Lsi10G000930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G000930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOB domain-containing protein 2
Locationchr10: 1510738 .. 1511448 (+)
RNA-Seq ExpressionLsi10G000930
SyntenyLsi10G000930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGCACAATAACGGAGTTTTGCAAGCTACACCAGCCTGTGCAGCTTGCAAACATCAAAGGAAGAAATGTCACGAGACGTGCCCGTTAGCATTGTACTTTCCCGCGGATCGTAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTTAGCAATGTAACTAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATATAAAAGGGTTTTGGAAGAGCTAAAAGTGTGTAAATTATTGACTCAAAATCAAAGCATTATTATGAATGGAGGGCAAATGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGAGGGTGGAATAATAATAATAATAATAATAATAATAATAATAATGCAAGTGGAAATTCGATTAATAATGGGAATGGGATTATGGGGATTATCAATGGAGGAGTTAATAGCAACCAATTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATTATTGAATCAAGTCCTTATAGTAATTCTTCAACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCAGCAAGATAAAGAGATTAGTTCAAGCATCGTTGTGCCACTTCAACAGCAACAACAGCAACAGCAGCATCATCCAACTTTTCACCATTGTGTTTAG

mRNA sequence

ATGCAAAAGCACAATAACGGAGTTTTGCAAGCTACACCAGCCTGTGCAGCTTGCAAACATCAAAGGAAGAAATGTCACGAGACGTGCCCGTTAGCATTGTACTTTCCCGCGGATCGTAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTTAGCAATGTAACTAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATATAAAAGGGTTTTGGAAGAGCTAAAAGTGTGTAAATTATTGACTCAAAATCAAAGCATTATTATGAATGGAGGGCAAATGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGAGGGTGGAATAATAATAATAATAATAATAATAATAATAATAATGCAAGTGGAAATTCGATTAATAATGGGAATGGGATTATGGGGATTATCAATGGAGGAGTTAATAGCAACCAATTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATTATTGAATCAAGTCCTTATAGTAATTCTTCAACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCAGCAAGATAAAGAGATTAGTTCAAGCATCGTTGTGCCACTTCAACAGCAACAACAGCAACAGCAGCATCATCCAACTTTTCACCATTGTGTTTAG

Coding sequence (CDS)

ATGCAAAAGCACAATAACGGAGTTTTGCAAGCTACACCAGCCTGTGCAGCTTGCAAACATCAAAGGAAGAAATGTCACGAGACGTGCCCGTTAGCATTGTACTTTCCCGCGGATCGTAACAGGGAATTCCAAGCCGTTCACAAGGTGTTTGGAGTTAGCAATGTAACTAAAATGGTGAAAAACGTAAGAGAAGAAGACAAGAGAAAGGCTGTGGATTCTTTGGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGGCCCTATGGTGAATATAAAAGGGTTTTGGAAGAGCTAAAAGTGTGTAAATTATTGACTCAAAATCAAAGCATTATTATGAATGGAGGGCAAATGGGATTGGGTTATAAACCAATAATGCCATGTTTGGGAGGGTGGAATAATAATAATAATAATAATAATAATAATAATAATGCAAGTGGAAATTCGATTAATAATGGGAATGGGATTATGGGGATTATCAATGGAGGAGTTAATAGCAACCAATTGTTTAATTACCTTCATGATAATTATGTAAGTGCTATTATTGAATCAAGTCCTTATAGTAATTCTTCAACTTATAATTTGCAAAGCCCTGAGAAATTGATGAGATTGCAGCAAGATAAAGAGATTAGTTCAAGCATCGTTGTGCCACTTCAACAGCAACAACAGCAACAGCAGCATCATCCAACTTTTCACCATTGTGTTTAG

Protein sequence

MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMGLGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLHDNYVSAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHCV
Homology
BLAST of Lsi10G000930 vs. ExPASy Swiss-Prot
Match: Q9LNB9 (LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-34
Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+ YFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMGLGYKPIMPCLGGW 133
           L WEA+ RQ DPVLG YGEY+R+ EELK+ K L  NQ +I                  GW
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLI------------------GW 143

Query: 134 NNNN---NNNNNNNNASGNSINNGNGIMGIINGGVNSNQ 170
           +NN    NNN+NN N    + ++G+G   + N GV  N+
Sbjct: 144 DNNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNR 164

BLAST of Lsi10G000930 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-18
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +T ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  +  A
Sbjct: 10  STTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIA 69

Query: 71  VDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKL 106
           +++L++ A  R  DPV G Y    R + +LK CK+
Sbjct: 70  MENLIYHANARALDPVGGVY----RTICDLK-CKI 99

BLAST of Lsi10G000930 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.5e-18
Identity = 44/98 (44.90%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 4   HNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LA YFP DR+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELK 102
             +K  A+ ++++++  R NDPV G YG  K++  +++
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Lsi10G000930 vs. ExPASy Swiss-Prot
Match: Q9SCS4 (LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +TP CAACKH R+KC E C  A YFP+ +   ++AVHKVFG S+V  ++ ++    +  A
Sbjct: 10  STP-CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFA 69

Query: 71  VDSLVWEAVCRQNDPVLGPYGEYKRVLEELK 102
           +D+L WEA  + NDPV G  G    +L ++K
Sbjct: 70  MDTLAWEAQVQANDPVNGCLGIIYNLLSQIK 99

BLAST of Lsi10G000930 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 15  CAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACK  R+KC   C  A YFP D+ ++F  VHKVFG SNVTK++  +    +  AV+SL
Sbjct: 10  CAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSL 69

Query: 75  VWEAVCRQNDPVLGPYGEYKRVLEELK 102
            +EA  R  DPV G  G    +  +L+
Sbjct: 70  AYEADMRLRDPVYGCVGVISLLQHQLR 96

BLAST of Lsi10G000930 vs. ExPASy TrEMBL
Match: A0A5D3CE97 (LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00180 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.6e-115
Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQATPACAACKHQRKKCHETCPLA YFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQS IMNGGQ+G
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQS-IMNGGQVG 120

Query: 121 LGYKPIMPCLGGWNNNNNNN-----NNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLH 180
           LGYKPIMPCLG WNNNNNNN     NNNNN +GN INNGNGIMGIINGGVNSN LFNYLH
Sbjct: 121 LGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLH 180

Query: 181 DNYVSAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHC 236
           DNYVSAII+SSPYSNSSTYNLQSPEKLMRLQQDKEI+SS+V PLQQQQQQQ  HPTFHHC
Sbjct: 181 DNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQ--HPTFHHC 237

BLAST of Lsi10G000930 vs. ExPASy TrEMBL
Match: A0A1S4E1K1 (LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.6e-115
Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQATPACAACKHQRKKCHETCPLA YFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQS IMNGGQ+G
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQS-IMNGGQVG 120

Query: 121 LGYKPIMPCLGGWNNNNNNN-----NNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLH 180
           LGYKPIMPCLG WNNNNNNN     NNNNN +GN INNGNGIMGIINGGVNSN LFNYLH
Sbjct: 121 LGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLH 180

Query: 181 DNYVSAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHC 236
           DNYVSAII+SSPYSNSSTYNLQSPEKLMRLQQDKEI+SS+V PLQQQQQQQ  HPTFHHC
Sbjct: 181 DNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQ--HPTFHHC 237

BLAST of Lsi10G000930 vs. ExPASy TrEMBL
Match: A0A6J1CHJ9 (LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.5e-92
Identity = 185/234 (79.06%), Postives = 198/234 (84.62%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNN  LQ   ACAACKHQRKKCH+TCPLA YFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREED+RKAVDSL+WEAVCRQNDPVLGPYGEY+RVLEELKVCKLL+QNQS    G    
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS---QGQNPF 120

Query: 121 LGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGI-INGGVNSNQLFNYLHDNYV 180
            GYKPIMPC GGWNN  N+ N          NNGNGIMGI INGGVNS+ LFNYLHDN +
Sbjct: 121 AGYKPIMPCFGGWNNGTNSTN----------NNGNGIMGININGGVNSSNLFNYLHDN-L 180

Query: 181 SAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFH 234
           SAII+SS YSNSSTYNLQSPEKL+RLQQDKEI+SS+VVPLQQQ QQQQ HP FH
Sbjct: 181 SAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQ-HPNFH 219

BLAST of Lsi10G000930 vs. ExPASy TrEMBL
Match: A0A6J1I7L7 (LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.1e-83
Identity = 176/242 (72.73%), Postives = 190/242 (78.51%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLA YFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNG--GQ 120
           NVREED+RKAV+SLVWEAVCRQNDPVLGP+GEYKRVLEELKVCK + QNQS   N   GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 MGLGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLHDNY 180
           +GL      PC G                G+  NNGNGIMG+INGGVN + LFNYLHDN 
Sbjct: 121 VGL------PCFG----------------GSISNNGNGIMGLINGGVNGSHLFNYLHDN- 180

Query: 181 VSAIIESSPYSNSSTYNLQSPEKLMRLQQD-KEISSSIVVPLQ----QQQQQQQHHPTFH 236
           +SAII+SSPY+NSSTYNLQSPEKLMRL QD KEISS+IVVP Q    QQQQQ Q H  FH
Sbjct: 181 LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFH 218

BLAST of Lsi10G000930 vs. ExPASy TrEMBL
Match: A0A6J1G604 (LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.5e-82
Identity = 175/244 (71.72%), Postives = 189/244 (77.46%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLA YFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNG--GQ 120
           NVREED+RKAV+SLVWEAVCRQNDPVLGP+GEYKRVLEELKVCK + QNQS   N   GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 MGLGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLHDNY 180
           +GL      PC G                G   NNGNGI+G+INGGVN + LFNYLHDN 
Sbjct: 121 VGL------PCFG----------------GTISNNGNGIVGLINGGVNGSHLFNYLHDN- 180

Query: 181 VSAIIESSPYSNSSTYNLQSPEKLMRLQQD-KEISSSIVVPL------QQQQQQQQHHPT 236
           +SAII+SSPY+NSSTYNLQSPEKLMRL QD KEISS+IVVP       QQQQ Q Q HP 
Sbjct: 181 LSAIIDSSPYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPPQQQQHQHQQHPN 220

BLAST of Lsi10G000930 vs. NCBI nr
Match: XP_038900978.1 (LOB domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 426.4 bits (1095), Expect = 1.6e-115
Identity = 219/235 (93.19%), Postives = 224/235 (95.32%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNGVLQ TPACAACKHQRKKCHETCPLA YFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGVLQVTPACAACKHQRKKCHETCPLAPYFPANRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQS IMNGGQ+ 
Sbjct: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQS-IMNGGQVE 120

Query: 121 LGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLHDNYVS 180
           LGYKPIMPCLGGWNNNNNN N NNNAS N INNGNGIMGIINGGVNSN LF+YLHDNYVS
Sbjct: 121 LGYKPIMPCLGGWNNNNNNKNINNNASENLINNGNGIMGIINGGVNSNHLFSYLHDNYVS 180

Query: 181 AIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHC 236
           AII+SSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQ  HPTFHHC
Sbjct: 181 AIIDSSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQ--HPTFHHC 232

BLAST of Lsi10G000930 vs. NCBI nr
Match: XP_016901865.1 (PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 217/240 (90.42%), Postives = 226/240 (94.17%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNNG+LQATPACAACKHQRKKCHETCPLA YFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQS IMNGGQ+G
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQS-IMNGGQVG 120

Query: 121 LGYKPIMPCLGGWNNNNNNN-----NNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLH 180
           LGYKPIMPCLG WNNNNNNN     NNNNN +GN INNGNGIMGIINGGVNSN LFNYLH
Sbjct: 121 LGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSNHLFNYLH 180

Query: 181 DNYVSAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHC 236
           DNYVSAII+SSPYSNSSTYNLQSPEKLMRLQQDKEI+SS+V PLQQQQQQQ  HPTFHHC
Sbjct: 181 DNYVSAIIDSSPYSNSSTYNLQSPEKLMRLQQDKEITSSMVGPLQQQQQQQ--HPTFHHC 237

BLAST of Lsi10G000930 vs. NCBI nr
Match: XP_031737200.1 (LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical protein Csa_022532 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109
Identity = 207/240 (86.25%), Postives = 218/240 (90.83%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQKHNNGVLQ TPACAACKHQRKKCHETCPLA YFPA+RNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREEDKRKAVDSL+WEAVCRQNDPVLGPYGEYKRVLEE+KVCKLLTQNQS IMNGGQ+G
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLLTQNQS-IMNGGQVG 120

Query: 121 LGYKPIMPCLGGWNNNNN-----NNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLH 180
           LGYKPI+PCLG WNNNNN     NNNNN N +GN INNGNGIMGIINGGVNS+ L NY H
Sbjct: 121 LGYKPIIPCLGAWNNNNNNNSNDNNNNNGNGNGNLINNGNGIMGIINGGVNSSHLLNYFH 180

Query: 181 DNYVSAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFHHC 236
           DNYVSAI++SSPYSNSS YNLQS EKLMRLQQDKEISS++VVPLQQQQ     HPTFHHC
Sbjct: 181 DNYVSAIVDSSPYSNSSAYNLQSHEKLMRLQQDKEISSNMVVPLQQQQ-----HPTFHHC 234

BLAST of Lsi10G000930 vs. NCBI nr
Match: XP_022140622.1 (LOB domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 7.2e-92
Identity = 185/234 (79.06%), Postives = 198/234 (84.62%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HNN  LQ   ACAACKHQRKKCH+TCPLA YFPADRNREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMG 120
           NVREED+RKAVDSL+WEAVCRQNDPVLGPYGEY+RVLEELKVCKLL+QNQS    G    
Sbjct: 61  NVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLLSQNQS---QGQNPF 120

Query: 121 LGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGI-INGGVNSNQLFNYLHDNYV 180
            GYKPIMPC GGWNN  N+ N          NNGNGIMGI INGGVNS+ LFNYLHDN +
Sbjct: 121 AGYKPIMPCFGGWNNGTNSTN----------NNGNGIMGININGGVNSSNLFNYLHDN-L 180

Query: 181 SAIIESSPYSNSSTYNLQSPEKLMRLQQDKEISSSIVVPLQQQQQQQQHHPTFH 234
           SAII+SS YSNSSTYNLQSPEKL+RLQQDKEI+SS+VVPLQQQ QQQQ HP FH
Sbjct: 181 SAIIDSSHYSNSSTYNLQSPEKLIRLQQDKEITSSVVVPLQQQVQQQQ-HPNFH 219

BLAST of Lsi10G000930 vs. NCBI nr
Match: XP_023533791.1 (LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.8e-83
Identity = 179/246 (72.76%), Postives = 192/246 (78.05%), Query Frame = 0

Query: 1   MQKHNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVK 60
           MQ+HN G LQ  PACAACKHQRKKCHETCPLA YFPAD+NREFQAVHKVFGVSNVTKMVK
Sbjct: 1   MQRHNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVK 60

Query: 61  NVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNG--GQ 120
           NVREED+RKAV+SLVWEAVCRQNDPVLGP+GEYKRVLEELKVCK + QNQS   N   GQ
Sbjct: 61  NVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCK-MGQNQSQSSNPFVGQ 120

Query: 121 MGLGYKPIMPCLGGWNNNNNNNNNNNNASGNSINNGNGIMGIINGGVNSNQLFNYLHDNY 180
           +GL      PC G                G+  NNGNGIMG+INGGVN   LFNYLHDN 
Sbjct: 121 VGL------PCFG----------------GSISNNGNGIMGLINGGVNGTHLFNYLHDN- 180

Query: 181 VSAIIESSPYSNSSTYNLQSPEKLMRLQQD-KEISSSIVVPL------QQQQQQQQH--H 236
           +SAII+SSPY+NSSTYNLQSPEKLMRLQQD KEISS+IVVP       QQQQ QQQH  H
Sbjct: 181 LSAIIDSSPYTNSSTYNLQSPEKLMRLQQDHKEISSTIVVPFQPPPPQQQQQHQQQHQQH 222

BLAST of Lsi10G000930 vs. TAIR 10
Match: AT1G06280.1 (LOB domain-containing protein 2 )

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-35
Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 0

Query: 14  ACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDS 73
           ACA+CKHQRKKC+  C L+ YFPA + +EFQAVHKVFGVSNV KMV+ VREED+ K  DS
Sbjct: 24  ACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDS 83

