Lsi09G017550 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G017550
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFAD/NAD(P)-binding oxidoreductase family protein
Locationchr09: 26269014 .. 26278632 (-)
RNA-Seq ExpressionLsi09G017550
SyntenyLsi09G017550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTCCCACAACCATTTTGGAAGGGGTTTTTATGGGTCTTGATCTTTTGAAACTTGGTTTGAGGAAGAATATGGGTATTGGCCACTCGATATGGTTATTTATGGACCCTTGGTTTTCCTGTTCATCAACATTCAAAGTGTTGTCTCCTTGCAAAGGGGATCGGAATGTTAAGACTGTTGGGTTGGTTTTCTCTTTTGGACAGTGGAATGTGGGAAAATTAAATCAGGTGCTCGGGTCAGATGATGTTGAGGTAATTTCATCTATACCTATTAGTAGTTTATGAGCACATAACACTTGGACTTGACACTATGGTCACTTTTGGAGTTATACCGTGAAAAGTGGTTATCAGGTTATTTCCTCCCTTGAGCTGGGGTTTACATTAGCTAGTTTCAATCCTTGTGGGAAGTGGTGGAGTGGTCTATGAAAGGCTCAAATCCTGACAAAAGTTAAACATTTTGTGTGGAGGTGATTGTTTCTTTTCTTTTCTTTATTTGTCTGCCTTGACAAGCTAGTTTCAAAGGAAATATTAGCTCCATCCAATTTTTGTTCTTCTTATGAAGCATGTAAAAAAAAATGTTACTCATGCTTTATTTATTTTATAAGAGGGTTAGGCAGGTTTGACGGTTGCTTATTCCCAAGTTTTGGCAAGTTTGTCGTCTCGCCATGCACATCCAATAAATTTGGTTGGAAATGGTGAAGGTGTTATCAAAATCAGAGTCGTTCCAAGGGATGTACATTGGAGCGTGGGCATTATGGACTGATAGGAATAATTTAATCATGCATAAGTTCATCCTTGATGTTAGTACAAAATAAGACTGGATCTCTGATTATATTCAATATTTTATGCAAGACAATCTAAAGCATAATCTAGATTTTGTTGTTGCTCCTATGGTTCCTGTGGGTGAGGCACCTAGGTGGACTACGGTTGATGCATCCTGGGTTCTAACACTAGGTAGACTATGGTTGATGCATCCTAGGTTCTCAATGACACTATGTGTGGCATTGGGGCTTTCGTTAAAGATCTTAACGACAGTGTGGTTGCCGCTATGCAAGGTTCAAAACCAAGGCCCTCGTCTGCCCTCTCCGTGGAAGTTTATGTTGTTTTGGACGGGGTTCAGTTGGCATAGTGAATGGAGATCTAGAATTGTATCTTTTGTCCGACTCGCAACTGATGGTGCATATGCTGAATGGCCAGTTGAATGTATTCTCTAAAGTGGATGTGATTGTTAGAGATATCATTCCTCTTGTTCTGATTTTCATAGTTTATTGTTTTGTTATATTTCTATGGTGCATAATCATATCCCTATGCTCTAGCTACTAAAAGTTGATGAGATAATATGGTACTGTGGAATGATCCCTTTCCATCATAACTTAGGAGCTTGATAGTTAATGGAGGTCTTGATGTTGTAGCCGGTATGATTTGTTCTTAACCTTTGTTTATTGGGAGTTTTCTTCTCGTGTAAAAAAAAGTAGTTTATGAAAGATTAATAATGTTAACTATGTTTTGTTTTTTTTAGTACAAACATCTATAACTACTATGAAATATTTGAAAGTATGTGAATCAAAATATAGTAAGTAGGTAAGATAAAAAGAATAGCATTAAAAAAACAATTCTATTCTATTTAAACTACGATTCGATTGCCAATTTTAAATTAATTTAATTTACCAATTAGTATTCTTTTTGTCATGTTTTATCACTATTATTAAAATAAAATATAAGGATATTTTCGTACAATAACGAGTGTAGAGATTCTAACTAGAAACCTTTTGCTCGCTAACACATTTGATATGACAATTGAACTATGCCCACTTTGACAAAATATAAGGATTTAATCCCACATATTATAAGTACACACCTATGAAAGAAAAAAAGTTGTTTTCAAATACAGCAAAATGAGTTAAAATATTTACAAATATAACAAAATGTCAATATTTATCATTGTCTAATCAAGATGTTGCCTCTCTTAAAAAAAAAAAAAAGTTGGCAATCTAATCAAGATGTTGTAAGCCAAGTAAATATATAAATAGATGAATATTTGAGACTTGATGCATACAATAAATCAATTACATGGTTGATTATGACATAACATAATGACATATGTTGTTAGCTATTGAACTATAGTTAAATAGAGGCATTAACAAATTTACCCTATTCCATTGATAAAAAATAGTAAATAAAGTGTCAAAGTGGTCATAGTTCAATAGTAATTAATGTATACTCCTTTGCTTAAGGTTGAAGGTTCAAATTGTCATACCTCACCCGTTATACTAAAAAAAATAGTGAACAAAGTAATGACGATTGATGACAAAATGCACACAGAAATTGCCACATGAAAATTAAAGGAGTGATAATTAAACATGCTCTGAAAGACCTATCGAGGCGGGAGGGGTTGGCACAATGAATTTTTGTAGAACTAGATCTTGGAGAGTTATTAGTATGGATTTTTGTAGTTTATGGCTTGAATTTGTGTAACTTATGTTTGGAAATGAGGTACATATTAAGCACTTAATTTGACCTATTATTGATACCCTTTGTTGAGAGTAGTGATTTGATGGGAATGAGTGCTATAATTCAACAGTTTTTTTGGCAATACTCTTCCCTCAATCGAGACATTCCATAACCTTCGAGGATCCGTTGAGTTAGCTGAACTAATATATTTAAAAGAAAGTGTTTCTGTAGCAATAGAGACAAACATTTATCCAGTTCGAGTGGAAGTTAGCTTGCAAATATTGTAGAAGTTGTTAGCTGGTATTGATCGTGACAACAACAATATCAAACTCTTTATTGGTAGTCTTTAGAAACAACAACAACATAGATTCATTTGTGTATTTTTATATGTTCCAAATCAATGCAACAAAATGTCTCATGAACTAGCCATCCATGCTCGATTCGTGCACAGAGAAATCTAATAGGAAGAATACCATTGGTCACCAACGTAGCTATTACTGATTGTCCAAACTTTATTTTCATATAATTTCTACATTTTGTTTTTTTGTTTTATTTTATCTACTGTGTTAAAAAAGATTAAAAGTTCAGAAACATAATTAGATGTAAATTTAAAGTTTAGGGGCCTAAGACTTTAAACACTTTAGAGATTAAACTTATACTTTATCAAATATGCTCAAAATTAAACTTTCAATTTGTGAACAAAATTATAAGTAGGGTTAAATCTTATGAAAAGGTTTTTATAAAAGCTCTATCAAAAAAAAAAAAAAAAAAGTTTTAATAAAATCACGTTGCTGGTTAAGTTCAGTTGCAACCCCCAAGTGTAATTTAACCTATTTTTCATTATTGTTTCGTTTGAGAGAGCGGAGAGAAATTTGCAGATAAAGCTCGGCCACGCTCGGAATCAAGCAAGCGGGAGAGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTACTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACTCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGGTTCGCTCTCAATTTCAATTTCAATATCACTTTGCTATTTATGTCCGCCGTTAGCTTGTGTAGAAAAATCTCTGGAGATTCGTTTGGAAATAGCAAATACTCTATTATCCGACAATATCTTGCTCTGGGTTGGTTTTAGGAGTAGAACTTTGGGGGTTTAGATATAATTGTACGAAGAGTAGGAAAAAAAAAAGATGATGACACTGAATCATTCAATACAGTTAACGTCGAAGCAAATGAAGTAGATTTAGGAGACTCCTTAGCTTGGTTTTATATATGCGTTGGAATGACATTTTCTGTAAGCAGTGTAGAAAATATTGGAAACCATGTTACTGTTAACTAACAGTGAGACCAAGGATGTCCATTACGTTTGAGATATCTATTTGCCATTTTTGTGTAGTACTTTTGCATTTTGACATCATTTCCCATTGTTTACTTGGGATTTTTGTGCAGTACTAGGCATTAGTGAGAAAATACCGAGAAACCTTGAAACACGTGGATGATACCCCAACAATCCGCAATCGGAGAACGGTGAATGTGATATGGTCTGATCTTAATAAGGATTTTCTTACAAAGAATATACCGACGTGGAGTCAAAGAACATTTGGGGTTCAGAACATTTGGGGTTCTTTTTCTGCAATCTATTTGGGGATTGTAACCCTTCCAATGCTAGGATCCAGAGAATGAATTTTACTTTCTGTGTAACTATGTCTTTCTAGATACATTATATAAGAACCTTGTCCAGAAGATTCTATAATAGTAGCCATAAGAACGAGGTTCAGACATAGATATGTGTATAGGATCTTCCATCTTCTAGTATTAGGTTGCTGGTTTGTAGAAAGATCAAAGAGGTTATGTGAAAGATGTATGGATTGTTGTCTCCAAATGTGAGAGGGGCTCTCCTAAGCTCTAAATGTCAGGCTTCACGATTTTCTATCACCTGTCTTTGAGGATTGAGATTGTTTTGGAAAACAAACTTCAGGTGGATGGCTTCAAATCCAAGTACCTTTTGAGAAAGAAATTAGTTTTCTTTACCTATCTTGGAAGAATATTGATTCTCCATAACCTTTTAGCTTCTAGATGGAGTTTCTTAGTTAAGGAATTTTGCGATTATTATTCTTTTTGATTCATGCTATAGGGACCATTTTGTCACCTCCTTGGATAGAGTGAGTTGGAGAATATGTTATCTTTCCTTGGAGTCTTCCTTTTATGCACATGTTTGTGTTTTGGTGACACATCTCATCTGAAAAAGAAGAATGTTTTAATATGAAACATTGCCTTTCTAGTTCATATTGATGATTGACTTCATTCAAGTTGTAGAACATTTCAAGTTAGATGAACATTGAGGCTTGAATGGAAACCTTTATGGACTGCTCAAAATTAGATAGACACATAGAAAGAAAATCAACCAAGGAATATAAATAATAATGTTTCTGTTAGAGGGACTGCGGGGTAAGGACCATTGGACAAAAGTCCTTCAAACCTTACATCTGCAGCTGCATTGAGTGACAACGAACCATGGACTTTTGCTATTGTACCATTCAAACTTTGCATTCATAAAAGGAACCAATGACTCAAATTACTCATGGATATGAGAAAAGGAAAAAAAAAAAAAAAGAAAAGAAGAAAAAAAAAAAGAAAAGAAGAAAAAAAAAAAGAAAAGAAGAAAAAAAAAAAGAAAAGAAGAAAAGAAAAAAGAAATAAAGGGGCTTCCTTTGAAATGGAATCCTAATCCTAGTGAGGGTTTTTTCTTGTAAGTCCTTTCGGCTGTTGCTGGATCCCTTTCTTGCTAGTGAGTCGGTCTTTGATATGCTCTAGAGGATTAATATCCCTTAGAAAGTTAAATTCTTTACTTGGCAAGTCTTACTCGGCCGTGTGAACACTTTGGATAGGCTTTAGAGAAAGATGCCTATGCTAATGAGCCCCTTTTGTTGTATTCTTTGTTGGAAGGCAGAGGAAGACTTGGATCACCTTCTCTGAAGTTGTCAGTTTGTGAGATCTGTGTGAAATTGCTTCTTTCAGGAGTTTGATCTTGAGTTAGCACATTAAGAAATGTTTGCGGGACGATTGGGAAGTTCCTTCTCCATCCGCCTTTATGAAAGAAAGGTTGCTTCTTATGGTCTGCTGGGGTGTGTGCTTTATTGTGAAATATTTAAGGGGAGAGAAACAACAAAGTGTTTAGAGGTGTGAAGAGGTATCCTTGTAATGTTTGGTCTTTGGTGAGGTTCTATGTTTCTCTTTAGACTTCGGTTTCTTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATATATATATATAAAAGATTTACTAGGAGACCACTTCTCTCTTCTAGCCGAGCATCACTTTAAATGTGGAAAAAAAAAATTCTCTGGAGCAACTATATTTTTAAAGCTTTCTTTTGGGCCATTTGGGGTGAGCGAAACACACGTTCTCCAAGACAAAGAAAGATGCTACATTAGTTTATTTATTTATTGTCATTAGTCTTTATGGCTATGACTTGCTGTAATAATTACCCTTACTCTTAGTTCCAAAATTATGCTCTCTTTTCTCCCTACCATTAGAAATGTTTAAGCAATTCTTGGGGGTGCGAGTATTTGCCTTCTGTACTCCCATCCCATCTACGAAATTATAGTAATTTCTCTCTCAAAAGAAAAAAAGAGCTAGAAACTCATTCCTTTTGGAAGTATCGAGGCTCTTGTAGTTAGTTTGGAAAGATGCAAGATGTTTTCTTCCATAACGCTTCCATGATTGGAAACAACAATAAAATCGGATTTTGGGAATGCCTTCGTAAATTTTCTGCCCTCTCCAGACCTTACCTTTTATTTTTTTATTTTCTTATTTTTTAAATAGGCCAACCCATGATGGGACATTACCTTCTCTTTGATAACAACAACTGCATCATTAGCCCACACGTGGAGCACCTTCCACGAGGGATAGAACCTCAATCTTAGAAGAAATCTGGATGTCATAGGTGCATGAATGGATCTCTCTCACCAACACTGTAAAAGAAATATCTCAATAGCATGTTTTCTTCACTGGCCCCTATGCTTCAAATTTCTGTGTTCAGCACTTCAAAGTGGTCCACTCTTCTAAATGAATCCCAAAACAACCTTTCTCTTATCTTTTGAGGTTCTTCCCTTTAAAACGGAATGGAAGAATTTTCTCTGAGCAAGAATAATATTTAATTCTTAAGTTTTCGATTTTTTTTTTGAAAAAATCTTATTTTTGTAGTTGCCACTTGGGTTGGCTTCCCTAGAATGATCTCTCCCCTCTTTGTGTGCATAAATTTCATTTAATCATTGAAATTGTCTTTTATAAAAGAAAAGGAAAGAAAAGAAAATGATAGAAAAGAGTTGCTTTCCTGCTTTTGATGAATGGATTTCAAACTTCACAAGTTGTTTTCTTTACTTTGTTTTCTGAAAGTGGAATGTCTATTCAGTGAAATAAATTTTTTGAGAGTCAGCATAGATATTTACTATTTAGCTGTTAGAATTGCATGATTTACATCAAAGTAAGGGATAAGCTATACTATTCTACGAGTTTTGGCATAGTGACTACAAGGTTCAAGTAGTTACTTTTTATTTAATCGATTGATCCTGTTAAGAATATCAAATTTATATGCTAAAAAGGAAATTATGTTAGGTCTTGTTTATTATTCATGTGCGGATTCTCTCTTTCTAATAATATCGTGAAGGTATTTGTTTAGTTTTTTTATGGTGAAAGTGGCGGCTTTTGACTGTTTACTGTTGAGGGACTGAGTACAATTTTATTTTTAGTCGACCTGTATAAATTATGCTTCTCAAATACATCCATCTGACGATTGTTCATTCTAGAGCCAATGCATTTTCTCCCCCAAATTTTCTATCTTTTTATACTTCTGTATTTGTCCTATGGAAATGTACATCCTATGCCCTTTTGGTTGTTACCATGGAATTCTATTTTGAATTTCTGTTCTTGTTCTTGTTTTATATATAGTTATATAATGTTACATTACTAATTCGAGAAATATTTTTTTAATTGTTGATACGCGTTCTAAATTCGTATTATTACTTCTTTCCAGAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGTCAAGTTGGAAAAAATGAGTAAGAACTCCATAGGATCCAAAAGAGTTTGGCAACTTCGGCATTGCAGTGCCAATTTTTTTCCCCTTATCTGGGCCTTTTAGAAAGGAAGAGTAAACTTTAAGTAGACATGAGTGATCTCAAAAGTTTTCATCCTCATATGTAAGTGATGACTCATACACTAGTGTGGATTACTGCCTGGAGTTTCACATCATTTCTATTTGTTTTTGTTATTTGATGTAATGTGATTAGTTTTTCATGGTCCTGGCTGCCTCATGAATGGCTCGTCTTTCAGTAAAAATATTTGATATTTAGCTTTCTGAGCAAATTCACTATTGATATTCGAAGTTTAGGGCTGAAAATATCTGAACTAGAAAAGAAAGACAAGCCTTCCAAAAAAAGGTTCATCCTTCCTAGTGCTTGTGTAGTGTATTAACTGGTTACAACATTTAAAAACATGATATGGGTCTTGGGTAATCGAGTAGAATGCTAGGTAGGTTGATGGAAGATGGAACTATATCAACTTTTATTGGAATGCTTACTCCTTCAGGTTGGATTTATAGAAAATAAGAATATGATATATAAAGGTGTTATCCAAATTCTTATCGAGGTAAATAGGTCAGAAGAAAAGAAAAAGTCTAATGATTTAATCTAGTTGAAAAACTCAGTTATAATGTATCAAGTAGACTGATATGGACTTTGCATACAAATCTAATTTGTTTAGTAGTAATTTCTTCAGTTATCTCTATAACTCAAAGGTTTTTCGGGACTTTTTCCCTTGATGGTTAGTCTATTTGATCCAGACCTCAGTTCACTTGTTGCTGAGGTAAATGGAGCTAAAACAATTTCAGGACTAACTTGTTCGTACGGTTTGATTCTTAAAAGCTTAACTTGTATCATACGATAAGAGTAGTACTCAACTCCTAAATGGTAGATAGGGTATGTGGGCAAGGGTTTCACTCTTCATCCACTTGAGTATTAGGCTAAACCATCTAAAACTGCCAAGTCTTTTGAGGTTCATTTCTTTTGCAGGAATTGTTTTCAGTTTCACAACTGCTGGGCATGAAATGTAGCCAATTACAGGTACTTCCATGCTACCCAATTTTTCATCAAATTTGAATATTGCATTTCTTGAAAGTCTTTCCACTAAAGGTTTGAAATTTGGCTGTCTCTGAATGTCAGGCATTTACTAACCATTGAACTGGAGAAGTATGAGTAGGTTGATCATCAAACATTGACATGAAAGGAATCCTGATTGTTCCTCACTTTGCTTACTGGACCCCACCAACCAGAATTTTTTCTGGGGTGGATTTCATTTTGCATAAGATGATTTTTATCTTTAATTTTGCAGAGATCCAGGGATAGAAAAAGAAGAAAAAAAAGATTGGAGATAGATAGATGTCTTTGTTGCAGGGATTCAAAGCAACCTCTCTTATTTAATGTTTGTCCAAAACAAACAGCTTATAAGAGTAGTTGGGTGAAGAACTGGTCAACTTACATAATTGATGACAATTCCTTCTCTGATGGATAATTTCTATTCAAAATTTCTCAATTGCCCTTGCTTGATGGAGACCCCCCCTTATTGCCTTTTGATATGTTTCTAGGATTGGTAGGATTTTTCTTTAAATGTTATTGACCTTATCAGGTTGGCCTACTTAAGAAAATAAATTATGATAAAACAAAAAAA

mRNA sequence

TGGTTCCCACAACCATTTTGGAAGGGGTTTTTATGGGTCTTGATCTTTTGAAACTTGGTTTGAGGAAGAATATGGGTATTGGCCACTCGATATGGTTATTTATGGACCCTTGGTTTTCCTGTTCATCAACATTCAAAGTGTTGTCTCCTTGCAAAGGGGATCGGAATGTTAAGACTGTTGGGTTGGTTTTCTCTTTTGGACAGTGGAATGTGGGAAAATTAAATCAGGTGCTCGGGTCAGATGATGTTGAGGCAGGTTTGACGGTTGCTTATTCCCAAGTTTTGGCAAGTTTGTCGTCTCGCCATGCACATCCAATAAATTTGGTTGGAAATGGTGAAGGTGTTATCAAAATCAGAGTCGTTCCAAGGGATGTTCTCAATGACACTATGTGTGGCATTGGGGCTTTCGTTAAAGATCTTAACGACAGTGTGGTTGCCGCTATGCAAGGTTCAAAACCAAGGCCCTCGTCTGCCCTCTCCGTGGAAGTTTATGTTGTTTTGGACGGGAGAGCGGAGAGAAATTTGCAGATAAAGCTCGGCCACGCTCGGAATCAAGCAAGCGGGAGAGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTACTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACTCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGGCATTAGTGAGAAAATACCGAGAAACCTTGAAACACGTGGATGATACCCCAACAATCCGCAATCGGAGAACGGTGAATGTGATATGGTCTGATCTTAATAAGGATTTTCTTACAAAGAATATACCGACGTGGAGTCAAAGAACATTTGGGGTTCAGAACATTTGGGGCCAACCCATGATGGGACATTACCTTCTCTTTGATAACAACAACTGCATCATTAGCCCACACAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGTCAAGTTGGAAAAAATGATTATCTCTATAACTCAAAGGAATTGTTTTCAGTTTCACAACTGCTGGGCATGAAATGTAGCCAATTACAGGCATTTACTAACCATTGAACTGGAGAAGTATGAGTAGGTTGATCATCAAACATTGACATGAAAGGAATCCTGATTGTTCCTCACTTTGCTTACTGGACCCCACCAACCAGAATTTTTTCTGGGGTGGATTTCATTTTGCATAAGATGATTTTTATCTTTAATTTTGCAGAGATCCAGGGATAGAAAAAGAAGAAAAAAAAGATTGGAGATAGATAGATGTCTTTGTTGCAGGGATTCAAAGCAACCTCTCTTATTTAATGTTTGTCCAAAACAAACAGCTTATAAGAGTAGTTGGGTGAAGAACTGGTCAACTTACATAATTGATGACAATTCCTTCTCTGATGGATAATTTCTATTCAAAATTTCTCAATTGCCCTTGCTTGATGGAGACCCCCCCTTATTGCCTTTTGATATGTTTCTAGGATTGGTAGGATTTTTCTTTAAATGTTATTGACCTTATCAGGTTGGCCTACTTAAGAAAATAAATTATGATAAAACAAAAAAA

Coding sequence (CDS)

ATGGGTCTTGATCTTTTGAAACTTGGTTTGAGGAAGAATATGGGTATTGGCCACTCGATATGGTTATTTATGGACCCTTGGTTTTCCTGTTCATCAACATTCAAAGTGTTGTCTCCTTGCAAAGGGGATCGGAATGTTAAGACTGTTGGGTTGGTTTTCTCTTTTGGACAGTGGAATGTGGGAAAATTAAATCAGGTGCTCGGGTCAGATGATGTTGAGGCAGGTTTGACGGTTGCTTATTCCCAAGTTTTGGCAAGTTTGTCGTCTCGCCATGCACATCCAATAAATTTGGTTGGAAATGGTGAAGGTGTTATCAAAATCAGAGTCGTTCCAAGGGATGTTCTCAATGACACTATGTGTGGCATTGGGGCTTTCGTTAAAGATCTTAACGACAGTGTGGTTGCCGCTATGCAAGGTTCAAAACCAAGGCCCTCGTCTGCCCTCTCCGTGGAAGTTTATGTTGTTTTGGACGGGAGAGCGGAGAGAAATTTGCAGATAAAGCTCGGCCACGCTCGGAATCAAGCAAGCGGGAGAGGGAAGGAGATGGCGGGTGCATTTTGGGGGACACGGGTACTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAGCTCACCACAACTCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGTGTTTGGCAGGCATTAGTGAGAAAATACCGAGAAACCTTGAAACACGTGGATGATACCCCAACAATCCGCAATCGGAGAACGGTGAATGTGATATGGTCTGATCTTAATAAGGATTTTCTTACAAAGAATATACCGACGTGGAGTCAAAGAACATTTGGGGTTCAGAACATTTGGGGCCAACCCATGATGGGACATTACCTTCTCTTTGATAACAACAACTGCATCATTAGCCCACACAATGAGGCTGTTCTGAAGGCATGTTCTGAGCCACCTCCGCCTAAATCTTCAGGAGATAAAATTAGTCAAGTTGGAAAAAATGATTATCTCTATAACTCAAAGGAATTGTTTTCAGTTTCACAACTGCTGGGCATGAAATGTAGCCAATTACAGGCATTTACTAACCATTGA

Protein sequence

MGLDLLKLGLRKNMGIGHSIWLFMDPWFSCSSTFKVLSPCKGDRNVKTVGLVFSFGQWNVGKLNQVLGSDDVEAGLTVAYSQVLASLSSRHAHPINLVGNGEGVIKIRVVPRDVLNDTMCGIGAFVKDLNDSVVAAMQGSKPRPSSALSVEVYVVLDGRAERNLQIKLGHARNQASGRGKEMAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVDDTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIISPHNEAVLKACSEPPPPKSSGDKISQVGKNDYLYNSKELFSVSQLLGMKCSQLQAFTNH
Homology
[Close]
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match: A0A1S3CB86 (uncharacterized protein LOC103498876 OS=Cucumis melo OX=3656 GN=LOC103498876 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 70/150 (46.67%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGDKI QV KN+
Sbjct: 121 --NEAVLKACSEPPPPKSSGDKIGQVEKNE 74

[Close]
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match: A0A0A0KDH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092000 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 70/150 (46.67%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL RVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLHRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGD ISQV KN+
Sbjct: 121 --NEAVLKACSEPPPPKSSGDNISQVEKNE 74

[Close]
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match: A0A6J1H761 (uncharacterized protein LOC111461104 OS=Cucurbita moschata OX=3662 GN=LOC111461104 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-20
Identity = 70/150 (46.67%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGD ISQV K +
Sbjct: 121 --NEAVLKACSEPPPPKSSGDGISQVEKKE 74

[Close]
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match: A0A6J1KU88 (uncharacterized protein LOC111497673 OS=Cucurbita maxima OX=3661 GN=LOC111497673 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-19
Identity = 68/150 (45.33%), Postives = 70/150 (46.67%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSS D I+QV K +
Sbjct: 121 --NEAVLKACSEPPPPKSSRDGINQVEKKE 74

[Close]
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match: A0A6J1D5J5 (uncharacterized protein LOC111017505 OS=Momordica charantia OX=3673 GN=LOC111017505 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.7e-18
Identity = 68/154 (44.16%), Postives = 70/154 (45.45%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 78

Query: 302 PHNEAVLKACSEPPPPKSSG-----DKISQVGKN 331
             NEAVL+ACSEPPPPKSSG        SQVG+N
Sbjct: 121 --NEAVLRACSEPPPPKSSGGISKDSTSSQVGEN 78

[Close]
BLAST of Lsi09G017550 vs. NCBI nr
Match: KAG7014631.1 (hypothetical protein SDJN02_24810, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-30
Identity = 86/169 (50.89%), Postives = 91/169 (53.85%), Query Frame = 0 

Query: 163 NLQIKLGHARNQASGRGKEMAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL 222
           NL I+LGHARN+ SGRG++MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL
Sbjct: 6   NLGIQLGHARNRESGRGRKMAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRL 65

Query: 223 LRVWQALVRKYRETLKHVDDTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIW 282
           LRVWQ                                                       
Sbjct: 66  LRVWQ------------------------------------------------------- 98

Query: 283 GQPMMGHYLLFDNNNCIISPHNEAVLKACSEPPPPKSSGDKISQVGKND 332
                                NEAVLKACSEPPPPKSSGDKISQVGKN+
Sbjct: 126 ---------------------NEAVLKACSEPPPPKSSGDKISQVGKNE 98

[Close]
BLAST of Lsi09G017550 vs. NCBI nr
Match: KAG7025221.1 (hypothetical protein SDJN02_11716 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-23
Identity = 77/169 (45.56%), Postives = 92/169 (54.44%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ L           +
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQGL----------GE 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPT---WSQRTFGVQNIWGQPMMGHYLLFDNNNC 301
           +   IR+    +      NK +    +     +    F   +++      +  +  +   
Sbjct: 61  EPFDIRSSNLTSAAAFSDNKPWTLDTVTAEGWYHSEVFEGSHLYDISWRSYGRIVKDFCP 120

Query: 302 IISP----------------HNEAVLKACSEPPPPKSSGDKISQVGKND 332
           +  P                 NEAVLKACSEPPPPKSSGD ISQV K +
Sbjct: 121 VSLPIPCFSKIIVDQLKKELCNEAVLKACSEPPPPKSSGDGISQVEKKE 159

[Close]
BLAST of Lsi09G017550 vs. NCBI nr
Match: KAG6576111.1 (hypothetical protein SDJN03_26750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-22
Identity = 73/150 (48.67%), Postives = 74/150 (49.33%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGDKISQVGKN+
Sbjct: 121 --NEAVLKACSEPPPPKSSGDKISQVGKNE 74

[Close]
BLAST of Lsi09G017550 vs. NCBI nr
Match: XP_038875024.1 (uncharacterized protein LOC120067546 [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-21
Identity = 72/150 (48.00%), Postives = 73/150 (48.67%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGDKISQVG N+
Sbjct: 121 --NEAVLKACSEPPPPKSSGDKISQVGINE 74

[Close]
BLAST of Lsi09G017550 vs. NCBI nr
Match: KAG6592813.1 (hypothetical protein SDJN03_12289, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-20
Identity = 71/150 (47.33%), Postives = 71/150 (47.33%), Query Frame = 0 

Query: 182 MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQALVRKYRETLKHVD 241
           MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ              
Sbjct: 1   MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ-------------- 60

Query: 242 DTPTIRNRRTVNVIWSDLNKDFLTKNIPTWSQRTFGVQNIWGQPMMGHYLLFDNNNCIIS 301
                                                                       
Sbjct: 61  ------------------------------------------------------------ 74

Query: 302 PHNEAVLKACSEPPPPKSSGDKISQVGKND 332
             NEAVLKACSEPPPPKSSGD ISQV K D
Sbjct: 121 --NEAVLKACSEPPPPKSSGDGISQVEKKD 74

[Close]
BLAST of Lsi09G017550 vs. TAIR 10
Match: AT1G27435.1 (unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 4.7e-16
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 0 

Query: 184 GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQ 228
           GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQ
Sbjct: 6   GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQ 49

The following BLAST results are available for this feature:
BLAST of Lsi09G017550 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi09G017550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CB861.4e-2046.67uncharacterized protein LOC103498876 OS=Cucumis melo OX=3656 GN=LOC103498876 PE=... [more]
A0A0A0KDH21.9e-2046.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G092000 PE=4 SV=1[more]
A0A6J1H7612.4e-2046.67uncharacterized protein LOC111461104 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1KU884.6e-1945.33uncharacterized protein LOC111497673 OS=Cucurbita maxima OX=3661 GN=LOC111497673... [more]
A0A6J1D5J58.7e-1844.16uncharacterized protein LOC111017505 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
BLAST of Lsi09G017550 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014631.12.4e-3050.89hypothetical protein SDJN02_24810, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7025221.12.2e-2345.56hypothetical protein SDJN02_11716 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6576111.11.9e-2248.67hypothetical protein SDJN03_26750, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038875024.11.6e-2148.00uncharacterized protein LOC120067546 [Benincasa hispida][more]
KAG6592813.11.7e-2047.33hypothetical protein SDJN03_12289, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Lsi09G017550 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G27435.14.7e-1686.36unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37703:SF2RIBOSOMAL PROTEIN L31-RELATEDcoord: 182..229
NoneNo IPR availablePANTHERPTHR37703RIBOSOMAL PROTEIN L31-RELATEDcoord: 182..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G017550.1Lsi09G017550.1mRNA