
Lsi09G015130 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAAACAAGTCCAGGTGATTCCACGGCTATTCATGAATATACAAAAATTCCACTGAAAGCCCTAAACCTCGCGACCCAGAAACCTTCCGATGGCGACCACCGACAACCTCCATGGCTCTGGTACTCCTCTTTCTTCTATGCTTCCTTCTCGTTGTTTTATGAAATTGTTATTTGGTGTAAATTTTTCAGAATCAAACAATCCTATACGAACGAGGCACTTTCATTGTTCTTCCCTTTCTTACTTCCCCTTTTTCTGTTTGCTCTCATATAACCAGAAATGTATGGTTGTGAACCGAATTCGCATCCAGCAAGTTATTTAAGATATATGCATTTTCTTACTCTTCGTGGCGCTGTAATTGTCTTTTTGAGTTGAGCCTTCTATTGTTTGCTGAAGCTTAAGAAGCGTAAGAAGCGTATTGAGATAAATAGACGAATTCTCCGTGGGCTTATAAAGGAGGCGAGAAGAACTTTTTAATTCAGTATATTCGTCCTGCAGTATTTGTACAATTTTTCAGAATTTCATTGAGGGGTTAAGTTTCCATATAGTGTAGGCATCAGAGATTTGCGATACTTGAAGGGGGGTTGCTTAAAATAACCTTCCGTATGCCCACTTTATGAAAACATTTCTTTGCTTTCGAAATTCTAACCGGATGATTTTTATGTATTTTTTAGGCCTTCAGGATCTTATAAACTATAAACTATGATGTATAATTTTGGTTTTTTTTTCCTTCTTTTCAAAACTAGCTGGTTAAATTTTGTAATTACATCTTTTTAACTGTTTTACAATACCTTCTTATATAGAGTTCCTTCAATTTTCAATGTTACAATAGTTGATTTCCAAACCTCTAGGAATTTTTCATTGTTTCATGTTTTGACCTTTGGAATTCTGTTTTTGATCTGACTGAGATTTGCAATTTATATTTTGAAGATAATTCTTCTATGGTTAATGATTATTTGAGTGAACAGAAGGCATTTGCTCCTTGAAATAATGGAAAGGAGAGTCTTGCTGTTCATTGGCGTTTTATCAACTTTTGTTGTCTTCTGGTTATCTTTATTTGCTTGCTCCATGTAAAGAGTTTAATCTTCAATACTCTTATCATATCCTTATCAAAGCATTAGTTGATCCTCCTTTCTCAAGTATTGGTTCATGTATAGTAACCTGATGCGAGGTTTCAGCTTTTACTATTTTTCCTTGGAAGGTTGAGTTTTTCATATAATATGTCAGATACTGTGAATGAAATGCCTATGGAATCAGCTAAAGAAGGATCTGCTCGTATGAGTTCAGAGGGAAAAACCAATGACACAGGTGAGAATAGGAACGGATTAGATGTCCTTTATTGCTTCTTGCTTTAATTCTTTTCCTTTCTACACTTTTTATAATGCTGTTCTTCTTTATCATGGTAGAAATAAAAGCACGGGTTGATTTGATGTGGGAGCAAATGAATAAAGGGGTGTCTGGTAAAACACTAAAAGGTTTGTCAACCAAACGATCCCCAGCTGTGAATAAAAACTCAAAGAAGCCATCAAATGTAAAAATTCACATTCTACTCTTGCATAATGAGGCAGCTCAAAATATAGGGAAAATATCTCTGACTTTTTTCTCCCCATCTCCCCTGTGTCCAGAATTGGATTGCATATCTTGGTATGACGTCGAAAAAGCCTCAAGAAAAAGAAATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTACTGATGATGCTAAGATGCTTGCTGCTACTGCTCTGTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGGTGCCAATATTTTCCTCACTATTTTTCATTGGCTTTTTTACCCTTTTAGGAATGATTGTCTAGGCATTTGGTTTTCTTTTGTTGTGAGACTTGTAGAGCTGTAGATGTATCATCTTAGTTTGTCTGGTTAGTTTGGATAATTGTTTAGAGAATTTCTGTTGTTGGGAATGGAAGGAGAAACTCATTCTTGGGGAATGGGTGTGAGGAGAAACTTACGGAAGGAGGAAAATAGATAGGAGCTGTAATTGACTTCAATGGTGAGATGAATCAAGGAAAGATAAAAGAGAGTTTGGAAGGTGGATCCATCTAGAACATTCTTGGTGAAATTTTCGGTGAAGCTACTTTGCTGAAGGGCATTACTTGCCACATTTTCGGTGAAGAAGTAATTGTTTTATTTTGGATACTACAATTTGATGCATTAATACAACAAATAAGTTGCAGAAAAGGTGTACTCTGTTGCTTTTAGGAAAAGAAGAAGAAAAGGGCCATCTGTTGCTCTAAGCTTCCAGGCAGGGGACGATCAAGCGCATTAGTCTTTTTTGATGCTCATATGGCATAAACTGTTGGGATAATCCTATTTTTGTTTTTCAGAGCCTTATAGCCGTTGGACAAATGCCCTATGGGGGATAACATATAACCTTTTCCTCGCAGTGTAAAGCTCAAAATTAAAGCCAAATTGTTATGGATTAATGGCCCATTAGAGCAATCATTGGAAGGATTTGATTTGAAAGAAATCAAATTAGAGAGTCTTTGGGGGAGAATGAATATTACAAAATACCAAGCCTCTTCTTAATGTGGCTTGTCTACCGTATTTTGTAATTATACCTCCAATGTAACTTAATTATAGTTTGGGGGGAGTCCTCCAAGAGGTTGATAGTCCTGATATTTGAGAACTGTACTTGTTGTACAAACTTTGCCCCCAATCAGATTGTGTGGTATCTAGCCTCGTTTATTTCATTTTACATTACCATTTCTTGTAAAACAGTGAAACATCAAGTTTTGGCATTGATTATATTTATCTATTAGTTGATGAACTCAAACCATTGTCCTTTTACGTTCAACAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAAATGAAGGCGCCTGCTACTTCAGCTGTCGATGTAGTCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTTGATAAAGTTTCCTTTTTGCAGCGAACTGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCAGGAGAAGGCCTGATATGCGAGAGGAGCCATAATTAAAGCCATCATCCGAAGCTCTGTGAAGAATGTGCCCTAATTTTTAAGGTTCTGAGAATTTCTTGTGCGGATCATTTTTCTGTAGGCAGTGCCGTTGGCTCGGCTATAATCGATCAGAAAGAATTCCCGTAGCACAGTTATTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCTTCGGTTATTAATATTATTCATTTGGGGAAAATACAAGATTCTCAACCACTCTGTTGTCC GGAAAACAAGTCCAGGTGATTCCACGGCTATTCATGAATATACAAAAATTCCACTGAAAGCCCTAAACCTCGCGACCCAGAAACCTTCCGATGGCGACCACCGACAACCTCCATGGCTCTGATACTGTGAATGAAATGCCTATGGAATCAGCTAAAGAAGGATCTGCTCGTATGAGTTCAGAGGGAAAAACCAATGACACAGAAATAAAAGCACGGGTTGATTTGATGTGGGAGCAAATGAATAAAGGGGTGTCTGGTAAAACACTAAAAGGTTTGTCAACCAAACGATCCCCAGCTGTGAATAAAAACTCAAAGAAGCCATCAAATAATTGGATTGCATATCTTGGTATGACGTCGAAAAAGCCTCAAGAAAAAGAAATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTACTGATGATGCTAAGATGCTTGCTGCTACTGCTCTGTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAAATGAAGGCGCCTGCTACTTCAGCTGTCGATGTAGTCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTTGATAAAGTTTCCTTTTTGCAGCGAACTGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCAGGAGAAGGCCTGATATGCGAGAGGAGCCATAATTAAAGCCATCATCCGAAGCTCTGTGAAGAATGTGCCCTAATTTTTAAGGTTCTGAGAATTTCTTGTGCGGATCATTTTTCTGTAGGCAGTGCCGTTGGCTCGGCTATAATCGATCAGAAAGAATTCCCGTAGCACAGTTATTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCTTCGGTTATTAATATTATTCATTTGGGGAAAATACAAGATTCTCAACCACTCTGTTGTCC ATGGCGACCACCGACAACCTCCATGGCTCTGATACTGTGAATGAAATGCCTATGGAATCAGCTAAAGAAGGATCTGCTCGTATGAGTTCAGAGGGAAAAACCAATGACACAGAAATAAAAGCACGGGTTGATTTGATGTGGGAGCAAATGAATAAAGGGGTGTCTGGTAAAACACTAAAAGGTTTGTCAACCAAACGATCCCCAGCTGTGAATAAAAACTCAAAGAAGCCATCAAATAATTGGATTGCATATCTTGGTATGACGTCGAAAAAGCCTCAAGAAAAAGAAATATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTACTGATGATGCTAAGATGCTTGCTGCTACTGCTCTGTCAGCTGTTAGGGATGCTACAGCTACCATTTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCTGATTCAAAGGAAGCATACGAGAAAATGAAGGCGCCTGCTACTTCAGCTGTCGATGTAGTCCTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACAAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCAAACCAATATCTTGATAAAGTTTCCTTTTTGCAGCGAACTGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCAGGAGAAGGCCTGATATGCGAGAGGAGCCATAA MATTDNLHGSDTVNEMPMESAKEGSARMSSEGKTNDTEIKARVDLMWEQMNKGVSGKTLKGLSTKRSPAVNKNSKKPSNNWIAYLGMTSKKPQEKEILSEGSKVLQNSSTDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPATSAVDVVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDARLALQARRRPDMREEP Homology
BLAST of Lsi09G015130 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12 Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-12 Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.8e-12 Identity = 78/259 (30.12%), Postives = 121/259 (46.72%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy Swiss-Prot
Match: Q8HXY9 (Craniofacial development protein 1 OS=Bos taurus OX=9913 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.3e-11 Identity = 82/284 (28.87%), Postives = 128/284 (45.07%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy Swiss-Prot
Match: Q4ADK7 (Craniofacial development protein 1 OS=Camelus dromedarius OX=9838 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.3e-11 Identity = 82/281 (29.18%), Postives = 130/281 (46.26%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy TrEMBL
Match: A0A0A0K9U3 (BCNT-C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 8.5e-124 Identity = 244/259 (94.21%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy TrEMBL
Match: A0A1S3C8V1 (LOW QUALITY PROTEIN: craniofacial development protein 1 OS=Cucumis melo OX=3656 GN=LOC103497769 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 8.5e-124 Identity = 243/259 (93.82%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 7.4e-120 Identity = 239/261 (91.57%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy TrEMBL
Match: A0A5D3BUX3 (Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00590 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.2e-119 Identity = 236/250 (94.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of Lsi09G015130 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118 Identity = 236/261 (90.42%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of Lsi09G015130 vs. NCBI nr
Match: XP_008458319.1 (PREDICTED: LOW QUALITY PROTEIN: craniofacial development protein 1 [Cucumis melo]) HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123 Identity = 243/259 (93.82%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of Lsi09G015130 vs. NCBI nr
Match: XP_004138527.1 (craniofacial development protein 1 isoform X1 [Cucumis sativus] >KGN45609.1 hypothetical protein Csa_004824 [Cucumis sativus]) HSP 1 Score: 453.0 bits (1164), Expect = 1.8e-123 Identity = 244/259 (94.21%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of Lsi09G015130 vs. NCBI nr
Match: XP_038906898.1 (craniofacial development protein 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 452.2 bits (1162), Expect = 3.0e-123 Identity = 244/259 (94.21%), Postives = 250/259 (96.53%), Query Frame = 0
BLAST of Lsi09G015130 vs. NCBI nr
Match: XP_022959426.1 (craniofacial development protein 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 439.9 bits (1130), Expect = 1.5e-119 Identity = 239/261 (91.57%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of Lsi09G015130 vs. NCBI nr
Match: TYK02974.1 (craniofacial development protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 438.3 bits (1126), Expect = 4.5e-119 Identity = 236/250 (94.40%), Postives = 243/250 (97.20%), Query Frame = 0
BLAST of Lsi09G015130 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55 Identity = 130/240 (54.17%), Postives = 171/240 (71.25%), Query Frame = 0
BLAST of Lsi09G015130 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55 Identity = 130/240 (54.17%), Postives = 171/240 (71.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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