Lsi09G016400 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTGAATTGAGTTTCCCTTTTTTGAGTTTCATTTGTCTGCCTAAACTGAGTTTTATTTGTCTGCCTAAACATGTACTTCGTGTGGCTTCTTTTTAAAGGTTATTTTCTTTTCATTACTTCTTGTTTTTCATGATTAAAGATAGCAGAAAAACTTTCTGCATACATGTCCAGGTCTTTCTACATTATTAAAAAAAATAAAATAGAAAAATAATGAGTAAGAAATCAAATTATTCAACTTTTAGTGTCCTTCGGTTAGTTCAATCTCAAAATATACATGTGGACTTCCCTATGACCATATCGATGAGGAAAAACTCCATTCTTCTCCAAGATCCAAATCCAAATGTAAGATGACTCATTAAGGTTTATTAATGCAAGATGGTGGGAGAGTGTTGCCCAAATCATTACCTCGGACATAGCATTGAGTCATTGACCATAGAAATAGCAAAGAAAATCATTTATAACAACCAAAAGAATATTTGAATCCATCTTCACTACATTTGTACACATGCAATTCTGAAAAAACCGACTTGACAACATGACTCACGAAATTTATTCCAAACAGCCAATATTATAAATTAAGTATCACTCAGTAAAACAAAGAAAGTAAAGAACTTACCGAAAGAGCCTGGTGCTTGGGATGATGAAGCAGCAGTTGATGTTTTGGTCGGCAACGATAAGGAACCAATTGCACTTGATGAAGAAGCCGTGCTTGTGACACCGAAACCAGTAAATGAACTCACAGCACCCGAAGAAGAAGCCGAGGGAGCGGAGGGTGCTGCTATGGACAAGGTAGTAGCAGCTGAAGAACTCGAACTAAAAGCTGGCACGGAGAAGGATGGCTGAGTTGTGCTATTTGCAGCTGGAGTAGAAGCACTGGTGGTAGTAACCGTAGAGAATAAAGGTGCCACAGTAGTTGAAAACGATAGAGAAGTAGGCTTCGTAGCTGTACTGCTCGGAGCAGAAGACCCTCCCGTCGATGCTGCATTGTTAATACTAAACCCAAAAGAAGATTGAGATGCCGACGAAGCAGGTGTGCCGAATGAGAAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGATGCAGTGGTAACATTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAGAGAGTTCTGGAATGGAGAAGTCGATGTAGATGATGAAGATGACGCAAACAAGTTTGAAGCGGAAACCGAAGAAGATGCACCGAAGGGACTAGACCCAAACAAAGTTGAACCTGCACTTCCTGAAGATGTAGATGTCCCAAACAGGGGGGAGCTAGAAGCAGAAGCCGCGGCAGCAGAAGCGCCAAACAACGCTGATCCCGGACTTGTAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATACCCCACCAAACAAGGACGGAGCCGAGGCCCCGGCAGATGGAGCAGCCCCAAACAAGGGCGTAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAACGAGGGCACAAGTGAGGTCCCAGAAGAGGGAGTAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCCCCAAACACGGGCGCAGACGAGCTCCCAGAGGATAGAGCAGCCCCAAACAAGGACGCAGACGAGTTCCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCACCTGAGGATGAAGAAACCCCAAACAAGGAAGAAGCTGAAGTTGCTGAAGAGGAAGAAGCCCCAGTGGAAGCGGCGGGGAGGGAGAAAGGGAAGGGAGAGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAAGAAGAGGAAGAAGCGGGATTGGAGGTTTGATTGGAAAATGGAGAGGAAGAGGAGGTAGGGTTTAAGGAGGAAGAAGATGAAAGAGATAAAGGGGATGATGATGCTGATGATGATCCGAAGGAGAAGGCGGAGGTGGATCCGAATGAGAAACCAGTGGCTGAGGAAAATGGAGAAGAAGAAGAAGATTGGGAGGAGGACGATCCGAAGGCGAAACCCGACATCTCGATCGATCTCCGGCGGAAGAGACTGTCAACTGAGGGTTTTAACGGGGTTTTTAGCGGAAATGGTATTTATCCAAATAATTTCAAATTTTGCAGTACGATGAATCACAAGTAAAAAAAAAAAATTAAAATATGAAATATAAAATTGGAAAATTTTTTGGAAAATTTTTAAAAATAAAAAGATAAAAATTATTTACACAAAATAGCAAAAATTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTAGAAATGATAGAAGTTTATCACTAACAAATGCGGATAGAAATCTATCAATGTCTATTTGTGTTTTTTTTTTTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATCTTTTCTAGGTAAAAATTTTTCAAATTATTTTAAATGATAAAATGCTGAAAATATTTATATATATGGACACAAATAGTAGTCTATCGCAAATAGACAGTAAAATTTTATTATATTTATAAATATTTTAGTTTATTTTCCTATATTTAAAAATAGTCCTAAAACTCTAAAATAACCATATTTGTAACTATTGGAAATTTGAAGGATTTAAAATTATAAAGGATTTGAAATAAGGGTAATTGTAGTGAGTAACAATTTTAAGGGTAATAACTTAGTGTATAACAACATTTTTTAAAAATTACAAATATAGTAAAGTCTATAAGTTATAGACTTCCATCGCTGATAGACGTTTATGGTATATATCTCAAGCGATAGAAATCTATTGTGATCTATCGCTGATAGACAATGAAATTTTTCTATATTTGTAAATAGTTTGACTCATTTTTCTATATTGAAGACATTGCATTTTTTTACTATAGTTTTCATTAAATAAACATATTAATCAAATTCTAAAAACAAAAACAAGTTTTTAAAAACTACTTTTAGTTTTCAAATTTTGACATGCGTTTTTAAAACATTAATAGAAAATGAAAAACAGACATAGAGAGCATATGAATGAAAGTAGAGCGTACAAGCTTCTTTTTTCCAAAAAAAAAAAAAAAAAAAAAGGTAAAAACCAAATGGTCATCAAAACGGAAGTTTCAATATTAGAATGGAGAATGTGATGTCTCAAAGAGGACCATGTGATGTTTAATAACCAAATGGCTTGATTTGAATGCTAGGAATCTTGAATTCATAAGATTAAGTTCTTGTTGTAACAGCATCTTTAGAAAGAAAAAAAGTGACAATGTGATAACTTGTGAATAATGCGTTATAGTATCATAATTAGTATTGACATTTTACTATTTTGAAAGCATAAATTACCATCACTTTAAGCATTTGAGGATGAACGTGCCATAACATGTGGAACCATGATTTGAACAAAACATAGAAACATATGAGTAAAGTCATTTCAAGCTCCATTCTAGAGATTTGAGTATGGTAAAGAGTTAAAAAACTCTTACATAAATGACTAGTTTTTTTTTCTTGAACTTTGATCGATTTGCTTCTAGGGTAGTATATTATTCTTGAGTAGTTTTCTAATGTACTTATAGATCTAATAAGTACTATATGTTAGAATTGAGAAACTATATGATTCAAATGTTTAGTATTATTTTATTTATTACATGTATATTATTTAGGCAGAATACTGTCACCTATTGTTACTAA ATGGACAATAAAACAAAGAAAGTAAAGAACTTACCGAAAGAGCCTGGTGCTTGGGATGATGAAGCAGCAGTTGATGTTTTGGTCGGCAACGATAAGGAACCAATTGCACTTGATGAAGAAGCCGTGCTTGTGACACCGAAACCAGTAAATGAACTCACAGCACCCGAAGAAGAAGCCGAGGGAGCGGAGGGTGTGCCGAATGAGAAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGATGCAGTGGTAACATTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAGAGAGTTCTGGAATGGAGAAGTCGATGTAGATGATGAAGATGACGCAAACAAGTTTGAAGCGGAAACCGAAGAAGATGCACCGAAGGGACTAGACCCAAACAAAGTTGAACCTGCACTTCCTGAAGATGTAGATGTCCCAAACAGGGGGGAGCTAGAAGCAGAAGCCGCGGCAGCAGAAGCGCCAAACAACGCTGATCCCGGACTTGTAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATACCCCACCAAACAAGGACGGAGCCGAGGCCCCGGCAGATGGAGCAGCCCCAAACAAGGGCGTAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAACGAGGGCACAAGTGAGGTCCCAGAAGAGGGAGTAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCCCCAAACACGGGCGCAGACGAGCTCCCAGAGGATAGAGCAGCCCCAAACAAGGACGCAGACGAGTTCCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCACCTGAGGATGAAGAAACCCCAAACAAGGAAGAAGCTGAAGTTGCTGAAGAGGAAGAAGCCCCAGTGGAAGCGGCGGGGAGGGAGAAAGGGAAGGGAGAGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAAGAAGAGGAAGAAGCGGGATTGGAGGAGGAAGAAGATGAAAGAGATAAAGGGGATGATGATGCTGATGATGATCCGAAGGAGAAGGCGGAGGTGGATCCGAATGAGAAACCAGTGGCTGAGGAAAATGGAGAAGAAGAAGAAGATTGGGAGGAGGACGATCCGAAGGCGAAACCCGACATCTCGATCGATCTCCGGCGGAAGAGACTGTCAACTGAGGGTTTTAACGGGAATACTGTCACCTATTGTTACTAA ATGGACAATAAAACAAAGAAAGTAAAGAACTTACCGAAAGAGCCTGGTGCTTGGGATGATGAAGCAGCAGTTGATGTTTTGGTCGGCAACGATAAGGAACCAATTGCACTTGATGAAGAAGCCGTGCTTGTGACACCGAAACCAGTAAATGAACTCACAGCACCCGAAGAAGAAGCCGAGGGAGCGGAGGGTGTGCCGAATGAGAAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGATGCAGTGGTAACATTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAGAGAGTTCTGGAATGGAGAAGTCGATGTAGATGATGAAGATGACGCAAACAAGTTTGAAGCGGAAACCGAAGAAGATGCACCGAAGGGACTAGACCCAAACAAAGTTGAACCTGCACTTCCTGAAGATGTAGATGTCCCAAACAGGGGGGAGCTAGAAGCAGAAGCCGCGGCAGCAGAAGCGCCAAACAACGCTGATCCCGGACTTGTAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATACCCCACCAAACAAGGACGGAGCCGAGGCCCCGGCAGATGGAGCAGCCCCAAACAAGGGCGTAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAACGAGGGCACAAGTGAGGTCCCAGAAGAGGGAGTAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGACGAAGCCGCCCCAAACACGGGCGCAGACGAGCTCCCAGAGGATAGAGCAGCCCCAAACAAGGACGCAGACGAGTTCCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCACCTGAGGATGAAGAAACCCCAAACAAGGAAGAAGCTGAAGTTGCTGAAGAGGAAGAAGCCCCAGTGGAAGCGGCGGGGAGGGAGAAAGGGAAGGGAGAGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAAGAAGAGGAAGAAGCGGGATTGGAGGAGGAAGAAGATGAAAGAGATAAAGGGGATGATGATGCTGATGATGATCCGAAGGAGAAGGCGGAGGTGGATCCGAATGAGAAACCAGTGGCTGAGGAAAATGGAGAAGAAGAAGAAGATTGGGAGGAGGACGATCCGAAGGCGAAACCCGACATCTCGATCGATCTCCGGCGGAAGAGACTGTCAACTGAGGGTTTTAACGGGAATACTGTCACCTATTGTTACTAA MDNKTKKVKNLPKEPGAWDDEAAVDVLVGNDKEPIALDEEAVLVTPKPVNELTAPEEEAEGAEGVPNEKLEELVEADVREEEDAVVTLVVLDKDVVENENPEEEEAANGEDELKFWEELEEREFWNGEVDVDDEDDANKFEAETEEDAPKGLDPNKVEPALPEDVDVPNRGELEAEAAAAEAPNNADPGLVVDADVPNNGALEVVAEDTPPNKDGAEAPADGAAPNKGVDELPEDGRAPNEGTSEVPEEGVAPNKGADELPEDEAAPNKGADELPEDEAAPNTGADELPEDRAAPNKDADEFPDEDEAPNPKEVNPPEDEETPNKEEAEVAEEEEAPVEAAGREKGKGEEVEEGKEEEPKPKEEEEAGLEEEEDERDKGDDDADDDPKEKAEVDPNEKPVAEENGEEEEDWEEDDPKAKPDISIDLRRKRLSTEGFNGNTVTYCY Homology
BLAST of Lsi09G016400 vs. ExPASy TrEMBL
Match: A0A5A7T8D7 (Major centromere autoantigen B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003170 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 2.2e-87 Identity = 238/352 (67.61%), Postives = 256/352 (72.73%), Query Frame = 0
BLAST of Lsi09G016400 vs. ExPASy TrEMBL
Match: A0A2P5CJH4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_147870 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.1e-09 Identity = 161/434 (37.10%), Postives = 206/434 (47.47%), Query Frame = 0
BLAST of Lsi09G016400 vs. ExPASy TrEMBL
Match: A0A267F393 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig019565g3 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.8e-04 Identity = 141/436 (32.34%), Postives = 208/436 (47.71%), Query Frame = 0
BLAST of Lsi09G016400 vs. NCBI nr
Match: KAA0039742.1 (hypothetical protein E6C27_scaffold122G00020 [Cucumis melo var. makuwa] >TYK24754.1 major centromere autoantigen B [Cucumis melo var. makuwa]) HSP 1 Score: 332.8 bits (852), Expect = 4.5e-87 Identity = 238/352 (67.61%), Postives = 256/352 (72.73%), Query Frame = 0
BLAST of Lsi09G016400 vs. NCBI nr
Match: PON61197.1 (hypothetical protein PanWU01x14_147870 [Parasponia andersonii]) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-08 Identity = 161/434 (37.10%), Postives = 206/434 (47.47%), Query Frame = 0
BLAST of Lsi09G016400 vs. NCBI nr
Match: PON85590.1 (hypothetical protein TorRG33x02_185920 [Trema orientale]) HSP 1 Score: 59.3 bits (142), Expect = 9.7e-05 Identity = 160/423 (37.83%), Postives = 199/423 (47.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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