Lsi10G000350 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTATTGATATTTATAATAAATAGTATTTTAGTAAAGAATTAAGTTATTACTCAACAAAGAAATTTTTTTTTAAAGGATGAGATCAATTCAGAAGTAACCTTTTTCTTTATTATTAGAACAGACAGAATTCTATTGGGTTAATTTGGGGACACACGATAGATTTTTATCCTATAGTATTCTACAAAAAAGACATATCAAGATAAATAATCCCGATACGCTCCTTAGATTTATTTAAAGCCCTCAAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAATAGCGATGAGAACAGTGATGTTATTACCGACTATGATTATCTAACAGTTCGAGTACCATTGATATAGTTGAGGCTCAATCAAAATATGGTTTTTGGGGGTGGAATTTGTGGCGTCAACCTATAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGAGTATTCGGGTATCAAATTTGGTTTATTTTATGTTGCTTCCTATCTAAATCTATTAGTTTCTTCGTTATTTGTAACTGTTCTTTACTTGGGTGGTTGGGATATCTCTATTCCATACATATTCGGTTATGAATTTTTTGAAATAAATAAAGCGTATGAAGTCTTTGGAATGACAATTAGTATCTTTATTACATTAGCGAAAACTTATTTGTTCTTGTTCATTTCTATAGCAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGGTAATCTATTATTAACAACTTCTTTTCAACTCTTTTCACTGTAAAGGAATACCATATTCTATATTCACGACTTGCTCAAACAAGAGAAAGAAACAAACATAAAATTCTTTAGAGATATTACAATATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTTAGGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAATTAATCGCATCGGAGCGTTTCCGCTGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAATGGATATTTGAAAGAAACGATTGCTTAATTACAGTGTTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCAAATTGAAGTCTAAAATAAGTAAATCCGTTGATTAAAGAGGAATTGGAAATTACTAAGGTTCCGTTTTGATCTAAAGAAATGGGGTTTCTTTCGTTTTGTTTGTTTGGTCACTACATACAAATCCAAACTATTGATTCATGAGAATTGCAGCTTAATTTAGATTGAAACTATATATTTCGAAATATATAGTTTCAATCTACTCTACTCTTTCAGATCAAGACTAAGATTAATACAATAACTGTACCTACATTAATTCACACCCCTTAAGATTTAATTAGGAATTGATTATACATTTTTTTTCCTGGTCTGATCAATAAGGTCATGAAAAACATTTAGATTTATTTATCTCTTTTTTTACTACATATAATGGATTTTCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCGGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTTGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGTTGCGTGTCACAATCGTACTTCGTTAAACGATTGTGCGGCACTTGTCCTCGCTCAGGAACAAGTCAGCCAATTCTGATTCGAATCACCTTCAGCACACCGGGTGCCTCTCGCAACGACTATCCCCGTTTCTAGAGGGAAACAGGTTTAGAGAAAAGGGTTTTCGCAAACAATTTAGAAGAATGTTTGAGAAAAAGAATGTATCGTAAGGCTAGAAAGCAAATAAGGGACAACAACGGCTTTATAGCTTACAACTCTCGGGTATGCAAGTATGATGATTAGTCTCACTCGCATATAGTACATTATAAGCTTTTACAAGAGTGGCATGGTTGCACGTACAAAGTGCTACGCCGTCGCGAGAAATGAAAAGTAAAGGAAAGCGGTAAACAAACATAATGAAATACATAATATGAAATGACATAGGGTTCGGAACGGTAATGCGGCCATAGGCAACACGCCCTGGACAAGCATGACCGTGACATCCTCCCCCACTTAAATGATTGACGTCCCTGTCAACCGTCGTTGTTCGAACTCGACAACCTTGGCAGCATCTTGTTGCAAGTCTTCAACACGTTCCCAACTGATCTCTGCATCTGGCAGTCCCTTCCACTTGACGAGAAACTCCTGAACATCTCTTCTCGGTCTACCCACTCGACGGGTACGTTCCGCCAAAACTTCTTCTACTTCTTTATCTTCAGGGTTGGACATTGTAACTGGAGGTCTGACCGACTGATTACGAGTGGCATCATCTGGATCGGGATAATGGGGTTTCAAATTGCTTACGTGGATGACGGGGTGAATCTTCATCCACGGCGGCAGTTGAACCCGATATGATACTTTCCCGACCTTCTTGATTACTTCAACAGGCCCTTCATATTTTTGCACAAGACGCTGATCTCTTTTACTCCGAAATCGGAGCTATTCTGGTCTCAGTTTCATCAACACCTTATCTCCGGCTTGGAACTCCAAGGGTCGACGTTTCTGATCCGCCCATTTCTTCATTCGTTTAGACGCCTTCTCCAAATAGGTTCGAGCCATCTCGGCAGTTTGGTTCCACTCCTTCGTGAAGTTGAACGCTTGAGGGCTCTTCCCTGCATAAGGATGGTCCACAATGTGAGGCATGAGTGGTTGTCTCCCACTAACTATCTCAAAAGGAGTCTTTCCGGTAGACGAGCTCTTCTGACAGTTAAAACTGAATTGTGCCACATCAAGCATCTCGACCAAATTCTTCTGCCTGGCATCTATAAAATGACGCAAGTATTCCTCAAGCATGCTATTGAACCGTTCTGTCTGCCCATCAGTTTGAGGGTGATAGCTCGACGAGATATTTAAATTCGAGCCAAGCATTTGGAATAACTCCGTCCAGAAGGTTCCTGTGAATCTGCCATCTCTGTCACTCACGATACTCGCTGGGACACCCCAGAACTTGACAACATTCTTAAAGAATAGTTGTGCCGTCATTTCGGCTGAGCACATCTTTATTGTTGGGATAAATGTGGCGTATTTCGAGAATCTGTCCACCACTACGAGAAGTGCTTCAAAATCCCCGACTTTGGGCAAGTGGGTAATGAAATCGAGGGAGACGCTCTCCCACGGTCGTACTGGGATTGGCAGGGGTTCTAACAGCCCGACTATCTTCGCTCGCTCAACCTTGTCTTGTTGACAAATAAGGCAGGTCTTGGTAAACTGCATAACATCGTCGCGGAGGTTCGGCCAGTAGTAACCTTGCTTCAACAATGCATAGGTTCTCTGCCAACCCGCATGACCTGCTCACCGAGTGTTGTGGCACTCTTCTAACAACAGTTTCCTCAAACTCCCCGCTCGGGGTACATACAGACGGTTACCCCTGGTGAACAGGAGACCTTCTTCTACCCAAAACTGTCTTGTCTTTCCTTCTTTGGCTAGCTGGATTATGGCTTGGGCAGCCGGATCATTCTGCAAATGGTCCCTGATGGACTCACGAACTTAGCCTTTTAGTCTACTAGCTTTCAAGTGTGCTAACATGCACAGGGCCGCATGTTCACTCTTTCGGCTAAGGGCGTCGGCGGCTTGATTGGTTCGCCCTGATTTATGCTCGAACTGGAAGTCGAATTCGGCAAGGCACTCTTGCCAACGAGCTTGTTTCGATGACAACTTAGGTTGGGTGAAGAAGTGGCAGATCGAGCTGTTGTCGGTCTTGACGACAAACGTTGCACCCAACAAGTACTGTCTCCAGGCCCTTAGACAATGGACCACGGCCAACATCTCCTTCTCGGAGGCAGCATACCTCCTTTCGGCCGCATCAGCTTGCGGCTCTCGTATGCGATAGGGTGGCCGTCTTGGAGGAGGACACCCCCTAACGCAAAATCTGATGCATCTGTTTCCACTTCAAAGGGTTTTGTCACATCCGCTATCCCGAGGACCGGGCTTTTTATCATAGCTTTCTTTAATTCATTGAAAGCTTCTTCGCACCTTGGAGTCCAACTCCATTTCACATCCTTCTTCAACAGTTCCGTCAAGGGTTCTGCTCGTCTCGAGAATCCTTCGACGAATCGCCTGTAGTAATTTGCTAACCCGAGGAAGGACCGTAATTCAGTCACAAAAGTCGGGACCTTCCAATCTCGGATGGCCGAGATCTTACCTTCTTCCATACCAATTCGACCGCATTCGATCATATGTCCGAGAAAATTGATGCGTTGTTGGGCGAAGGAGCATTTCTCCCTCTTCACATACAGTTGACTCTGCCTCAACTTTTCGAAGACCAACTGCAGATGTACTTGGTGTTCTTCCATGGACTGGCTATAGACCGTAATTCAGTCACAGAAGTCGGGACCTTCCAATTTCGGATGGCCGAGATCTTACCTTCTTCCATACCAATTCGACCGCATTCGATCATATGTCCGAGAAAATTGATGCGTTGTTGGGCGAAGGAGCATTTCTCCCTCTTCACATACAGTTGACTCTGCCTCAACTTTTCGAAGACCAACTGCAGATGTACTTGGTGTTCTTCCATGGACTGGCTATAGACCACGATGTCGTCCAAGTAAACCACCACAAATCTATCCAGATATTCGTGGAACACCTGGTTCATCAAAGTACAGAAAGTGGCAGGGGCATTGGTGAGACCGAAAGACATGACCATGAACTCAAAAGCCCCATATCTTGTGACACATGTGGTTTTCGGCTCATCCCCCTCTGCAATACGAACTTGATAGTATCCTGACCGGAGATCAAATTTTGAAAAGTACTTGGCCCCATGGAGGCGGTCGAACAAGTCGGTGATTATGGGTAGTGGATATTTGTTCCGAACTGTGAGTTTATTCAAGGCCCGGTAATCGATACACATACGGAGGCTTCCATCCTTCTTTTTCTGGAACAGCACAGGGGCTCCATAAGGAGCTTTGGCAGGTCTGATAAACCCTGCACTCAACAACTCGTCTAACTGTTTTCGCAGCTCCGCCAACTCTGGCGGGGCCATGCGATAGGCGTTCTTTGCGGGGGGGTTTTGCCCCAGGCAACAACTCAATCTCGTGGTCTATCTCCCTTCGCGGAGGTAGAGACTTTGGCAAGCTGTCAGGCATAACATCGCCATATTCTCGTAACACACCTTGGATCTCATCTGGTATGGTCTCTTCTAGACTTTTGTCCTCAATCATAGGGATGGCCATGAACGTGGGTTCATCACGGACTAGTCCCCTCTTCAGCTGGAGGGCTGATATCATCTTCAACCCATTCGGTTGTTTGATACTAGCAGAGACAACAGTGGGGTTAGACCCCGTGATCGCCAGACACTTCGCCAGGGGCATGGGGATCACCTTGTGTTCGAGGAGGAACTCCATCCCCAACACAACGTCAAAATCGTCCATCTTCACAATCACAAAATTGGTCTGGCCACTCCACGACCCGAACTTTATGTTCGTTCGTCTCGCGATTCCCATTATAGATAGGGCTGCAGAATTAACGGCCTTCATTTTTCCTGTGTCTTTGTCCCAACGTAGGTTGAGTCGTTGGGCCTCTGTTTCCGTCATGAAGTTATGGGTAGCACCGAAATCAACCAACATGTTCTTGGCCAACTTCTGGTTCACCCACGCTTCTACATACATGAGCCCCTTTTCCACAGAGTCTTTACCCCCGTCTGCCTTCTTTTGAAGGGCGGATAAGAACTTGAGGGCCCTCATGCGAGGGTTCTCCCCCTCTTCTCCGGCTGCTACACCCGGCTCCATAGTCTCTCTTTCACGGGCCGAATCCTCTGCCAATGAAGCTTGGAGGGCCTTGAGGGCCGCTTTGTTCGGGCACTCGACCAGTGTATGAGGCCCTTTACACAAGAAGCAAGTAGGGGGACCTCTTCTATAATTGTTCTGGGGCTGACCTTGTGCATTCCCGAAATATCCACTTCTTTGATAGTAGGGTTTACGATCCGCCCCTCCGGTCCTGTCTCCTCCCCCACTTTTAGGGGAACCAGATCTATTTGATTTATTACCTCCACTAGAGGAGGGTTGGTTTCGTTTCTGCTCTTGGGGCGCATCGTTGTTAAGATCAAATAACCGTTCTGCAGCAGCGTAGGCTTCTGAAAGAGTTTGGACCCTTTGTTCATACAACTTCGTCTTGGCCCACGTCTTTAACCCTTCGACAAAGCAGAAGACTTTGTCTTTCTCTGACATATCCCGGATATCTAACATTAGTCCGGCAAATTGCTTCACATAATCCCTGACAGTCTCAGTGTGTTTTAACTCACGTAACTTTCGCCTTGCCATTATTTCCACGTTCTCGGGGAAAAACTGAGAGCGTAAATCTCGCTTCAGTTTTTCCCAGGTGTCGATCGTACATCGACCCTCTTGGATGTCCATATAACGGGACCTCCACCACAACTTGGTGTCGTCTGCAAGGTGCATTGTCGCCAGTGTAATCTTCGACTCTTCAGTCGTCGTGTTTGTGGCTTTGAAGTATTGTTCCATGTCAAATAGGAAATTCTCCAAAGCCTTTGCTTCCCGAGCCCCACTGAAGGGCTTCGGTTCAGGTACCTTCACTCTGTTGAACGGCCCCACACCTCCAGCTGGTGTTTGGTTTCCTACCGCTCGCATGGTGAGGTTTACTTTCGCATTCACATCTGCGATCTTCGCCCTGACAGCGTCAAGGGCGGTTCTGAAATCTTCCGATAAGTCAGTCACCATCTGAATTATCGCCTTCTGGGAGCTATCTAATTCTTCGACTCGCTCCTCCACACAGGCCATTGAGCCCGACGAGCTTTCTCCTCGCTCAAAGCTACTAGATCTGGTAGCTTTTTCTTCCAGGGTCTCGACCCTTTGCAACAGTTCTTGGACGGGCATTCCGTCCAGGCGGCCAGCTACAGCATCGATTATGTCAGCTTTCTCTGCGACTTCCTGTACCCGCATCTCCAAGAAACGAAGGCTATCAGGCATATCTTGTAAATAGAGCATCTGCTCTTCCATCTCCACCAACCTGTCCGCTTGGGACTTGTTAAGTTGTTTAGGTGCCGACATGATTGCTGATTTCTCACTCAAGAAGCCAACTGGGCTCTGATACCAACTGTCACAATCGTACTTCGCTAAACGATTGTGCGGCACTTGTCCTCGCTCAGGAACAAGTCAGCCAATTCTGATTCGAATCACCTTCGGCACACCGGGTGCCTCTCGCAACGACTATCCCCGTTTCTAGAGGGAAACAGGTTTAGAGAAAAGGGTTTTCGCAAACAATTTAGAAGAATGTTTGAGAAAAAGAATGTGTCGTAAGGCTAGAAAGCAAATAAGGGACAACAACGGCTTTATAGCTTACAACTCTCGGGTATGCAAGTATGATGATTAGTCTCACTCGCATATAGTACATTATAAGCTTTTACAAGAGTGGCATGGTTGCACGTACAAAGTGCTACGCCGTCGCGATAAATGAAAAGTAAAGGAAAGCGATAAAGGAAAGCGGTAAACAAACATAATGAAATACATAATATGAAATGACATAGGGTTCGGAACGGTAATGCGGCCATAGGCAACACGCCCTGGACAAGCATGACCGTGACACTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGTTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCATTGGGAATGGAGTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGCATGGGATTATAATTAA ATGGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGACAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGATACGTCATGGCATGGGATTATAATTAA ATGGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACCGACAACAAGATGGACTTTACCCCGACTAAGAATAGATCAACTATTAAATCTCGGATGGAAATTTCTTTTACCTATATCTCTCGATACGTCATGGCATGGGATTATAATTAA MECERLPFDLPEAEEELVAGYQTDNKMDFTPTKNRSTIKSRMEISFTYISRYVMAWDYN Homology
BLAST of Lsi10G000350 vs. ExPASy Swiss-Prot
Match: P06255 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Marchantia polymorpha OX=3197 GN=ndhA PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-06 Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Lsi10G000350 vs. ExPASy Swiss-Prot
Match: Q8Z076 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=ndhA PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-06 Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of Lsi10G000350 vs. ExPASy Swiss-Prot
Match: Q3M9K9 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=ndhA PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-06 Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of Lsi10G000350 vs. ExPASy Swiss-Prot
Match: B0BZW2 (NAD(P)H-quinone oxidoreductase subunit 1 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ndhA PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 7.8e-06 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0
BLAST of Lsi10G000350 vs. ExPASy Swiss-Prot
Match: Q85FH0 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=ndhA PE=2 SV=2) HSP 1 Score: 50.4 bits (119), Expect = 7.8e-06 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0
BLAST of Lsi10G000350 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein ) HSP 1 Score: 50.1 bits (118), Expect = 7.3e-07 Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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