Lsi10G000620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G000620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr10: 1069260 .. 1071237 (-)
RNA-Seq ExpressionLsi10G000620
SyntenyLsi10G000620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTCTATTCACAAAATCGCCGCCGGTGGTGGCAAGAGGCGGAGATGGTGTGTATGTGGCGGCTGTGCCATTAAGAGCCACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCTGCTTACTCTTTCAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCCTCCTCCCCAACTTCTCGCTCTCAGGTTCTTTTCTTTTCCAATTAGATTGCCCCTTATACTTTCTGCGCAAAGAGCGATTTCGTTTGAACTTTGAATTACCCACCTTGAAGAATAACCGTAAATGGGTTCATGAAAGGGTTTTTGCCTATTGCGGCATGTGAAATTTCTTAGCTAATTTGTGTTTGAGACTGTCGTTTTGGGTGGATTGATTGGCGTTTCTTGTTGTTAGAGATGATTTCAGGCCTGGGTTTTTGATTTTCAACCTAAAGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAAGCAGTTCCAGGTCCGGTGTAGTACTCTTTAACTTATATGCTCATGGGATAGTTTGAATTTTTCTTTAACAATGTTCAAACTGATGAATGAGTGCTTATTTCACTCCAATTGCTCTGCCTTATAGGATCCTGGAAAAATCAATCTCTATTCTCTTAGATTTAAAATGTTTGTGAGAGATGTTTGAATTAGTACATATCTGCATTTATCTATTGTGAAGTTTAAGGTTACGCGATATTTGGTGTTCCGTAACTCATGTATCTTAATAACGATTGTGAGACCTCTTCATTTTTTTTTCAATTTGGGATCTCAACATGTGCAATTGGAATTACTAGTTATTAATCTTTTATTTCGAAAGCCAAGTGAAACTATTCTAATTAACATGTTGGAATGCCTATAATCCGTTATATGGCACTTCGAATGACCAAGTACGGGGTCTCGTATCTATGCTATTTACGCTATTTATGACTTTGGCCCTATGGTTTAGAGGAGTGCACTATATAAACACTCTAATCCTACAAGCGCCTTTGATTCTGTAATTTGATATTTTCTCTTTAATAATAAACTACCCCTTCTCTCTGCTCTGTGAACGACGTAATTTTCTGTGTTGATTCTCTATTGTTTACGTTGCTATTTATCTTTGATGGTCGATTTCTTAACATAACAAATGCTTTGTTAAAAGAAAACAAAGTAAAAGAAGCTGCCAAAGGGTGGCATCATTGGTAAGACTTTTGGGATGTTAGGCTTTACAACATGGCTAAATTACTTCCTGACTTTGAGATTGTGAAAACTAATCCTTCATTGTAACTGTTCTCCAAACTGTGATGCTCATTTTACTAGTACTACACAACTGATTTATTTCAATACTACAATTTAACAGACCTGAAAGCTCAATATTTTCCTTTATCATGTTTTTGAAATTTACTTCAGCGCATTCTCAATTACCTCTTTTTATCATGAGCAATGAACTGAAAATCAATTTCTGCACTGTAACAGATTGTGTGATTTGGTGTTAGGAGTTGTTCGTGAGAGGAAGTTGTCAAGGCTGCCAAAAAACAAATGTTCATACGTGGGATATTCGAATGCCAATGCCGTAGAAGTAGCACGTAAGTTCAACGGAAGTTGGGATACTAATTTGAGGATTGGTCTTCATGACTGTAGAGACTATACAAATGGTAATATAGCAGCAGTTCTTTTTGTCAATCTTCTTTCTGAATCATCTTACAATTGAAATTTTGAATATTGTTTCTTGCTTTTCTGTCTGGTCTGGAAGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGCGCCTAAGGCAGAATTCTTTAAGCATTTAATAATGTACAATTCATGAATCTATCATTTTGATGTCACTTGGTTTACTCTGGATTGTTGCTTTTCTGGAACAATATGAATGTATCACTGGTCCGAAATTGTAAATTCTTCTGATATTAAAAGTAGCAACAGAATTTTCTCTCCACTGGCCTAAA

mRNA sequence

ATGGCCACTCTATTCACAAAATCGCCGCCGGTGGTGGCAAGAGGCGGAGATGGTGTGTATGTGGCGGCTGTGCCATTAAGAGCCACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCTGCTTACTCTTTCAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCCTCCTCCCCAACTTCTCGCTCTCAGGCCTGGGTTTTTGATTTTCAACCTAAAGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAAGCAGTTCCAGGTCCGGTGTAATTGTGTGATTTGGTGTTAGGAGTTGTTCGTGAGAGGAAGTTGTCAAGGCTGCCAAAAAACAAATGTTCATACGTGGGATATTCGAATGCCAATGCCGTAGAAGTAGCACGTAAGTTCAACGGAAGTTGGGATACTAATTTGAGGATTGGTCTTCATGACTGTAGAGACTATACAAATGGCTTGGTTGAGGCTCTGCTTGGTGAAGAAAATGTGTTGGAGCGCCTAAGGCAGAATTCTTTAAGCATTTAATAATGTACAATTCATGAATCTATCATTTTGATGTCACTTGGTTTACTCTGGATTGTTGCTTTTCTGGAACAATATGAATGTATCACTGGTCCGAAATTGTAAATTCTTCTGATATTAAAAGTAGCAACAGAATTTTCTCTCCACTGGCCTAAA

Coding sequence (CDS)

ATGGCCACTCTATTCACAAAATCGCCGCCGGTGGTGGCAAGAGGCGGAGATGGTGTGTATGTGGCGGCTGTGCCATTAAGAGCCACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCTGCTTACTCTTTCAACATCTGGGATTTGCAGCATTTCATGGTTATCATCGCACCCTCCTCCCCAACTTCTCGCTCTCAGGCCTGGGTTTTTGATTTTCAACCTAAAGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAAGCAGTTCCAGGTCCGGTGTAA

Protein sequence

MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSPTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV
Homology
[Close]
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match: A0A6J1G8N3 (uncharacterized protein LOC111451737 OS=Cucurbita moschata OX=3662 GN=LOC111451737 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-38
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP
Sbjct: 1  MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          TSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Sbjct: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVV 93

[Close]
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match: A0A5D3CK24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00410 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 86/96 (89.58%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
          MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1  MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61 PTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          PTS SQA VFDFQPKDPEDIQVALAALSGK VPG V
Sbjct: 61 PTSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVV 96

[Close]
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match: A0A1S3C2U2 (uncharacterized protein LOC103496028 OS=Cucumis melo OX=3656 GN=LOC103496028 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 86/96 (89.58%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
          MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1  MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61 PTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          PTS SQA VFDFQPKDPEDIQVALAALSGK VPG V
Sbjct: 61 PTSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVV 96

[Close]
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match: A0A5A7UDH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001060 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.8e-37
Identity = 85/96 (88.54%), Postives = 86/96 (89.58%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIA-PSS 60
          MATLFTKS P V R GDGVYVAAVPLRATKGPAQLLASAAYSFNIWD QHFMVIIA PSS
Sbjct: 1  MATLFTKSAPAVTRSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDFQHFMVIIAPPSS 60

Query: 61 PTSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          P+S SQA VFDFQPKDPEDIQVALAALSGK VPG V
Sbjct: 61 PSSHSQALVFDFQPKDPEDIQVALAALSGKPVPGVV 96

[Close]
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match: A0A6J1I2F2 (uncharacterized protein LOC111469884 OS=Cucurbita maxima OX=3661 GN=LOC111469884 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.4e-37
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          M TLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAP SP
Sbjct: 1  MTTLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPPSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          TSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Sbjct: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVV 93

[Close]
BLAST of Lsi10G000620 vs. NCBI nr
Match: XP_038901412.1 (uncharacterized protein LOC120088292 isoform X2 [Benincasa hispida])

HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS 
Sbjct: 1  MASLFTKWPPAVARSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSS 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          +SRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Sbjct: 61 SSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVV 95

[Close]
BLAST of Lsi10G000620 vs. NCBI nr
Match: XP_038901415.1 (uncharacterized protein LOC120088292 isoform X4 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS 
Sbjct: 1  MASLFTKWPPAVARSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSS 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVP 93
          +SRSQA VFDFQPKDPEDIQVALAALSGKAVP
Sbjct: 61 SSRSQALVFDFQPKDPEDIQVALAALSGKAVP 92

[Close]
BLAST of Lsi10G000620 vs. NCBI nr
Match: XP_038901414.1 (uncharacterized protein LOC120088292 isoform X3 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFTK PP VAR GDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSS 
Sbjct: 1  MASLFTKWPPAVARSGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSS 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVP 93
          +SRSQA VFDFQPKDPEDIQVALAALSGKAVP
Sbjct: 61 SSRSQALVFDFQPKDPEDIQVALAALSGKAVP 92

[Close]
BLAST of Lsi10G000620 vs. NCBI nr
Match: KAG6604899.1 (hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026982.1 hypothetical protein SDJN02_10990 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP
Sbjct: 1  MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          TSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Sbjct: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVV 93

[Close]
BLAST of Lsi10G000620 vs. NCBI nr
Match: XP_022948039.1 (uncharacterized protein LOC111451737 [Cucurbita moschata])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MATLF+K    V RGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP
Sbjct: 1  MATLFSKL--AVVRGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
          TSRSQA VFDFQPKDPEDIQVALAALSGKAVPG V
Sbjct: 61 TSRSQALVFDFQPKDPEDIQVALAALSGKAVPGVV 93

[Close]
BLAST of Lsi10G000620 vs. TAIR 10
Match: AT2G04790.1 (unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 5.6e-25
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
            R +  VFDFQP++PE I+ A++ LSG  +PG V
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPGVV 94

[Close]
BLAST of Lsi10G000620 vs. TAIR 10
Match: AT2G04790.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 5.6e-25
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPGPV 96
            R +  VFDFQP++PE I+ A++ LSG  +PG V
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPGVV 94

[Close]
BLAST of Lsi10G000620 vs. TAIR 10
Match: AT2G04790.3 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 7.3e-25
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG 94
            R +  VFDFQP++PE I+ A++ LSG  +PG
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPG 92

[Close]
BLAST of Lsi10G000620 vs. TAIR 10
Match: AT2G04790.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 7.3e-25
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 1  MATLFTKSPPVVARGGDGVYVAAVPLRATKGPAQLLASAAYSFNIWDLQHFMVIIAPSSP 60
          MA+LFT SP   +  GD +YVAAVPL+A  GP QL+ S AYS NI +LQHFMV+I PSSP
Sbjct: 1  MASLFTPSPTTTSSSGDTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKPSSP 60

Query: 61 TSRSQAWVFDFQPKDPEDIQVALAALSGKAVPG 94
            R +  VFDFQP++PE I+ A++ LSG  +PG
Sbjct: 61 I-RQEVLVFDFQPRNPESIEAAISLLSGNLIPG 92

The following BLAST results are available for this feature:
BLAST of Lsi10G000620 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi10G000620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G8N35.8e-3891.58uncharacterized protein LOC111451737 OS=Cucurbita moschata OX=3662 GN=LOC1114517... [more]
A0A5D3CK241.3e-3789.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C2U21.3e-3789.58uncharacterized protein LOC103496028 OS=Cucumis melo OX=3656 GN=LOC103496028 PE=... [more]
A0A5A7UDH83.8e-3788.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1I2F26.4e-3789.47uncharacterized protein LOC111469884 OS=Cucurbita maxima OX=3661 GN=LOC111469884... [more]
BLAST of Lsi10G000620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038901412.14.9e-3991.58uncharacterized protein LOC120088292 isoform X2 [Benincasa hispida][more]
XP_038901415.14.1e-3892.39uncharacterized protein LOC120088292 isoform X4 [Benincasa hispida][more]
XP_038901414.14.1e-3892.39uncharacterized protein LOC120088292 isoform X3 [Benincasa hispida][more]
KAG6604899.11.2e-3791.58hypothetical protein SDJN03_02216, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948039.11.2e-3791.58uncharacterized protein LOC111451737 [Cucurbita moschata][more]
BLAST of Lsi10G000620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G04790.15.6e-2557.89unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bac... [more]
AT2G04790.25.6e-2557.89unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT2G04790.37.3e-2558.06unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT2G04790.47.3e-2558.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36342PTB DOMAIN ENGULFMENT ADAPTERcoord: 6..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G000620.1Lsi10G000620.1mRNA