTATCTATCCTTTCTCCATTTACGTTTTCTTTGAATCTTCGCTCTCTGGATGGGGTTCTTTTAATTTCTGGGTGAAATGTGTTTGTTATTATGCTCTGTTTATGATTTCGAGCGTTGATTGATTACGGAATTATTGGCTACGAGCATCTGTAGAATGTTCAATTTTGGTCTCTGAGCTAGTTACAACCGATGGAACTGGACTTATTTATTTCAAATTAACTCCAGAATTCGAACAAAGCGGGGGGGATTTTGTTCGATTCAATGATTGTGATGTGACATTACACCTTCTCCTAAAATTGAGCTGTTTTTTTTTTCTACAATTTGGCTTGCACGCTTCTAGATTGCTTAAAATTTCACTTATAAATGGAGTTTCCTGATTAGTAAAAAAAAAAAAAAAGGCTTATAAATGCGAATGGATCTGATGCTTTATCTATGGGGATGGGTTCCAGTTTGAGCATCATGTCATGTATTGACAGAGTGTTTGGAAATTTGCTGGAGTATAATTTTGAGGGAAAATCAATAGAGGAGCATTTTAAGACTATCATTCTGAATGCTTGATGTCAATTGATGGATCCTTGAATTTTGAAGCCTAAGGCTGTTTTGATAAGTTCTTCACCTTCCTTAAAACATATTTGAATTTTAAGCCAAACTTAAAAAACAAAATCAAGTTTCTTAGGCTCTATTTGTCAACCCTTTGGATTTTAGTTTTTGGAAATGAAGCTTAAAACTGAGTTTTCATGTTTGTTATCCACTTCCTACTTATGTTTTTAAATACAAATCCAAGTTTTGAAAACTTAAAAAGGTAGTTTCCAAAAGTTTGTTTTTGTTTCTAAAATTTAGCTAAGAGTCCAAGTGTTTCTTTAAGAAATGTAAAATGAAAATCATAATTGAAAATTTGAGAGAAAATAAGCATAAATTTCAAAAATATAAAATAAAAAACGAAAGCTCCGTTTGATAACCATTTGGTTTTGGGTTTTTGGTTCTGGAAAATTAAACTTATAAATGTCACTTCCATCTATTGGTTTCTATGTTTTGTTGTTTGTCTTTCAGGAGTGTTTTCAAAATCAAAGCCAAAATAAAAAATAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTGGAAATTGGCCAAGTATTGAAATATTTGGATAGGAAATATGGAAGCATGAGTAATAAATTGTAGAAAACAAGCACATTTTTCAAAAACTAAAAACCGAATGGCTATCAAACTTGGTCGAAATTGTTACCAAATGGAGCCTTAAAAGTTGTCTTTGTTTTGGAAGATGTTTTAAAAAGATAGTTAATAGAGCACGAAAACTATAAGTGAAGGTAGAGTTTATAAGCTTCGTTTTGAAAATTAGAAAATTAAAAACAAAATGGTTATCAAATGGGGGTTGAGTTTTGTGTTCTCGTCTGATTAGCTTTGTTTGATAATCTAGATCTTACAGTTGTTCTACGAGAGATTTTGTTGTCTTTCCATTTGCTTGCAATTTTGCAGGCCATTCTCATTTGTTAGAGTACTTCATGTTAGATTTGAATATAACATTCATGTTCTGCAGGGTTTTTGTTGTTCCTCGCACTGATGATTGATAGACTACATCATTACATCCGAGAGCTTCGACTACTCCGGAAGACCATGGAGGTTGCAAAGAAGCAAATTCGAGCATCAGAGGACGCAAGCGCGGAGAAGCTTAAAGCCCTGGGAGAAGAGGCAACTACCTTAAGGAATAAAATAACCAAACTGGAATCTGATGTTGAGGTGAAAACAAAAGAAGCAAATGATGCAGAAGCTGAAACAGATGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTACGATCGCTTGCTGGAGGACAATCAGAATCTTCGGAATCAGTTGGAATCGATCGAACATGTCTCTTCATAATCTCTGACAAAACAGGTTGTCATAAAATCGTTTTCGCATCATGTAGGAGGCTTAAGAAAATGGGTGCATTTAGGCGTCTTTGCTTAATCAGTGTGCCTCTGGTTAGTTGGGTATGTATCAATGAAATGAAATTAAGCTGGGAAATTGATGGAAATATGTTCTTTAGCAAACTCGGTAAAGTGTTAAAAGTGGAAGCTTAATGCATTTAGACTACTTTCCATGGCTGTTTATTTGTACTGTCTTTTGAATGTAATTACATTGTATATGACATGTGATCCAATGTAATTGATTTTGGTAATTGCAAGTTCACAGGCGGAAAAGGCTGTTATATT

mRNA sequence

TTTAAAACTAGTTTTCAACTAGGGAAATAATAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAGTAAAAAAGCAGGTAAGGTATATCATTGGATCGAGACTCGAATAAGGTTTCCACCGAACACCATCACCAGGGGCTGGAAGGAACTGTCTGTTGCAGACGGACTCGTAATCCACGATGATTCAGCTTCTCTTCACTGTAATCGCAGCCCAAATGGCTCTGATTTTGACTCTCCTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTCTTAAGCGCGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTTCTTCTTTCTAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGACTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGGTTTTTGTTGTTCCTCGCACTGATGATTGATAGACTACATCATTACATCCGAGAGCTTCGACTACTCCGGAAGACCATGGAGGTTGCAAAGAAGCAAATTCGAGCATCAGAGGACGCAAGCGCGGAGAAGCTTAAAGCCCTGGGAGAAGAGGCAACTACCTTAAGGAATAAAATAACCAAACTGGAATCTGATGTTGAGGTGAAAACAAAAGAAGCAAATGATGCAGAAGCTGAAACAGATGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTACGATCGCTTGCTGGAGGACAATCAGAATCTTCGGAATCAGTTGGAATCGATCGAACATGTCTCTTCATAATCTCTGACAAAACAGGTTGTCATAAAATCGTTTTCGCATCATGTAGGAGGCTTAAGAAAATGGGTGCATTTAGGCGTCTTTGCTTAATCAGTGTGCCTCTGGTTAGTTGGGTATGTATCAATGAAATGAAATTAAGCTGGGAAATTGATGGAAATATGTTCTTTAGCAAACTCGGTAAAGTGTTAAAAGTGGAAGCTTAATGCATTTAGACTACTTTCCATGGCTGTTTATTTGTACTGTCTTTTGAATGTAATTACATTGTATATGACATGTGATCCAATGTAATTGATTTTGGTAATTGCAAGTTCACAGGCGGAAAAGGCTGTTATATT

Coding sequence (CDS)

ATGATTCAGCTTCTCTTCACTGTAATCGCAGCCCAAATGGCTCTGATTTTGACTCTCCTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTCTTAAGCGCGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTTCTTCTTTCTAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGACTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGGTTTTTGTTGTTCCTCGCACTGATGATTGATAGACTACATCATTACATCCGAGAGCTTCGACTACTCCGGAAGACCATGGAGGTTGCAAAGAAGCAAATTCGAGCATCAGAGGACGCAAGCGCGGAGAAGCTTAAAGCCCTGGGAGAAGAGGCAACTACCTTAAGGAATAAAATAACCAAACTGGAATCTGATGTTGAGGTGAAAACAAAAGAAGCAAATGATGCAGAAGCTGAAACAGATGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTCGAGTACGATCGCTTGCTGGAGGACAATCAGAATCTTCGGAATCAGTTGGAATCGATCGAACATGTCTCTTCATAA

Protein sequence

MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSVYSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKTMEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQSEEYLLEYDRLLEDNQNLRNQLESIEHVSS

Homology

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BLAST of Lsi10G001160 vs. ExPASy TrEMBL
Match: A0A5A7SZN8 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00450 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.8e-95
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAQMALILTLLFRTPLRKLVI SLDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 45  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 104

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 105 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 164

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 165 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESEVEVKTKEANDAEAETDALRKQ 224

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 225 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 254

[Close]

BLAST of Lsi10G001160 vs. ExPASy TrEMBL
Match: A0A5D3BQF4 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00170 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAQMALILTLLFRTPLRKLVI SLDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 60  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 119

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 120 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 179

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATTL+NKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 180 MEVAKKQIRASEDASAEKLKALGEEATTLKNKITKLESEVEVKTKEANDAEAETDALRKQ 239

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 240 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 269

[Close]

BLAST of Lsi10G001160 vs. ExPASy TrEMBL
Match: A0A0A0LMU5 (Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_2G416790 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 200/210 (95.24%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIA QMALILTLLFRTPLRKLVI +LDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIATQMALILTLLFRTPLRKLVIFTLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KI NRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMLKIHNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATT+RNKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEATTMRNKITKLESEVEVKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHASS 210

[Close]

BLAST of Lsi10G001160 vs. ExPASy TrEMBL
Match: A0A6J1FYS2 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111449028 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 197/210 (93.81%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVILSLDR+KRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSMVKIQNRMIE GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLK+LGEEATTLR+KITKLE++VE KTKEAN AEAET+ALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of Lsi10G001160 vs. ExPASy TrEMBL
Match: A0A6J1CFZ2 (Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LOC111011325 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.1e-92
Identity = 196/210 (93.33%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVILSLDR+KRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSMVKIQNRMIE GEVNPTDQVLMS+HLLEASLMGFLLFLALMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSSHLLEASLMGFLLFLALMIDRLHHYIRELRMLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           ME+AKKQIRASEDASAEKLK LGEE TTLRN+ITKLES+VE KTKEANDAEA T+ALRKQ
Sbjct: 121 MEIAKKQIRASEDASAEKLKGLGEEVTTLRNRITKLESEVEAKTKEANDAEAGTEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHGSS 210

[Close]

BLAST of Lsi10G001160 vs. NCBI nr
Match: XP_038900406.1 (B-cell receptor-associated protein 31 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 2.8e-95
Identity = 203/210 (96.67%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSMVKIQNRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMVKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEA TLRNKITKLES+VE+KTKEANDAEAETDALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEAITLRNKITKLESEVEIKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQNLRNQLE+IEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLETIEHGSS 210

[Close]

BLAST of Lsi10G001160 vs. NCBI nr
Match: KAA0034811.1 (B-cell receptor-associated protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.7e-95
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAQMALILTLLFRTPLRKLVI SLDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 45  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 104

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 105 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 164

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 165 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESEVEVKTKEANDAEAETDALRKQ 224

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 225 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 254

[Close]

BLAST of Lsi10G001160 vs. NCBI nr
Match: TYK00339.1 (B-cell receptor-associated protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 8.1e-95
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAAQMALILTLLFRTPLRKLVI SLDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 60  MIQLLFTVIAAQMALILTLLFRTPLRKLVIFSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 119

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 120 YSMLKIQNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 179

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATTL+NKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 180 MEVAKKQIRASEDASAEKLKALGEEATTLKNKITKLESEVEVKTKEANDAEAETDALRKQ 239

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           S EYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 240 SGEYLLEYDRLLEDNQNLRNQLESIEHASS 269

[Close]

BLAST of Lsi10G001160 vs. NCBI nr
Match: XP_004151895.1 (B-cell receptor-associated protein 31 [Cucumis sativus] >KGN63240.1 hypothetical protein Csa_022384 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 200/210 (95.24%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIA QMALILTLLFRTPLRKLVI +LDRLKRGKGPIVVQTIAGTVFVVLLSSV
Sbjct: 1   MIQLLFTVIATQMALILTLLFRTPLRKLVIFTLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KI NRM+E GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMLKIHNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLKALGEEATT+RNKITKLES+VEVKTKEANDAEAETDALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEATTMRNKITKLESEVEVKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQNLRNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHASS 210

[Close]

BLAST of Lsi10G001160 vs. NCBI nr
Match: XP_022944620.1 (B-cell receptor-associated protein 31-like [Cucurbita moschata] >KAG7010741.1 hypothetical protein SDJN02_27537 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.0 bits (894), Expect = 2.9e-92
Identity = 197/210 (93.81%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MIQLLFTVIAA+MALILTLLFRTPLRKLVILSLDR+KRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSMVKIQNRMIE GEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDALRKQ 180
           MEVAKKQIRASEDASAEKLK+LGEEATTLR+KITKLE++VE KTKEAN AEAET+ALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHVSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 210

[Close]

BLAST of Lsi10G001160 vs. TAIR 10
Match: AT5G42570.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 251.5 bits (641), Expect = 5.9e-67
Identity = 146/210 (69.52%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           MI LL+TVI A+MALIL LLF+TPLRKL+IL+ DR+KRG+GP+VV+TI  TVFVVLLSS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS+V IQ R  +   +NPTDQVL S HLLEASLMGF+LFL+LMIDRLHHYIRELRLLRKT
Sbjct: 61  YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASED---ASAEKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDAL 180
           ME AKKQ R  ED    S E++KALGEE   L+ KI  LES+ E K KE   A+ ET+AL
Sbjct: 121 METAKKQNRGFEDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIEH 208
           RKQ++ +L+EYDRLLEDNQNLRNQLESI H
Sbjct: 181 RKQADGFLMEYDRLLEDNQNLRNQLESIGH 210

[Close]

BLAST of Lsi10G001160 vs. TAIR 10
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-49
Identity = 110/209 (52.63%), Postives = 159/209 (76.08%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           M QLLF V+  ++ +I+ L F+TP+RKL+I+SLDR KRG+GP+V+QT++ TV V+L++SV
Sbjct: 1   MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           Y+M+ IQ R IE G VNPTD+V+M+ HLLE++LMG  LFL LMIDRLHHY+RELR+ RK 
Sbjct: 61  YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKN 120

Query: 121 MEVAKKQIRASEDASA---EKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDAL 180
           MEV KK+    E   A   +++K L EE T+LR +  +L+S++E ++KE    +    AL
Sbjct: 121 MEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIE 207
           +KQSE +L+E++RLLE+NQ LR+QL +++
Sbjct: 181 QKQSEGFLIEFNRLLEENQVLRDQLHTVD 209

[Close]

BLAST of Lsi10G001160 vs. TAIR 10
Match: AT1G11905.2 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 174.5 bits (441), Expect = 9.1e-44
Identity = 104/209 (49.76%), Postives = 156/209 (74.64%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRTPLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60
           M QLLF V+  ++ +I+ L F+TP+RKL+I+SLDR KRG+GP+V+QT++ TV V+L++SV
Sbjct: 1   MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61  YSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           Y+M+ IQ R IE G VNPTD+V+M+ HLLE++LM  +L L L++  LHHY+RELR+ RK 
Sbjct: 61  YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMVRVLELCLLL-WLHHYMRELRIRRKN 120

Query: 121 MEVAKKQIRASEDASA---EKLKALGEEATTLRNKITKLESDVEVKTKEANDAEAETDAL 180
           MEV KK+    E   A   +++K L EE T+LR +  +L+S++E ++KE    +    AL
Sbjct: 121 MEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNLRNQLESIE 207
           +KQSE +L+E++RLLE+NQ LR+QL +++
Sbjct: 181 QKQSEGFLIEFNRLLEENQVLRDQLHTVD 208

[Close]

BLAST of Lsi10G001160 vs. TAIR 10
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37
Identity = 96/213 (45.07%), Postives = 146/213 (68.54%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRT-PLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSS 60
           MIQLLF V+  + A+   LL +  PLR+LVI SLD++K GKGP  V+TIAGT+ V+L S+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query: 61  VYSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 120
           + S+VKIQN+  + G ++P DQVL   HLLEASL+G +LFL  +IDR+HHY+R+L  LR 
Sbjct: 61  LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRS 120

Query: 121 TMEVAKK----------QIRASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEAND 180
            +  +K+          +++  E+ +++++K L  + +++  ++ K E++ + K K+   
Sbjct: 121 NVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLET 180

Query: 181 AEAETDALRKQSEEYLLEYDRLLEDNQNLRNQL 203
           AE    AL+KQS E LLEYDRLLEDNQ+L++Q+
Sbjct: 181 AETHVTALQKQSAELLLEYDRLLEDNQHLQSQI 213

[Close]

BLAST of Lsi10G001160 vs. TAIR 10
Match: AT3G07190.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-36
Identity = 97/213 (45.54%), Postives = 143/213 (67.14%), Query Frame = 0


Query: 1   MIQLLFTVIAAQMALILTLLFRT-PLRKLVILSLDRLKRGKGPIVVQTIAGTVFVVLLSS 60
           MIQLLF V+  + A+   LL +  PLR+LV+ SLD+LK GK P  ++TIAGT+ V+LLS+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query: 61  VYSMVKIQNRMIETGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 120
           + +++KIQN+  + G ++P DQVL   HLLEASLMG +LF   +IDR HHY+ +L  LR 
Sbjct: 61  LMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRS 120

Query: 121 TM--------EVAKKQI--RASEDASAEKLKALGEEATTLRNKITKLESDVEVKTKEAND 180
            +        E+ K++I  +  E+ +++++K L E+ + +   + KLE + + K  +   
Sbjct: 121 NVGSSKGELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLET 180

Query: 181 AEAETDALRKQSEEYLLEYDRLLEDNQNLRNQL 203
           AEA   AL+KQS E LLEYDRLLEDNQNL++Q+
Sbjct: 181 AEAHVTALQKQSSELLLEYDRLLEDNQNLQSQI 213

The following BLAST results are available for this feature:

BLAST of Lsi10G001160 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZN8	1.8e-95	96.67	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BQF4	3.9e-95	96.19	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LMU5	1.1e-94	95.24	Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A6J1FYS2	1.4e-92	93.81	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1CFZ2	3.1e-92	93.33	Endoplasmic reticulum transmembrane protein OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Lsi10G001160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900406.1	2.8e-95	96.67	B-cell receptor-associated protein 31 [Benincasa hispida]	[more]
KAA0034811.1	3.7e-95	96.67	B-cell receptor-associated protein 31 [Cucumis melo var. makuwa]	[more]
TYK00339.1	8.1e-95	96.19	B-cell receptor-associated protein 31 [Cucumis melo var. makuwa]	[more]
XP_004151895.1	2.4e-94	95.24	B-cell receptor-associated protein 31 [Cucumis sativus] >KGN63240.1 hypothetical...	[more]
XP_022944620.1	2.9e-92	93.81	B-cell receptor-associated protein 31-like [Cucurbita moschata] >KAG7010741.1 hy...	[more]

BLAST of Lsi10G001160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42570.1	5.9e-67	69.52	B-cell receptor-associated 31-like	[more]
AT1G11905.1	1.9e-49	52.63	B-cell receptor-associated protein 31-like	[more]
AT1G11905.2	9.1e-44	49.76	B-cell receptor-associated protein 31-like	[more]
AT5G48660.1	1.7e-37	45.07	B-cell receptor-associated protein 31-like	[more]
AT3G07190.1	5.3e-36	45.54	B-cell receptor-associated protein 31-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..134
None	No IPR available	COILS	Coil	Coil	coord: 139..208
None	No IPR available	GENE3D	1.20.5.110		coord: 135..198 e-value: 6.3E-12 score: 47.2
None	No IPR available	PANTHER	PTHR12701:SF40	SUBFAMILY NOT NAMED	coord: 1..208
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G001160.1	Lsi10G001160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070973	protein localization to endoplasmic reticulum exit site
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum