
Lsi09G016640 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTATGTCATCAACTAACAATGTACCAAGATAAATTGAAGCAGAAATTAAGACATACAATTATTAATTATCAATTAGTTAAATAATTAAATTGTTATCAAAAGTAATACTATATACTACGTTATTATTAAATAACAAAAACACTATTTAAAAAGAAAAAAGAAAAAAAAAATCCATCCAAGGCTACACAAGTGGTGAAGGGGGTTGGGGAGTGGTTGTCAACAATCCATTTATTAAAGATTCAAAGCCGAAAGGATCGCCGTTTATCAGTCTTAAAATGTGTTAAGCACTTTGACTTTTACACTTATAGATTTCCATAAACTCAACTTTTCAAACCAAATCCCAGAATTATGACCTTATTTTCCCCTTTCTTCTCTCTATCTCAGCATTTGGCCTCCATTTTCTACCATTATTTTTCTTGGTCATATCACCATTTCTATCTTTTTTATGCCTTTTCTTGACATCTTTACATTGGGATCTTTCTTCCTATGCCAATTCCACCATTTCCCATATGAAATAAGTTAGCAAAATTCAATCTTTTCTTCTTTTTCATTCTCTGATCTTTGTTTGTGAAATATTTAATATCATGTCCATCTTGAGCAAATCCAATAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTCTGCTGAACTGTAAGTTCATTAATTTCCTGTTCTTACTCAAGTTCCTGATATATATGTATGTGGATTGATTGCTGCTGATCCTCCAAATTTCTTTTGTTTTTTTGCTTTTCAGATTGACTGAAGAAGCTATCAGTGGAAACCCTGATGCAAGATCTTTGAGTTCAATATCAAAAGCAGCTTTTGAGGTTGATGACTTTTGGAGAATTGTAGCAATTCTCCATAAAAGGTTTTGACTCTGTACTTCTTTGATCAATGTTTTAAAGTTCTCTGAGTTTCTATTTCAATATGAATTTAGACCTTCTGATTCTCATGAACAAAACCCATCATCGATAAGTTAAAAGATTCGAAGTGTGTAAAGTCTATACTATCTTTTAGGCCACGTTGGATAACGATTTTATTTTGGGTTTTCACATTTCTTAAACAAAAACACATTTATGAAAACTATTTTGTTTAGTTTTCAAAACTTGGTTTGGTTTCTTTAAACATCGATAGAAATTGGGTAACAACTTCTTCAGCAACAGACTCAATTCTATAACACCCTCTGATTTGACCGATCAACAAATATGCAAGCATACATTTCATGTTTTTTTGAGTAATAGCAATGAGATCATAAAATAAAGAAACTTATGGGTGGGAGTAGTGTTTACAAGCATAATTTACAAAAACAGAAAACCAAAAACAAAATAGTTACCGAATGAGATCTTGGTTTTTTCTTTATTCCTTAAAAATGTAGTTTTGATCTGACTTTAAATTGTCCACCATTAATTTTGCTGATGGGATCCATGATTGATAAAAGTAAACAAACTTGCAAGGCAGATTGCTGAAATTTGAAAAGAAGAACTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTAACCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTAATGTCTGTTTTCATGTTTTTAGATATGTGTTCGGTAGTCAGTCGAAAGCCATCTTTCTCTAATGAAAAGATGTATTTGATTATATTCATAATTGGATGCTGATTTGTTTAATAGGTTCAATTGGGGGATTGCAGTGAGAAAGAGATCAGAGAGGATATTGAACCTGCTTGACAAAGGGTCTGTCCTTAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAGATTCTAGGATTTGGAAGCTTCTCTTTAAGATCAAAGTGTCCAGAAATTGTGGAAGATTCTTCTTCTTCACCCATTGGAAGATATGGAAAGTGCAATTCCAACTTCAACAGTGTTGAGAATCTTGACCAAGAAGAACATTTGGTTTTATTAGAAAAAAAGGATGGAATTTCAGCTAATGATTATCATCCTTTCATCAACGACGAAACAAAATCGAATGCTTCATTGCTTTTGGGATAATGACAGAGGAATTTGGAATTTTTTTTGAGTTCCATTCATGATTCAATGTCATATTTACATGTACTTGACTAGATTGACATAAGAAATAAACATGCTACCAATGAAAGGAAAAGAGATTTTTGTTTTGAAGAATCTGAAAATTAGTAGTGGTTGGTTTTTTGTGCCTTGCAGAGTTCAAAAGGAAAGCTAAAAGTTTAGCATCTAATCTGTATCAAGATTAGAACTTTATAAGAAACTTTCATATTTTATTGTTGGAATTGTTCACTTTTGACACTTGAAAGGTGAAAAAAGTTATGTGTACAACGATATGGGA ATGGATTATGTCATCAACTAACAATGTACCAAGATAAATTGAAGCAGAAATTAAGACATACAATTATTAATTATCAATTAGTTAAATAATTAAATTGTTATCAAAAGTAATACTATATACTACGTTATTATTAAATAACAAAAACACTATTTAAAAAGAAAAAAGAAAAAAAAAATCCATCCAAGGCTACACAAGTGGTGAAGGGGGTTGGGGAGTGGTTGTCAACAATCCATTTATTAAAGATTCAAAGCCGAAAGGATCGCCGTTTATCAGTCTTAAAATGTGTTAAGCACTTTGACTTTTACACTTATAGATTTCCATAAACTCAACTTTTCAAACCAAATCCCAGAATTATGACCTTATTTTCCCCTTTCTTCTCTCTATCTCAGCATTTGGCCTCCATTTTCTACCATTATTTTTCTTGGTCATATCACCATTTCTATCTTTTTTATGCCTTTTCTTGACATCTTTACATTGGGATCTTTCTTCCTATGCCAATTCCACCATTTCCCATATGAAATAAGTTAGCAAAATTCAATCTTTTCTTCTTTTTCATTCTCTGATCTTTGTTTGTGAAATATTTAATATCATGTCCATCTTGAGCAAATCCAATAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTCTGCTGAACTATTGACTGAAGAAGCTATCAGTGGAAACCCTGATGCAAGATCTTTGAGTTCAATATCAAAAGCAGCTTTTGAGGTTGATGACTTTTGGAGAATTGTAGCAATTCTCCATAAAAGATTGCTGAAATTTGAAAAGAAGAACTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTAACCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGGATTGCAGTGAGAAAGAGATCAGAGAGGATATTGAACCTGCTTGACAAAGGGTCTGTCCTTAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAGATTCTAGGATTTGGAAGCTTCTCTTTAAGATCAAAGTGTCCAGAAATTGTGGAAGATTCTTCTTCTTCACCCATTGGAAGATATGGAAAGTGCAATTCCAACTTCAACAGTGTTGAGAATCTTGACCAAGAAGAACATTTGGTTTTATTAGAAAAAAAGGATGGAATTTCAGCTAATGATTATCATCCTTTCATCAACGACGAAACAAAATCGAATGCTTCATTGCTTTTGGGATAATGACAGAGGAATTTGGAATTTTTTTTGAGTTCCATTCATGATTCAATGTCATATTTACATGTACTTGACTAGATTGACATAAGAAATAAACATGCTACCAATGAAAGGAAAAGAGATTTTTGTTTTGAAGAATCTGAAAATTAGTAGTGGTTGGTTTTTTGTGCCTTGCAGAGTTCAAAAGGAAAGCTAAAAGTTTAGCATCTAATCTGTATCAAGATTAGAACTTTATAAGAAACTTTCATATTTTATTGTTGGAATTGTTCACTTTTGACACTTGAAAGGTGAAAAAAGTTATGTGTACAACGATATGGGA ATGTCCATCTTGAGCAAATCCAATAGTATGGCCACTCCCTCTTTCCATGAGTTGAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAAATCAAGACTGCCAGATTAGCCCTCACAGATGTCACCTCTGCTGAACTATTGACTGAAGAAGCTATCAGTGGAAACCCTGATGCAAGATCTTTGAGTTCAATATCAAAAGCAGCTTTTGAGGTTGATGACTTTTGGAGAATTGTAGCAATTCTCCATAAAAGATTGCTGAAATTTGAAAAGAAGAACTGGAGACTTTCCTACAACTCTCTCATCATTCTTGAACATCTCTTGACTCATGGACCAGAGAGTGTAGCAGAGGAGTTTCAGACTGACAAAGATGTTATTAACCAAATGGGAACTTTCCAATATGTTGATGAAAAGGGGTTCAATTGGGGGATTGCAGTGAGAAAGAGATCAGAGAGGATATTGAACCTGCTTGACAAAGGGTCTGTCCTTAAAGAAGAGAGGGAAAAGGCTAGAAAGTTGACAAGAGAGATTCTAGGATTTGGAAGCTTCTCTTTAAGATCAAAGTGTCCAGAAATTGTGGAAGATTCTTCTTCTTCACCCATTGGAAGATATGGAAAGTGCAATTCCAACTTCAACAGTGTTGAGAATCTTGACCAAGAAGAACATTTGGTTTTATTAGAAAAAAAGGATGGAATTTCAGCTAATGATTATCATCCTTTCATCAACGACGAAACAAAATCGAATGCTTCATTGCTTTTGGGATAA MSILSKSNSMATPSFHELKKQASFFFKEKIKTARLALTDVTSAELLTEEAISGNPDARSLSSISKAAFEVDDFWRIVAILHKRLLKFEKKNWRLSYNSLIILEHLLTHGPESVAEEFQTDKDVINQMGTFQYVDEKGFNWGIAVRKRSERILNLLDKGSVLKEEREKARKLTREILGFGSFSLRSKCPEIVEDSSSSPIGRYGKCNSNFNSVENLDQEEHLVLLEKKDGISANDYHPFINDETKSNASLLLG Homology
BLAST of Lsi09G016640 vs. ExPASy Swiss-Prot
Match: Q99KN9 (Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 4.4e-13 Identity = 40/129 (31.01%), Postives = 71/129 (55.04%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy Swiss-Prot
Match: A7Z035 (Clathrin interactor 1 OS=Bos taurus OX=9913 GN=CLINT1 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.7e-13 Identity = 45/160 (28.12%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy Swiss-Prot
Match: Q14677 (Clathrin interactor 1 OS=Homo sapiens OX=9606 GN=CLINT1 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.7e-13 Identity = 45/160 (28.12%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy Swiss-Prot
Match: Q8VY07 (Clathrin interactor EPSIN 1 OS=Arabidopsis thaliana OX=3702 GN=EPSIN1 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12 Identity = 51/184 (27.72%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy Swiss-Prot
Match: O95208 (Epsin-2 OS=Homo sapiens OX=9606 GN=EPN2 PE=1 SV=3) HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12 Identity = 53/185 (28.65%), Postives = 94/185 (50.81%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy TrEMBL
Match: A0A1S3CAD9 (ENTH domain-containing protein C794.11c-like OS=Cucumis melo OX=3656 GN=LOC103498779 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122 Identity = 231/253 (91.30%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy TrEMBL
Match: A0A0A0KDV3 (ENTH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108500 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 7.2e-120 Identity = 224/244 (91.80%), Postives = 235/244 (96.31%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy TrEMBL
Match: A0A5A7T920 (ENTH domain-containing protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003100 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.1e-119 Identity = 224/244 (91.80%), Postives = 235/244 (96.31%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy TrEMBL
Match: A0A6J1DDE5 (clathrin interactor EPSIN 1 OS=Momordica charantia OX=3673 GN=LOC111019473 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.3e-100 Identity = 195/227 (85.90%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of Lsi09G016640 vs. ExPASy TrEMBL
Match: A0A6J1GBK0 (clathrin interactor EPSIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111452671 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 7.8e-98 Identity = 209/309 (67.64%), Postives = 230/309 (74.43%), Query Frame = 0
BLAST of Lsi09G016640 vs. NCBI nr
Match: XP_038875427.1 (clathrin interactor 1-like [Benincasa hispida]) HSP 1 Score: 454.9 bits (1169), Expect = 4.5e-124 Identity = 234/254 (92.13%), Postives = 246/254 (96.85%), Query Frame = 0
BLAST of Lsi09G016640 vs. NCBI nr
Match: XP_004140497.1 (clathrin interactor 1 [Cucumis sativus] >KAE8646791.1 hypothetical protein Csa_005646 [Cucumis sativus]) HSP 1 Score: 451.4 bits (1160), Expect = 5.0e-123 Identity = 231/252 (91.67%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of Lsi09G016640 vs. NCBI nr
Match: XP_008459736.1 (PREDICTED: ENTH domain-containing protein C794.11c-like [Cucumis melo]) HSP 1 Score: 448.0 bits (1151), Expect = 5.5e-122 Identity = 231/253 (91.30%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Lsi09G016640 vs. NCBI nr
Match: KAA0039750.1 (ENTH domain-containing protein-like protein [Cucumis melo var. makuwa] >TYK24747.1 ENTH domain-containing protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118 Identity = 224/244 (91.80%), Postives = 235/244 (96.31%), Query Frame = 0
BLAST of Lsi09G016640 vs. NCBI nr
Match: XP_022151559.1 (clathrin interactor EPSIN 1 [Momordica charantia]) HSP 1 Score: 375.9 bits (964), Expect = 2.7e-100 Identity = 195/227 (85.90%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of Lsi09G016640 vs. TAIR 10
Match: AT3G46540.1 (ENTH/VHS family protein ) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70 Identity = 139/244 (56.97%), Postives = 182/244 (74.59%), Query Frame = 0
BLAST of Lsi09G016640 vs. TAIR 10
Match: AT1G08670.1 (ENTH/VHS family protein ) HSP 1 Score: 167.2 bits (422), Expect = 1.7e-41 Identity = 108/250 (43.20%), Postives = 153/250 (61.20%), Query Frame = 0
BLAST of Lsi09G016640 vs. TAIR 10
Match: AT3G23350.1 (ENTH/VHS family protein ) HSP 1 Score: 158.3 bits (399), Expect = 8.1e-39 Identity = 85/193 (44.04%), Postives = 126/193 (65.28%), Query Frame = 0
BLAST of Lsi09G016640 vs. TAIR 10
Match: AT5G11710.1 (ENTH/VHS family protein ) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13 Identity = 51/184 (27.72%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Lsi09G016640 vs. TAIR 10
Match: AT3G59290.1 (ENTH/VHS family protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-11 Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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