Lsi09G017620 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G017620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Tify domain-containing protein
Location	chr09: 26350855 .. 26353267 (-)
RNA-Seq Expression	Lsi09G017620
Synteny	Lsi09G017620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGGGCTACAGTCGAGCTTGATTTCTTCGGCCTTGAGAAGGAGGCTTCCTCCAAGTCTCAGTTTCACACTCTTCTTCACCGCAAGAGAAGCTTTCGAGGTATCTCTTCCTCTTCTCACTCTCATCTCTATCATTATCTTTTTTTCTTTTTTCCTTCCTTTTTCATCTTCTTATTAATTCTCTTTTTCTCTCTTTCCAGGCATTCACAGCGCCATTTCTAAGATTAACCCCGAGCTACTCAAATCTGTCATCGGCTCTGCCTCCATTTCTCTGCCTCCCAGTCCCAAGGCCGCTAAACAAAATCTCCTCTCGCCTTTGCCTCTTTATACGCCTATCTTCAGGCAATAATATTACAGAATTAATTAATTAATTAATTCAACTCCTATCTAACCGATTGTCTTCGTAGTTCCGTTTCGAATTTCCTCGGAATTCATCGTTTTCGCTTCTGTTTCTGTTTTTCAGGCCGACTACTCCTGAATCGCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGTTTGTTTCAACTCCGGACTTTTCTTGTTACGCACACGACTTTTTCCATCAGTTTTTGTTTTTTTTTGTTTTTTTCTGTAACAGATTTTGTTTTTGTGAATTGCTTTTCGATTAATTAATCAACCGCCTTCTTCTTTTGTGGTGTGGAAAATTCGTTTTAGGCTGAGAGCATTCTGAAACTTGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATTCCATCCACCGACCACCAGCAACAGTTGCTTGAATCTCTTAACGGAGGTGATTAAACCTCCGCCGACCTGCACTGAACTGATTTTATTTAAAAACAATATTTATATTTATTAATATTTCCTTTTACTGTATTCATATTTTATCTGAAATATCTGCTAATTTGTTATGTTTTCTCGGCAGATCTTCCAATTGCAAGGAAGAAATCGCTTCAAAGATTCTTGGAGAAGCGTAAGGAGAGGTAACGATTCATATTCCCTGAAATTTAAATTCATATTCCAATTTATTTATTTATCCGTTTTTTTTTGTACCTTTGAAATTTCGAAAAGCTTTTCCGTTTGTGTATTCTTATTCTTTGGTAGCTTAGGCCGCTATATTGAAAATGACGATGGCCGATGGGTGGATGCTTTCGATTTGAAATAATTATAAAATTTTCTCTCCAAAAAATAATAATAATAATAATAATAGTAAAAGAAAAGAAAAAGGATTGTTGTTATTGTATTGATTTGCGCCTATATTTGTGCAACTATCCCATGGTTGAAACTTTCTTTTATTTTTCTTGAGCAATATTTTTTACCTTTTTAGTGGGATTTACCAAGGATTGTCTCATAGGGAAATTCCATTCATGACTTTTGAGTGAATAATGACATAAAATTCATTAAAATTTGAAGATTGAATTTTGACATTTCAACAGGTTAGACTTAGTTTGGTTGGCAATTAAATTTTTAAAATTAAAATATGTATTATAAATTATAAATTATATAATATTACAAAAAATATATAATTTTTTATCATAAAATATGATTTATAAATATAGTATAAAACACATTTTAAATAATTGTTTAACTTGAAATTCAATTTCTGAATTTACTATCAAATACATATATAAAAATATAAAATATAACTGTGTTTTCATTAAATCCCTCGTACCAAACCGGCCTTTAATGTCTTCTCATTTTGTTCTTTTTTTTCTTCTTTCTATTCCTGACAACAAGTAATTTATAGTTTTTTAATATCCAATTTATCCTAAAGATGTTCTTATAGTTAGTTTATGATTTGACTTCTTCCGAAAAAAAAAGTTTCCACGGCTTAAAGAAGAATAACATTGTATGGAGATGGAAATTATTATATTATTATTTTATCAAAAATTAACTTCTAAACGACAAGAAGTAAATTTATGCATTGAAAATTAGGGGACCAATAAGAAACATTGTATTTTACTTTATTTTTTAATTTATAAAAATTTAATATTGAATTAAAACCCTACTTTTTATAGAAAATATTAAAATGTTGAAATAATACTGAAATAAGGTGTATGTATTATGGAAGAAGATAATGTGGAGGATAGAAAAAATAAATAGTGGCAAAAGTTAGGCGTGTTTGTAATATTCTTATTTTTATTTATCATTTTTTCAGTTTTCTTTTCTTTAAATTGATACAATATTTTCCTTTTGAAAATTGAAAATTCAGTTAAGCATTTAAAAAACGTTTGGAAATAAAGTAATTTAAGAGAAGAAATAAATAGTCACAAGAGAAGTTCAAATTTTGAAAAGAATAGAAAAGACTTTCTAGGCGAGTGGGTGGGTCGGTGGAGTTTAGGAGGGTCAGGAAAGAAAGCTTCCCCTTTTTAACATGCG

mRNA sequence

ATGGCTAGGGCTACAGTCGAGCTTGATTTCTTCGGCCTTGAGAAGGAGGCTTCCTCCAAGCCGACTACTCCTGAATCGCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCTGAGAGCATTCTGAAACTTGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATTCCATCCACCGACCACCAGCAACAGTTGCTTGAATCTCTTAACGGAGATCTTCCAATTGCAAGGAAGAAATCGCTTCAAAGATTCTTGGAGAAGCGTAAGGAGAGGTAACGATTCATATTCCCTGAAATTTAAATTCATATTCCAATTTATTTATTTATCCGTTTTTTTTTGTACCTTTGAAATTTCGAAAAGCTTTTCCGTTTGTGTATTCTTATTCTTTGGTAGCTTAGGCCGCTATATTGAAAATGACGATGGCCGATGGGTGGATGCTTTCGATTTGAAATAATTATAAAATTTTCTCTCCAAAAAATAATAATAATAATAATAATAGTAAAAGAAAAGAAAAAGGATTGTTGTTATTGTATTGATTTGCGCCTATATTTGTGCAACTATCCCATGGTTGAAACTTTCTTTTATTTTTCTTGAGCAATATTTTTTACCTTTTTAGTGGGATTTACCAAGGATTGTCTCATAGGGAAATTCCATTCATGACTTTTGAGTGAATAATGACATAAAATTCATTAAAATTTGAAGATTGAATTTTGACATTTCAACAGGTTAGACTTAGTTTGGTTGGCAATTAAATTTTTAAAATTAAAATATGTATTATAAATTATAAATTATATAATATTACAAAAAATATATAATTTTTTATCATAAAATATGATTTATAAATATAGTATAAAACACATTTTAAATAATTGTTTAACTTGAAATTCAATTTCTGAATTTACTATCAAATACATATATAAAAATATAAAATATAACTGTGTTTTCATTAAATCCCTCGTACCAAACCGGCCTTTAATGTCTTCTCATTTTGTTCTTTTTTTTCTTCTTTCTATTCCTGACAACAAGTAATTTATAGTTTTTTAATATCCAATTTATCCTAAAGATGTTCTTATAGTTAGTTTATGATTTGACTTCTTCCGAAAAAAAAAGTTTCCACGGCTTAAAGAAGAATAACATTGTATGGAGATGGAAATTATTATATTATTATTTTATCAAAAATTAACTTCTAAACGACAAGAAGTAAATTTATGCATTGAAAATTAGGGGACCAATAAGAAACATTGTATTTTACTTTATTTTTTAATTTATAAAAATTTAATATTGAATTAAAACCCTACTTTTTATAGAAAATATTAAAATGTTGAAATAATACTGAAATAAGGTGTATGTATTATGGAAGAAGATAATGTGGAGGATAGAAAAAATAAATAGTGGCAAAAGTTAGGCGTGTTTGTAATATTCTTATTTTTATTTATCATTTTTTCAGTTTTCTTTTCTTTAAATTGATACAATATTTTCCTTTTGAAAATTGAAAATTCAGTTAAGCATTTAAAAAACGTTTGGAAATAAAGTAATTTAAGAGAAGAAATAAATAGTCACAAGAGAAGTTCAAATTTTGAAAAGAATAGAAAAGACTTTCTAGGCGAGTGGGTGGGTCGGTGGAGTTTAGGAGGGTCAGGAAAGAAAGCTTCCCCTTTTTAACATGCG

Coding sequence (CDS)

ATGGCTAGGGCTACAGTCGAGCTTGATTTCTTCGGCCTTGAGAAGGAGGCTTCCTCCAAGCCGACTACTCCTGAATCGCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCTGAGAGCATTCTGAAACTTGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATTCCATCCACCGACCACCAGCAACAGTTGCTTGAATCTCTTAACGGAGATCTTCCAATTGCAAGGAAGAAATCGCTTCAAAGATTCTTGGAGAAGCGTAAGGAGAGGTAA

Protein sequence

MARATVELDFFGLEKEASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER

Homology

[Close]

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot
Match: Q93ZM9 (Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-14
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 17  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTV 76
           AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V
Sbjct: 89  ASLARSSTELVSGTVPMTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSV 148

Query: 77  AIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
            +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Sbjct: 149 ILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185

[Close]

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot
Match: A2XSX6 (Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.0e-09
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 24  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQ 83
           P +    +PMT+FYNG+VAVFDV  DKAE+I+++      A+G A  N  V   + +   
Sbjct: 78  PGAAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKE--- 137

Query: 84  QLLESLNGDLPIARKKSLQRFLEKRKER 107
                     P+ R KSLQRFL KRKER
Sbjct: 138 ----------PLTRTKSLQRFLSKRKER 152

[Close]

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot
Match: Q7XV97 (Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.0e-09
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 24  PESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV-----AEGKAEANPTVAIPSTDHQQ 83
           P +    +PMT+FYNG+VAVFDV  DKAE+I+++      A+G A  N  V   + +   
Sbjct: 78  PGAAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKE--- 137

Query: 84  QLLESLNGDLPIARKKSLQRFLEKRKER 107
                     P+ R KSLQRFL KRKER
Sbjct: 138 ----------PLTRTKSLQRFLSKRKER 152

[Close]

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot
Match: A2XD79 (Protein TIFY 11c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11C PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 3   RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVA 62
           R T+EL      ++A +   T E  + T  + +TIFY G+V VF D P +KA  ++KL  
Sbjct: 72  RKTMEL----FPQQAGTLKDTQERKEITEKAQLTIFYGGSVVVFDDFPAEKAGELMKLAG 131

Query: 63  EGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
              + A   V+       Q  L     D+PIARK SLQRFLEKRK R
Sbjct: 132 SRDSTAAAAVSDAGAAAGQPCLP----DMPIARKVSLQRFLEKRKNR 170

[Close]

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot
Match: Q8GRS2 (Protein TIFY 11c OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11C PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 3   RATVELDFFGLEKEASSKPTTPESLQHT--SPMTIFYNGTVAVF-DVPRDKAESILKLVA 62
           R T+EL      ++A +   T E  + T  + +TIFY G+V VF D P +KA  ++KL  
Sbjct: 72  RKTMEL----FPQQAGTLKDTQERKEITEKAQLTIFYGGSVVVFDDFPAEKAGELMKLAG 131

Query: 63  EGKAEANPTVAIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
              + A   V+       Q  L     D+PIARK SLQRFLEKRK R
Sbjct: 132 SRDSTAAAAVSDAGAAAGQPCLP----DMPIARKVSLQRFLEKRKNR 170

[Close]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL
Match: A0A6J1GMQ1 (protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 100/167 (59.88%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------P 60
           MARATVELDFFGLEK+ASS+                                       P
Sbjct: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60

Query: 61  TTP----------------------ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 107
            TP                      ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA
Sbjct: 61  PTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 120

[Close]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL
Match: A0A5A7TF20 (Protein TIFY 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001240 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.6e-36
Identity = 99/170 (58.24%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASS----------------------------------------- 60
           MARATVELDFFGLEKEASS                                         
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHSAISKIDPQLLKSVIGSASSISQ 60

Query: 61  -----------------------KPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILK 107
                                  KPT  E LQHTS MTIFYNGTVAVFDVPRDKAE+ILK
Sbjct: 61  PPTPKAAANHNVLSPLPLYTPIFKPTGSELLQHTSQMTIFYNGTVAVFDVPRDKAENILK 120

[Close]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL
Match: A0A0A0K9H7 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091930 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.6e-36
Identity = 98/169 (57.99%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------- 60
           MARATVELDFFGLEKEASSK                                        
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHNAISKIDPQLLKSVIGSASISLP 60

Query: 61  -----------------------PTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKL 107
                                  PT  ESLQHTS MTIFYNGTVAVFDVPRDKAE+ILKL
Sbjct: 61  PTPEAAANHNVLSPLPLYTPLYRPTASESLQHTSQMTIFYNGTVAVFDVPRDKAENILKL 120

[Close]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL
Match: A0A1S3CAS3 (protein TIFY 9 OS=Cucumis melo OX=3656 GN=LOC103498883 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.6e-36
Identity = 99/170 (58.24%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASS----------------------------------------- 60
           MARATVELDFFGLEKEASS                                         
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHSAISKIDPQLLKSVIGSASSISQ 60

Query: 61  -----------------------KPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILK 107
                                  KPT  E LQHTS MTIFYNGTVAVFDVPRDKAE+ILK
Sbjct: 61  PPTPKAAANHNVLSPLPLYTPIFKPTGSELLQHTSQMTIFYNGTVAVFDVPRDKAENILK 120

[Close]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL
Match: A0A6J1JVY1 (protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.7e-36
Identity = 99/167 (59.28%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------P 60
           MARATVELDFFGLEK+ASS+                                       P
Sbjct: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60

Query: 61  TTP----------------------ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 107
            TP                      ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA
Sbjct: 61  PTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 120

[Close]

BLAST of Lsi09G017620 vs. NCBI nr
Match: XP_038906955.1 (protein TIFY 9 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37
Identity = 99/168 (58.93%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------- 60
           MARATVELDFFGLEK+ SSK                                        
Sbjct: 1   MARATVELDFFGLEKDTSSKSQFHTLHRKRSFRGIHSAISKINPELLKSVIGSASISLPP 60

Query: 61  ----------------------PTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLV 107
                                 PT+ ESLQHTSPMTIFYNGTVAVFDVPRDKAE+ILKLV
Sbjct: 61  SPKAAANHNILSPLPLYTPLFRPTSSESLQHTSPMTIFYNGTVAVFDVPRDKAENILKLV 120

[Close]

BLAST of Lsi09G017620 vs. NCBI nr
Match: XP_022953183.1 (protein TIFY 9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 3.3e-36
Identity = 100/167 (59.88%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------P 60
           MARATVELDFFGLEK+ASS+                                       P
Sbjct: 1   MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALP 60

Query: 61  TTP----------------------ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 107
            TP                      ESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA
Sbjct: 61  PTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVA 120

[Close]

BLAST of Lsi09G017620 vs. NCBI nr
Match: KAA0039849.1 (protein TIFY 9 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 99/170 (58.24%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASS----------------------------------------- 60
           MARATVELDFFGLEKEASS                                         
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHSAISKIDPQLLKSVIGSASSISQ 60

Query: 61  -----------------------KPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILK 107
                                  KPT  E LQHTS MTIFYNGTVAVFDVPRDKAE+ILK
Sbjct: 61  PPTPKAAANHNVLSPLPLYTPIFKPTGSELLQHTSQMTIFYNGTVAVFDVPRDKAENILK 120

[Close]

BLAST of Lsi09G017620 vs. NCBI nr
Match: XP_031742393.1 (protein TIFY 9 [Cucumis sativus] >XP_031742394.1 protein TIFY 9 [Cucumis sativus] >KGN46420.1 hypothetical protein Csa_004891 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 98/169 (57.99%), Postives = 100/169 (59.17%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASSK---------------------------------------- 60
           MARATVELDFFGLEKEASSK                                        
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHNAISKIDPQLLKSVIGSASISLP 60

Query: 61  -----------------------PTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKL 107
                                  PT  ESLQHTS MTIFYNGTVAVFDVPRDKAE+ILKL
Sbjct: 61  PTPEAAANHNVLSPLPLYTPLYRPTASESLQHTSQMTIFYNGTVAVFDVPRDKAENILKL 120

[Close]

BLAST of Lsi09G017620 vs. NCBI nr
Match: XP_008459903.1 (PREDICTED: protein TIFY 9 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 99/170 (58.24%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MARATVELDFFGLEKEASS----------------------------------------- 60
           MARATVELDFFGLEKEASS                                         
Sbjct: 1   MARATVELDFFGLEKEASSKSQFHSLLHRKRSFRGIHSAISKIDPQLLKSVIGSASSISQ 60

Query: 61  -----------------------KPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILK 107
                                  KPT  E LQHTS MTIFYNGTVAVFDVPRDKAE+ILK
Sbjct: 61  PPTPKAAANHNVLSPLPLYTPIFKPTGSELLQHTSQMTIFYNGTVAVFDVPRDKAENILK 120

[Close]

BLAST of Lsi09G017620 vs. TAIR 10
Match: AT5G13220.2 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 17  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTV 76
           AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V
Sbjct: 89  ASLARSSTELVSGTVPMTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSV 148

Query: 77  AIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
            +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Sbjct: 149 ILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185

[Close]

BLAST of Lsi09G017620 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 17  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTV 76
           AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V
Sbjct: 89  ASLARSSTELVSGTVPMTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSV 148

Query: 77  AIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
            +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Sbjct: 149 ILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185

[Close]

BLAST of Lsi09G017620 vs. TAIR 10
Match: AT5G13220.3 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 17  ASSKPTTPESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKA-------EANPTV 76
           AS   ++ E +  T PMTIFYNG+V+VF V R+KA  I+K+  E  +       E + +V
Sbjct: 89  ASLARSSTELVSGTVPMTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSV 148

Query: 77  AIPSTDHQQQLLESLNGDLPIARKKSLQRFLEKRKER 107
            +P+T   +   ++L GDLPIAR+KSLQRFLEKRKER
Sbjct: 149 ILPTTLRPKLFGQNLEGDLPIARRKSLQRFLEKRKER 185

[Close]

BLAST of Lsi09G017620 vs. TAIR 10
Match: AT3G43440.1 (jasmonate-zim-domain protein 11 )

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 19  SKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPTVAIPSTDHQ 78
           ++ T P++   ++ +TI + G+  VF+ VP  K + I+++   GK   N T   P+ +  
Sbjct: 35  ARSTEPDA---STQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGKQTKNVTGINPALN-- 94

Query: 79  QQLLESLNGDLPIARKKSLQRFLEKRKER 107
           + L  S   DLPIAR++SLQRFLEKR++R
Sbjct: 95  RALSFSTVADLPIARRRSLQRFLEKRRDR 118

[Close]

BLAST of Lsi09G017620 vs. TAIR 10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12 )

HSP 1 Score: 50.8 bits (120), Expect = 7.7e-07
Identity = 37/114 (32.46%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 18  SSKPTTPESLQHTSPMTIFYNGTVAVFD-VPRDKAESILKLVAEGKAEANPT----VAIP 77
           +++PT P      + +TIF+ G+V VFD +P +K + IL++ A+     N T    V+ P
Sbjct: 48  TAEPTVP-----PNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPVSSP 107

Query: 78  STDHQQQLLESLN--------------------GDLPIARKKSLQRFLEKRKER 107
           + +       + N                     DLPIAR+ SLQRFLEKR++R
Sbjct: 108 ALNRAPSFSSTSNVASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDR 156

The following BLAST results are available for this feature:

BLAST of Lsi09G017620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZM9	1.7e-14	48.45	Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1	[more]
A2XSX6	8.0e-09	43.18	Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1	[more]
Q7XV97	8.0e-09	43.18	Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1	[more]
A2XD79	7.5e-07	40.19	Protein TIFY 11c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11C PE=3 SV=1	[more]
Q8GRS2	7.5e-07	40.19	Protein TIFY 11c OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11C PE=1 SV=1	[more]

BLAST of Lsi09G017620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMQ1	1.6e-36	59.88	protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=...	[more]
A0A5A7TF20	3.6e-36	58.24	Protein TIFY 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00124...	[more]
A0A0A0K9H7	3.6e-36	57.99	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091930 PE=3 S...	[more]
A0A1S3CAS3	3.6e-36	58.24	protein TIFY 9 OS=Cucumis melo OX=3656 GN=LOC103498883 PE=3 SV=1	[more]
A0A6J1JVY1	4.7e-36	59.28	protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 ...	[more]

BLAST of Lsi09G017620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906955.1	5.1e-37	58.93	protein TIFY 9 [Benincasa hispida]	[more]
XP_022953183.1	3.3e-36	59.88	protein TIFY 9-like isoform X2 [Cucurbita moschata]	[more]
KAA0039849.1	7.4e-36	58.24	protein TIFY 9 [Cucumis melo var. makuwa]	[more]
XP_031742393.1	7.4e-36	57.99	protein TIFY 9 [Cucumis sativus] >XP_031742394.1 protein TIFY 9 [Cucumis sativus...	[more]
XP_008459903.1	7.4e-36	58.24	PREDICTED: protein TIFY 9 [Cucumis melo]	[more]

BLAST of Lsi09G017620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13220.2	1.2e-15	48.45	jasmonate-zim-domain protein 10	[more]
AT5G13220.1	1.2e-15	48.45	jasmonate-zim-domain protein 10	[more]
AT5G13220.3	1.2e-15	48.45	jasmonate-zim-domain protein 10	[more]
AT3G43440.1	1.2e-07	38.20	jasmonate-zim-domain protein 11	[more]
AT5G20900.1	7.7e-07	32.46	jasmonate-zim-domain protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 26..60 e-value: 2.4E-9 score: 47.0
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 30..58 e-value: 6.0E-13 score: 47.9
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 26..60 score: 12.461191
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	Jas_motif	coord: 89..106 e-value: 5.6E-10 score: 38.9
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 20..106
None	No IPR available	PANTHER	PTHR33077:SF5	PROTEIN TIFY 9	coord: 20..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G017620.1	Lsi09G017620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus