Lsi09G019010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G019010
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LOB domain-containing protein
Location	chr09: 27864606 .. 27867596 (+)
RNA-Seq Expression	Lsi09G019010
Synteny	Lsi09G019010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAATCCTTTATTATCTATCCCCTACAATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGGTAAATTAAAATTTAATTGATTGAGTTATGTTCCGGTTGACTATATTTGTTCTCCCTACTTTTCTTTTCTAATTTTGCATAATTGTTACTAATTTTTCTAATTTGGAATTTTACTTGTTTCAAACAAAGGCTAGTTTTTGAAGCTATTTCAGAAATGGGAAGTTGAGTTTTAAAAAAATAGGGTGTTTGTTTCAGATTTGAAAACCCAAATAAGGAAACTTAAAATGGGATTTAGAGATGTAGGGCTGTTATGCCCTTAAATACTAGGCTACTGCCCTTAAATGGGTAAAGAAAAGCTAGTAATTTTAATTAGGATGGCAGTTTATTTATTTTTCCCTAGCGAGTTTACTGAAATCTAGAGCTATCAGTCCTTTGTTTGATTATTATCAAATCATTTCTTCGGCGGTTACTGCGGTAATATTCCCTAATCAAAATTACCTGTTTTTTTTTTTGGGAGTGTTTTGGGGTTTTTTTGTTTTATTATTATTATTATTATTGCAGTTATTCAGGAATTGGTCGGTCTATTGCCTTAAAGTTAAGCTTTTGATTAGAGAGACAAGAGTCATTTCCTACGTTTCCCCAATTTTTAGCTTCCTGTCAGTGTATCTTCTAAAAAACAATCTCAATGTCAATTGTATTCTTTACTTCAAATAATAATTTCTACACTTTTTTTCCCTTCTAAAACCATTAGTAATCGCTGTATTTTGTTTCTTATAAGGTTTTATTATGTTTTAAAAAAAAAAAAAAAAAAAAAAAATTGGAATGGTTTCTTGAAAAAGTGTTTAGGTGATGATTTAGTTTCTATATGTTTAGAAATGTAATTATGCATGTCAGTTTTGGTAATTTTGGAAACTTTTTTTTTTACCCACAATTTTAATTTTTCTGTTCTCTACATTTATGAATAGTTTTTAAATTTTAAACTAAAAACCTATTTTTAAAGATTTTTGTTTTTGTTGTTTTTATATTTGGATAAGATTTCAAAAGTATCAGTTACAAAAATAGGAAAAACAAATAAATTAGTATAATTTTGAAGAATATAAAACTAAAAATGAAGGTTCTATTAATTAGGACCTAAGTTTTTGTGTTAAAAGTTTCAAAGTTTGATGGTAAGAAAATAATATATGAATATGAATATGAATCAAGGTAAATGAAGCTTATGGACTACAACTTTAAAATTAAGGTATTTCATTATTGCTCATTTAAACAAGAGTTTTAACATTATGGTCTTGATTGTTACATTTATTTTTAAGTCTTTAATTGTTTAAAAATTAAGAAATGGAGTTGTCATAGAAAGGGGTATATATTTTATTTTTTTAATCTTGGTTATGTCTATAATATAAAGAGCTCTCTAATCCAAATACGACACAGTTCCAATAGTATTTTCTAAAAAATATTTATTTTTTTCCTATTTTTAGAAAAATATTTGATGTATACTTGGGAGTATATAGTACTTTTACTTTTCTTTACTGCATATTAGCTATACCTACTATATAAATGTCTGTGTACTATTAACAGTATGGTTGGTAAATATTTGTTTTAGAAAATATATAGTACAAAAATGAATTTTTATACTTTCTAATTTTCACTTTTAAAAATTATTTTACCTAGTATCGTACAAAAATTATTATTATTATTATTATTATTATTTTTGCATTGAAATATGTTTTAAGTTTTAACAATGTTTTTGTCAAAAGAAAATTTAACGTACGCTTTTTGTCGTTGAAAAATGCACGAATCCTTGTAGTACTAATACTATCTAATTTCTATATTTTCCATTATTATTGTATATTTTGTTATTTAAATACCTATCTTAAAACAAAAATTTTGAGAGTACAAAAATCAAAATGGAACGAAAATATATCATTATTTTTTTTTTCTAATGTAAGGTGAAAAGTTAAAAAAAAATTCCATTTTTTTCTTTTGTGAAGGCATTTTAAAGTGGGTAAAAAAAATAGAAATTAAATTGGAAGATTATTATTATTATTATTATTAGAAGGTTAATATATGTAAATAAAAAACTTTGGCAGGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGAAACTTTTTTTCTCTTTTTTAAAAAAAAATTAAATTCTTGCCTCTTTGATTCCTCTTTTGTCAAAAATTTTACTGGAAAATTGAAGGGTGCTAGAATTTGTTTTTTTTTTCTTTTAACAAATATTTTATTCGAGTTAAAAGGCAAGATAAAGAAAAAGAAGAAAAAATATATTAAAAAATTAATAACCCAACAACCTTTTATTTAT

mRNA sequence

AAAAAAAAAATCCTTTATTATCTATCCCCTACAATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGTTTATTTATTTTTCCCTAGCGAGTTTACTGAAATCTAGAGCTATCAGTCCTTTGTTTGATTATTATCAAATCATTTCTTCGGCGGTTACTGCGTTATTCAGGAATTGGTCGGTCTATTGCCTTAAAGTTAAGCTTTTGATTAGAGAGACAAGAGTCATTTCCTACGTTTCCCCAATTTTTAGCTTCCTAAAAATATTTGATGTATACTTGGGAGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGAAACTTTTTTTCTCTTTTTTAAAAAAAAATTAAATTCTTGCCTCTTTGATTCCTCTTTTGTCAAAAATTTTACTGGAAAATTGAAGGGTGCTAGAATTTGTTTTTTTTTTCTTTTAACAAATATTTTATTCGAGTTAAAAGGCAAGATAAAGAAAAAGAAGAAAAAATATATTAAAAAATTAATAACCCAACAACCTTTTATTTAT

Coding sequence (CDS)

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGTTTATTTATTTTTCCCTAGCGAGTTTACTGAAATCTAGAGCTATCAGTCCTTTGTTTGATTATTATCAAATCATTTCTTCGGCGGTTACTGCGTTATTCAGGAATTGGTCGGTCTATTGCCTTAAAGTTAAGCTTTTGATTAGAGAGACAAGAGTCATTTCCTACGTTTCCCCAATTTTTAGCTTCCTAAAAATATTTGATGTATACTTGGGAGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGA

Protein sequence

MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFSLASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKIFDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLSK

Homology

[Close]

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 7.9e-65
Identity = 162/303 (53.47%), Postives = 183/303 (60.40%), Query Frame = 0


Query: 9   GGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGA 68
           G GG G++  GG  GGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVFGA
Sbjct: 17  GCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGA 76

Query: 69  SNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFSLASLLKSR 128
           SNVSKLLLHIPVH+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQ             
Sbjct: 77  SNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQ------------- 136

Query: 129 AISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKIFDVYLGVV 188
                                                                     VV
Sbjct: 137 ----------------------------------------------------------VV 196

Query: 189 SLQAELTYLQAHLATLELPSPPNPPPPPPPPS--FPGQQTPLSISDLP-SASSLPATYDL 248
           +LQAE++YLQAHLA+LELP P   P P P P   F     PL+I+DLP S S LP+TYDL
Sbjct: 197 NLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDL 248

Query: 249 SSLFD-PMAQPAWAMQQQR-LDPR-QFAGGGGGSSTAAGEG-----DLQALARELLHRHG 301
           +S+FD   +  AWA QQ+R +DPR Q+      SS A G G     DLQALA ELLHR G
Sbjct: 257 ASIFDQTTSSSAWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQG 248

[Close]

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-56
Identity = 150/304 (49.34%), Postives = 168/304 (55.26%), Query Frame = 0


Query: 8   SGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFG 67
           S  G P ++S      GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 68  ASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFSLASLLKS 127
           ASNVSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQ            
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQ------------ 121

Query: 128 RAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKIFDVYLGV 187
                                                                      V
Sbjct: 122 -----------------------------------------------------------V 181

Query: 188 VSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSS 247
           VSLQ EL+YLQAHLATLEL   P P PP  P S  G    LSI+DLP+ S  P+ YDLSS
Sbjct: 182 VSLQTELSYLQAHLATLEL---PQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSS 222

Query: 248 LFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLH--RHGAPPCSGAS 307
           +F+P+    WAMQQQ   P     G   SS   G G+LQALARE +H  +  A P  G S
Sbjct: 242 IFEPVMSSTWAMQQQP-RPSDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTS 222

Query: 308 SPQS 310
              S
Sbjct: 302 GSAS 222

[Close]

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-37
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 16  ASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL 75
           AS+G G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 76  LHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIY 119
           L++P+H R +AVVTI YEAQARL DPVYGCV+HIFALQQQ  +
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAF 104

[Close]

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-37
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 15  TASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 74
           T +  GG G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+
Sbjct: 3   TGNLNGG-GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKM 62

Query: 75  LLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ 116
           LL +P+HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ Q
Sbjct: 63  LLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQ 102

[Close]

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 25  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRL 84
           G G PCGACKFLRRKCV GC+FAPYF  EQGAAHFAA+HKVFGASNVSKLL H+P+  R 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 85  DAVVTICYEAQARLRDPVYGCVAHIFALQQQF--IYFSLASLLKSRA 130
           +A VTI YEAQARLRDP+YGCVAHIFALQQQ   +   LASL  + A
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAA 109

[Close]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL
Match: A0A0A0KEN5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.4e-109
Identity = 231/312 (74.04%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTAS GG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFP  Q PLSISDLPSASSLP
Sbjct: 181 ------VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPA-QPPLSISDLPSASSLP 240

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPP 300
           ATYDLSSLFDPMAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPP
Sbjct: 241 ATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPP 240

Query: 301 CSGASSPQSLSK 313
           CS ASSPQSLSK
Sbjct: 301 CSDASSPQSLSK 240

[Close]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL
Match: A0A5D3DLI5 (LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00390 PE=3 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 7.1e-109
Identity = 231/312 (74.04%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTASAGG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASAGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAELTYLQAHLATLELPSPPNPPPPPPP SFP  Q PLSISDLPSASSLP
Sbjct: 181 ------VVSLQAELTYLQAHLATLELPSPPNPPPPPPPQSFPA-QPPLSISDLPSASSLP 240

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPP 300
           ATYDLSSLFDPMAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPP
Sbjct: 241 ATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPP 240

Query: 301 CSGASSPQSLSK 313
           CS ASSPQSLSK
Sbjct: 301 CSDASSPQSLSK 240

[Close]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL
Match: A0A6J1KML3 (LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111494694 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.0e-94
Identity = 212/322 (65.84%), Postives = 220/322 (68.32%), Query Frame = 0


Query: 1   MSANPSTSGG--GGPGTASAGGGVG-GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 60
           MSANPSTSGG  GG G    GGG+G GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA
Sbjct: 1   MSANPSTSGGGSGGGGGGGVGGGLGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 60

Query: 61  HFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFI 120
           HFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQ  
Sbjct: 61  HFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQ-- 120

Query: 121 YFSLASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSF 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LKIFDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSAS 240
                    VVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  
Sbjct: 181 ---------VVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPP 240

Query: 241 SLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS-------STAAGEGDLQALAR 300
           SLPATYDLSSLFDPMAQPAW + QQRLDPRQF GGGGG        ST AGEGDLQALAR
Sbjct: 241 SLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGGGGGGSGLSTVAGEGDLQALAR 250

Query: 301 ELLHRHGAPPCSGASSPQSLSK 313
           ELLHRHGAPP S +SSP S+SK
Sbjct: 301 ELLHRHGAPPSSDSSSPPSVSK 250

[Close]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL
Match: A0A6J1HHP1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464166 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.9e-94
Identity = 212/320 (66.25%), Postives = 219/320 (68.44%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSANPSTSGGG G G    G G G GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH
Sbjct: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIY 120
           FAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQ   
Sbjct: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQ--- 120

Query: 121 FSLASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFL 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 KIFDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASS 240
                   VVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  S
Sbjct: 181 --------VVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPPS 240

Query: 241 LPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQALAREL 300
           LPATYDLSSLFDPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQALAREL
Sbjct: 241 LPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALAREL 248

Query: 301 LHRHGAPPCSGASSPQSLSK 313
           LHRHGAPP S +SSP S+SK
Sbjct: 301 LHRHGAPPSSDSSSPPSVSK 248

[Close]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL
Match: A0A6J1H4Q1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460030 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.5e-93
Identity = 208/313 (66.45%), Postives = 215/313 (68.69%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGG      GGG GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGG------GGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+Q     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAEL+YLQAHLATLELPS      PPPPP+F   Q P+SISDLPSASSLP
Sbjct: 181 ------VVSLQAELSYLQAHLATLELPS------PPPPPNF-AVQPPVSISDLPSASSLP 229

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQF-AGGGGGSSTAAGEGDLQALARELLHRHGAP 300
            TYDLSSLFDPMAQPAWAMQQQRLD RQF +GG GGSST AGEGDLQALAR LLHRHG P
Sbjct: 241 VTYDLSSLFDPMAQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGP 229

Query: 301 PCSGASSPQSLSK 313
           PCS ASSP SLSK
Sbjct: 301 PCSDASSPPSLSK 229

[Close]

BLAST of Lsi09G019010 vs. NCBI nr
Match: XP_004145058.1 (LOB domain-containing protein 18 [Cucumis sativus] >KGN46236.1 hypothetical protein Csa_005401 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 5.1e-109
Identity = 231/312 (74.04%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTAS GG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFP  Q PLSISDLPSASSLP
Sbjct: 181 ------VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPA-QPPLSISDLPSASSLP 240

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPP 300
           ATYDLSSLFDPMAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPP
Sbjct: 241 ATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPP 240

Query: 301 CSGASSPQSLSK 313
           CS ASSPQSLSK
Sbjct: 301 CSDASSPQSLSK 240

[Close]

BLAST of Lsi09G019010 vs. NCBI nr
Match: KAA0040004.1 (LOB domain-containing protein 18-like [Cucumis melo var. makuwa] >TYK24497.1 LOB domain-containing protein 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-108
Identity = 231/312 (74.04%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTASAGG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASAGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAELTYLQAHLATLELPSPPNPPPPPPP SFP  Q PLSISDLPSASSLP
Sbjct: 181 ------VVSLQAELTYLQAHLATLELPSPPNPPPPPPPQSFPA-QPPLSISDLPSASSLP 240

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPP 300
           ATYDLSSLFDPMAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPP
Sbjct: 241 ATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPP 240

Query: 301 CSGASSPQSLSK 313
           CS ASSPQSLSK
Sbjct: 301 CSDASSPQSLSK 240

[Close]

BLAST of Lsi09G019010 vs. NCBI nr
Match: XP_023548284.1 (LOB domain-containing protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 2.4e-95
Identity = 211/313 (67.41%), Postives = 219/313 (69.97%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGG G+ +AGGG GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGG-GSGTAGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFS 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQQQ     
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQQQ----- 120

Query: 121 LASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKI 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 FDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLP 240
                 VVSLQAEL+YLQAHLATLELPS      PPPPP+F   Q P+SISDLPSASSLP
Sbjct: 181 ------VVSLQAELSYLQAHLATLELPS------PPPPPNF-AAQPPVSISDLPSASSLP 234

Query: 241 ATYDLSSLFDPMAQPAWAMQQQRLDPRQF-AGGGGGSSTAAGEGDLQALARELLHRHGAP 300
            TYDLSSLFDPMAQPAWAMQQQRLD RQF +GG GGSST AGEGDLQALAR LLHRHG P
Sbjct: 241 VTYDLSSLFDPMAQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARSLLHRHGGP 234

Query: 301 PCSGASSPQSLSK 313
           PCS ASSP SLSK
Sbjct: 301 PCSNASSPPSLSK 234

[Close]

BLAST of Lsi09G019010 vs. NCBI nr
Match: KAG7026047.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.6 bits (919), Expect = 5.4e-95
Identity = 214/324 (66.05%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-----GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GGGVG     GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QFIYFSLASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPI 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 FSFLKIFDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLP 240
                       VVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLP
Sbjct: 181 ------------VVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLP 240

Query: 241 SASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQAL 300
           S  SLPATYDLSSLFDPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQAL
Sbjct: 241 SPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQAL 252

Query: 301 ARELLHRHGAPPCSGASSPQSLSK 313
           ARELLHRHGAPP S +SSP S+SK
Sbjct: 301 ARELLHRHGAPPSSDSSSPPSVSK 252

[Close]

BLAST of Lsi09G019010 vs. NCBI nr
Match: KAG6593707.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358.6 bits (919), Expect = 5.4e-95
Identity = 214/324 (66.05%), Postives = 221/324 (68.21%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-----GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GGGVG     GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGVGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QFIYFSLASLLKSRAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPI 180
           Q                                                           
Sbjct: 121 Q----------------------------------------------------------- 180

Query: 181 FSFLKIFDVYLGVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLP 240
                       VVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLP
Sbjct: 181 ------------VVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLP 240

Query: 241 SASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQAL 300
           S  SLPATYDLSSLFDPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQAL
Sbjct: 241 SPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQAL 252

Query: 301 ARELLHRHGAPPCSGASSPQSLSK 313
           ARELLHRHGAPP S +SSP S+SK
Sbjct: 301 ARELLHRHGAPPSSDSSSPPSVSK 252

[Close]

BLAST of Lsi09G019010 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 248.8 bits (634), Expect = 5.6e-66
Identity = 162/303 (53.47%), Postives = 183/303 (60.40%), Query Frame = 0


Query: 9   GGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGA 68
           G GG G++  GG  GGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVFGA
Sbjct: 17  GCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGA 76

Query: 69  SNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFSLASLLKSR 128
           SNVSKLLLHIPVH+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQ             
Sbjct: 77  SNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQ------------- 136

Query: 129 AISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKIFDVYLGVV 188
                                                                     VV
Sbjct: 137 ----------------------------------------------------------VV 196

Query: 189 SLQAELTYLQAHLATLELPSPPNPPPPPPPPS--FPGQQTPLSISDLP-SASSLPATYDL 248
           +LQAE++YLQAHLA+LELP P   P P P P   F     PL+I+DLP S S LP+TYDL
Sbjct: 197 NLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDL 248

Query: 249 SSLFD-PMAQPAWAMQQQR-LDPR-QFAGGGGGSSTAAGEG-----DLQALARELLHRHG 301
           +S+FD   +  AWA QQ+R +DPR Q+      SS A G G     DLQALA ELLHR G
Sbjct: 257 ASIFDQTTSSSAWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQG 248

[Close]

BLAST of Lsi09G019010 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-57
Identity = 150/304 (49.34%), Postives = 168/304 (55.26%), Query Frame = 0


Query: 8   SGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFG 67
           S  G P ++S      GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 68  ASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIYFSLASLLKS 127
           ASNVSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQ            
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQ------------ 121

Query: 128 RAISPLFDYYQIISSAVTALFRNWSVYCLKVKLLIRETRVISYVSPIFSFLKIFDVYLGV 187
                                                                      V
Sbjct: 122 -----------------------------------------------------------V 181

Query: 188 VSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSS 247
           VSLQ EL+YLQAHLATLEL   P P PP  P S  G    LSI+DLP+ S  P+ YDLSS
Sbjct: 182 VSLQTELSYLQAHLATLEL---PQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSS 222

Query: 248 LFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLH--RHGAPPCSGAS 307
           +F+P+    WAMQQQ   P     G   SS   G G+LQALARE +H  +  A P  G S
Sbjct: 242 IFEPVMSSTWAMQQQP-RPSDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTS 222

Query: 308 SPQS 310
              S
Sbjct: 302 GSAS 222

[Close]

BLAST of Lsi09G019010 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 158.7 bits (400), Expect = 7.7e-39
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 16  ASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL 75
           AS+G G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 76  LHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQFIY 119
           L++P+H R +AVVTI YEAQARL DPVYGCV+HIFALQQQ  +
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAF 104

[Close]

BLAST of Lsi09G019010 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-38
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 0


Query: 15  TASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 74
           T +  GG G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+
Sbjct: 3   TGNLNGG-GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKM 62

Query: 75  LLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQ 116
           LL +P+HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ Q
Sbjct: 63  LLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQ 102

[Close]

BLAST of Lsi09G019010 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 27  GGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDA 86
           G PCGACKFLRRKC  GC+FAPYF  EQGA+HFAA+HKVFGASN SKLL H+P+  R +A
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 87  VVTICYEAQARLRDPVYGCVAHIFALQQQFI 118
            +TI YEAQARL+DP+YGCV+HIFALQQQ +
Sbjct: 69  AITISYEAQARLQDPIYGCVSHIFALQQQVV 99

The following BLAST results are available for this feature:

BLAST of Lsi09G019010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22131	7.9e-65	53.47	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
O81323	1.8e-56	49.34	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
Q9SLB7	1.1e-37	75.73	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
O22132	4.1e-37	75.25	LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 S...	[more]
Q5UG13	1.2e-36	73.83	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of Lsi09G019010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN5	2.4e-109	74.04	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV...	[more]
A0A5D3DLI5	7.1e-109	74.04	LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1KML3	1.0e-94	65.84	LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11149469...	[more]
A0A6J1HHP1	2.9e-94	66.25	LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464...	[more]
A0A6J1H4Q1	2.5e-93	66.45	LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460...	[more]

BLAST of Lsi09G019010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145058.1	5.1e-109	74.04	LOB domain-containing protein 18 [Cucumis sativus] >KGN46236.1 hypothetical prot...	[more]
KAA0040004.1	1.5e-108	74.04	LOB domain-containing protein 18-like [Cucumis melo var. makuwa] >TYK24497.1 LOB...	[more]
XP_023548284.1	2.4e-95	67.41	LOB domain-containing protein 18 [Cucurbita pepo subsp. pepo]	[more]
KAG7026047.1	5.4e-95	66.05	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6593707.1	5.4e-95	66.05	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Lsi09G019010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45420.1	5.6e-66	53.47	LOB domain-containing protein 18	[more]
AT4G00220.1	1.3e-57	49.34	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G42430.1	7.7e-39	75.73	lateral organ boundaries-domain 16	[more]
AT2G45410.1	2.9e-38	75.25	LOB domain-containing protein 19	[more]
AT3G58190.1	1.2e-36	73.63	lateral organ boundaries-domain 29	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 29..116 e-value: 2.1E-35 score: 121.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 28..130 score: 21.043819
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..312
None	No IPR available	PANTHER	PTHR31529:SF4	LOB DOMAIN-CONTAINING PROTEIN 18	coord: 1..298
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G019010.1	Lsi09G019010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus