Lsi09G015590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G015590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	shootin-1-like
Location	chr09: 23717719 .. 23723381 (-)
RNA-Seq Expression	Lsi09G015590
Synteny	Lsi09G015590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGAATCAAGTATAGAGTATCAAGTAGCGAGTATATAACATAGAGCGTAGCATTGAGTATCGAGGATCGAAGAAACTTCTAAATCGCAGCATGTGAGTAGTTTTCAGGGTCAAATGAGTAAATTCACAAAGTGCTGATGCAAGTAGAAGGGTACTTTTCATTCAATTTCAATCTGTAGGCTATTTTTCATTTGAATCTCTAAAAATAGACTATCCGTACAAAAAAAATCCAAGCATAACACCTAAATTTTGAAAAGTAGGTCATATTTCATTCTCCCCCATTATAAACCATTTTACTTGGACACTTTTACCATTTGTTCTCTTCTTCATCCTCGGAAACCCTTCTTCACGATTCGAGAACGAGAATTGGAGGTTTCATCTTTCATGGAGGAAACCAAAGCACCACCAATCCAAGCGACAGTCCCTCCAACCACAGCTCCATCTCAGACATTGCCTCCTCTCCCTCCGAAACCCAAGAAGAGGCCACTTGACAGAAATGCTTATATCCAATATACAAAGATGCGCGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTATCAACCCAGATCAATTTTCATGTCATGGTTATTCTGTCATAATCTCTGGTAGTTTTTAACGATTTCTCAATATCTGTTTCTGGGTTTTCTTTGCATCTGGTAAAAATTAAAATGGTGATTTAGTAGCTTGAAATTGAGAGTGTTTAGTAAAAATTTGGTTTTGCTAATTTAGTATGATTCTCTACGCTAGGACGACTTTCACTTTGTTAGTGTATTTGAGACTATTTTGCTCTGGTTTTCTTTCTCTCTCTCTCTTGAAGGTTTTGAAGACTCCTGACTTTCGCAATTGCAAGGCAGCTAACGAAATTCGAGAAAGTAAGTGGACTGTGATTCGCCTTTGTCTTTTGTCCGTTAACGTTGAAAGCCTTCTCATTACGTTCCAACACTTTGCCTCAATGGAACACTTTCACTTTTTTATATTGTTTGAAATGCGAGTAGCTTGGGGAGCCAGTTCGAACAGATTTTTCTGCATTCTCGAACAAATGTTCAGGAAATAACATATTTGACAGATTGTTATCTAAAAAATTTTCCATTCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCACACGCACGGCGGGAAACAACTCTTAAGTTGTTATTAGTTCCAAAACTATGGACTTGTGGTATTAATATCCTACGAGTTTCCTTTGACACCCAAATGTTGTAGGGTCAAGCAGATTGTCCCGTGAGATTAGTCTATGGACTTGTGGTAACGAGTTCAAACGAATAATGTTTTACGAGCCTCCTAAACTAAAACGTATAAAGAGAGGCTTGAAAACAAAAACTGAAAGCTATTTCAAAACAACCCCTAAAAATGCCCAATTACTTTCTAACCCATTGGAACTATCTTCTTGTTTCCTGTTCCCAACTTGTTTTCTCATTGGTTATCTATTAATGTTTTGTATCATTGTTGCTTGTCTAAGATGTTTATATTTAGCTCAAGAGCAGATTACAAAGATTAGGATCCAAAAAAGAAACAAAATCAAGTTAATCTTATTTAAAAGTTCTCTTGTTTCTTAGCAAAATGCATCACATAAGAACACTATTCATGAGTCTCAAACTCAAAGCACCCTTTTTTCCCCTCCTCTTTTTAATGGAAGACTATCGAGGGAGGTGCCCAAAAAGCCTAAGTTTGTTCCAAAGAGTCTAGAAACAATTTTGCAGCAATGTATCTGTTCCTTTCATTCTCTATACACACTACACGCCAACTTGGATAAGGAGCAGTGTTAGGATTTCTAGACCTTTTTTTTTCACCAGTTGACACGAGGCTGATAATCCCTTCAAGATTTTTTATTTTCCCATGCGGCACTAAGATTCTATCTTAGTGAGCCTTCCATCCTCAAAACTAAAGTGGAAGAGAATACAGGGGTGTAAGTTCACCCTAAACATAGACTACAACACACCTTTTTGGGGCAAAATTTTATTTTATTTTATTCACTCTCAAGCCAAAGAATATAAAAGTTGTACACTCACCATTCCCTGGTTGAGAGTTCAAGGGGGGAACTCTCGTTTGTTTATGTTTTGAAAATTTCTAGATGACAGAATCATCCTCCCATTTGCTTTTTTCTCCGAAGCCTCCACATGTTTCATATATAATTAAAATTCAGCTATTCTGCCCCCAAAATTGCATGTAACTCCTCTGATGACAACTCCCATGCCTCCAGGGTGCCTCATTCATGCTCACCATTTGTTGTGATGGGGTGAAGATTTCTAGGTATGCCACTTGTTTTGTAATCTCGTTCTTGCATGAGACAAGTGGCGTGTGTGGACCAAGCAAGAACAAGATGTGTGACAAGTGACACATAAATAGCAGTAGGTACCTCTTACATGATAAATGGTGAGTATGGATGTGACACAACTTACACAGGTGACACGGTGCAAGCTGAAAATAGTCCTTTGAGTAGTGGACAGTTGCTTGCAATTTTTGGAGGATAACAACTTAATTTCAGTTATACATGAAACACGTGGATGTTTGGGAGAAAGATATCATGTGGGGGGATAATTTTGTGTCATTAAGGAATTGTCAAGACGTGCAAATGAGAGTTCCTTCCCCTTCCCTGTAAAAGAACAATCTTGTGGAATGTACAAGGGGTCCTTTGATGTGTGTACAACCTTTGTATTCTTTTGCCTTGTTCTAACTTCTAGCGGTCTATGTTGAGCTAAGATAGAATCTTAGCATGGGGTGAGATAGACTTTTGGTGGGATTATCATCCTCATGTCTCTTTCATCTTCCGCATTGGTTGAAACTTTTGATAGGCAAGGTACCATCTCGCAACTGCTCCTTGAAGTTTGTGTCCTCTCAATTCCCCCCAGCCTACTCTATTTAAAACCACTTTACTATCAAATGTCTTAAGTAATGACTTATATGTCTCTATATTCTAAAATCTGCCTACTAATGTTGATAATTACTCTGATCCCAAACACACTTTGTCCTTAGGGTTTAGTTGATCAACTAGTTCGACCAAAACAAATTCAAATTCAAGGATTGAGCATCAAATTGTAAGACCACTGAAAAATAAATGCAAATCTTGAGACCCAAACACTTTCTACAATGAAAATTCCCAATGGCCAGCCCCATTGATTTCCATTTGTTTTCTCATTTATTTGCTTGAATTGCTTAACTCATCCAACCAAACTGTCCAATTCCTCTCGCACAGTTGCACTGATATTGTCACTCTTCTTACCCAAAATTTAGCTTCTTTTCTTGCCTTTGGACATGGAAATCAAGGAAACAACGACATTTAGAGATTCAACACCCTTGACTTGGAAAGCCTTAGAATACATGGTAGAATTCATGATCAAGTTTCCTTGATTAGCTCCTTAAATCTGCTACCATTGTTGCTGTTTCCTTTCATCCTTTCTGCTGCCACCTCTATGAAATCAAATCCCAAATTTGGGAAGAGATTCGTCACATGGGTTTAAAGAGAAGAGGAAAATTATTTTTTAATTGAGTATCATACCCATTACTGGACCACATGCCTTCGTGAATCAAACTATTATTGTTTAGTTGAGCCTTGATACCACTCTAGACTCCAACATTTCACGAGTGATGAAACCTGAAACTCTGCTCCCTCGAGCAGTAATTCACATAAGCAATTAGATCCTTGAGGTTTATGCCCAGGCTACTCCCTCAAACTCTTCCCAGCCACGATGTTCATAACACTGCAAGTATTTTAATCACGCCCCATAGTTTTTTGTTCCTCCAAAACTTGGTTCTGAAATATTCCTTTTTGGCTTTGTCATTCTCCCTTTTCTTCAGCCATTTTACTTCCTGATGCCATCTGGCCACACCATCAATGTCTCCAAGATTCTAAATCCGACCAAATGATCTTTTCTCCAAAACCTACCTCCTCTCAAGTCCCAACCCCTCCCCCCACCCTATTCTTCTTATAACTACTACACTAACATGCTCCTTAGTTAACGACCAATATCCCCTAAATATACTAATAACGTTTCTAACTATTTCATATCCCATATGTGATGATTTAAAAGGAAGGAGCCTTGATGAGATCACTGAGGAGTGTAAGGGAGATTTGGCAGAGAATAGATCAGATTTGTCATGGCTAGTGCGCCCAAGGAGAGGTACCTAATGTCCATTAAATTTAGCCAGTCTACTATTAAGATTCCATCTGAAGTAGTGAGGCCCCAGGAGGAAGAGGGAATCCAGCACTAGCTAAACTAAAGTACATTTATTTCTTAAAAGAGAACGGAAAGAGAGAGCCACTTCACTTATATGAAGTCTTCTGTCCTGGGTTTGTTCATGGCCTCATCCAACAACCAGAAATTCTTCAAAACATGGGATACAAGTCTAATAATTGTGGAATGCATGATCTGGGTCTAGACAATGACTGTAGTTTAAGTTTAAGGAAATGTTCATATCAAATAAAAGTTTCAAGGAAATGTGGTCTGAACACCTGAAACTTGCAGGAATAAAGGTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTTGTCAGTTGATAATCAAGATCGACGACCCCGTGAACAACACCACGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGCAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAATTTCATTGCCTTCACAGGTACCGAACCAGTATATTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCACCAGAATCATGATTTTGAAAAGTAATATGCTAGGGAAGTGTTGTATGTTATCATGACTTACGATGAGCATTCAATAGATGAGATTGCTTCTATTTAGAATGCGAATGTACAATGTAGAAGTTCAAGTATGAAGATATTAACACTGATCTTCCTTTATCTAATACCTTTGTTGATTAACATCTGGAAATGGTGTCTTTGTTGAACCAATTTCTGAGTTTTCTAATTTTTCATTCTGTAAAAATGAGCTATACTATATGCATCTGAATTTAATATTTTAAATGATTAAATT

mRNA sequence

TCTGAATCAAGTATAGAGTATCAAGTAGCGAGTATATAACATAGAGCGTAGCATTGAGTATCGAGGATCGAAGAAACTTCTAAATCGCAGCATGTGAGTAGTTTTCAGGGTCAAATGAGTAAATTCACAAAGTGCTGATGCAAGTAGAAGGGTACTTTTCATTCAATTTCAATCTGTAGGCTATTTTTCATTTGAATCTCTAAAAATAGACTATCCGTACAAAAAAAATCCAAGCATAACACCTAAATTTTGAAAAGTAGGTCATATTTCATTCTCCCCCATTATAAACCATTTTACTTGGACACTTTTACCATTTGTTCTCTTCTTCATCCTCGGAAACCCTTCTTCACGATTCGAGAACGAGAATTGGAGGTTTCATCTTTCATGGAGGAAACCAAAGCACCACCAATCCAAGCGACAGTCCCTCCAACCACAGCTCCATCTCAGACATTGCCTCCTCTCCCTCCGAAACCCAAGAAGAGGCCACTTGACAGAAATGCTTATATCCAATATACAAAGATGCGCGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTCCTGACTTTCGCAATTGCAAGGCAGCTAACGAAATTCGAGAAAGAAGGAGCCTTGATGAGATCACTGAGGAGTGTAAGGGAGATTTGGCAGAGAATAGATCAGATTTGTCATGGCTAGTGCGCCCAAGGAGAGGAATAAAGGTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTTGTCAGTTGATAATCAAGATCGACGACCCCGTGAACAACACCACGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGCAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAATTTCATTGCCTTCACAGGTACCGAACCAGTATATTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCACCAGAATCATGATTTTGAAAAGTAATATGCTAGGGAAGTGTTGTATGTTATCATGACTTACGATGAGCATTCAATAGATGAGATTGCTTCTATTTAGAATGCGAATGTACAATGTAGAAGTTCAAGTATGAAGATATTAACACTGATCTTCCTTTATCTAATACCTTTGTTGATTAACATCTGGAAATGGTGTCTTTGTTGAACCAATTTCTGAGTTTTCTAATTTTTCATTCTGTAAAAATGAGCTATACTATATGCATCTGAATTTAATATTTTAAATGATTAAATT

Coding sequence (CDS)

ATGGAGGAAACCAAAGCACCACCAATCCAAGCGACAGTCCCTCCAACCACAGCTCCATCTCAGACATTGCCTCCTCTCCCTCCGAAACCCAAGAAGAGGCCACTTGACAGAAATGCTTATATCCAATATACAAAGATGCGCGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTTTTGAAGACTCCTGACTTTCGCAATTGCAAGGCAGCTAACGAAATTCGAGAAAGAAGGAGCCTTGATGAGATCACTGAGGAGTGTAAGGGAGATTTGGCAGAGAATAGATCAGATTTGTCATGGCTAGTGCGCCCAAGGAGAGGAATAAAGGTTCTACAGGACATGTATATATTGATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTTGTCAGTTGATAATCAAGATCGACGACCCCGTGAACAACACCACGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGCAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAATTTCATTGCCTTCACAGGTACCGAACCAGTATATTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCACCAGAATCATGA

Protein sequence

MEETKAPPIQATVPPTTAPSQTLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYILMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYGPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES

Homology

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BLAST of Lsi09G015590 vs. ExPASy TrEMBL
Match: A0A6J1H517 (uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC111460466 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KAP   A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKAPQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTP+FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTPEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           +MMATTSE+LYIEKTSNVLDGQSLSVDNQD+R REQHHDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 MMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEK  ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVS ES
Sbjct: 181 PEKHGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. ExPASy TrEMBL
Match: A0A6J1KWG6 (uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 8.5e-83
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KA    A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKASQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTP+FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTPEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           LMMATTSE+LYIEKTSNVLDGQS+SVDNQD+R REQ+HDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 LMMATTSESLYIEKTSNVLDGQSISVDNQDQRSREQYHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPIVS ES
Sbjct: 181 PEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. ExPASy TrEMBL
Match: A0A1S3C7F7 (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.3e-79
Identity = 170/232 (73.28%), Postives = 175/232 (75.43%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQTLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEV 60
           MEETK     A VPPTTAPSQTLPPLPPK KKRPLDRNAY+Q+TKMRAVIRDLRPHFLEV
Sbjct: 1   MEETK-----AAVPPTTAPSQTLPPLPPKLKKRPLDRNAYVQFTKMRAVIRDLRPHFLEV 60

Query: 61  LKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYILMM 120
           +KTPDFRNCKAA EIRER                              IKVLQDMY  MM
Sbjct: 61  MKTPDFRNCKAATEIRER------------------------------IKVLQDMYASMM 120

Query: 121 ATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYGPEK 180
           + TSETLYIEKT NVLDG +          REQHHDGKLGDKSSTKSYESNNPSSY PEK
Sbjct: 121 SATSETLYIEKTCNVLDGLA----------REQHHDGKLGDKSSTKSYESNNPSSYAPEK 180

Query: 181 QRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           QRANDG ISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI S ES
Sbjct: 181 QRANDGPISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 187

[Close]

BLAST of Lsi09G015590 vs. ExPASy TrEMBL
Match: A0A0A0K7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.0e-75
Identity = 166/233 (71.24%), Postives = 171/233 (73.39%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQTLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEV 60
           MEETKA         TTAPSQTLPPLPPK KKRP DRNAYIQ+TKMR VIRDLRPHFLEV
Sbjct: 1   MEETKA---------TTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEV 60

Query: 61  LKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYILMM 120
           +KTPDFRNCKAA EIRER                              IKVLQD+Y +MM
Sbjct: 61  IKTPDFRNCKAATEIRER------------------------------IKVLQDVYTMMM 120

Query: 121 ATTSETLYIEKT-SNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYGPE 180
           A TSETLYIEKT SNVLDG +          REQHHDG LGDKSSTKSYESNNPSS  PE
Sbjct: 121 AATSETLYIEKTSSNVLDGLA----------REQHHDGNLGDKSSTKSYESNNPSSNAPE 180

Query: 181 KQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           KQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI S ES
Sbjct: 181 KQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 184

[Close]

BLAST of Lsi09G015590 vs. ExPASy TrEMBL
Match: A0A6J1DSC5 (uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023072 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 4.1e-69
Identity = 156/237 (65.82%), Postives = 173/237 (73.00%), Query Frame = 0


Query: 1   MEETKAPPIQATVPP-TTAPS---QTLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPH 60
           MEE K  P   +VPP TTAPS   Q LPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPH
Sbjct: 1   MEEIKPAP---SVPPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPH 60

Query: 61  FLEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMY 120
           F+EVLK PDFRNCKAANEIRER                              IK+LQDMY
Sbjct: 61  FVEVLKAPDFRNCKAANEIRER------------------------------IKLLQDMY 120

Query: 121 ILMMATTSETLYIEKTSNVLDGQSLSVDNQD-RRPREQHHDGKLGDKSSTKSYESNNPSS 180
            LMMA+T+ETLYIEKT+N+LDGQSLSVDNQD RRPRE HHD KLGDKSS +SYESN    
Sbjct: 121 KLMMASTAETLYIEKTTNILDGQSLSVDNQDNRRPREPHHDVKLGDKSSVRSYESNY--- 180

Query: 181 YGPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
              EKQR NDG  SG+Y+VGGSAFGWNFI F G EPVYYG+TKE +REKNPIVS ES
Sbjct: 181 --LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYREKNPIVSSES 199

[Close]

BLAST of Lsi09G015590 vs. NCBI nr
Match: XP_038874738.1 (uncharacterized protein LOC120067276 [Benincasa hispida])

HSP 1 Score: 350.5 bits (898), Expect = 1.1e-92
Identity = 192/235 (81.70%), Postives = 194/235 (82.55%), Query Frame = 0


Query: 1   MEETKA---PPIQATVPPTTAPSQTLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEETKA    PIQA VPP+TAPSQTLPPLPPK KKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEETKASQSAPIQAPVPPSTAPSQTLPPLPPKLKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTPDFRNCKAANEIRER                              IKVLQDMYI
Sbjct: 61  LEVLKTPDFRNCKAANEIRER------------------------------IKVLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           LMMATTSETLYIEKTSNVLDGQS SVDNQDRR REQHHDGKLGDKSSTKSYESNNPSSY 
Sbjct: 121 LMMATTSETLYIEKTSNVLDGQSSSVDNQDRRSREQHHDGKLGDKSSTKSYESNNPSSYA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
            EKQRANDGQISGSY+VGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVS ES
Sbjct: 181 TEKQRANDGQISGSYIVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 205

[Close]

BLAST of Lsi09G015590 vs. NCBI nr
Match: KAG6575171.1 (hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-83
Identity = 175/235 (74.47%), Postives = 188/235 (80.00%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KAP   A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKAPQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTP+FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTPEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           +MMATTSE+LYIEKTSNVLDGQSLSVDNQD+R REQHHDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 MMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVS ES
Sbjct: 181 PEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. NCBI nr
Match: XP_023548253.1 (uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-83
Identity = 176/235 (74.89%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KAP   A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKAPQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTP+FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTPEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           LMMATTSE+LYIEKTS VLDGQSLSVDNQD+R REQHHDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 LMMATTSESLYIEKTSIVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPIVS ES
Sbjct: 181 PEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. NCBI nr
Match: XP_022959506.1 (uncharacterized protein LOC111460466 [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 4.6e-83
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KAP   A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKAPQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKTP+FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTPEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           +MMATTSE+LYIEKTSNVLDGQSLSVDNQD+R REQHHDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 MMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEK  ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVS ES
Sbjct: 181 PEKHGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. NCBI nr
Match: KAG7013731.1 (hypothetical protein SDJN02_23898 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-82
Identity = 174/235 (74.04%), Postives = 187/235 (79.57%), Query Frame = 0


Query: 1   MEETKAPPIQATVPPTTAPSQ---TLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60
           MEE KAP   A +PP+TAPSQ    LPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF
Sbjct: 1   MEEIKAPQ-SAPLPPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHF 60

Query: 61  LEVLKTPDFRNCKAANEIRERRSLDEITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYI 120
           LEVLKT +FRNCKAANEIRER                              IK+LQDMYI
Sbjct: 61  LEVLKTTEFRNCKAANEIRER------------------------------IKLLQDMYI 120

Query: 121 LMMATTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYG 180
           +MMATTSE+LYIEKTSNVLDGQSLSVDNQD+R REQHHDGK G KSSTKSYESN+PSS+ 
Sbjct: 121 MMMATTSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHA 180

Query: 181 PEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSPES 233
           PEKQ ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVS ES
Sbjct: 181 PEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of Lsi09G015590 vs. TAIR 10
Match: AT1G01730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-17
Identity = 82/233 (35.19%), Postives = 108/233 (46.35%), Query Frame = 0


Query: 6   APPIQATVPPTTAPSQTLPPLPPKPKKRPLDRNAYIQ---YTKMRAVIRDLRPHFLEVLK 65
           A P Q T PP+T    T  P   + +KR L+ N  I+   Y KMR +++DLRPH LEVL+
Sbjct: 44  AQPAQMTAPPSTV---TTDP-SSRGRKRALEANLQIESSNYYKMRLLVKDLRPHVLEVLR 103

Query: 66  TPDFRNCKAANEIRERRSLD-EITEECKGDLAENRSDLSWLVRPRRGIKVLQDMYILMMA 125
           TPD RN KA  EI+E+  L  ++ EE  G+             P+R      D      A
Sbjct: 104 TPDLRNSKAVIEIQEKMKLMLQLYEEMIGE------------SPKREKTAKSDSLSNGKA 163

Query: 126 TTSETLYIEKTSNVLDGQSLSVDNQDRRPREQHHDGKLGDKSSTKSYESNNPSSYGPEKQ 185
           TT+ T     T++VL                             +S E+   SS G    
Sbjct: 164 TTTTT----TTTSVL-----------------------------RSSETEKHSSDG---- 216

Query: 186 RANDGQISGSYVVGGSAFGWNFIAF--TGTEPVYYGITKEVFREKNPIVSPES 233
                   G  VVGGSAFGWNFI     GTEPVY G++KE +R  +PI+  E+
Sbjct: 224 -------DGDKVVGGSAFGWNFITSGGPGTEPVYSGMSKEEYRSSHPIMQVEA 216

The following BLAST results are available for this feature:

BLAST of Lsi09G015590 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi09G015590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H517	2.2e-83	74.04	uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A6J1KWG6	8.5e-83	74.04	uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323...	[more]
A0A1S3C7F7	3.3e-79	73.28	uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=...	[more]
A0A0A0K7F0	5.0e-75	71.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1	[more]
A0A6J1DSC5	4.1e-69	65.82	uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lsi09G015590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874738.1	1.1e-92	81.70	uncharacterized protein LOC120067276 [Benincasa hispida]	[more]
KAG6575171.1	1.2e-83	74.47	hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023548253.1	2.7e-83	74.89	uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]	[more]
XP_022959506.1	4.6e-83	74.04	uncharacterized protein LOC111460466 [Cucurbita moschata]	[more]
KAG7013731.1	1.0e-82	74.04	hypothetical protein SDJN02_23898 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi09G015590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01730.1	6.1e-17	35.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..29
None	No IPR available	PANTHER	PTHR35459:SF2	T1N6.14 PROTEIN	coord: 6..226
None	No IPR available	PANTHER	PTHR35459	T1N6.14 PROTEIN	coord: 6..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G015590.1	Lsi09G015590.1	mRNA