Query: 74  LVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLLTQNQSIIMNGGQMGLGYKPIMPCLGGW 133
           L WEA+ RQ DPVLG YGEY+R+ EELK+ K L  NQ +I                  GW
Sbjct: 84  LTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQPLI------------------GW 143

Query: 134 NNNN---NNNNNNNNASGNSINNGNGIMGIINGGVNSNQ 170
           +NN    NNN+NN N    + ++G+G   + N GV  N+
Sbjct: 144 DNNQRVFNNNSNNKNGLAMTNSSGSGGFSVNNNGVGVNR 164

BLAST of Lsi10G000930 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 )

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-19
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +T ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  +  A
Sbjct: 10  STTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIA 69

Query: 71  VDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKL 106
           +++L++ A  R  DPV G Y    R + +LK CK+
Sbjct: 70  MENLIYHANARALDPVGGVY----RTICDLK-CKI 99

BLAST of Lsi10G000930 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-19
Identity = 44/98 (44.90%), Postives = 68/98 (69.39%), Query Frame = 0

Query: 4   HNNGVLQATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVR 63
           +NN   Q   ACAACK+QR+KC   C LA YFP DR+R+F   HK+FGVSN+TK++K++ 
Sbjct: 29  NNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLT 88

Query: 64  EEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELK 102
             +K  A+ ++++++  R NDPV G YG  K++  +++
Sbjct: 89  PPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Lsi10G000930 vs. TAIR 10
Match: AT3G50510.1 (LOB domain-containing protein 28 )

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0

Query: 11  ATPACAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKA 70
           +TP CAACKH R+KC E C  A YFP+ +   ++AVHKVFG S+V  ++ ++    +  A
Sbjct: 10  STP-CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFA 69

Query: 71  VDSLVWEAVCRQNDPVLGPYGEYKRVLEELK 102
           +D+L WEA  + NDPV G  G    +L ++K
Sbjct: 70  MDTLAWEAQVQANDPVNGCLGIIYNLLSQIK 99

BLAST of Lsi10G000930 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 39/87 (44.83%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 15  CAACKHQRKKCHETCPLALYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDKRKAVDSL 74
           CAACK  R+KC   C  A YFP D+ ++F  VHKVFG SNVTK++  +    +  AV+SL
Sbjct: 10  CAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSL 69

Query: 75  VWEAVCRQNDPVLGPYGEYKRVLEELK 102
            +EA  R  DPV G  G    +  +L+
Sbjct: 70  AYEADMRLRDPVYGCVGVISLLQHQLR 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNB95.5e-3452.20LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=... [more]
Q9SSM94.2e-1849.47LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=... [more]
Q9LRW15.5e-1844.90LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S... [more]
Q9SCS42.0e-1543.96LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 S... [more]
O044791.7e-1444.83Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3CE976.6e-11590.42LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S4E1K16.6e-11590.42LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=... [more]
A0A6J1CHJ93.5e-9279.06LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 P... [more]
A0A6J1I7L75.1e-8372.73LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3... [more]
A0A6J1G6041.5e-8271.72LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE... [more]
Match NameE-valueIdentityDescription
XP_038900978.11.6e-11593.19LOB domain-containing protein 2 [Benincasa hispida][more]
XP_016901865.11.4e-11490.42PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain... [more]
XP_031737200.12.2e-10986.25LOB domain-containing protein 2 [Cucumis sativus] >KAE8652276.1 hypothetical pro... [more]
XP_022140622.17.2e-9279.06LOB domain-containing protein 2 [Momordica charantia][more]
XP_023533791.12.8e-8372.76LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G06280.13.9e-3552.20LOB domain-containing protein 2 [more]
AT1G72980.13.0e-1949.47LOB domain-containing protein 7 [more]
AT3G13850.13.9e-1944.90LOB domain-containing protein 22 [more]
AT3G50510.11.4e-1643.96LOB domain-containing protein 28 [more]
AT1G65620.11.2e-1544.83Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 14..102
e-value: 2.3E-31
score: 108.3
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 13..113
score: 22.167561
NoneNo IPR availablePANTHERPTHR31301:SF135LOB DOMAIN-CONTAINING PROTEIN 2coord: 9..226
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 9..226

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G000930.1Lsi10G000930.1mRNA