Lsi10G000430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G000430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit B-3
Location	chr10: 696585 .. 697142 (-)
RNA-Seq Expression	Lsi10G000430
Synteny	Lsi10G000430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATGCTTTATTTATCAATCTCCAAAAGAAATTCACTTCCTATTCAGAAATTCGTACAACATGATCAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTCTCTCTGGTCAATTGAAATCCTCGTCGGCGTCAGCTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAGAAACCCGGACCGGTCTGATGACGGTTCTATTTCTGACGAGGAAAGTTTGATCGAGATCGCTCTCCCTACCGGACATTACGTCAGCCATAAGTTCGATGACGTCGACGACGAGGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAAAAACAGCAGCAGATGAAGAAGAATCTTGTGGAGATGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTAA

mRNA sequence

ATGTCTATGCTTTATTTATCAATCTCCAAAAGAAATTCACTTCCTATTCAGAAATTCGTACAACATGATCAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTCTCTCTGGTCAATTGAAATCCTCGTCGGCGTCAGCTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAGAAACCCGGACCGGTCTGATGACGGTTCTATTTCTGACGAGGAAAGTTTGATCGAGATCGCTCTCCCTACCGGACATTACGTCAGCCATAAGTTCGATGACGTCGACGACGAGGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAAAAACAGCAGCAGATGAAGAAGAATCTTGTGGAGATGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTAA

Coding sequence (CDS)

ATGTCTATGCTTTATTTATCAATCTCCAAAAGAAATTCACTTCCTATTCAGAAATTCGTACAACATGATCAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTCTCTCTGGTCAATTGAAATCCTCGTCGGCGTCAGCTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAGAAACCCGGACCGGTCTGATGACGGTTCTATTTCTGACGAGGAAAGTTTGATCGAGATCGCTCTCCCTACCGGACATTACGTCAGCCATAAGTTCGATGACGTCGACGACGAGGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAAAAACAGCAGCAGATGAAGAAGAATCTTGTGGAGATGTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTAA

Protein sequence

MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSESECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYSRFEIEA

Homology

[Close]

BLAST of Lsi10G000430 vs. ExPASy TrEMBL
Match: A0A5A7UY43 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00220 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.9e-73
Identity = 161/191 (84.29%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQ-----HDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGD 60
           MSMLY SISKR+SLPIQKFVQ      ++EEEEEEEDQKELTF S  LKSSSASAPTT D
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRD 60

Query: 61  LLSESECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYV 120
           LLSESECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYV
Sbjct: 61  LLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYV 120

Query: 121 SHKFDDVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMG 180
           S KFDDVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMG
Sbjct: 121 SRKFDDVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMG 180

Query: 181 SIKYSRFEIEA 186
           SIKYSRFEIEA
Sbjct: 181 SIKYSRFEIEA 186

[Close]

BLAST of Lsi10G000430 vs. ExPASy TrEMBL
Match: A0A5D3CJH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001550 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.7e-73
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKR+SLPIQKFVQ  ++EEEEEEDQKELTF S  LKSSSASAPTT DLLSES
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQ--EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSES 60

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 61  ECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFD 120

Query: 121 DVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYS 180
           DVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMGSIKYS
Sbjct: 121 DVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMGSIKYS 179

Query: 181 RFEIEA 186
           RFEIEA
Sbjct: 181 RFEIEA 179

[Close]

BLAST of Lsi10G000430 vs. ExPASy TrEMBL
Match: A0A1S3CMD0 (uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.7e-73
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKR+SLPIQKFVQ  ++EEEEEEDQKELTF S  LKSSSASAPTT DLLSES
Sbjct: 54  MSMLYFSISKRSSLPIQKFVQ--EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSES 113

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 114 ECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFD 173

Query: 121 DVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYS 180
           DVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMGSIKYS
Sbjct: 174 DVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMGSIKYS 232

Query: 181 RFEIEA 186
           RFEIEA
Sbjct: 234 RFEIEA 232

[Close]

BLAST of Lsi10G000430 vs. ExPASy TrEMBL
Match: A0A0A0KCP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112470 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70
Identity = 155/185 (83.78%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKRNSLPI+KFVQ    EEEEEEDQK+LTF S  LKSSSASAPT  DLLSES
Sbjct: 1   MSMLYFSISKRNSLPIRKFVQ----EEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSES 60

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R    RNP RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 61  ECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFD 120

Query: 121 DVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYSR 180
           DV DEDEDD+SFR+QKL+DFQ     +KNLVE+LAEINDINEEENLIEIDISMGSIKYSR
Sbjct: 121 DV-DEDEDDISFRYQKLTDFQ-----RKNLVEVLAEINDINEEENLIEIDISMGSIKYSR 175

Query: 181 FEIEA 186
           FEIEA
Sbjct: 181 FEIEA 175

[Close]

BLAST of Lsi10G000430 vs. ExPASy TrEMBL
Match: A0A6J1CG35 (uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011203 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60
Identity = 151/192 (78.65%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 1   MSMLYLSISKRNSL------PIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTG 60
           MSMLY +ISKRNSL      PI+KFV     EEEEEE + E++F S Q K SSASAP TG
Sbjct: 53  MSMLYFAISKRNSLPIPIPIPIEKFV-----EEEEEEAEAEVSFDSDQ-KFSSASAP-TG 112

Query: 61  DLLSESECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHY 120
           DLLSESECADDNFTTTEESEVEWP+ DR   TA NPDRS DGSISDEESLIEIALPTGHY
Sbjct: 113 DLLSESECADDNFTTTEESEVEWPFSDRT--TAHNPDRS-DGSISDEESLIEIALPTGHY 172

Query: 121 VSHKF-DDVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISM 180
           VSHKF DD +DEDEDDMSF  QKLSDFQKQ    KNLVE+LAEINDINEEENLIEIDISM
Sbjct: 173 VSHKFDDDEEDEDEDDMSFHLQKLSDFQKQ----KNLVELLAEINDINEEENLIEIDISM 230

Query: 181 GSIKYSRFEIEA 186
           GSIKYSRFEIEA
Sbjct: 233 GSIKYSRFEIEA 230

[Close]

BLAST of Lsi10G000430 vs. NCBI nr
Match: XP_038902685.1 (uncharacterized protein LOC120089322 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 5.2e-77
Identity = 164/185 (88.65%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKRNSLPIQKFVQ  Q EEEEEEDQK+LTF S  LKSSS SAPTTGDLLSES
Sbjct: 44  MSMLYFSISKRNSLPIQKFVQQVQ-EEEEEEDQKKLTFFSDHLKSSSVSAPTTGDLLSES 103

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD RSY   NPDRSDDGSISDEESLIEIALPTGHYVSHKFD
Sbjct: 104 ECADDNFTTTEESEVEWPYFDHRSYKPNNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 163

Query: 121 DVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYSR 180
           DVDDEDED MSFR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMGSIKYSR
Sbjct: 164 DVDDEDEDGMSFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMGSIKYSR 222

Query: 181 FEIEA 186
           FEIEA
Sbjct: 224 FEIEA 222

[Close]

BLAST of Lsi10G000430 vs. NCBI nr
Match: KAA0060802.1 (uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 5.9e-73
Identity = 161/191 (84.29%), Postives = 167/191 (87.43%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQ-----HDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGD 60
           MSMLY SISKR+SLPIQKFVQ      ++EEEEEEEDQKELTF S  LKSSSASAPTT D
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQEQEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAPTTRD 60

Query: 61  LLSESECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYV 120
           LLSESECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYV
Sbjct: 61  LLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYV 120

Query: 121 SHKFDDVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMG 180
           S KFDDVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMG
Sbjct: 121 SRKFDDVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMG 180

Query: 181 SIKYSRFEIEA 186
           SIKYSRFEIEA
Sbjct: 181 SIKYSRFEIEA 186

[Close]

BLAST of Lsi10G000430 vs. NCBI nr
Match: TYK11971.1 (uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 7.7e-73
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKR+SLPIQKFVQ  ++EEEEEEDQKELTF S  LKSSSASAPTT DLLSES
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQ--EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSES 60

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 61  ECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFD 120

Query: 121 DVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYS 180
           DVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMGSIKYS
Sbjct: 121 DVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMGSIKYS 179

Query: 181 RFEIEA 186
           RFEIEA
Sbjct: 181 RFEIEA 179

[Close]

BLAST of Lsi10G000430 vs. NCBI nr
Match: XP_008464163.1 (PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 7.7e-73
Identity = 160/186 (86.02%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKR+SLPIQKFVQ  ++EEEEEEDQKELTF S  LKSSSASAPTT DLLSES
Sbjct: 54  MSMLYFSISKRSSLPIQKFVQ--EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSES 113

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R Y AR+P RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 114 ECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRKFD 173

Query: 121 DVD-DEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYS 180
           DVD DEDEDD  FR+QKLSDFQ     KKNLVE+LAEINDINEEENLIEIDISMGSIKYS
Sbjct: 174 DVDEDEDEDDTPFRYQKLSDFQ-----KKNLVEVLAEINDINEEENLIEIDISMGSIKYS 232

Query: 181 RFEIEA 186
           RFEIEA
Sbjct: 234 RFEIEA 232

[Close]

BLAST of Lsi10G000430 vs. NCBI nr
Match: XP_011656887.2 (uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetical protein Csa_005290 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 4.2e-71
Identity = 156/185 (84.32%), Postives = 165/185 (89.19%), Query Frame = 0


Query: 1   MSMLYLSISKRNSLPIQKFVQHDQEEEEEEEDQKELTFLSGQLKSSSASAPTTGDLLSES 60
           MSMLY SISKRNSLPI+KFVQ ++EEEEEEEDQK+LTF S  LKSSSASAPT  DLLSES
Sbjct: 54  MSMLYFSISKRNSLPIRKFVQ-EEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLSES 113

Query: 61  ECADDNFTTTEESEVEWPYFDRRSYTARNPDRSDDGSISDEESLIEIALPTGHYVSHKFD 120
           ECADDNFTTTEESEVEWPYFD R    RNP RSDDGSISDEESLIEIALPTGHYVS KFD
Sbjct: 114 ECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRKFD 173

Query: 121 DVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEMLAEINDINEEENLIEIDISMGSIKYSR 180
           DV DEDEDD+SFR+QKL+DFQ     +KNLVE+LAEINDINEEENLIEIDISMGSIKYSR
Sbjct: 174 DV-DEDEDDISFRYQKLTDFQ-----RKNLVEVLAEINDINEEENLIEIDISMGSIKYSR 231

Query: 181 FEIEA 186
           FEIEA
Sbjct: 234 FEIEA 231

[Close]

BLAST of Lsi10G000430 vs. TAIR 10
Match: AT2G04480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits to 38 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-16
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 91  DRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDEDEDDMSFRFQKLSDFQKQQQMKKNL 150
           +  DDG+I D+ESLIE++LP+GHY+ H ++        +  +   K+ DF+        L
Sbjct: 166 EEDDDGAIPDDESLIELSLPSGHYLGHHYN-----SNKNHLYIHNKVQDFR--------L 225

Query: 151 VEMLAEINDINEEENLIEIDISMGSIKYSRFEIEA 186
            ++L EIND  EE+NLIEIDIS+GSIKYSRFEI+A
Sbjct: 226 FDLLNEINDFTEEDNLIEIDISIGSIKYSRFEIKA 247

[Close]

BLAST of Lsi10G000430 vs. TAIR 10
Match: AT5G35870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 94  DDGSISDEESLIEIALPTGHYVSHKFDDVDDEDEDDMSFRFQKLSDFQKQQQMKKNLVEM 153
           DDG+I DEESLIE++LP+GHY+ H +  +    + D    +  + DF+        L+++
Sbjct: 119 DDGTIPDEESLIELSLPSGHYIGHHYSTM--IGKQDQKIMYNNIPDFR--------LIQL 178

Query: 154 LAEINDINEEENLIEIDISMGSIKYSRFEIEA 186
            AE     E++NLIEIDIS+GSIK SRF+I+A
Sbjct: 179 SAEY----EDDNLIEIDISIGSIKCSRFQIKA 196

The following BLAST results are available for this feature:

BLAST of Lsi10G000430 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi10G000430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY43	2.9e-73	84.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CJH9	3.7e-73	86.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CMD0	3.7e-73	86.02	uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=...	[more]
A0A0A0KCP7	2.3e-70	83.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112470 PE=4 SV=1	[more]
A0A6J1CG35	2.1e-60	78.65	uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]

BLAST of Lsi10G000430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902685.1	5.2e-77	88.65	uncharacterized protein LOC120089322 [Benincasa hispida]	[more]
KAA0060802.1	5.9e-73	84.29	uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]	[more]
TYK11971.1	7.7e-73	86.02	uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]	[more]
XP_008464163.1	7.7e-73	86.02	PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]	[more]
XP_011656887.2	4.2e-71	84.32	uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetica...	[more]

BLAST of Lsi10G000430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04480.1	3.2e-16	48.42	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35870.1	1.6e-12	44.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..74
None	No IPR available	PANTHER	PTHR35708:SF3	GB\|AAD25831.1	coord: 8..185
None	No IPR available	PANTHER	PTHR35708	GB\|AAD25831.1	coord: 8..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G000430.1	Lsi10G000430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane