Lsi09G016700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G016700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Calcium-binding EF-hand family protein
Location	chr09: 25113833 .. 25114207 (+)
RNA-Seq Expression	Lsi09G016700
Synteny	Lsi09G016700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAAATCATGATACCTCAAGCAAAGTAGATGAAGGATATGAAGACTTGTTGCCAGTGATGGCGCAAAAGCTCGACGTTGAGGTGTTTGTGGCTGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACACAACGAAAGGGTTGATAACGGCAGAGAGTTTACGGCGAAACTCGGTGCTGTTGGGAATGGAAGGGATGAACGAGCACGAAGCAGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAGAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAA

mRNA sequence

ATGGACCAAAATCATGATACCTCAAGCAAAGTAGATGAAGGATATGAAGACTTGTTGCCAGTGATGGCGCAAAAGCTCGACGTTGAGGTGTTTGTGGCTGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACACAACGAAAGGGTTGATAACGGCAGAGAGTTTACGGCGAAACTCGGTGCTGTTGGGAATGGAAGGGATGAACGAGCACGAAGCAGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAGAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAA

Coding sequence (CDS)

ATGGACCAAAATCATGATACCTCAAGCAAAGTAGATGAAGGATATGAAGACTTGTTGCCAGTGATGGCGCAAAAGCTCGACGTTGAGGTGTTTGTGGCTGAGCTTTGCAGCGGTTTTCGGCTGCTTGCCGACACAACGAAAGGGTTGATAACGGCAGAGAGTTTACGGCGAAACTCGGTGCTGTTGGGAATGGAAGGGATGAACGAGCACGAAGCAGAGTCGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGGCTTCAGAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAA

Protein sequence

MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELSKSSC

Homology

[Close]

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 3.9e-39
Identity = 77/113 (68.14%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 7   TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEG 66
           +++K++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+EG
Sbjct: 14  STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73

Query: 67  MNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           M++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KA+ +EL
Sbjct: 74  MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

[Close]

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.5e-22
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 7   TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGME 66
           T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN + +LG+ 
Sbjct: 11  TQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLG 70

Query: 67  GMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 119
            + + +   M++EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 71  DLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEE 123

[Close]

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.6e-22
Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAE 74
           ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + + +  
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 75  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 119
            M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

[Close]

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAES 74
           + D L VM QK+  +    E+   F+L  D   G I+ ++L+R +  LG E +++ E + 
Sbjct: 86  FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQE 145

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           M+ E D DGDG +NE EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot
Match: Q12798 (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAES 74
           + D L VM QK+  +    E+   FRL  D   G I+ ++L+R +  LG E + + E + 
Sbjct: 86  FNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQE 145

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           M+ E D DGDG +NE EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEEEFLRIMKKTS 170

[Close]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL
Match: A0A5A7TCH3 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00290 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQNH+TSS+VDEGYEDLLPVMAQKLDVEVFV+ELCSGFRLLAD TKGLITAESLRRNS 
Sbjct: 1   MDQNHNTSSRVDEGYEDLLPVMAQKLDVEVFVSELCSGFRLLADATKGLITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS
Sbjct: 61  LLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120

Query: 121 KSSC 125
           KSSC
Sbjct: 121 KSSC 124

[Close]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL
Match: A0A0A0KAP2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNS 60
           MDQNH+TS +V DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLAD TKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  VLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
            LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 121 SKSSC 125
            KSSC
Sbjct: 121 GKSSC 125

[Close]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL
Match: A0A6J1KWH6 (calcium-binding protein KIC OS=Cucurbita maxima OX=3661 GN=LOC111499333 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQN  TSS+V E YEDLLP+MAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS 
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPLMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 121 KSSC 125
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL
Match: A0A6J1H361 (calcium-binding protein KIC OS=Cucurbita moschata OX=3662 GN=LOC111459966 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.1e-52
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQN  TSS+V E YEDLLPVMAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLR+NS 
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRQNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 121 KSSC 125
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL
Match: A0A061DS74 (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_005098 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.5e-43
Identity = 93/117 (79.49%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 7   TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEG 66
           T S     YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +GLIT ESLRRNS LLGMEG
Sbjct: 9   TPSTTTSQYEDLLPVMAEKLDVEAFVSELCGGFRLLADQERGLITPESLRRNSALLGMEG 68

Query: 67  MNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELSKSS 124
           M++ EAE MVREGDLDGDGALN+ EFCILMVRLSPGMMEDAE WLQKAID+EL KSS
Sbjct: 69  MSKDEAEGMVREGDLDGDGALNQTEFCILMVRLSPGMMEDAETWLQKAIDQELRKSS 125

[Close]

BLAST of Lsi09G016700 vs. NCBI nr
Match: KAA0039766.1 (Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 118/124 (95.16%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQNH+TSS+VDEGYEDLLPVMAQKLDVEVFV+ELCSGFRLLAD TKGLITAESLRRNS 
Sbjct: 1   MDQNHNTSSRVDEGYEDLLPVMAQKLDVEVFVSELCSGFRLLADATKGLITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS
Sbjct: 61  LLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120

Query: 121 KSSC 125
           KSSC
Sbjct: 121 KSSC 124

[Close]

BLAST of Lsi09G016700 vs. NCBI nr
Match: XP_004140505.1 (calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein Csa_005589 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56
Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNS 60
           MDQNH+TS +V DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLAD TKGLITAESLRRNS
Sbjct: 1   MDQNHNTSGRVLDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADATKGLITAESLRRNS 60

Query: 61  VLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
            LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL
Sbjct: 61  ALLGMEGMNENEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120

Query: 121 SKSSC 125
            KSSC
Sbjct: 121 GKSSC 125

[Close]

BLAST of Lsi09G016700 vs. NCBI nr
Match: XP_038875235.1 (calcium-binding protein KIC [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQN+DTSS VDE YEDL PVMAQKLDVE+FVAELCSGFRLL+DT KGLITAESLRRNS 
Sbjct: 1   MDQNNDTSSGVDEAYEDLFPVMAQKLDVEMFVAELCSGFRLLSDTAKGLITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS
Sbjct: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120

Query: 121 KS 123
           KS
Sbjct: 121 KS 122

[Close]

BLAST of Lsi09G016700 vs. NCBI nr
Match: XP_023547367.1 (calcium-binding protein KIC [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQN  TSS+V E YEDLLPVMAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS 
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPVMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 121 KSSC 125
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Lsi09G016700 vs. NCBI nr
Match: XP_023006677.1 (calcium-binding protein KIC [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 1   MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSV 60
           MDQN  TSS+V E YEDLLP+MAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS 
Sbjct: 1   MDQNQHTSSRVVEEYEDLLPLMAQKLDVEVFVAELCSGFRLLADASKGVITAESLRRNSA 60

Query: 61  LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEELS 120
           LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAE WLQKA+DEELS
Sbjct: 61  LLGMEGMKKEEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEGWLQKALDEELS 120

Query: 121 KSSC 125
           K SC
Sbjct: 121 KVSC 124

[Close]

BLAST of Lsi09G016700 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-40
Identity = 77/113 (68.14%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 7   TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEG 66
           +++K++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+EG
Sbjct: 14  STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEG 73

Query: 67  MNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEEL 120
           M++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMEDAE WL+KA+ +EL
Sbjct: 74  MSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQEL 126

[Close]

BLAST of Lsi09G016700 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 7   TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGME 66
           T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN + +LG+ 
Sbjct: 11  TQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLG 70

Query: 67  GMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 119
            + + +   M++EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 71  DLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEE 123

[Close]

BLAST of Lsi09G016700 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 104.4 bits (259), Expect = 6.8e-23
Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAE 74
           ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + + +  
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 75  SMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQKAIDEE 119
            M+ EGD D DGALN+MEFC+LM RLSP +ME +   + + I+EE
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEE 123

[Close]

BLAST of Lsi09G016700 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 52.4 bits (124), Expect = 3.1e-07
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 1   MDQN------HDTSSKVDEG------YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKG 60
           +DQN      HD  +++D        + + L +MA+KL       EL   F++      G
Sbjct: 41  LDQNPTEQELHDIITEIDSDSNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNG 100

Query: 61  LITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRL 100
            I+A  L    + LG E + + E E M++E DLDGDG +N  EF  +M+ +
Sbjct: 101 YISASELSHVMINLG-EKLTDEEVEQMIKEADLDGDGQVNYDEFVKMMINI 150

[Close]

BLAST of Lsi09G016700 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 51.2 bits (121), Expect = 6.9e-07
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 15  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAES 74
           ++D L +MAQ    E    EL   FR+      GLI+   L      +GM+ +   EAE 
Sbjct: 66  FDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMK-ITAEEAEH 125

Query: 75  MVREGDLDGDGALNEMEFCILMVRLS 101
           MVRE DLDGDG L+  EF  +M+  S
Sbjct: 126 MVREADLDGDGFLSFHEFSKMMIAAS 150

The following BLAST results are available for this feature:

BLAST of Lsi09G016700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPX9	3.9e-39	68.14	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
O81831	2.5e-22	46.90	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9LSQ6	9.6e-22	49.52	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
Q2TBN3	3.0e-07	36.05	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q12798	3.9e-07	37.21	Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1	[more]

BLAST of Lsi09G016700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TCH3	1.3e-58	95.16	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KAP2	1.2e-56	93.60	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G106800 PE=...	[more]
A0A6J1KWH6	5.4e-52	87.10	calcium-binding protein KIC OS=Cucurbita maxima OX=3661 GN=LOC111499333 PE=4 SV=...	[more]
A0A6J1H361	7.1e-52	87.10	calcium-binding protein KIC OS=Cucurbita moschata OX=3662 GN=LOC111459966 PE=4 S...	[more]
A0A061DS74	3.5e-43	79.49	Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_005098 ...	[more]

BLAST of Lsi09G016700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039766.1	2.8e-58	95.16	Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]	[more]
XP_004140505.1	2.6e-56	93.60	calcium-binding protein KIC [Cucumis sativus] >KGN46528.1 hypothetical protein C...	[more]
XP_038875235.1	2.2e-55	93.44	calcium-binding protein KIC [Benincasa hispida]	[more]
XP_023547367.1	5.0e-52	87.90	calcium-binding protein KIC [Cucurbita pepo subsp. pepo]	[more]
XP_023006677.1	1.1e-51	87.10	calcium-binding protein KIC [Cucurbita maxima]	[more]

BLAST of Lsi09G016700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46600.1	2.8e-40	68.14	Calcium-binding EF-hand family protein	[more]
AT4G27280.1	1.8e-23	46.90	Calcium-binding EF-hand family protein	[more]
AT5G54490.1	6.8e-23	49.52	pinoid-binding protein 1	[more]
AT4G14640.1	3.1e-07	31.53	calmodulin 8	[more]
AT3G51920.1	6.9e-07	39.53	calmodulin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 13..123 e-value: 8.4E-22 score: 79.3
None	No IPR available	PANTHER	PTHR47319:SF4	CALCIUM-BINDING PROTEIN KIC	coord: 3..121
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 47..98 e-value: 1.0E-17 score: 63.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 67..102 score: 9.687501
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 3..121
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 80..92
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 19..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016700.1	Lsi09G016700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding