Lsi10G000840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G000840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Glutaredoxin
Location	chr10: 1401143 .. 1401580 (-)
RNA-Seq Expression	Lsi10G000840
Synteny	Lsi10G000840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAATCGCATTATCAATCAGACCACCATGGGGCGGCGGATCAACATCGACGACGGCGGAGGGTCGGGGAAGTAGAAGCGATGTGGTTGCGTCGGTGTCGGAGAGTGCGGCCATAGTATTTGCTAGAAGAGGATGCTGCATGAGCCACGTGGTGAAGCGGCTTCTTTTGGGGCTGGGTGCCAATCCGGCGGTGTATGAGGTGGAGGAAGAACATGAATCTAGAATCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCGAACGCTAAATTACAATTGCCGGCTGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTAGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTAA

mRNA sequence

ATGCACCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAATCGCATTATCAATCAGACCACCATGGGGCGGCGGATCAACATCGACGACGGCGGAGGGTCGGGGAAGTAGAAGCGATGTGGTTGCGTCGGTGTCGGAGAGTGCGGCCATAGTATTTGCTAGAAGAGGATGCTGCATGAGCCACGTGGTGAAGCGGCTTCTTTTGGGGCTGGGTGCCAATCCGGCGGTGTATGAGGTGGAGGAAGAACATGAATCTAGAATCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCGAACGCTAAATTACAATTGCCGGCTGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTAGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTAA

Coding sequence (CDS)

ATGCACCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAATCGCATTATCAATCAGACCACCATGGGGCGGCGGATCAACATCGACGACGGCGGAGGGTCGGGGAAGTAGAAGCGATGTGGTTGCGTCGGTGTCGGAGAGTGCGGCCATAGTATTTGCTAGAAGAGGATGCTGCATGAGCCACGTGGTGAAGCGGCTTCTTTTGGGGCTGGGTGCCAATCCGGCGGTGTATGAGGTGGAGGAAGAACATGAATCTAGAATCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCGAACGCTAAATTACAATTGCCGGCTGTGTTTATTGGGGGCACCTTGTTTGGGGGTTTGGATAGAGTCATGGCTACTCATATTTCTGGGGATTTAGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTAA

Protein sequence

MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL

Homology

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BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.1e-32
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 15  TKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGL 74
           T  +  S+RP       S   +G G R  +V  V E+A IV  RRGCCM HVV+RLLLGL
Sbjct: 14  TTTVGESLRP------LSLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGL 73

Query: 75  GANPAVYEVEEEHESRILKELEAF-AKSSNAKLQLPAVFIGGTLFGGLDRVMATHISGDL 134
           G NPAV E++EE E  +L ELE    +     ++LPAV++GG LFGGLDRVMATHISG+L
Sbjct: 74  GVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGEL 133

Query: 135 VPILKQAGALWL 146
           VPILK+ GALWL
Sbjct: 134 VPILKEVGALWL 137

[Close]

BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-28
Identity = 72/148 (48.65%), Postives = 88/148 (59.46%), Query Frame = 0


Query: 1   MHQAIPY---RSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFA 60
           M+QAIPY   R+W +      A +  PP            RG   +V  +V+E   +V  
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPP---------PPPRGEEEEVRRAVAECPVVVVG 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTL 120
           R GCC+SHVVKRLL GLG NPAV+EV  E E        A   +    + LPAVF+GG L
Sbjct: 61  RSGCCLSHVVKRLLQGLGVNPAVHEVAGEAEL-------AGVVAGGGGVALPAVFVGGRL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 146
            GGLDR+MA HISG+LVPILK+AGALWL
Sbjct: 121 LGGLDRLMAVHISGELVPILKEAGALWL 132

[Close]

BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-27
Identity = 74/154 (48.05%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVA---------SVSES 60
           M+QAIPY S +     + A S+        T+T   GRG  ++VV          +V+ES
Sbjct: 1   MYQAIPYSSTRPWLRPEPAASV-VDVVKVETTTAVAGRGGEAEVVGEEEAAEVRRAVAES 60

Query: 61  AAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAV 120
             +V  RRGCC+ HVVKRLL GLG NPAV+EV  E        L+    +      LPAV
Sbjct: 61  PVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGE------AALKGVVPAGGEAAALPAV 120

Query: 121 FIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
           F+GG L GGLDR+MA HISG+LVPILK+AGALWL
Sbjct: 121 FVGGKLLGGLDRLMAVHISGELVPILKKAGALWL 147

[Close]

BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 58/130 (44.62%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 30  STSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHES 89
           + +  A       +V  +V E   +V  RRGCCM+HV +RLLLG GANPAV EV ++ + 
Sbjct: 7   AAAMAAAAADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADP 66

Query: 90  RILKELEAFAK--------------SSNAKLQLPAVFIGGTLFGGLDRVMATHISGDLVP 146
             L +    A+                 A +  PAVFIGG L GGLDR+MA H++G+LVP
Sbjct: 67  AALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVP 126

[Close]

BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 29  GSTSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHE 88
           GS   T+      S++V  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  
Sbjct: 43  GSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 102

Query: 89  SRILKELEAFAKSSNAKLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
           +        +    + K +LP ++IGG LFGGL+ +MA HI+GDLVP L+QAGALWL
Sbjct: 103 NN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL
Match: A0A6J1JFY3 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.5e-64
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS+R  WGGGS S TAEG GSRSDV+ASVSE+AAIVFARRG
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 86

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEE ES +LKELEAFAKS NA++QLPAVFIGGTLFGG
Sbjct: 87  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 146

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 147 LDRVMATHISGELVPILKQAGALWL 171

[Close]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL
Match: A0A6J1FV54 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.5e-64
Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS+R  WGGGS S TAEG GSRSDV+ASV+E+AAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEE ES +LKELEAFAKS NA++QLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWG---GGSTSTTAEGRGSRSDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ  L++RPPW    GGS S  +EG G R DVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EEHES +LKELEAFAKSSN  LQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 146
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWG---GGSTSTTAEGRGSRSDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ  L++RPPW    GGS S  +EG G R DVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EEHES +LKELEAFAKSSN  LQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 146
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.1e-63
Identity = 127/148 (85.81%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWG---GGSTSTTAEGRGSRSDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ  L++RPPW    GGS S  +EG G R DVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EEHES ++KELEAFAKSSN  LQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 146
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Lsi10G000840 vs. NCBI nr
Match: XP_038901995.1 (glutaredoxin-C9-like [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 7.6e-68
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS RPPWGGGS S TAEG GSRSDV+ASVSESAAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLSTRPPWGGGSASATAEGGGSRSDVIASVSESAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEV+EEHES ++KELEAFAKSSN KLQLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVKLQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 LDRVMATHISGDLVPILKQAGALWL 145

[Close]

BLAST of Lsi10G000840 vs. NCBI nr
Match: XP_022986394.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 5.1e-64
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS+R  WGGGS S TAEG GSRSDV+ASVSE+AAIVFARRG
Sbjct: 27  MHQAIPYRSWQSIDTKQGTLSMRSAWGGGSASATAEGGGSRSDVIASVSENAAIVFARRG 86

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEE ES +LKELEAFAKS NA++QLPAVFIGGTLFGG
Sbjct: 87  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 146

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 147 LDRVMATHISGELVPILKQAGALWL 171

[Close]

BLAST of Lsi10G000840 vs. NCBI nr
Match: XP_022944202.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 127/145 (87.59%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS+R  WGGGS S TAEG GSRSDV+ASV+E+AAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGGGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEE ES +LKELEAFAKS NA++QLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of Lsi10G000840 vs. NCBI nr
Match: KAG6570913.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010757.1 Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRG 60
           MHQAIPYRSWQSIDTKQ  LS+R  WG GS S TAEG GSRSDV+ASV+E+AAIVFARRG
Sbjct: 1   MHQAIPYRSWQSIDTKQGTLSMRSTWGSGSASATAEGGGSRSDVIASVAENAAIVFARRG 60

Query: 61  CCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTLFGG 120
           CCMSHVVKRLLLGLGANPAVYEVEEE ES +LKELEAFAKS NA++QLPAVFIGGTLFGG
Sbjct: 61  CCMSHVVKRLLLGLGANPAVYEVEEEQESGVLKELEAFAKSPNAEIQLPAVFIGGTLFGG 120

Query: 121 LDRVMATHISGDLVPILKQAGALWL 146
           LDRVMATHISG+LVPILKQAGALWL
Sbjct: 121 LDRVMATHISGELVPILKQAGALWL 145

[Close]

BLAST of Lsi10G000840 vs. NCBI nr
Match: XP_008455946.1 (PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MHQAIPYRSWQSIDTKQIALSIRPPWG---GGSTSTTAEGRGSRSDVVASVSESAAIVFA 60
           MHQAIPYRSWQSIDTKQ  L++RPPW    GGS S  +EG G R DVVASVSESAAIVFA
Sbjct: 1   MHQAIPYRSWQSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVFA 60

Query: 61  RRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQLPAVFIGGTL 120
           RRGCCMSHVVKRLLLGLGANPAVYEV+EEHES +LKELEAFAKSSN  LQLPAVFIGGTL
Sbjct: 61  RRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGTL 120

Query: 121 FGGLDRVMATHISGDLVPILKQAGALWL 146
           FGGLDRVMATHISGDLVPILKQAGALWL
Sbjct: 121 FGGLDRVMATHISGDLVPILKQAGALWL 148

[Close]

BLAST of Lsi10G000840 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 2.9e-33
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 15  TKQIALSIRPPWGGGSTSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGL 74
           T  +  S+RP       S   +G G R  +V  V E+A IV  RRGCCM HVV+RLLLGL
Sbjct: 14  TTTVGESLRP------LSLKTQGNGERVRMV--VEENAVIVIGRRGCCMCHVVRRLLLGL 73

Query: 75  GANPAVYEVEEEHESRILKELEAF-AKSSNAKLQLPAVFIGGTLFGGLDRVMATHISGDL 134
           G NPAV E++EE E  +L ELE    +     ++LPAV++GG LFGGLDRVMATHISG+L
Sbjct: 74  GVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGEL 133

Query: 135 VPILKQAGALWL 146
           VPILK+ GALWL
Sbjct: 134 VPILKEVGALWL 137

[Close]

BLAST of Lsi10G000840 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 29  GSTSTTAEGRGSRSDVVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHE 88
           GS   T+      S++V  V E+A +VFARRGCC+ HV KRLLL  G NP V E+ EE  
Sbjct: 43  GSPKPTSISNKRSSNLV--VMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 102

Query: 89  SRILKELEAFAKSSNAKLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
           +        +    + K +LP ++IGG LFGGL+ +MA HI+GDLVP L+QAGALWL
Sbjct: 103 NN-------YDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGALWL 150

[Close]

BLAST of Lsi10G000840 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 48  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQ 107
           +SE + ++F++  CCMSH +K L L LG NP +YE++E       KE+E           
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRG---KEIEHALAQLGCSPT 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Lsi10G000840 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 48  VSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSNAKLQ 107
           +SE + ++F++  CCMSH +K L L  G NP +YE++   E  I +E+E           
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELD---EINIGREIEQALAQLGCSPT 67

Query: 108 LPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
           +P VFIGG L GG ++VM+ H++  LVP+LK+AGALWL
Sbjct: 68  VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Lsi10G000840 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 44  VVASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESRILKELEAFAKSSN 103
           +   V E   +++++  CCMSH +K LL   GANPAVYE++E    R   E+E       
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGR---EIEQALLRLG 63

Query: 104 AKLQLPAVFIGGTLFGGLDRVMATHISGDLVPILKQAGALWL 146
               +P VFIGG L GG + VM+ H++G L+P+LK+AGALW+
Sbjct: 64  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:

BLAST of Lsi10G000840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	4.1e-32	56.06	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	3.6e-28	48.65	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	5.2e-27	48.05	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q0JP62	1.7e-22	44.62	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]
Q84TF4	3.0e-22	49.57	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2	[more]

BLAST of Lsi10G000840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFY3	2.5e-64	88.28	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111484142 PE=3 SV=1	[more]
A0A6J1FV54	5.5e-64	87.59	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111448720 PE=3 SV=1	[more]
A0A5D3CE70	2.7e-63	86.49	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	2.7e-63	86.49	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]
A0A5A7VGI4	6.1e-63	85.81	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]

BLAST of Lsi10G000840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901995.1	7.6e-68	91.72	glutaredoxin-C9-like [Benincasa hispida]	[more]
XP_022986394.1	5.1e-64	88.28	glutaredoxin-C9-like [Cucurbita maxima]	[more]
XP_022944202.1	1.1e-63	87.59	glutaredoxin-C9-like [Cucurbita moschata]	[more]
KAG6570913.1	5.7e-63	86.90	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010757.1 G...	[more]
XP_008455946.1	5.7e-63	86.49	PREDICTED: glutaredoxin-C9-like [Cucumis melo] >TYK09572.1 glutaredoxin-C9-like ...	[more]

BLAST of Lsi10G000840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	2.9e-33	56.06	Thioredoxin superfamily protein	[more]
AT1G03850.2	2.1e-23	49.57	Glutaredoxin family protein	[more]
AT4G15700.1	3.7e-20	44.90	Thioredoxin superfamily protein	[more]
AT4G15690.1	1.1e-19	43.88	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.4e-19	43.14	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 46..145 e-value: 1.0E-36 score: 122.8
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 37..145
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 54..117 e-value: 2.0E-7 score: 31.1
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 38..144 e-value: 2.1E-22 score: 80.9
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 37..145
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 41..144 score: 18.552059
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 47..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G000840.1	Lsi10G000840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity