Lsi09G014840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G014840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	outer envelope pore protein 16-2, chloroplastic
Location	chr09: 22893224 .. 22895675 (+)
RNA-Seq Expression	Lsi09G014840
Synteny	Lsi09G014840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAACGTTATTTCTCACTGACTTTAGCAATCAAATAGACTGCACTGCAGATTTCGGAGTTCATTCTCTGATTCCATACAGGATCTCGAAGAAGAAATGGGCAGTAGAAGCCTTGAGAATCGTTCATTGGTTGATGAAATCCGATGCTCCCATGGCGGAAGCTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGGTTCGTAAGCTTTCGCGAATTTGCTTTCTGTTAATTTCTTTGATAATCTTGATGTGGTAGCGTTTTGTATTGGACCTCAATGTGGTAACCTAAGATGTCGATGGTTCGTTGTACAGATAGGTGCATTGCAATCTGTGTCTCGCGAGGCTTATTTTACGGTTGCAGGAAGTAAGATTTTTTTCACTTAGTATTTCGATCTGATCCTCTTGCTTTGATTTCACTTGACTGTAATTTTATATCTCACATTTCAACTCTCTGTTTTGATTTCGTTTCACTTTCGCATATATTCTCGTTTAGGAGATGGTTGATGTTAAATCGGTTAACAAAAAAATTTGTAATGCTTGAAGAATGTTATCATCCGTACAGGTGTTGATTCGAACAATGTCGCACCGCCTGAATTATCGAGTATTAGAAAGAAACGTTTTCCAGGTCTTAAAGGTACTCATTCTTCTTCCGAAATGAGCTCTGTTCATCCACAAGCAATGTCGTCCCACTTTGTTTGATTTTGTTTTCCTTGCCTGGGGAAAGTTTGAACTATGTTGTAAATTGAGTTCTAATAATTGTGGATTGATCTGTTTGGATTGTGCATTATTTTGGGCTATATATGAAACATGTTTCAAAATTATCGTTTCATACAAACTAAAACTGGAGTGCCCTTATGGTTCTGTATAATTTGTGTAAAGTCCAATTTAGTTTGTCCTTCGAGATGCTTGAAGCTCATTTCTTGATATGATGTGCAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAGTGTTTGTAAGGGGTGATTTAAGTGTTGGGTCTGTGATTAATTATTTGCAGTGGTAGTGGTTAATAAACATCTGATAATTTTTCATTTTATGGTGTATGTTAGGTGAAGAGTGTGGGGAAAGAATCTATCCAGTGGGGTTAGTATTACTTCTCTGAATTGTTCAGATATACTATTCTGGCTTAAATGCCTTTCTTGCATATCTGGTTTATGTTTTTATGAAGTCACTAGTTAGATGGATCATTTGGTTGAGTGCGAATTTTTGCTTTCATGTCGAGTGCTTTTTCACAAACGAAAGTATTTGGTTCTTTTAAGATTCTCCCAGCGTAACTTTCATAAGTTTCTTCTCTTGGAGGTTTGAGGCTATTAAATTTACTCTTAAGCTTATAGTATTTCACCTTGGAAGACTATTTTCTCTATTTCATCCTTTTTTTTTTTTTTTTTACCCTAAAGGACATATGGAGAAAGAATAACCAAGCTTTTGGTTCAGTGGTACTGTGCTTTAATGGCATATTTAGTGGTGTAATTTAATTTTATTGTTCTCTTGCTAATTTTGTTATTTTTTTGGGCTGTAGGATTAGCTGCTGGTGTTTACTCTGGCCTCACGTACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGGTAAGCCAGCCTTCCTCAATTTACTAATAAACGTCTTAATGTTTTGATTAAAGTATGGTATAAGCAGGGGCGGGATAAATTTGTTCATTGGGGTGGGCACAATTGACTCAAAAATTTAAGCTGATGGGTGTGACCAAATTTAATCTTATATCATCAAACATATATATTACACATATTTTTAGAGAACATAAAAATCTTAACCATTGAACATAATACCAACAAATATGGAATGTTCTGACCATAGTAGTGAAAGTTTAGAGAACGTTAAAATTTAAAATCTTAACTTTCGAACAGATCATTTTCTAACCTAAAACCTACCCCTAATTCAGTCGTCACCTCAGTCCTCTGCTTAATAAAGGCAAGTCCTTGTTATATATAATTCAATCCATGAATTTCAACCAGTTGTCCTTTTTTTTTTTTTTTTTTTATGAAGAGAGTGTTGTCCTAGATCTCGAAATCTTAGTCCATTTGTTCGTTCCATTGCAGAAGAATAGTGCAATTGCAGGTGCCGTGACAGGCGTAGCTGTGGCGCTTACATCGGAAGAGTCTTCTCACGAGCATATCGTACAATATGCCATCACCGGTGCTGCTGTGTCGACGGCTGCAAATATTTTTGCTGGCATATTTTAGGCTCACCAGTATTAGGAGAGGTATGTGTATGGCCACAGTAGCCATTTCACAAAATCCGGGATGTTCGTCTTCTTATGTTCATTCTGTCTTTAATTAAGATGACTATGATGCTTCCTTCTCTTTTGGATTTTTTGTTTAATATTAAGTTGTTCCTCTGATGCTTCATTCCCGTGCT

mRNA sequence

ATGCGAACGTTATTTCTCACTGACTTTAGCAATCAAATAGACTGCACTGCAGATTTCGGAGTTCATTCTCTGATTCCATACAGGATCTCGAAGAAGAAATGGGCAGTAGAAGCCTTGAGAATCGTTCATTGGTTGATGAAATCCGATGCTCCCATGGCGGAAGCTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGGTTCATAGGTGCATTGCAATCTGTGTCTCGCGAGGCTTATTTTACGGTTGCAGGAAGTGTTGATTCGAACAATGTCGCACCGCCTGAATTATCGAGTATTAGAAAGAAACGTTTTCCAGGTCTTAAAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAGTGTGGGGAAAGAATCTATCCAGTGGGGATTAGCTGCTGGTGTTTACTCTGGCCTCACGTACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAATAGTGCAATTGCAGGTGCCGTGACAGGCGTAGCTGTGGCGCTTACATCGGAAGAGTCTTCTCACGAGCATATCGTACAATATGCCATCACCGGTGCTGCTGTGTCGACGGCTGCAAATATTTTTGCTGGCATATTTTAGGCTCACCAGTATTAGGAGAGGTATGTGTATGGCCACAGTAGCCATTTCACAAAATCCGGGATGTTCGTCTTCTTATGTTCATTCTGTCTTTAATTAAGATGACTATGATGCTTCCTTCTCTTTTGGATTTTTTGTTTAATATTAAGTTGTTCCTCTGATGCTTCATTCCCGTGCT

Coding sequence (CDS)

ATGCGAACGTTATTTCTCACTGACTTTAGCAATCAAATAGACTGCACTGCAGATTTCGGAGTTCATTCTCTGATTCCATACAGGATCTCGAAGAAGAAATGGGCAGTAGAAGCCTTGAGAATCGTTCATTGGTTGATGAAATCCGATGCTCCCATGGCGGAAGCTTCTTGTACGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCCGCTGGGGTTCATAGGTGCATTGCAATCTGTGTCTCGCGAGGCTTATTTTACGGTTGCAGGAAGTGTTGATTCGAACAATGTCGCACCGCCTGAATTATCGAGTATTAGAAAGAAACGTTTTCCAGGTCTTAAAGGTGAAACCAACAAAGAGTCTCTTGAAGCCATGGTGAAGAGTGTGGGGAAAGAATCTATCCAGTGGGGATTAGCTGCTGGTGTTTACTCTGGCCTCACGTACGGTTTAAAGGAGGCTCGTGGAGCACATGACTGGAAGAATAGTGCAATTGCAGGTGCCGTGACAGGCGTAGCTGTGGCGCTTACATCGGAAGAGTCTTCTCACGAGCATATCGTACAATATGCCATCACCGGTGCTGCTGTGTCGACGGCTGCAAATATTTTTGCTGGCATATTTTAG

Protein sequence

MRTLFLTDFSNQIDCTADFGVHSLIPYRISKKKWAVEALRIVHWLMKSDAPMAEASCTTLAILFSIALLIASSRPLGFIGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGAAVSTAANIFAGIF

Homology

[Close]

BLAST of Lsi09G014840 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-40
Identity = 87/138 (63.04%), Postives = 114/138 (82.61%), Query Frame = 0


Query: 79  IGALQSVSREAYFTV--AGSVDSNNVAPP-ELSSIRKKRFPGLKGETNKESLEAMVKSVG 138
           +GALQ+VSREAYFTV      DSNNV PP E++  +K RFP L+GE++K SL+A+VK+ G
Sbjct: 42  VGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHRFPNLRGESSK-SLDALVKNTG 101

Query: 139 KESIQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAIAGAVTGVAVAL-TSEESSHEHIVQY 198
           KES+QWGLAAG+YSG+TYG+ E R GAHDW+NSA+AGA+TG A+A+ TSE +SHE +VQ 
Sbjct: 102 KESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQS 161

Query: 199 AITGAAVSTAANIFAGIF 212
           A+TGAA+STAAN+ + +F
Sbjct: 162 ALTGAAISTAANLLSSVF 178

[Close]

BLAST of Lsi09G014840 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 119 KGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAV 178
           KG  +    E  +K + KE   WG  AGVY G+ YG++  RG  DWKN+   GAVTG  V
Sbjct: 55  KGSISSNDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALV 114

Query: 179 ALTSEESSHEHIVQYAITGAAVSTAA 205
           +  S  +  + I   AITGAA++TAA
Sbjct: 115 SAAS-NNKKDKIAVDAITGAAIATAA 139

[Close]

BLAST of Lsi09G014840 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 119 KGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAV 178
           KG  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG  +
Sbjct: 55  KGSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVL 114

Query: 179 ALTSEESSHEHIVQYAITGAAVSTAA 205
           +   ++   + IV  AI G A++TA+
Sbjct: 115 SAVGKKGK-DTIVIDAILGGALATAS 139

[Close]

BLAST of Lsi09G014840 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 130 MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEH 189
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTR--NWTQ 111

Query: 190 IVQYAITGAAVSTAAN 206
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL
Match: A0A1S3C7N2 (outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497794 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.8e-62
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN+V PPELSSIRK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 45  IGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTS+ESSHEHIVQYAITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGA 164

Query: 199 AVSTAANIFAGIF 212
           A+STAANIFAGIF
Sbjct: 165 AMSTAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL
Match: A0A0A0KCC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 7.1e-60
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN   PPELSS+RK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 94  IGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKES 153

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALT+++SSHEHIVQYAITGA
Sbjct: 154 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGA 213

Query: 199 AVSTAANIFAGIF 212
           A+STAANIFAGIF
Sbjct: 214 AMSTAANIFAGIF 226

[Close]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL
Match: A0A5D3BTY5 (Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 5.1e-58
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN+V PPELSSIRK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 45  IGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKES 104

Query: 139 IQWG-----------------------LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG 198
           IQWG                       LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG
Sbjct: 105 IQWGRYTGHLVECDLLLSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG 164

Query: 199 VAVALTSEESSHEHIVQYAITGAAVSTAANIFAGIF 212
           VAVALTS+ESSHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 165 VAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 200

[Close]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL
Match: A0A6J1KKF2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494835 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.4e-54
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGS+DS+N  P ELSS RK+  PGLKGETNKESLEAMVKSVG+ES
Sbjct: 45  IGALQSVSREAYFTVAGSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVAL S++SSHE IVQ AITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGA 164

Query: 199 AVSTAANIFAGIF 212
           AVS AANIFAGIF
Sbjct: 165 AVSAAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL
Match: A0A6J1EQH2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436880 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.9e-53
Identity = 115/133 (86.47%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGS+DS+N   PEL   RK+  PGLKGETNKESLEAMVKSVG+ES
Sbjct: 45  IGALQSVSREAYFTVAGSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVAL S++SSHE IVQ AITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGA 164

Query: 199 AVSTAANIFAGIF 212
           AVS AANIFAGIF
Sbjct: 165 AVSAAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. NCBI nr
Match: XP_008458360.1 (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-61
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN+V PPELSSIRK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 45  IGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTS+ESSHEHIVQYAITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGA 164

Query: 199 AVSTAANIFAGIF 212
           A+STAANIFAGIF
Sbjct: 165 AMSTAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. NCBI nr
Match: XP_038875334.1 (outer envelope pore protein 16-2, chloroplastic [Benincasa hispida])

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN+V PPEL+SIRK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 44  IGALQSVSREAYFTVAGSVDSNSVPPPELASIRKQRFPGLKGETNKESLEAMVKSVGKES 103

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGA+TGVAVALTS+ESSHEHIVQYAITGA
Sbjct: 104 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAMTGVAVALTSDESSHEHIVQYAITGA 163

Query: 199 AVSTAANIFAGIF 212
           AVSTAANIFAGIF
Sbjct: 164 AVSTAANIFAGIF 176

[Close]

BLAST of Lsi09G014840 vs. NCBI nr
Match: XP_011657265.1 (outer envelope pore protein 16-2, chloroplastic [Cucumis sativus] >KAE8647078.1 hypothetical protein Csa_022916 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.5e-59
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN   PPELSS+RK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 45  IGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALT+++SSHEHIVQYAITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGA 164

Query: 199 AVSTAANIFAGIF 212
           A+STAANIFAGIF
Sbjct: 165 AMSTAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. NCBI nr
Match: TYK02947.1 (outer envelope pore protein 16-2 [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-57
Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGSVDSN+V PPELSSIRK+RFPGLKGETNKESLEAMVKSVGKES
Sbjct: 45  IGALQSVSREAYFTVAGSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKES 104

Query: 139 IQWG-----------------------LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG 198
           IQWG                       LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG
Sbjct: 105 IQWGRYTGHLVECDLLLSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTG 164

Query: 199 VAVALTSEESSHEHIVQYAITGAAVSTAANIFAGIF 212
           VAVALTS+ESSHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 165 VAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 200

[Close]

BLAST of Lsi09G014840 vs. NCBI nr
Match: XP_023514075.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225.3 bits (573), Expect = 4.8e-55
Identity = 118/133 (88.72%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPPELSSIRKKRFPGLKGETNKESLEAMVKSVGKES 138
           IGALQSVSREAYFTVAGS+DS+N  PPELSS RK+  PGLKGETNKESLEAMVKSVG+ES
Sbjct: 45  IGALQSVSREAYFTVAGSLDSDNGPPPELSSARKRHVPGLKGETNKESLEAMVKSVGQES 104

Query: 139 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEHIVQYAITGA 198
           IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVAL S++SSHE IVQ AITGA
Sbjct: 105 IQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGA 164

Query: 199 AVSTAANIFAGIF 212
           AVS AANIFAGIF
Sbjct: 165 AVSAAANIFAGIF 177

[Close]

BLAST of Lsi09G014840 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-42
Identity = 87/136 (63.97%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 79  IGALQSVSREAYFTVAGSVDSNNVAPP-ELSSIRKKRFPGLKGETNKESLEAMVKSVGKE 138
           +GALQ+VSREAYFTV    DSNNV PP E++  +K RFP L+GE++K SL+A+VK+ GKE
Sbjct: 42  VGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKE 101

Query: 139 SIQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAIAGAVTGVAVAL-TSEESSHEHIVQYAI 198
           S+QWGLAAG+YSG+TYG+ E R GAHDW+NSA+AGA+TG A+A+ TSE +SHE +VQ A+
Sbjct: 102 SLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSAL 161

Query: 199 TGAAVSTAANIFAGIF 212
           TGAA+STAAN+ + +F
Sbjct: 162 TGAAISTAANLLSSVF 176

[Close]

BLAST of Lsi09G014840 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-41
Identity = 87/138 (63.04%), Postives = 114/138 (82.61%), Query Frame = 0


Query: 79  IGALQSVSREAYFTV--AGSVDSNNVAPP-ELSSIRKKRFPGLKGETNKESLEAMVKSVG 138
           +GALQ+VSREAYFTV      DSNNV PP E++  +K RFP L+GE++K SL+A+VK+ G
Sbjct: 42  VGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHRFPNLRGESSK-SLDALVKNTG 101

Query: 139 KESIQWGLAAGVYSGLTYGLKEAR-GAHDWKNSAIAGAVTGVAVAL-TSEESSHEHIVQY 198
           KES+QWGLAAG+YSG+TYG+ E R GAHDW+NSA+AGA+TG A+A+ TSE +SHE +VQ 
Sbjct: 102 KESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQS 161

Query: 199 AITGAAVSTAANIFAGIF 212
           A+TGAA+STAAN+ + +F
Sbjct: 162 ALTGAAISTAANLLSSVF 178

[Close]

BLAST of Lsi09G014840 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 119 KGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAV 178
           KG  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG  +
Sbjct: 55  KGSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVL 114

Query: 179 ALTSEESSHEHIVQYAITGAAVSTAA 205
           +   ++   + IV  AI G A++TA+
Sbjct: 115 SAVGKKGK-DTIVIDAILGGALATAS 139

[Close]

BLAST of Lsi09G014840 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 9.9e-06
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 130 MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEH 189
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTR--NWTQ 111

Query: 190 IVQYAITGAAVSTAAN 206
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of Lsi09G014840 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 9.9e-06
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 130 MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSEESSHEH 189
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA+++   +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTR--NWTQ 111

Query: 190 IVQYAITGAAVSTAAN 206
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

The following BLAST results are available for this feature:

BLAST of Lsi09G014840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMZ5	4.6e-40	63.04	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q41050	1.2e-11	44.19	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	2.0e-11	41.86	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	1.4e-04	36.84	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lsi09G014840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7N2	5.8e-62	96.24	outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KCC7	7.1e-60	93.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1	[more]
A0A5D3BTY5	5.1e-58	82.05	Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1KKF2	3.4e-54	87.97	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1EQH2	2.9e-53	86.47	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of Lsi09G014840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458360.1	1.2e-61	96.24	PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo]	[more]
XP_038875334.1	2.7e-61	95.49	outer envelope pore protein 16-2, chloroplastic [Benincasa hispida]	[more]
XP_011657265.1	1.5e-59	93.23	outer envelope pore protein 16-2, chloroplastic [Cucumis sativus] >KAE8647078.1 ...	[more]
TYK02947.1	1.0e-57	82.05	outer envelope pore protein 16-2 [Cucumis melo var. makuwa]	[more]
XP_023514075.1	4.8e-55	88.72	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]

BLAST of Lsi09G014840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16160.1	1.3e-42	63.97	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	3.3e-41	63.04	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT2G28900.1	1.4e-12	41.86	outer plastid envelope protein 16-1	[more]
AT3G62880.1	9.9e-06	36.84	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	9.9e-06	36.84	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 95..201 e-value: 1.4E-13 score: 51.3
None	No IPR available	PANTHER	PTHR15371:SF1	OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC	coord: 77..211
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 77..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G014840.1	Lsi09G014840.1	mRNA