Lsi09G018120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G018120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCoiled-coil domain-containing protein 92
Locationchr09: 26924734 .. 26930012 (+)
RNA-Seq ExpressionLsi09G018120
SyntenyLsi09G018120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTATTTGCCCTTCTTGAATTTGTATGGAAATTTAATAAATATTCTATGAATTTTTTAATATTTCCTGGATGTCTTAATTATGAATGATTGGAACAGTGCATGGTTGATAAGCATATTGTTGTTCCTTTGTGAAAATGATGATGCCTTTTTTAAAGACAATTTTAAATATAATGTGTTAAATTGTCTTTGCAAAGCCTCTACCAAAGTTTAGATTCTAGGCCTCTCTTTTTAACTTTATAGACTTTAGTTCCTATAGTTTGATAAAAACTCTTGTAAATAATATGAACTGTTTATGAGAATTTTATCAAATTATAAGATTTCTTATAGGACTTTTTTTATTTTTTATTTTTATATCTGTGACCGTCTGAGTCAGCTTACTCGTACTAATCTCACAGGACAATCCATCTGGCTTTATAACATACAACATTTGGGTGTTAAGGAAACTCGTAGAACATTAAATTCTAGATAGGTATCCACCATATATTGAATCTATTACTTCTTAGCCTTTTATCAAACTAAGTCTTTTATTTACCACTAGATCAATTCATGATAATTAAACCATAAAGACTATTTATGATGTATTATCAACTCATGAGGATTAAATTCTTACTTTCTCAAAATTATAGGAACCAAATTTACAATTTAACCAAAAAAAAATATTATTATCAAAGTCTCTTTTTCTTGTTATAATTAGTGTTTTAAAAACGTTAATCATGACTTTAAAAGGTTCAATCTGTTTAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAATTCCTTCTAAAACAGCATTAAGTCTTGTTAACAAAATAGATGTGTAGTGCTTTTTAGTTCAACTTTTATTGAAAAAAAAAATAACTAAATTGTGTTGTAAAAGCTAATCTCAATTAGACAATTACAAGAAGTTGGAATTGGAAATGGTTTTAAGACCTTTGTGCATACTTGTAATATTGGAGCCTCCAAATTGGAAATGGTTTTAAGGCCTTTTCCTGTTAGGTTTGAAAAATTATGAACTGATTCAAGATTGGCTTCTGCTGGATAAAGTTGAAGCAAATGTTATGCATAACAGTCACATACATAGAGTTGAATCTCTAACAATTTTACTGTTTATTTTGTTCTTTCCAAATCCGTCCTGTGATCCGCAGCTTCAGCTCTTTCCTTTCTCCTCCCGAAAAGAAGAGTGCCATGTTTCGCTGTATAATGAGGCCGTCGTGGCTGTCTCTGACTTTCTTGTGATTGTCCCGAATGCTTCGAGGGTTGCCCTCCCATATCAGCTTTCTGCCATTTCCACCGACCTCGAGGCTGTAACTGTAGTTTCGGGCATCTGTTTCGTCCCCCATGAATCGGAGAAATGCCATATAAACTGGTGCCATACCCAGTTGAAAGGCTTCAAAGTGAAGACAGAAATACTGGCCAAAACAGTGGAAGACCTGAGCAAAGGTGAAATAAGAGTATAAATAGAAGCTCATAATAAGTAAAAGATGATCTTGAATATCATCTCCTACGACGATTCGATCAGATACTTGTAAAACAACTAAGCTGAATGAACAATAGATACGTACAGTTAGCATCCATGTAGCGTTTTCAACTTCGCATGGATTAGCCTTTACATAACGATGATTAAACGTGCATCCAGAATGCATGTCAACCTTGTGATCGTCCCGAAGATGAGAAACAAGGAAAGGAATATCCCCGTCAACTGGGCAGTCTGATCCAGCATATGGGCAGGTATATGGTCTATAGTAACAGGCAGATTCGTGTTTGAGTTTGCTGTAGTAAGGCAATATCTCCTGACACCCAAATGTGCAGAATTTACAAGCCAGTTTAAGTGACTCAGCTATTTTTTCTAATGCTAGACATCTGATATCACCGAGCTCTTGTCTGCACGTCGGGCAACGATTGTCTACCCTTGTTTTACATGAAGAACAGAGGGTATGTCCATTGGGACACTGCACAAAAAAAACAAAATGTTTAAAACATTCAGCAATATCTTCTCAACTATCCCAAACTGGATAGTCATTACCTGACATTCATTCATGGAGACTCAGTATCTTTTAACATTAGATATTCATAAGATCGACAAATTAGTTGTTTTGTCCTTTCGACGAATCCACACGTATTACAGTACTAACATCAAATTAGACAAGACAGTCCTATATAAAATCACTTGGGAACTTATATATATATATATATACATATATATATCCAGGCTATAAAGCCAAGAGGGGAGCATTCAAACCTCGTCCACGGCTGCTAAGATTGAGTTTAACATAAGTTCCTAAGTGATTATTTTTTTCTTTTTTCCTTTTTTAAAGTAACTTCCTAAGTGATTTTGGATGAAAATAAACATCAAACTTAAGAAATTCAAAATGATTTAAAAACAAATTTTAAGGGACACTTGATGTAGACTATCCAAAAATGAATTCTAAAGTTATTAACTAAGAATCATTTTCTGTTGACTTTACATTTGTAAACTTTTAGATATGGTGCAACCAAACAAACTCGTAGCTAAAACTTTAAAGAAAATGTAACCACACACACAAGCAACTTAGTTTTAAAACCACTTTTATTGAAACTGTTTTATGAAAAATACTTTTTAGAAATTGGTTAAACCAGAGCTCAACTTAGTTCTGCATCCACTAGCATCAAACAATCAAAGAAGAGACCTGTTGTCTGTACTAACTCAACGCAGGGCAAAATTAACATCATTGCATAACACCACATGGTCGACATGGACCAGAAATCCAACAAAAGATTAGATCAATTACTCAATCTTATGATACCTTATTGAAAAACACAAAACCATCTACTTACCATGTGCAATGCCTATCCTAAGTGCCTCAGCCTTCTAATTCACTTAAGAAATCGTATGTTAGAAGCAAAAGGGATGCTCTGAGCATTGGTTTAGAGAAAGAGAAGCTATAGGAGATAGATGATCTCAGCATTGAATGAGTGCAAGACAATCCTATATTCTTAGCCACTTCAGCCTGCAAATATCACTGAACTCATTTTGCAACGAGGAAGGTAAAAATGAAGTAAATTCCTTTCGAATTTCACCTACGCCCTTCCGTTGACCCTGAAGCTAAGATAGTCGCTCTAGAGGTCACACAGAGGATTCCCACTTCCCCAATAGATGATATTTAACCTAATATGAAAGGGAGGTTTCTGAATTCCCCCCTCCTTGTATTAATTAAACTAATCCCAAAAAGGACCACAATTGGAACATGATTTCAGTTTCTGAACAAAGTTGACTAAAGCACAACAAATGATAGCAACACTTGTCTCTAATATACAATGAAATGGCTCTTCATTTTGCTTATCATGAGTATATAGAATAGCAGGGCTTTAGCTAACAATTTAGACAGATTCCAGACTGACAAAAGAAAGGAAGATTAG

mRNA sequence

ATGCTTCTTCAGCTCTTTCCTTTCTCCTCCCGAAAAGAAGAGTGCCATGTTTCGCTGTATAATGAGGCCGTCGTGGCTGTCTCTGACTTTCTTGTGATTGTCCCGAATGCTTCGAGGGTTGCCCTCCCATATCAGCTTTCTGCCATTTCCACCGACCTCGAGGCTGTAACTGTAGTTTCGGGCATCTGTTTCGTCCCCCATGAATCGGAGAAATGCCATATAAACTGGTGCCATACCCAGTTGAAAGGCTTCAAAGTGAAGACAGAAATACTGGCCAAAACAGTGGAAGACCTGAGCAAAGGTGAAATAAGAAATGCATGTCAACCTTGTGATCGTCCCGAAGATGAGAAACAAGGAAAGGAATATCCCCGTCAACTGGGCAGTCTGATCCAGCATATGGGCAGACATCTGATATCACCGAGCTCTTGTCTGCACGTCGGGCAACGATTGTCTACCCTTGTTTTACATGAAGAACAGAGGAATAGCAGGGCTTTAGCTAACAATTTAGACAGATTCCAGACTGACAAAAGAAAGGAAGATTAG

Coding sequence (CDS)

ATGCTTCTTCAGCTCTTTCCTTTCTCCTCCCGAAAAGAAGAGTGCCATGTTTCGCTGTATAATGAGGCCGTCGTGGCTGTCTCTGACTTTCTTGTGATTGTCCCGAATGCTTCGAGGGTTGCCCTCCCATATCAGCTTTCTGCCATTTCCACCGACCTCGAGGCTGTAACTGTAGTTTCGGGCATCTGTTTCGTCCCCCATGAATCGGAGAAATGCCATATAAACTGGTGCCATACCCAGTTGAAAGGCTTCAAAGTGAAGACAGAAATACTGGCCAAAACAGTGGAAGACCTGAGCAAAGGTGAAATAAGAAATGCATGTCAACCTTGTGATCGTCCCGAAGATGAGAAACAAGGAAAGGAATATCCCCGTCAACTGGGCAGTCTGATCCAGCATATGGGCAGACATCTGATATCACCGAGCTCTTGTCTGCACGTCGGGCAACGATTGTCTACCCTTGTTTTACATGAAGAACAGAGGAATAGCAGGGCTTTAGCTAACAATTTAGACAGATTCCAGACTGACAAAAGAAAGGAAGATTAG

Protein sequence

MLLQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGICFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDLSKGEIRNACQPCDRPEDEKQGKEYPRQLGSLIQHMGRHLISPSSCLHVGQRLSTLVLHEEQRNSRALANNLDRFQTDKRKED
Homology
[Close]
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match: A0A5A7NXG4 (Coiled-coil domain-containing protein 92 OS=Striga asiatica OX=4170 GN=STAS_00754 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-15
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           L+    S+ ++E H++LY+EAVV V D  V V NAS    P +L  +++D EAV VVS +
Sbjct: 18  LEFVSVSTGEKEGHIALYDEAVVTVPDLAVGVANASWGPFPCELPPVASDFEAVAVVSSL 77

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDLSK 101
             V H++EK H+N CH+QLKG KV+ EIL++T+E L K
Sbjct: 78  RLVSHKTEKGHVNGCHSQLKGLKVEAEILSETMEYLIK 115

[Close]
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match: A0A7J6HPJ6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_028973 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-12
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQLFP S R+ E H+SL NE +  V++F V VPNAS   LPY L  +ST  + V +   +
Sbjct: 139 LQLFPVSPREGESHISLDNETIKTVTNFSVTVPNASWNPLPYHLPPMSTHFKTVVITLCL 198

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDL 99
             + H+ ++ +++   T+L+ FK++T+ILAKT E+L
Sbjct: 199 NIITHKPKESYVDGSCTELESFKMQTKILAKTAENL 234

[Close]
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match: A0A7J6HG47 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023204 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-12
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQLFP S R+ E H+SL NE +  V++F V VPNAS   LPY L  +ST  + V +   +
Sbjct: 139 LQLFPVSPREGESHISLDNETIKTVTNFSVTVPNASWNPLPYHLPPMSTHFKTVVITLCL 198

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDL 99
             + H+ ++ +++   T+L+ FK++T+ILAKT E+L
Sbjct: 199 NIITHKPKESYVDGSCTELESFKMQTKILAKTAENL 234

[Close]
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match: A0A5A7QN03 (Pentatricopeptide repeat-containing protein OS=Striga asiatica OX=4170 GN=STAS_23763 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           L+L    +R++E H+ LY+E++VA++D  V VP  S  A PY+LS +  + +AV VV+ +
Sbjct: 656 LELLSVPTREKEGHIPLYDESIVAITDLTVTVPYTSWGAFPYKLSPVCANFQAVCVVTRL 715

Query: 63  CFVPHESEKCHINWCHT 80
            F+ HESEK HIN  H+
Sbjct: 716 VFISHESEKGHINGSHS 732

[Close]
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match: A0A426YSL6 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00031614 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.3e-08
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQ FP ++ +EE HV LY+E V+ V DF V V +A R A PYQL ++  DL++V  V   
Sbjct: 29  LQSFPVTTGEEERHVPLYDEPVMTVPDFAVTVTDAPRCAFPYQLPSVGADLKSVAKVPCF 88

Query: 63  CFVPHESEKCHINWCH 79
             V HE++K H++  H
Sbjct: 89  ILVTHETKKRHVHRRH 104

[Close]
BLAST of Lsi09G018120 vs. NCBI nr
Match: GER25179.1 (coiled-coil domain-containing protein 92 [Striga asiatica])

HSP 1 Score: 91.7 bits (226), Expect = 7.1e-15
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           L+    S+ ++E H++LY+EAVV V D  V V NAS    P +L  +++D EAV VVS +
Sbjct: 18  LEFVSVSTGEKEGHIALYDEAVVTVPDLAVGVANASWGPFPCELPPVASDFEAVAVVSSL 77

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDLSK 101
             V H++EK H+N CH+QLKG KV+ EIL++T+E L K
Sbjct: 78  RLVSHKTEKGHVNGCHSQLKGLKVEAEILSETMEYLIK 115

[Close]
BLAST of Lsi09G018120 vs. NCBI nr
Match: KAF4393400.1 (hypothetical protein F8388_023204 [Cannabis sativa])

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-12
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQLFP S R+ E H+SL NE +  V++F V VPNAS   LPY L  +ST  + V +   +
Sbjct: 139 LQLFPVSPREGESHISLDNETIKTVTNFSVTVPNASWNPLPYHLPPMSTHFKTVVITLCL 198

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDL 99
             + H+ ++ +++   T+L+ FK++T+ILAKT E+L
Sbjct: 199 NIITHKPKESYVDGSCTELESFKMQTKILAKTAENL 234

[Close]
BLAST of Lsi09G018120 vs. NCBI nr
Match: KAF4396659.1 (hypothetical protein G4B88_028973 [Cannabis sativa])

HSP 1 Score: 82.0 bits (201), Expect = 5.7e-12
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQLFP S R+ E H+SL NE +  V++F V VPNAS   LPY L  +ST  + V +   +
Sbjct: 139 LQLFPVSPREGESHISLDNETIKTVTNFSVTVPNASWNPLPYHLPPMSTHFKTVVITLCL 198

Query: 63  CFVPHESEKCHINWCHTQLKGFKVKTEILAKTVEDL 99
             + H+ ++ +++   T+L+ FK++T+ILAKT E+L
Sbjct: 199 NIITHKPKESYVDGSCTELESFKMQTKILAKTAENL 234

[Close]
BLAST of Lsi09G018120 vs. NCBI nr
Match: GER46715.1 (pentatricopeptide repeat-containing protein [Striga asiatica])

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-09
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           L+L    +R++E H+ LY+E++VA++D  V VP  S  A PY+LS +  + +AV VV+ +
Sbjct: 656 LELLSVPTREKEGHIPLYDESIVAITDLTVTVPYTSWGAFPYKLSPVCANFQAVCVVTRL 715

Query: 63  CFVPHESEKCHINWCHT 80
            F+ HESEK HIN  H+
Sbjct: 716 VFISHESEKGHINGSHS 732

[Close]
BLAST of Lsi09G018120 vs. NCBI nr
Match: RRT54714.1 (hypothetical protein B296_00031614 [Ensete ventricosum])

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-07
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0 

Query: 3   LQLFPFSSRKEECHVSLYNEAVVAVSDFLVIVPNASRVALPYQLSAISTDLEAVTVVSGI 62
           LQ FP ++ +EE HV LY+E V+ V DF V V +A R A PYQL ++  DL++V  V   
Sbjct: 29  LQSFPVTTGEEERHVPLYDEPVMTVPDFAVTVTDAPRCAFPYQLPSVGADLKSVAKVPCF 88

Query: 63  CFVPHESEKCHINWCH 79
             V HE++K H++  H
Sbjct: 89  ILVTHETKKRHVHRRH 104

The following BLAST results are available for this feature:
BLAST of Lsi09G018120 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G018120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7NXG43.5e-1547.96Coiled-coil domain-containing protein 92 OS=Striga asiatica OX=4170 GN=STAS_0075... [more]
A0A7J6HPJ62.7e-1242.71Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_028973 PE=4 SV=1[more]
A0A7J6HG472.7e-1242.71Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023204 PE=4 SV=1[more]
A0A5A7QN031.7e-0944.16Pentatricopeptide repeat-containing protein OS=Striga asiatica OX=4170 GN=STAS_2... [more]
A0A426YSL65.3e-0844.74Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00031614 PE=4 SV=1[more]
BLAST of Lsi09G018120 vs. NCBI nr
Match NameE-valueIdentityDescription
GER25179.17.1e-1547.96coiled-coil domain-containing protein 92 [Striga asiatica][more]
KAF4393400.15.7e-1242.71hypothetical protein F8388_023204 [Cannabis sativa][more]
KAF4396659.15.7e-1242.71hypothetical protein G4B88_028973 [Cannabis sativa][more]
GER46715.13.4e-0944.16pentatricopeptide repeat-containing protein [Striga asiatica][more]
RRT54714.11.1e-0744.74hypothetical protein B296_00031614 [Ensete ventricosum][more]
BLAST of Lsi09G018120 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G018120.1Lsi09G018120.1mRNA