Lsi09G017010 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAACATCGACTGTCTTAAATCATTTTTTTCGCTATTTCCATAGACATTTCATACGTTTTTGAGTTCCACGTCGATTTAAGGAATGCATCAACCTTAAAAAAGGCAATTATATAACAAAAATAATGATGGGTGAATGCTAAATCGTTTATAAATAGAAAACATATGAAATTATTTACAAATGTAGAAATTTTTTTCTATATTTGTAAATAGAGGAATTTTTAAAAATAGATTAATAAGGGAAACTATTTACACAAAATAACAAAATTTTTAAGATAGTTATGATAGATGCTAATAGAAGTCTATCAGGATCTATCAGTGATAGAATTTCTATCACTGATAAATACTGATAGAAGTTTATCAATGTCTTTTTAATATTTTTTGTAAATATTTTGACATTTTTTCTATTTGTGATAATTTTCCTTTTCTATATTTGAAAATAACTATGTTTTATTTTTATAAAATTTTAAATATTTCCATATGGAAATTTTCATACAATTGATATTTTGAAATGTTATTTTTAATAAGTATTATTTATTATATTAATTTCAATTGTTGTGTTTGTTTCACAGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT ACCAAAAGCAAGACTTGAAATAACATCTCCAAAGGCAATAACACACCAAAGAAAAATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGAAAATTGGGGAACAAAAAGAAAGAAGAGCTCTTGCGAAGGATCAAGTAGTAATATTGTATCAAAATTAAGCTTGTAATGTGATTTTAATATCAAAATTTATAAAGTTCTTGGTCTTTGGTGTTATTGATGTGAATTGATTGGTAACGACGTCGAGAGCTCTAATTGTTATTATTGTATGGATGCAATCTCAAAATCAAAACTAGATAAGTATTTAAATTTAGAATAAAAATTTTCTAAATAAATAAAATTTTACTAAAATTATTTAAAGTGTATT ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGATAAGCTGCACATCGACTTGCATTGA MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAADKLHIDLH Homology
BLAST of Lsi09G017010 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.3e-08 Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28 Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28 Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.5e-26 Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Lsi09G017010 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24 Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30 Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29 Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida]) HSP 1 Score: 137.9 bits (346), Expect = 4.0e-29 Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida]) HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28 Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Lsi09G017010 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 5.7e-28 Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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