Lsi09G016760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Dof zinc finger protein like
Location	chr09: 25190964 .. 25191770 (-)
RNA-Seq Expression	Lsi09G016760
Synteny	Lsi09G016760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGATCATAAACCCTAATTCTTGCACAAGATCATCATCATGCATATTGGAGAAGAAATCAACAAAAAAGCCTCCTAAAGATCAAGTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTATAGTCTCACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTTAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAATAGATCAAAATCAACAACAACAATAATCTCTATTTCTTCAGCTAATCCTTCTTCTTCATCCTCATCTTCATCTGATCATTTCAACAACAACAACAACCCAAAATTACTAAATTGCCCTTCATCTCAATTTTCTACTCAAAACCCAGTTGGAAGAGATTATCTTAATCTTGCTTTCCCTTGTGCTATGTCTCATTATGCTGATCAGTTCCCTAAGGTTGAAAATGTCAACAATAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCTAAATCTAATGCCAAATTCCAATAACAATACTAATTTGGGGATTAATAGTAATAGTCAATACTCAAGTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGACGAAATTTGCTTGCTTTTCAAGAATTGAGCCAACAATCTGCTGCCCCAAATGAAGATCATCATCAAGATGAGAGGCAACGAGGGAATAATATTTCAACTGGATATTGGAGTGGGATGCTTGGGGGTGGATCATTGTAA

mRNA sequence

ATGGAAGAGATCATAAACCCTAATTCTTGCACAAGATCATCATCATGCATATTGGAGAAGAAATCAACAAAAAAGCCTCCTAAAGATCAAGTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTATAGTCTCACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTTAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAATAGATCAAAATCAACAACAACAATAATCTCTATTTCTTCAGCTAATCCTTCTTCTTCATCCTCATCTTCATCTGATCATTTCAACAACAACAACAACCCAAAATTACTAAATTGCCCTTCATCTCAATTTTCTACTCAAAACCCAGTTGGAAGAGATTATCTTAATCTTGCTTTCCCTTGTGCTATGTCTCATTATGCTGATCAGTTCCCTAAGGTTGAAAATGTCAACAATAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCTAAATCTAATGCCAAATTCCAATAACAATACTAATTTGGGGATTAATAGTAATAGTCAATACTCAAGTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGACGAAATTTGCTTGCTTTTCAAGAATTGAGCCAACAATCTGCTGCCCCAAATGAAGATCATCATCAAGATGAGAGGCAACGAGGGAATAATATTTCAACTGGATATTGGAGTGGGATGCTTGGGGGTGGATCATTGTAA

Coding sequence (CDS)

ATGGAAGAGATCATAAACCCTAATTCTTGCACAAGATCATCATCATGCATATTGGAGAAGAAATCAACAAAAAAGCCTCCTAAAGATCAAGTGAACTGCCCAAGATGCAAGTCCAACAACACAAAATTTTGTTATTACAACAATTATAGTCTCACACAACCAAGATACTTTTGCAAGTCTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTTAGAAATGTCCCTATTGGAGGAGGCTCAAGAAAGAATAGATCAAAATCAACAACAACAATAATCTCTATTTCTTCAGCTAATCCTTCTTCTTCATCCTCATCTTCATCTGATCATTTCAACAACAACAACAACCCAAAATTACTAAATTGCCCTTCATCTCAATTTTCTACTCAAAACCCAGTTGGAAGAGATTATCTTAATCTTGCTTTCCCTTGTGCTATGTCTCATTATGCTGATCAGTTCCCTAAGGTTGAAAATGTCAACAATAATTATAATTGTGGAATTGGTTTTAGGGGTTTGAGTTCTTTTATCCTAAATCTAATGCCAAATTCCAATAACAATACTAATTTGGGGATTAATAGTAATAGTCAATACTCAAGTGGGTTTTCTTTGCCTGATCTTGATGAGTTTAAGCCAAGTTTGGGTATTAATTCTGTTGATGGGTTTGGAGATGGACGAAATTTGCTTGCTTTTCAAGAATTGAGCCAACAATCTGCTGCCCCAAATGAAGATCATCATCAAGATGAGAGGCAACGAGGGAATAATATTTCAACTGGATATTGGAGTGGGATGCTTGGGGGTGGATCATTGTAA

Protein sequence

MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKLLNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNSNNNTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQSAAPNEDHHQDERQRGNNISTGYWSGMLGGGSL

Homology

[Close]

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-32
Identity = 119/331 (35.95%), Postives = 172/331 (51.96%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKS--------TKKPPKDQ-VNCPRCKSNNTKFCYYNNYSL 60
           +EEI+  N+C +     L+ +           +P KDQ VNCPRC S NTKFCYYNNYSL
Sbjct: 15  LEEIVT-NTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSL 74

Query: 61  TQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFN 120
           TQPRYFCK CRRYWTEGGSLRN+P+GGGSRKN+ +S ++   IS+ +  S+  ++  H +
Sbjct: 75  TQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK-RSHSSSSDISNNHSDSTQPATKKHLS 134

Query: 121 NNNNPKLLNCPSSQFSTQNP----VGRDYLNLAF-PCAM--SHYADQFPKV---ENVNNN 180
           ++++  L++      + QNP      +  LNL F P  M  +++ D    +    N +NN
Sbjct: 135 DHHH-HLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDLIHNIGNNTNKSNN 194

Query: 181 YNCGIGFRGLSSFILNLMPNSNNNTNLGINSNSQY-----------SSGFSLPDLDEFKP 240
            N  +     S+   + +    NN+N G +SNS +           S GFS+   D +KP
Sbjct: 195 NNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPASGGFSMQ--DHYKP 254

Query: 241 ----------SLGINSVDGF-------------GD---GRNLLAFQEL----SQQSAAPN 268
                     SL  +  +GF             GD   GR+L  F++L    S  SA  N
Sbjct: 255 CNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDVNGRHLFPFEDLKLPVSSSSATIN 314

[Close]

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-31
Identity = 121/341 (35.48%), Postives = 167/341 (48.97%), Query Frame = 0


Query: 1   MEEIINPNSCTR------SSSCILEKKSTKKPPKDQ-VNCPRCKSNNTKFCYYNNYSLTQ 60
           M EI+  N+C +      S +  +E+K+  +P KDQ +NCPRC S NTKFCYYNNYSLTQ
Sbjct: 15  MNEIVT-NTCLKQQSNPPSPATPVERKA--RPEKDQALNCPRCNSLNTKFCYYNNYSLTQ 74

Query: 61  PRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFNNN 120
           PRYFCK CRRYWT GGSLRN+P+GGG RKN+  S+ +    SS++PSSSSSS    F NN
Sbjct: 75  PRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNS----SSSSPSSSSSSKKPLFANN 134

Query: 121 NNPKLLNCPSSQFSTQNP-VGRDYLNLAFPCAMSHYADQFPKVENVNNNYN--CGIGFRG 180
           N       P+      NP +G            S       +V+++N  ++   GIG   
Sbjct: 135 NT------PTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHNH 194

Query: 181 LSSF--ILNLMPNSNNNTN-----------LGINSNSQYSS------------------- 240
            SS    L ++P+S+   N           LGI+S+S  S+                   
Sbjct: 195 HSSIPEFLQVVPSSSMKNNPLVSTSSSLELLGISSSSASSNSRPAFMSYPNVHDSSVYTA 254

Query: 241 ---GFSLPDLDEF-KPSLGIN-----------SVDGFGDGRNLLAFQELSQQSAAP---- 268
              G S P   EF +P+LG +              G  +GR LL F+ L +   +     
Sbjct: 255 SGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPLLPFESLLKLPVSSSSTN 314

[Close]

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot
Match: Q43385 (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 3.8e-31
Identity = 105/267 (39.33%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 21  KSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGS 80
           ++ K  P+++VNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVP+GG S
Sbjct: 64  ETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 123

Query: 81  RKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKL--LNCPSSQFSTQ--NPVGRDY 140
           RKN+  ST        A+PS              NPKL  LN P   FS+Q  N   +D 
Sbjct: 124 RKNKRSSTPL------ASPS--------------NPKLPDLN-PPILFSSQIPNKSNKDL 183

Query: 141 LNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNSNN--NTNLGINSNS 200
             L+FP    H+      +E + +N   G+  RG+++F+   M +SN+   ++LG  +  
Sbjct: 184 NLLSFPVMQDHH---HHALELLRSN---GVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMP 243

Query: 201 QY-SSGFSLPDLDEFKPSLGINSV-----------DGFGDGRNLLAFQELSQQSAAPNED 260
            Y  S  +L    +    +G N++           D  G  R L  F ++ + S+   E 
Sbjct: 244 DYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTTQEK 294

Query: 261 HHQDERQRGNNISTGYWSGMLG--GGS 268
            H      GNN    YW+GM    GGS
Sbjct: 304 SH------GNNT---YWNGMFSNTGGS 294

