Lsi10G000900 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G000900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ras-related protein RABA1f-like
Location	chr10: 1489802 .. 1490182 (-)
RNA-Seq Expression	Lsi10G000900
Synteny	Lsi10G000900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGTGGCATTTGAGAACGTGGAGAGATGGTTGAAGGAGCTAAGAGGACACACAGATCACAACATAGTGATAATGTTGGTGGGGAATAAGGCGAATTTACGCCATCTAAGGGCAGTGTCAACAAAAAATTCACAAGCATTTGCAGAGAGAGAGATAGAACATATCTCATGGAAACTTCAACATTAGAGTCATTCAACGTCAAGAATTCTTTCACAGAAGTTCTCACACAAACCTACCGAGTTGTAAGCAGGAAAATTCTTGACATTGGAGATGACCAAACTGTTCTTCCTAAGGGACAAACCATTGATATTGGTTCTAAAGATGATGTCTCTGCAGTTAAGAAGTCTGGTTGTTGTTCTTCACAACTAACCCAATAA

mRNA sequence

ATGACACGCGAATTTACGCCATCTAAGGGCAGTGTCAACAAAAAATTCACAAGCATTTGCAGAGAGAGAGATAGAACATATCTCATGGAAACTTCAACATTAGAGTCATTCAACGTCAAGAATTCTTTCACAGAAGTTCTCACACAAACCTACCGAGTTGTAAGCAGGAAAATTCTTGACATTGGAGATGACCAAACTGTTCTTCCTAAGGGACAAACCATTGATATTGGTTCTAAAGATGATGTCTCTGCAGTTAAGAAGTCTGGTTGTTGTTCTTCACAACTAACCCAATAA

Coding sequence (CDS)

ATGACACGCGAATTTACGCCATCTAAGGGCAGTGTCAACAAAAAATTCACAAGCATTTGCAGAGAGAGAGATAGAACATATCTCATGGAAACTTCAACATTAGAGTCATTCAACGTCAAGAATTCTTTCACAGAAGTTCTCACACAAACCTACCGAGTTGTAAGCAGGAAAATTCTTGACATTGGAGATGACCAAACTGTTCTTCCTAAGGGACAAACCATTGATATTGGTTCTAAAGATGATGTCTCTGCAGTTAAGAAGTCTGGTTGTTGTTCTTCACAACTAACCCAATAA

Protein sequence

MTREFTPSKGSVNKKFTSICRERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDDVSAVKKSGCCSSQLTQ

Homology

[Close]

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+ T+ METS LES NV+N+FTEVL+Q YRVVSRK LDIGDD   LPKGQTI++GSKDD
Sbjct: 146 ERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK GCCS+
Sbjct: 206 VSAVKKVGCCSN 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot
Match: Q9LK99 (Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+ T+ METS LE+ NV+N+FTEVL+Q YRV S+K LDIGDD T LPKGQ+I++GSKDD
Sbjct: 146 ERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDHTTLPKGQSINVGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VS VKK GCCSS
Sbjct: 206 VSEVKKVGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-21
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDD-QTVLPKGQTIDIGSKD 81
           ER+ T+ METS LE+ NV+N+FTEVLTQ YRVVS+K LD GDD  T LPKGQ I++GS+D
Sbjct: 146 ERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPTTALPKGQMINVGSRD 205

Query: 82  DVSAVKKSGCCSS 94
           DVSAVKKSGCC++
Sbjct: 206 DVSAVKKSGCCAT 218

[Close]

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot
Match: Q40521 (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+ T+ METS LES NV+N+FTEVLT+ Y+VV RK L++GDD   LPKGQTI++G KDD
Sbjct: 147 ERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVG-KDD 206

Query: 82  VSAVKKSGCCSS 94
           VSAVKK GCCSS
Sbjct: 207 VSAVKKVGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot
Match: Q9S810 (Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-19
Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDD-QTVLPKGQTIDIGSKD 81
           ER+ T+ METS LE+ NV N+FTEVLTQ YRVVS+K L+ GDD  T LPKGQ I++G +D
Sbjct: 146 ERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTALPKGQMINVGGRD 205

Query: 82  DVSAVKKSGCCSS 94
           D+SAVKK GCCS+
Sbjct: 206 DISAVKKPGCCSA 218

[Close]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL
Match: A0A6J1G637 (ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL
Match: A0A6J1JAX5 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL
Match: A0A6J1I4T0 (ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL
Match: A0A0A0LN26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL
Match: A0A5D3CEB7 (Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00260 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TV PKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVPPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. NCBI nr
Match: XP_022944131.1 (ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related protein RABA1f-like [Cucurbita moschata] >XP_022971100.1 ras-related protein RABA1f-like [Cucurbita maxima] >XP_023512680.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_023533793.1 ras-related protein RABA1f-like [Cucurbita pepo subsp. pepo] >XP_038900910.1 ras-related protein RABA1f-like [Benincasa hispida] >KAG6570909.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010754.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG6604881.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026962.1 Ras-related protein RABA1f, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. NCBI nr
Match: XP_031736627.1 (ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Csa_022290 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. NCBI nr
Match: XP_022986376.1 (ras-related protein RABA1f-like [Cucurbita maxima])

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-27
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TVLPKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVLPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. NCBI nr
Match: XP_008455938.1 (PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related protein RABA1f [Cucumis melo var. makuwa] >TYK09544.1 ras-related protein RABA1f [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.7e-26
Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIGDD TV PKGQTIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDDPTVPPKGQTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. NCBI nr
Match: XP_022140351.1 (ras-related protein RABA1f-like [Momordica charantia])

HSP 1 Score: 127.5 bits (319), Expect = 6.3e-26
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+RTY METS LESFNV+NSFTEVLTQTYRVVSRKILDIG+D TVLPKG TIDIGSKDD
Sbjct: 146 ERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGEDPTVLPKGHTIDIGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK+GCCSS
Sbjct: 206 VSAVKKAGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 110.2 bits (274), Expect = 9.7e-25
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+ T+ METS LES NV+N+FTEVL+Q YRVVSRK LDIGDD   LPKGQTI++GSKDD
Sbjct: 146 ERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VSAVKK GCCS+
Sbjct: 206 VSAVKKVGCCSN 217

[Close]

BLAST of Lsi10G000900 vs. TAIR 10
Match: AT3G15060.1 (RAB GTPase homolog A1G )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+ T+ METS LE+ NV+N+FTEVL+Q YRV S+K LDIGDD T LPKGQ+I++GSKDD
Sbjct: 146 ERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDHTTLPKGQSINVGSKDD 205

Query: 82  VSAVKKSGCCSS 94
           VS VKK GCCSS
Sbjct: 206 VSEVKKVGCCSS 217

[Close]

BLAST of Lsi10G000900 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-22
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDD-QTVLPKGQTIDIGSKD 81
           ER+ T+ METS LE+ NV+N+FTEVLTQ YRVVS+K LD GDD  T LPKGQ I++GS+D
Sbjct: 146 ERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDPTTALPKGQMINVGSRD 205

Query: 82  DVSAVKKSGCCSS 94
           DVSAVKKSGCC++
Sbjct: 206 DVSAVKKSGCCAT 218

[Close]

BLAST of Lsi10G000900 vs. TAIR 10
Match: AT1G28550.1 (RAB GTPase homolog A1I )

HSP 1 Score: 97.1 bits (240), Expect = 8.5e-21
Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDD-QTVLPKGQTIDIGSKD 81
           ER+ T+ METS LE+ NV N+FTEVLTQ YRVVS+K L+ GDD  T LPKGQ I++G +D
Sbjct: 146 ERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTALPKGQMINVGGRD 205

Query: 82  DVSAVKKSGCCSS 94
           D+SAVKK GCCS+
Sbjct: 206 DISAVKKPGCCSA 218

[Close]

BLAST of Lsi10G000900 vs. TAIR 10
Match: AT4G18430.1 (RAB GTPase homolog A1E )

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 22  ERDRTYLMETSTLESFNVKNSFTEVLTQTYRVVSRKILDIGDDQTVLPKGQTIDIGSKDD 81
           ER+  + METS L++ NV+ +FT VLTQ YRV+SRK LD   D   LPKGQTIDIG+KDD
Sbjct: 146 ERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDPMSLPKGQTIDIGNKDD 205

Query: 82  VSAVKKSGCCS 93
           V+AVK SGCCS
Sbjct: 206 VTAVKSSGCCS 216

The following BLAST results are available for this feature:

BLAST of Lsi10G000900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJH0	1.4e-23	75.00	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q9LK99	2.0e-22	70.83	Ras-related protein RABA1g OS=Arabidopsis thaliana OX=3702 GN=RABA1G PE=2 SV=1	[more]
Q1PEX3	2.9e-21	69.86	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]
Q40521	1.1e-20	69.44	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]
Q9S810	1.2e-19	65.75	Ras-related protein RABA1i OS=Arabidopsis thaliana OX=3702 GN=RABA1I PE=2 SV=1	[more]

BLAST of Lsi10G000900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G637	2.8e-27	91.67	ras-related protein RABA1f-like OS=Cucurbita moschata OX=3662 GN=LOC111451118 PE...	[more]
A0A6J1JAX5	2.8e-27	91.67	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111484133 PE=4...	[more]
A0A6J1I4T0	2.8e-27	91.67	ras-related protein RABA1f-like OS=Cucurbita maxima OX=3661 GN=LOC111469871 PE=4...	[more]
A0A0A0LN26	2.8e-27	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415550 PE=4 SV=1	[more]
A0A5D3CEB7	1.8e-26	90.28	Ras-related protein RABA1f OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Lsi10G000900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944131.1	5.7e-27	91.67	ras-related protein RABA1f-like [Cucurbita moschata] >XP_022947170.1 ras-related...	[more]
XP_031736627.1	5.7e-27	91.67	ras-related protein RABA1f [Cucumis sativus] >KGN63213.1 hypothetical protein Cs...	[more]
XP_022986376.1	5.7e-27	91.67	ras-related protein RABA1f-like [Cucurbita maxima]	[more]
XP_008455938.1	3.7e-26	90.28	PREDICTED: ras-related protein RABA1f [Cucumis melo] >KAA0067439.1 ras-related p...	[more]
XP_022140351.1	6.3e-26	88.89	ras-related protein RABA1f-like [Momordica charantia]	[more]

BLAST of Lsi10G000900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60860.1	9.7e-25	75.00	RAB GTPase homolog A1F	[more]
AT3G15060.1	1.4e-23	70.83	RAB GTPase homolog A1G	[more]
AT2G33870.1	2.0e-22	69.86	RAB GTPase homolog A1H	[more]
AT1G28550.1	8.5e-21	65.75	RAB GTPase homolog A1I	[more]
AT4G18430.1	4.7e-19	64.79	RAB GTPase homolog A1E	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47979:SF16	RAB GTP-BINDING PROTEIN	coord: 21..93
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 21..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G000900.1	Lsi10G000900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding