Homology
BLAST of Lsi09G015310 vs. ExPASy Swiss-Prot
Match:
Q6MEE7 (tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=truA1 PE=3 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 2.2e-40
Identity = 89/238 (37.39%), Postives = 143/238 (60.08%), Query Frame = 0
Query: 58 QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVH 117
Q + +IQ I+EAL L+++ + LVG+ RTD GVHA GQVAHF +Y L +H
Sbjct: 21 QPNASSIQQKIQEAL--CILLKKEKVVLVGSGRTDAGVHAKGQVAHFHFQ-DYIDLSRLH 80
Query: 118 AALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLN 177
+LNGLLP DIR++ + P +P FH+++S + K YHY ++ ++DPFQR Y++H K++
Sbjct: 81 VSLNGLLPRDIRIKAVEPVSPRFHSQYSAIRKEYHYYLHLNKVMDPFQRLYSWHFQRKID 140
Query: 178 YAAMREAANYFVGKHDFSAFTNAAHNDRV--GPL--------------VQLEVEGSGFLY 237
+++AA F G HDF++F N AH P+ ++LE EG GFLY
Sbjct: 141 VNILKKAAILFTGTHDFTSFANEAHRGTAAKNPVRTLYRLDIKPNEGGLRLEFEGDGFLY 200
Query: 238 RQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDH 280
+ VRN+VG L+ + + + +I A+++R++ + A PP+GL L+ + Y+ ++
Sbjct: 201 KMVRNIVGTLMDVASHKRAIEEINQIFAAKNRRQASLAA---PPEGLFLIQVFYENEN 252
BLAST of Lsi09G015310 vs. ExPASy Swiss-Prot
Match:
B1I1B5 (tRNA pseudouridine synthase A OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=truA PE=3 SV=1)
HSP 1 Score: 166.0 bits (419), Expect = 6.5e-40
Identity = 95/227 (41.85%), Postives = 124/227 (54.63%), Query Frame = 0
Query: 62 PTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVHAALN 121
PTIQ +E L +L L + GASRTD GVHA GQV +F+T E + AALN
Sbjct: 27 PTIQETLERCL---AELSGAALKVTGASRTDAGVHARGQVVNFVTGRWGIPTERIPAALN 86
Query: 122 GLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLNYAAM 181
G+LP DI + DFHAR+S ++K Y Y +YN + PFQR Y+ H L+ AM
Sbjct: 87 GVLPGDIAALDAREVPADFHARYSAVAKTYSYTLYNHPVRSPFQRLYSLHVPRALDLRAM 146
Query: 182 REAANYFVGKHDFSAFTNA-------------AHNDRVGPLVQLEVEGSGFLYRQVRNMV 241
R AA + +G+HDFS F A A + PLV+L GFLY VR M
Sbjct: 147 RLAARHLMGRHDFSTFQAAGRPVQSAVRTLTRADIEAQAPLVRLVFRADGFLYNMVRIMA 206
Query: 242 GLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY 276
G L+++G E + P+ +P I+AS DR A+ VPP GLCL + Y
Sbjct: 207 GTLLEVGLERLDPEALPDIIASGDR---ARAGPTVPPHGLCLEEVEY 247
BLAST of Lsi09G015310 vs. ExPASy Swiss-Prot
Match:
A3DJK8 (tRNA pseudouridine synthase A OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=truA PE=3 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 0
Query: 58 QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVH 117
Q++ T+Q IE A+ G T + + L+GASRTD GVHA GQVA+FIT +
Sbjct: 21 QKNAKTVQDTIERAIKGLT---GEKVDLIGASRTDFGVHALGQVANFITNSGIPG-DRFS 80
Query: 118 AALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLN 177
ALN +LP DI ++E DFHAR+ K Y Y IYN R TYH +KL+
Sbjct: 81 YALNRMLPDDIVIKESQEVDMDFHARYKAKGKRYRYLIYNSQFPSALLRHRTYHVSHKLD 140
Query: 178 YAAMREAANYFVGKHDFSAFTNAAHN-------------DRVGPLVQLEVEGSGFLYRQV 237
+ +M+ AA+YF+G HDFSAF ++ + +R +V+ E+ G GFLY V
Sbjct: 141 FESMQRAASYFLGTHDFSAFRSSGSSAKTSVRTITDVSLEREDKIVKFEIAGDGFLYNMV 200
Query: 238 RNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY 276
R +VG L+++G I D +P+I+ SR RK + A P +GL LV + Y
Sbjct: 201 RIIVGTLMEVGIGKIRADEIPQIIESRKRKRAGRTA---PAEGLYLVEVYY 244
BLAST of Lsi09G015310 vs. ExPASy Swiss-Prot
Match:
A5VLH4 (tRNA pseudouridine synthase A OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=truA PE=3 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 86/233 (36.91%), Postives = 129/233 (55.36%), Query Frame = 0
Query: 58 QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVH 117
Q + T++ ++ A+ K + ++G+ RTD GVHA QVAHF P++ S E++
Sbjct: 21 QPNKRTVEQTLKNAVNKIAKHPTPAIPVIGSGRTDAGVHALNQVAHFDIPYHL-SNESMR 80
Query: 118 AALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLN 177
ALN +LP+DI +++ DFHAR+S K Y Y++ G ++PF+R YT H Y LN
Sbjct: 81 KALNSILPLDILIKKAELVDNDFHARYSAHRKTYRYRVDQGEFVNPFKRNYTSHFKYPLN 140
Query: 178 YAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYR 237
MR+AA+ VG HDF++F + D V V + G+GFLY
Sbjct: 141 LEKMRKAADDLVGTHDFTSFVASGSQAKSNVRTIENITIKRDEVRNEVVFDFTGNGFLYN 200
Query: 238 QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY 276
QVR MV L++IG P D V ++L ++DR LA+ + P GL LV+++Y
Sbjct: 201 QVRIMVAFLLEIGSNQRPVDDVSRVLKAKDR-TLARMTA--PASGLYLVNVDY 249
BLAST of Lsi09G015310 vs. ExPASy Swiss-Prot
Match:
B2G8U7 (tRNA pseudouridine synthase A OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=truA PE=3 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 86/233 (36.91%), Postives = 129/233 (55.36%), Query Frame = 0
Query: 58 QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVH 117
Q + T++ ++ A+ K + ++G+ RTD GVHA QVAHF P++ S E++
Sbjct: 21 QPNKRTVEQTLKNAVNKIAKHPTPAIPVIGSGRTDAGVHALNQVAHFDIPYHL-SNESMR 80
Query: 118 AALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLN 177
ALN +LP+DI +++ DFHAR+S K Y Y++ G ++PF+R YT H Y LN
Sbjct: 81 KALNSILPLDILIKKAELVDNDFHARYSAHRKTYRYRVDQGEFVNPFKRNYTSHFKYPLN 140
Query: 178 YAAMREAANYFVGKHDFSAFTNAA---------------HNDRVGPLVQLEVEGSGFLYR 237
MR+AA+ VG HDF++F + D V V + G+GFLY
Sbjct: 141 LEKMRKAADDLVGTHDFTSFVASGSQAKSNVRTIENITIKRDEVRNEVVFDFTGNGFLYN 200
Query: 238 QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINY 276
QVR MV L++IG P D V ++L ++DR LA+ + P GL LV+++Y
Sbjct: 201 QVRIMVAFLLEIGSNQRPVDDVSRVLKAKDR-TLARMTA--PASGLYLVNVDY 249
BLAST of Lsi09G015310 vs. ExPASy TrEMBL
Match:
A0A0A0KB67 (tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G001730 PE=3 SV=1)
HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145
Identity = 268/329 (81.46%), Postives = 282/329 (85.71%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMM 60
MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRGFP+ AS + C L++
Sbjct: 1 MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLI 60
Query: 61 VPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFI 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+
Sbjct: 61 AYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFV 120
Query: 121 TPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQ 180
TPFNYDSLE+VHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQ
Sbjct: 121 TPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQ 180
Query: 181 RCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLV 240
RCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHNDRV G LV
Sbjct: 181 RCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALV 240
Query: 241 QLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL 300
QLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPPQGLCL
Sbjct: 241 QLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL 300
BLAST of Lsi09G015310 vs. ExPASy TrEMBL
Match:
A0A1S3C7L6 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1)
HSP 1 Score: 512.3 bits (1318), Expect = 1.4e-141
Identity = 262/327 (80.12%), Postives = 276/327 (84.40%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+ P L++
Sbjct: 1 MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+T
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQ 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHN+RV G LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240
Query: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV 299
LEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300
BLAST of Lsi09G015310 vs. ExPASy TrEMBL
Match:
A0A5D3BY40 (Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00780 PE=3 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 260/321 (81.00%), Postives = 272/321 (84.74%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+ P L++
Sbjct: 1 MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+T
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQ 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHN+RV G LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240
Query: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV 293
LEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300
BLAST of Lsi09G015310 vs. ExPASy TrEMBL
Match:
A0A1S3C7H4 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1)
HSP 1 Score: 493.0 bits (1268), Expect = 8.6e-136
Identity = 242/276 (87.68%), Postives = 253/276 (91.67%), Query Frame = 0
Query: 38 SPLSPASNGGCSSLMMVPDTQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHA 97
SPLSPASNGGCSSLM V D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHA
Sbjct: 22 SPLSPASNGGCSSLMTVLDMQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHA 81
Query: 98 WGQVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYN 157
WGQVAHF+TPFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYN
Sbjct: 82 WGQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYN 141
Query: 158 GAILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV----------- 217
G I+DPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHN+RV
Sbjct: 142 GTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFD 201
Query: 218 ----GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASG 277
G LVQLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASG
Sbjct: 202 VIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASG 261
Query: 278 VPPQGLCLVSINYKEDHLKLPSDCPGSSFGCSNNLG 299
VPPQGLCLVSINYKEDHLKLPSDCPG+S G S ++G
Sbjct: 262 VPPQGLCLVSINYKEDHLKLPSDCPGTSLGRSRSVG 297
BLAST of Lsi09G015310 vs. ExPASy TrEMBL
Match:
A0A6J1L0L1 (tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=1)
HSP 1 Score: 469.5 bits (1207), Expect = 1.0e-128
Identity = 243/333 (72.97%), Postives = 258/333 (77.48%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPASNGGCSSLMMVPD---- 60
M CWAVGS VLP + PLSPSIP G SS+ RGFP N SS + PD
Sbjct: 1 MSCWAVGSAVLPSVPRPLSPSIP-SRGTLSSTGRGFP-------NSEDSSCVPEPDFPSF 60
Query: 61 -----------------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWG 120
QRSPPTIQCLIEEAL GAT+LERKDLHLVGASRTDKGVHAWG
Sbjct: 61 KWRLVIAYDGTRYAGWQYQRSPPTIQCLIEEALTGATRLERKDLHLVGASRTDKGVHAWG 120
Query: 121 QVAHFITPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGA 180
QVAHFITPFNYDSL+ +HAALNGLLP DIRVREISPA PDFHARFSTLSKVYHYKIYN A
Sbjct: 121 QVAHFITPFNYDSLDRIHAALNGLLPADIRVREISPAVPDFHARFSTLSKVYHYKIYNDA 180
Query: 181 ILDPFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV------------- 240
ILDPFQRCYTYHCVYKLNYAAM+EAANYFVGKHDFSAF N AHNDRV
Sbjct: 181 ILDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFANTAHNDRVVNPVKVIFRFDVI 240
Query: 241 --GPLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVP 298
G L+QLEVEGSGFLYRQVRNMV LL+QIGKEAIPPDVVPKILASRDRK LAKY + +P
Sbjct: 241 EMGALIQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDVVPKILASRDRKVLAKYTTCIP 300
BLAST of Lsi09G015310 vs. NCBI nr
Match:
XP_038875518.1 (tRNA pseudouridine synthase A 1 isoform X3 [Benincasa hispida])
HSP 1 Score: 531.6 bits (1368), Expect = 4.5e-147
Identity = 267/306 (87.25%), Postives = 278/306 (90.85%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+ ++P L++
Sbjct: 1 MRCWAVGSPVLPPISLPLSPAIPFPNGASSSSSRGSPNAEDSSCIIAPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRN 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRN
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVGPLVQLEVEGSGFLYRQVRN 240
Query: 241 MVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLKLPSDC 293
MVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLVSINYKEDHLKLPSDC
Sbjct: 241 MVGLLVQIGKEAIPPDVVPKILASQDRRELAKYASGVPPQGLCLVSINYKEDHLKLPSDC 300
BLAST of Lsi09G015310 vs. NCBI nr
Match:
XP_038875517.1 (tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida])
HSP 1 Score: 525.4 bits (1352), Expect = 3.2e-145
Identity = 267/311 (85.85%), Postives = 278/311 (89.39%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+ ++P L++
Sbjct: 1 MRCWAVGSPVLPPISLPLSPAIPFPNGASSSSSRGSPNAEDSSCIIAPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV-----GPLVQLEVEGSGFLY 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHNDRV GPLVQLEVEGSGFLY
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKGPLVQLEVEGSGFLY 240
Query: 241 RQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLVSINYKEDHLK 293
RQVRNMVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLVSINYKEDHLK
Sbjct: 241 RQVRNMVGLLVQIGKEAIPPDVVPKILASQDRRELAKYASGVPPQGLCLVSINYKEDHLK 300
BLAST of Lsi09G015310 vs. NCBI nr
Match:
XP_038875516.1 (tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida])
HSP 1 Score: 521.5 bits (1342), Expect = 4.6e-144
Identity = 267/321 (83.18%), Postives = 278/321 (86.60%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLPLSP+IPFPNGASSSSSRG P+ ++P L++
Sbjct: 1 MRCWAVGSPVLPPISLPLSPAIPFPNGASSSSSRGSPNAEDSSCIIAPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQ 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHNDRV GPLVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIDMGPLVQ 240
Query: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV 293
LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILAS+DR+ELAKYASGVPPQGLCLV
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASQDRRELAKYASGVPPQGLCLV 300
BLAST of Lsi09G015310 vs. NCBI nr
Match:
XP_008458279.1 (PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo])
HSP 1 Score: 512.3 bits (1318), Expect = 2.8e-141
Identity = 262/327 (80.12%), Postives = 276/327 (84.40%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSP------LSPASNGGCSSLMMV 60
MRCWAVGSPVLPPISLP SP IP PNGASSSSSRGFP+ P L++
Sbjct: 1 MRCWAVGSPVLPPISLPFSPIIPSPNGASSSSSRGFPNAEDSSYITEPPFPSFKWRLLIA 60
Query: 61 PD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFIT 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+T
Sbjct: 61 YDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFVT 120
Query: 121 PFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQR 180
PFNYDSLE+VHAALNGLLPVDIRVRE+SPAAPDFHARFSTLSKVYHYKIYNG I+DPFQR
Sbjct: 121 PFNYDSLESVHAALNGLLPVDIRVREMSPAAPDFHARFSTLSKVYHYKIYNGTIMDPFQR 180
Query: 181 CYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLVQ 240
CYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHN+RV G LVQ
Sbjct: 181 CYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNNRVVNPVKVIFRFDVIEMGALVQ 240
Query: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCLV 299
LEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDRKELAKYASGVPPQGLCLV
Sbjct: 241 LEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRKELAKYASGVPPQGLCLV 300
BLAST of Lsi09G015310 vs. NCBI nr
Match:
XP_004138518.2 (uncharacterized protein LOC101205797 [Cucumis sativus] >KGN45627.2 hypothetical protein Csa_005280 [Cucumis sativus])
HSP 1 Score: 511.9 bits (1317), Expect = 3.7e-141
Identity = 262/322 (81.37%), Postives = 276/322 (85.71%), Query Frame = 0
Query: 1 MRCWAVGSPVLPPISLPLSPSIPFPNGASSSSSRGFPSPLSPAS-----NGGCSS--LMM 60
MRCWAVGSPVLPPISLPLSP IP PNGASSSSSRGFP+ AS + C L++
Sbjct: 21 MRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAEDDASYIKEPSFPCFKWRLLI 80
Query: 61 VPD--------TQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFI 120
D QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHF+
Sbjct: 81 AYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFV 140
Query: 121 TPFNYDSLENVHAALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQ 180
TPFNYDSLE+VHAALNGLLPVDIRVRE+SPA PDFHARFSTLSKVYHYKIY+G I+DPFQ
Sbjct: 141 TPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSGTIMDPFQ 200
Query: 181 RCYTYHCVYKLNYAAMREAANYFVGKHDFSAFTNAAHNDRV---------------GPLV 240
RCYTYHCVYKLNYAAM+EAANYFVGKHDFSAFTNAAHNDRV G LV
Sbjct: 201 RCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDVIEMGALV 260
Query: 241 QLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYASGVPPQGLCL 293
QLEVEGSGFLYRQVRNMVGLLVQIGKEA+PP+VVPKILASRDR+ELAKYASGVPPQGLCL
Sbjct: 261 QLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGVPPQGLCL 320
BLAST of Lsi09G015310 vs. TAIR 10
Match:
AT3G06950.1 (Pseudouridine synthase family protein )
HSP 1 Score: 334.3 bits (856), Expect = 9.8e-92
Identity = 164/251 (65.34%), Postives = 190/251 (75.70%), Query Frame = 0
Query: 58 QRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAWGQVAHFITPFNYDSLENVH 117
Q SPPTIQ ++E+ALI T+L RK+L L+GA RTD GVHAWGQVAHF+TPFNY SL++ H
Sbjct: 60 QESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAWGQVAHFVTPFNYTSLDSFH 119
Query: 118 AALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILDPFQRCYTYHCVYKLN 177
AALNGLLP DIRVRE+S A P+FHARFS SKVY Y+IYN +DPFQR + YHC YKLN
Sbjct: 120 AALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYNDTFMDPFQRHWAYHCAYKLN 179
Query: 178 YAAMREAANYFVGKHDFSAFTNAAHND---------------RVGPLVQLEVEGSGFLYR 237
+ MREAAN FVGKHDFSAF NA D ++G L+QLEVEGSGFLYR
Sbjct: 180 ASKMREAANLFVGKHDFSAFANATREDGVPDPLKTISRFDVIQMGSLLQLEVEGSGFLYR 239
Query: 238 QVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKYAS-GVPPQGLCLVSINYKEDHLK 293
QVRNMV LL+QIGKEA+ D+VP IL ++DR+ LAKY S P GLCLVS+ YKEDHLK
Sbjct: 240 QVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLPASPHGLCLVSVKYKEDHLK 299
BLAST of Lsi09G015310 vs. TAIR 10
Match:
AT1G34150.1 (Pseudouridine synthase family protein )
HSP 1 Score: 73.2 bits (178), Expect = 4.1e-13
Identity = 71/244 (29.10%), Postives = 97/244 (39.75%), Query Frame = 0
Query: 62 PTIQCLIEEALIGATKL--ERKDLHLVGASRTDKGVHAWGQVAHFITPFNY-----DSLE 121
P+I+ + +AL L ++KD RTDKGV + GQV DS
Sbjct: 114 PSIESEVFKALERTRLLVGDKKDSCYSRCGRTDKGVSSTGQVIALFLRSRLKSPPGDSKA 173
Query: 122 NVHA------------ALNGLLPVDIRVREISPAAPDFHARFSTLSKVYHYKIYNGAILD 181
V+ LN LP DIRV SPA DFHARFS ++ Y Y +
Sbjct: 174 QVNGRTGERPEYDYVRVLNRALPDDIRVIGWSPAPIDFHARFSCYAREYKYFFWR----- 233
Query: 182 PFQRCYTYHCVYKLNYAAMREAANYFVGKHDFSAF-------------------TNAAHN 241
LN +AM A F+G+HDF F + N
Sbjct: 234 -----------QNLNLSAMDFAGKKFIGEHDFRNFCKMDVANVHCYTRRVTFFEVSPCQN 293
Query: 242 DRVG-PLVQLEVEGSGFLYRQVRNMVGLLVQIGKEAIPPDVVPKILASRDRKELAKY--A 265
G L + GS FL+ Q+R MV +L IG+ DV+ +L ++ +Y A
Sbjct: 294 SHEGDQLCTFTMRGSAFLWHQIRCMVAVLFMIGQGVESVDVIDTLLDTKKTPRKPQYLLA 341
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q6MEE7 | 2.2e-40 | 37.39 | tRNA pseudouridine synthase A 1 OS=Protochlamydia amoebophila (strain UWE25) OX=... | [more] |
B1I1B5 | 6.5e-40 | 41.85 | tRNA pseudouridine synthase A OS=Desulforudis audaxviator (strain MP104C) OX=477... | [more] |
A3DJK8 | 3.9e-37 | 39.83 | tRNA pseudouridine synthase A OS=Hungateiclostridium thermocellum (strain ATCC 2... | [more] |
A5VLH4 | 1.4e-34 | 36.91 | tRNA pseudouridine synthase A OS=Lactobacillus reuteri (strain DSM 20016) OX=557... | [more] |
B2G8U7 | 1.4e-34 | 36.91 | tRNA pseudouridine synthase A OS=Lactobacillus reuteri (strain JCM 1112) OX=5574... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KB67 | 2.0e-145 | 81.46 | tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G001730 PE=3 SV=1 | [more] |
A0A1S3C7L6 | 1.4e-141 | 80.12 | tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1 | [more] |
A0A5D3BY40 | 1.2e-140 | 81.00 | Protein TRIGALACTOSYLDIACYLGLYCEROL 4 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A1S3C7H4 | 8.6e-136 | 87.68 | tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103497746 PE=3 SV=1 | [more] |
A0A6J1L0L1 | 1.0e-128 | 72.97 | tRNA pseudouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111499282 PE=3 SV=... | [more] |
Match Name | E-value | Identity | Description | |
XP_038875518.1 | 4.5e-147 | 87.25 | tRNA pseudouridine synthase A 1 isoform X3 [Benincasa hispida] | [more] |
XP_038875517.1 | 3.2e-145 | 85.85 | tRNA pseudouridine synthase A 1 isoform X2 [Benincasa hispida] | [more] |
XP_038875516.1 | 4.6e-144 | 83.18 | tRNA pseudouridine synthase A 1 isoform X1 [Benincasa hispida] | [more] |
XP_008458279.1 | 2.8e-141 | 80.12 | PREDICTED: tRNA pseudouridine synthase A 1 isoform X1 [Cucumis melo] | [more] |
XP_004138518.2 | 3.7e-141 | 81.37 | uncharacterized protein LOC101205797 [Cucumis sativus] >KGN45627.2 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G06950.1 | 9.8e-92 | 65.34 | Pseudouridine synthase family protein | [more] |
AT1G34150.1 | 4.1e-13 | 29.10 | Pseudouridine synthase family protein | [more] |