[Close]

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 98/256 (38.28%), Postives = 128/256 (50.00%), Query Frame = 0


Query: 24  KKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKN 83
           K  P++++NCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVP+GG SRKN
Sbjct: 73  KARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132

Query: 84  RSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKLLNCPSSQFSTQNPVGRDYLN-LAFP 143
           +  S+++  +I    PSS           + NP +L   S+Q   ++      LN L+FP
Sbjct: 133 KRSSSSSSSNILQTIPSSLP---------DLNPPILF--SNQIHNKSKGSSQDLNLLSFP 192

Query: 144 CAMSHYAD--------QFPKVENVNN-----NYNCGIGFRGLSSFILN----LMPNSNNN 203
                +          Q PK+E   N       +      G SS  ++    L    N +
Sbjct: 193 VMQDQHHHHVHMSQFLQMPKMEGNGNITHQQQPSSSSSVYGSSSSPVSALELLRTGVNVS 252

Query: 204 TNLGINSNSQ-------------YSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQEL 249
           +  GINS+                SSGF  P + ++KPS    S D  G G N       
Sbjct: 253 SRSGINSSFMPSGSMMDSNTVLYTSSGF--PTMVDYKPSNLSFSTDHQGLGHN------S 309

[Close]

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 25  KPPKDQ-VNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKN 84
           +P K++ +NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GGGSRKN
Sbjct: 73  RPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 132

Query: 85  RSKSTTTIIS-ISSANPSSSSSSSSDHFNNNNNPKLLNCPSSQFSTQNPVGRDYLNLAFP 143
           +  S++ + S  +SA+ S++ S S        NPKL++            G   LNLAFP
Sbjct: 133 KRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMH-----------EGAQDLNLAFP 181

[Close]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL
Match: A0A6J1H6N0 (dof zinc finger protein DOF3.7-like OS=Cucurbita moschata OX=3662 GN=LOC111460991 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.1e-73
Identity = 169/273 (61.90%), Postives = 198/273 (72.53%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M + INPN  +RSSS      S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKINPNPSSRSSSL----SSSREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF--NNNNNPKL 120
           CRRYWTEGGSLRNVP+GGGSRK+R  +TTT +S       SSSSSSSDHF  NNNNN +L
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSRKSATTTTVS------CSSSSSSSDHFKNNNNNNARL 120

Query: 121 LNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNL 180
            N PSSQ           LN+AFPCAM+H+ +    VEN+NN      G+RGLSSFI NL
Sbjct: 121 PNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNN------GYRGLSSFIPNL 180

Query: 181 MPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQSA 240
           MPNSNN + +LG +         SLP + EFKPSLGIN VDGFG+G NL+ FQ+L+Q S 
Sbjct: 181 MPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGNGPNLVGFQQLNQSSC 237

Query: 241 A-PNE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
             PNE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 GEPNECDDHQKERQQGNNISSGFWSGMLGGGSL 237

[Close]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL
Match: A0A6J1KS65 (dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111498170 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.7e-72
Identity = 169/274 (61.68%), Postives = 195/274 (71.17%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M + IN    +R SS +L   S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKINSKPSSRLSSSLL--SSSREAPKEPRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF---NNNNNPK 120
           CRRYWTEGGSLRNVP+GGGSRK+R  +TTT          SSSSSSSDHF   NNN+N +
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSRKSTTTT--------SCSSSSSSSDHFKNKNNNSNAR 120

Query: 121 LLNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILN 180
           L N PSSQ           LN+AFPCAM+H+ +    VEN+NN      GFRGLSSFI N
Sbjct: 121 LPNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNN------GFRGLSSFIPN 180

Query: 181 LMPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQS 240
           LMPNSNN + +LG +         SLP LDEFKPSLGIN VDGFG G NL+ FQEL+Q S
Sbjct: 181 LMPNSNNIDADLGYH---------SLP-LDEFKPSLGINCVDGFGGGPNLVGFQELNQNS 238

Query: 241 AA-PNE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
              PNE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 CGEPNECDDHQKERQQGNNISSGFWSGMLGGGSL 238

[Close]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL
Match: A0A0A0KAL6 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G103520 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-69
Identity = 174/259 (67.18%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 20  KKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGG 79
           K +T K PK+Q++CPRCKSNNTKFCYYNNYSL QPRYFCKSCRRYWTEGGSLRNVPIGG 
Sbjct: 18  KATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGA 77

Query: 80  SRKNRSKSTTTIISISSANPSSSSSSSSDHF--NNNNNPKLLNCP-SSQFSTQNPVGRDY 139
           SRKNRSKS++T     +   ++S+SSSSD+F  NNN N KL N P SSQ STQ PVG   
Sbjct: 78  SRKNRSKSSST-----TTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRD 137

Query: 140 LNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNS---NNNTNLGINSN 199
           LNLA      H  D  PKVENVN N N   GFRGLSSFI NLMPNS   NNN NLGINSN
Sbjct: 138 LNLA-----DH--DHLPKVENVNYN-NFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSN 197

Query: 200 SQY-SSGFSLPD-LDEFKPSLGINSVDGFGDGRNL--LAFQELSQQSAAPNEDHHQDERQ 259
           SQY SSGFSL D +DEFKPS GINSV    DGRNL  L FQEL+QQSAAPNE  HQ+   
Sbjct: 198 SQYPSSGFSLGDHVDEFKPSFGINSV----DGRNLLQLPFQELNQQSAAPNEGDHQN--- 247

Query: 260 RGNNISTGYWSGMLGGGSL 269
                    WS MLGGGSL
Sbjct: 258 ---------WSEMLGGGSL 247

[Close]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL
Match: A0A1S3CC55 (dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103498802 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.1e-68
Identity = 177/269 (65.80%), Postives = 191/269 (71.00%), Query Frame = 0


Query: 16  CILEKKSTK----KPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSL 75
           C LE K TK    K PK+Q+NCPRCKSNNTKFCYYNNYSL QPRYFCKSCRRYWTEGGSL
Sbjct: 10  CKLEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSL 69

Query: 76  RNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF--NNNNNPKLLNCP-SSQFST 135
           RNVPIGG SRKNRSK        +S++ ++S+SSSSD+F  NNN N KL N P SSQ ST
Sbjct: 70  RNVPIGGASRKNRSK--------ASSSTTTSTSSSSDYFCSNNNKNKKLPNYPSSSQIST 129

Query: 136 QNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNS---NNN 195
           Q PVG   LNLA      H  D  PKVENVNN  N   GFRGLSSFI NLMP+S   NNN
Sbjct: 130 QIPVGLRDLNLA-----DH--DHLPKVENVNNYNNFAFGFRGLSSFIPNLMPDSNNINNN 189

Query: 196 TNLGINSN--SQY-SSGFSLPD-LDEFKPSLGINSVDGFGDGRN-LLAFQELSQQSAAPN 255
            NLGINS+  SQY SSGFSL D +DEFKPS GINSV    D RN LL FQEL+QQSAAPN
Sbjct: 190 GNLGINSSHYSQYSSSGFSLGDHVDEFKPSFGINSV----DRRNLLLPFQELNQQSAAPN 247

Query: 256 E-DHHQDERQRGNNISTGYWSGMLGGGSL 269
           E D HQ+            WSGMLGGGSL
Sbjct: 250 EGDDHQN------------WSGMLGGGSL 247

[Close]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL
Match: E5GCN0 (F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 3.1e-68
Identity = 177/269 (65.80%), Postives = 191/269 (71.00%), Query Frame = 0


Query: 16  CILEKKSTK----KPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSL 75
           C LE K TK    K PK+Q+NCPRCKSNNTKFCYYNNYSL QPRYFCKSCRRYWTEGGSL
Sbjct: 10  CKLEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSL 69

Query: 76  RNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF--NNNNNPKLLNCP-SSQFST 135
           RNVPIGG SRKNRSK        +S++ ++S+SSSSD+F  NNN N KL N P SSQ ST
Sbjct: 70  RNVPIGGASRKNRSK--------ASSSTTTSTSSSSDYFCSNNNKNKKLPNYPSSSQIST 129

Query: 136 QNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNS---NNN 195
           Q PVG   LNLA      H  D  PKVENVNN  N   GFRGLSSFI NLMP+S   NNN
Sbjct: 130 QIPVGLRDLNLA-----DH--DHLPKVENVNNYNNFAFGFRGLSSFIPNLMPDSNNINNN 189

Query: 196 TNLGINSN--SQY-SSGFSLPD-LDEFKPSLGINSVDGFGDGRN-LLAFQELSQQSAAPN 255
            NLGINS+  SQY SSGFSL D +DEFKPS GINSV    D RN LL FQEL+QQSAAPN
Sbjct: 190 GNLGINSSHYSQYSSSGFSLGDHVDEFKPSFGINSV----DRRNLLLPFQELNQQSAAPN 247

Query: 256 E-DHHQDERQRGNNISTGYWSGMLGGGSL 269
           E D HQ+            WSGMLGGGSL
Sbjct: 250 EGDDHQN------------WSGMLGGGSL 247

[Close]

BLAST of Lsi09G016760 vs. NCBI nr
Match: XP_038875469.1 (dof zinc finger protein DOF1.8-like [Benincasa hispida])

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-102
Identity = 215/272 (79.04%), Postives = 229/272 (84.19%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILE-KKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCK 60
           MEE INPN       CILE KK + KPPK+ +NCPRCKSNNTKFCYYNNYSLTQPRYFCK
Sbjct: 1   MEE-INPN------PCILEMKKKSTKPPKEPLNCPRCKSNNTKFCYYNNYSLTQPRYFCK 60

Query: 61  SCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKLL 120
           SCRRYWTEGGSLRNVPIGGGSRKNRSKS+TT ISISSA   SSSSSSSDHFNNNNNPKL 
Sbjct: 61  SCRRYWTEGGSLRNVPIGGGSRKNRSKSSTT-ISISSA--PSSSSSSSDHFNNNNNPKLP 120

Query: 121 NCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIG-FRGLSSFILNL 180
           N PSSQFSTQNP+G    NLA           FPKVENVNN+YNCGIG FRGLS+FI NL
Sbjct: 121 NYPSSQFSTQNPIGLRDFNLA-----------FPKVENVNNSYNCGIGNFRGLSTFIPNL 180

Query: 181 MPNS-NNNTNLGINSNS-QYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQS 240
           MPNS NNN NLGINSNS QY +GFSLPD+DEFKPSLGI+SVDGFGDGRNLL FQEL+QQ+
Sbjct: 181 MPNSNNNNANLGINSNSDQYPTGFSLPDIDEFKPSLGIHSVDGFGDGRNLLPFQELNQQT 240

Query: 241 AAPNEDHHQDERQRGNNISTGYWSGMLGGGSL 269
           AAPNE  HQ+ERQ+G NISTGYWSGMLGGGSL
Sbjct: 241 AAPNEGDHQNERQQGINISTGYWSGMLGGGSL 251

[Close]

BLAST of Lsi09G016760 vs. NCBI nr
Match: XP_022960172.1 (dof zinc finger protein DOF3.7-like [Cucurbita moschata])

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-73
Identity = 169/273 (61.90%), Postives = 198/273 (72.53%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M + INPN  +RSSS      S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKINPNPSSRSSSL----SSSREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF--NNNNNPKL 120
           CRRYWTEGGSLRNVP+GGGSRK+R  +TTT +S       SSSSSSSDHF  NNNNN +L
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSRKSATTTTVS------CSSSSSSSDHFKNNNNNNARL 120

Query: 121 LNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNL 180
            N PSSQ           LN+AFPCAM+H+ +    VEN+NN      G+RGLSSFI NL
Sbjct: 121 PNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNN------GYRGLSSFIPNL 180

Query: 181 MPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQSA 240
           MPNSNN + +LG +         SLP + EFKPSLGIN VDGFG+G NL+ FQ+L+Q S 
Sbjct: 181 MPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGNGPNLVGFQQLNQSSC 237

Query: 241 A-PNE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
             PNE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 GEPNECDDHQKERQQGNNISSGFWSGMLGGGSL 237

[Close]

BLAST of Lsi09G016760 vs. NCBI nr
Match: XP_023005072.1 (dof zinc finger protein DOF3.7-like [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 5.5e-72
Identity = 169/274 (61.68%), Postives = 195/274 (71.17%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M + IN    +R SS +L   S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKINSKPSSRLSSSLL--SSSREAPKEPRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF---NNNNNPK 120
           CRRYWTEGGSLRNVP+GGGSRK+R  +TTT          SSSSSSSDHF   NNN+N +
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSRKSTTTT--------SCSSSSSSSDHFKNKNNNSNAR 120

Query: 121 LLNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILN 180
           L N PSSQ           LN+AFPCAM+H+ +    VEN+NN      GFRGLSSFI N
Sbjct: 121 LPNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNN------GFRGLSSFIPN 180

Query: 181 LMPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQS 240
           LMPNSNN + +LG +         SLP LDEFKPSLGIN VDGFG G NL+ FQEL+Q S
Sbjct: 181 LMPNSNNIDADLGYH---------SLP-LDEFKPSLGINCVDGFGGGPNLVGFQELNQNS 238

Query: 241 AA-PNE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
              PNE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 CGEPNECDDHQKERQQGNNISSGFWSGMLGGGSL 238

[Close]

BLAST of Lsi09G016760 vs. NCBI nr
Match: KAG6592928.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.2 bits (718), Expect = 9.5e-72
Identity = 169/274 (61.68%), Postives = 199/274 (72.63%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M +  N N  +RSSS +    S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKTNSNPSSRSSSSL---SSSREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHF---NNNNNPK 120
           CRRYWTEGGSLRNVP+GGGSRK+R KSTTT  ++S     SSSSSSSDHF   NNNNN +
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSR-KSTTTTTTMS----CSSSSSSSDHFKNKNNNNNAR 120

Query: 121 LLNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILN 180
           L N PSSQ           LN+AFPCAM+H+ +    VEN+NN+     G+RGLSSFI N
Sbjct: 121 LPNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNND-----GYRGLSSFIPN 180

Query: 181 LMPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELSQQS 240
           LMPNSNN + +LG +         SLP + EFKPSLGIN VDGFG G NL+ FQ+L+Q S
Sbjct: 181 LMPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGSGPNLVGFQQLNQSS 240

Query: 241 AA-PNE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
              PNE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 CGEPNECDDHQKERQQGNNISSGFWSGMLGGGSL 241

[Close]

BLAST of Lsi09G016760 vs. NCBI nr
Match: KAG7025336.1 (Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 3.6e-71
Identity = 170/277 (61.37%), Postives = 197/277 (71.12%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60
           M +  NPN  +RSSS  L   S+++ PK+  +CPRCKSNNTKFCYYNNYSLTQPRYFCKS
Sbjct: 1   MNQKTNPNPSSRSSSS-LSLSSSREAPKELRSCPRCKSNNTKFCYYNNYSLTQPRYFCKS 60

Query: 61  CRRYWTEGGSLRNVPIGGGSRKNR-SKSTTTIISISSANPSSSSSSSSDHF-----NNNN 120
           CRRYWTEGGSLRNVP+GGGSRK+R S STTT +S       SSSSSSSDHF     NNNN
Sbjct: 61  CRRYWTEGGSLRNVPVGGGSRKSRKSSSTTTTMS------CSSSSSSSDHFKNKNKNNNN 120

Query: 121 NPKLLNCPSSQFSTQNPVGRDYLNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSF 180
           N +L N PSSQ           LN+AFPCAM+H+ +    VEN+NN      G+RGLSSF
Sbjct: 121 NARLPNYPSSQ----------DLNVAFPCAMTHFVEVPKVVENMNN------GYRGLSSF 180

Query: 181 ILNLMPNSNN-NTNLGINSNSQYSSGFSLPDLDEFKPSLGINSVDGFGDGRNLLAFQELS 240
           I NLMPNSNN + +LG +         SLP + EFKPSLGIN VDGFG G NL+ FQ+L+
Sbjct: 181 IPNLMPNSNNIDADLGYH---------SLP-IGEFKPSLGINCVDGFGSGPNLVGFQQLN 240

Query: 241 QQSAAP-NE-DHHQDERQRGNNISTGYWSGMLGGGSL 269
           Q S    NE D HQ ERQ+GNNIS+G+WSGMLGGGSL
Sbjct: 241 QSSCGELNECDDHQKERQQGNNISSGFWSGMLGGGSL 244

[Close]

BLAST of Lsi09G016760 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33
Identity = 119/331 (35.95%), Postives = 172/331 (51.96%), Query Frame = 0


Query: 1   MEEIINPNSCTRSSSCILEKKS--------TKKPPKDQ-VNCPRCKSNNTKFCYYNNYSL 60
           +EEI+  N+C +     L+ +           +P KDQ VNCPRC S NTKFCYYNNYSL
Sbjct: 15  LEEIVT-NTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSL 74

Query: 61  TQPRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFN 120
           TQPRYFCK CRRYWTEGGSLRN+P+GGGSRKN+ +S ++   IS+ +  S+  ++  H +
Sbjct: 75  TQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNK-RSHSSSSDISNNHSDSTQPATKKHLS 134

Query: 121 NNNNPKLLNCPSSQFSTQNP----VGRDYLNLAF-PCAM--SHYADQFPKV---ENVNNN 180
           ++++  L++      + QNP      +  LNL F P  M  +++ D    +    N +NN
Sbjct: 135 DHHH-HLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDLIHNIGNNTNKSNN 194

Query: 181 YNCGIGFRGLSSFILNLMPNSNNNTNLGINSNSQY-----------SSGFSLPDLDEFKP 240
            N  +     S+   + +    NN+N G +SNS +           S GFS+   D +KP
Sbjct: 195 NNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPASGGFSMQ--DHYKP 254

Query: 241 ----------SLGINSVDGF-------------GD---GRNLLAFQEL----SQQSAAPN 268
                     SL  +  +GF             GD   GR+L  F++L    S  SA  N
Sbjct: 255 CNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDVNGRHLFPFEDLKLPVSSSSATIN 314

[Close]

BLAST of Lsi09G016760 vs. TAIR 10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-32
Identity = 108/289 (37.37%), Postives = 143/289 (49.48%), Query Frame = 0


Query: 21  KSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGS 80
           ++ K  P+++VNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVP+GG S
Sbjct: 64  ETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 123

Query: 81  RKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKL--LNCPSSQFSTQ--NPVGRDY 140
           RKN+  ST        A+PS              NPKL  LN P   FS+Q  N   +D 
Sbjct: 124 RKNKRSSTPL------ASPS--------------NPKLPDLN-PPILFSSQIPNKSNKDL 183

Query: 141 LNLAFPCAMSHYAD------QFPKVENVNNNYNC----------------GIGFRGLSSF 200
             L+FP    H+          PK+EN N + +                 G+  RG+++F
Sbjct: 184 NLLSFPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGMNTF 243

Query: 201 ILNLMPNSNN--NTNLGINSNSQY-SSGFSLPDLDEFKPSLGINSV-----------DGF 260
           +   M +SN+   ++LG  +   Y  S  +L    +    +G N++           D  
Sbjct: 244 LPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMN 303

Query: 261 GDGRNLLAFQELSQQSAAPNEDHHQDERQRGNNISTGYWSGMLG--GGS 268
           G  R L  F ++ + S+   E  H      GNN    YW+GM    GGS
Sbjct: 304 GASRVLFPFSDMKELSSTTQEKSH------GNNT---YWNGMFSNTGGS 322

[Close]

BLAST of Lsi09G016760 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-32
Identity = 121/341 (35.48%), Postives = 167/341 (48.97%), Query Frame = 0


Query: 1   MEEIINPNSCTR------SSSCILEKKSTKKPPKDQ-VNCPRCKSNNTKFCYYNNYSLTQ 60
           M EI+  N+C +      S +  +E+K+  +P KDQ +NCPRC S NTKFCYYNNYSLTQ
Sbjct: 15  MNEIVT-NTCLKQQSNPPSPATPVERKA--RPEKDQALNCPRCNSLNTKFCYYNNYSLTQ 74

Query: 61  PRYFCKSCRRYWTEGGSLRNVPIGGGSRKNRSKSTTTIISISSANPSSSSSSSSDHFNNN 120
           PRYFCK CRRYWT GGSLRN+P+GGG RKN+  S+ +    SS++PSSSSSS    F NN
Sbjct: 75  PRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNS----SSSSPSSSSSSKKPLFANN 134

Query: 121 NNPKLLNCPSSQFSTQNP-VGRDYLNLAFPCAMSHYADQFPKVENVNNNYN--CGIGFRG 180
           N       P+      NP +G            S       +V+++N  ++   GIG   
Sbjct: 135 NT------PTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHNH 194

Query: 181 LSSF--ILNLMPNSNNNTN-----------LGINSNSQYSS------------------- 240
            SS    L ++P+S+   N           LGI+S+S  S+                   
Sbjct: 195 HSSIPEFLQVVPSSSMKNNPLVSTSSSLELLGISSSSASSNSRPAFMSYPNVHDSSVYTA 254

Query: 241 ---GFSLPDLDEF-KPSLGIN-----------SVDGFGDGRNLLAFQELSQQSAAP---- 268
              G S P   EF +P+LG +              G  +GR LL F+ L +   +     
Sbjct: 255 SGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPLLPFESLLKLPVSSSSTN 314

[Close]

BLAST of Lsi09G016760 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 105/267 (39.33%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 21  KSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGS 80
           ++ K  P+++VNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVP+GG S
Sbjct: 64  ETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 123

Query: 81  RKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKL--LNCPSSQFSTQ--NPVGRDY 140
           RKN+  ST        A+PS              NPKL  LN P   FS+Q  N   +D 
Sbjct: 124 RKNKRSSTPL------ASPS--------------NPKLPDLN-PPILFSSQIPNKSNKDL 183

Query: 141 LNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNSNN--NTNLGINSNS 200
             L+FP    H+      +E + +N   G+  RG+++F+   M +SN+   ++LG  +  
Sbjct: 184 NLLSFPVMQDHH---HHALELLRSN---GVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMP 243

Query: 201 QY-SSGFSLPDLDEFKPSLGINSV-----------DGFGDGRNLLAFQELSQQSAAPNED 260
            Y  S  +L    +    +G N++           D  G  R L  F ++ + S+   E 
Sbjct: 244 DYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTTQEK 294

Query: 261 HHQDERQRGNNISTGYWSGMLG--GGS 268
            H      GNN    YW+GM    GGS
Sbjct: 304 SH------GNNT---YWNGMFSNTGGS 294

[Close]

BLAST of Lsi09G016760 vs. TAIR 10
Match: AT3G61850.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 105/267 (39.33%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 21  KSTKKPPKDQVNCPRCKSNNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNVPIGGGS 80
           ++ K  P+++VNCPRC S NTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVP+GG S
Sbjct: 52  ETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 111

Query: 81  RKNRSKSTTTIISISSANPSSSSSSSSDHFNNNNNPKL--LNCPSSQFSTQ--NPVGRDY 140
           RKN+  ST        A+PS              NPKL  LN P   FS+Q  N   +D 
Sbjct: 112 RKNKRSSTPL------ASPS--------------NPKLPDLN-PPILFSSQIPNKSNKDL 171

Query: 141 LNLAFPCAMSHYADQFPKVENVNNNYNCGIGFRGLSSFILNLMPNSNN--NTNLGINSNS 200
             L+FP    H+      +E + +N   G+  RG+++F+   M +SN+   ++LG  +  
Sbjct: 172 NLLSFPVMQDHH---HHALELLRSN---GVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMP 231

Query: 201 QY-SSGFSLPDLDEFKPSLGINSV-----------DGFGDGRNLLAFQELSQQSAAPNED 260
            Y  S  +L    +    +G N++           D  G  R L  F ++ + S+   E 
Sbjct: 232 DYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTTQEK 282

Query: 261 HHQDERQRGNNISTGYWSGMLG--GGS 268
            H      GNN    YW+GM    GGS
Sbjct: 292 SH------GNNT---YWNGMFSNTGGS 282

The following BLAST results are available for this feature:

BLAST of Lsi09G016760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAP8	1.5e-32	35.95	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q84JQ8	2.9e-31	35.48	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q43385	3.8e-31	39.33	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
Q9ZPY0	1.6e-26	38.28	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]
B9F1L8	2.4e-25	55.83	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]

BLAST of Lsi09G016760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6N0	1.1e-73	61.90	dof zinc finger protein DOF3.7-like OS=Cucurbita moschata OX=3662 GN=LOC11146099...	[more]
A0A6J1KS65	2.7e-72	61.68	dof zinc finger protein DOF3.7-like OS=Cucurbita maxima OX=3661 GN=LOC111498170 ...	[more]
A0A0A0KAL6	1.6e-69	67.18	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G103520 PE...	[more]
A0A1S3CC55	3.1e-68	65.80	dof zinc finger protein DOF3.7 OS=Cucumis melo OX=3656 GN=LOC103498802 PE=4 SV=1	[more]
E5GCN0	3.1e-68	65.80	F-box family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Lsi09G016760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875469.1	1.4e-102	79.04	dof zinc finger protein DOF1.8-like [Benincasa hispida]	[more]
XP_022960172.1	2.3e-73	61.90	dof zinc finger protein DOF3.7-like [Cucurbita moschata]	[more]
XP_023005072.1	5.5e-72	61.68	dof zinc finger protein DOF3.7-like [Cucurbita maxima]	[more]
KAG6592928.1	9.5e-72	61.68	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025336.1	3.6e-71	61.37	Dof zinc finger protein DOF3.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Lsi09G016760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24060.1	1.1e-33	35.95	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	1.6e-32	37.37	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	2.1e-32	35.48	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	2.7e-32	39.33	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.2	2.7e-32	39.33	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 30..85 e-value: 4.3E-32 score: 110.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 33..69
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 31..85 score: 28.518488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..268
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 17..264
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 17..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016760.1	Lsi09G016760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding