Lsi09G017010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi09G017010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmajor pollen allergen Ole e 6-like
Locationchr09: 25524932 .. 25526107 (+)
RNA-Seq ExpressionLsi09G017010
SyntenyLsi09G017010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAACATCGACTGTCTTAAATCATTTTTTTCGCTATTTCCATAGACATTTCATACGTTTTTGAGTTCCACGTCGATTTAAGGAATGCATCAACCTTAAAAAAGGCAATTATATAACAAAAATAATGATGGGTGAATGCTAAATCGTTTATAAATAGAAAACATATGAAATTATTTACAAATGTAGAAATTTTTTTCTATATTTGTAAATAGAGGAATTTTTAAAAATAGATTAATAAGGGAAACTATTTACACAAAATAACAAAATTTTTAAGATAGTTATGATAGATGCTAATAGAAGTCTATCAGGATCTATCAGTGATAGAATTTCTATCACTGATAAATACTGATAGAAGTTTATCAATGTCTTTTTAATATTTTTTGTAAATATTTTGACATTTTTTCTATTTGTGATAATTTTCCTTTTCTATATTTGAAAATAACTATGTTTTATTTTTATAAAATTTTAAATATTTCCATATGGAAATTTTCATACAATTGATATTTTGAAATGTTATTTTTAATAAGTATTATTTATTATATTAATTTCAATTGTTGTGTTTGTTTCACAGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT

mRNA sequence

ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGA

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAADKLHIDLH
Homology
BLAST of Lsi09G017010 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-08
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 36 DAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAADKL 78
          +A++K CY+TC KEC +KG+G +FCE+KCD DC+ K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAADKLHIDLH 83
          +CEVKCDEDCNEKE ADKLHI+LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAADKLHIDLH 83
          +CEVKCDEDCNEKE ADKLHI+LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EEVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MA KMIA+FLM IVVVAALQFA AN E+V +YEAKFDAKYKSC+ETC KECL  GSG+S+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCNEKEAADKLHIDLH 83
          CEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.5e-26
Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEE--VEQYEAKFDAKYKSCYETCLKECLEKG-SGE 60
          MAKKM+AVFLM IVVVA LQF  ANEE  V +YEAKFDAKYKSCYETC KECL    +GE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCNEKEAADKLHIDLH 83
          SFCEVKCDEDC+EKEAADKLHI+LH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVE--QYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKM+AVFLM IVVV +LQFATAN+E E   YEAKFDAKYK+C+ TC KEC+E+GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCNEKEAADKLHI 80
          +CEVKCDEDC  KEAADKLHI
Sbjct: 61 YCEVKCDEDCGAKEAADKLHI 81

BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKKMIAVF M IVV+AALQFATANEEV++YEAKFDAKYKSCYETC KECLE GSG++FC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60

Query: 61 EVKCDEDCNEKEAADKLHIDLH 83
          EVKCDEDC+EKE ADKLHI+LH
Sbjct: 61 EVKCDEDCDEKEKADKLHIELH 82

BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKK+IAVF M IVV+AA QFATANEEVE+YEAKF+AKYKSCYETC KECLE G+G+SFC
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATANEEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSFC 60

Query: 61 EVKCDEDCNEKEAADKLHIDLH 83
          EVKCDEDC+EKE ADKLHI+LH
Sbjct: 61 EVKCDEDCDEKETADKLHIELH 82

BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 137.9 bits (346), Expect = 4.0e-29
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKKMIAVFLM IVV+AALQF TANEEV +YEAKFDAKYKSCYETC KECLEKG+G+SFC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60

Query: 61 EVKCDEDCNEKEAADKLHI 80
          EVKCDEDC+EKE ADKLHI
Sbjct: 61 EVKCDEDCDEKETADKLHI 79

BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANE-EVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MAKKM+AVFLM IVVVAALQFATANE EV +YEAKFDAKYKSCYETC KECL  GSG+SF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCNEKEAADKLHIDLH 83
          CEVKCDEDC+EKE ADKLHI LH
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKLH 83

BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 5.7e-28
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAADKLHIDLH 83
          +CEVKCDEDCNEKE ADKLHI+LH
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O241722.3e-0854.76Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3BCS22.8e-2880.95Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5302.8e-2880.95major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0KPA73.1e-2780.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0K9Z97.5e-2680.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KDP72.4e-2476.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_038875643.12.1e-3085.37major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol... [more]
XP_038906677.13.0e-2982.93major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038906682.14.0e-2987.34major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038891517.11.5e-2885.54major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_008456958.15.7e-2880.95PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 36..80
e-value: 1.1E-15
score: 58.9
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 36..77
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 42..78
e-value: 5.0E-12
score: 45.6
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..82
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G017010.1Lsi09G017010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051213 dioxygenase activity