Lsi09G014800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G014800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L29
Location	chr09: 22860370 .. 22861587 (+)
RNA-Seq Expression	Lsi09G014800
Synteny	Lsi09G014800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCCATTCACTCTAACATGGTATCAAAGGTGGACAATTTCCCACCTAATTTCTCTTTAGAAGGAGTTATGGGCCCAAAGTCCAAGCCCATTAGAATTTGAAGGCAAGCCCAAAATAAGCTGCCCATAACTCCAAATTAGGTCAGAAACCCTAGCATTTCTTCAAATCCCTCTCCTCTTCCTATCGATTTCTTCAAATCCTTCTCTTTTCCGTATTCGCTTTTCCGTTCAGAGATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGGTATTTGTTTTACTCATACAATCACTTCTGTTCTTGTTCAATCCATTGTTTTCTTTTTTAATTGTTTTAATTCTTTGTCTCGTCGAATTGTGTATAGATGGATCCAAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAGCACAATAACAAGAGTGGGGAAAATGCTTCTGAGGAAGAGTAAAGTAGAACGCGCCAAGTTTAGGGTTTTTATGATTTAAGTTTTTCTCATATTGAATCTTTTGTTATCGCTCTTCTTTTTGTTCAGTAGTCTTCCTATTTTGACTCAATGTGGAAACCGTTACTCCTGATGCCTGTTTTATGACAATACATTAGATCTGATTTGCATTTTTAAGGCTTGAAGTATTGGTTATTTCTTCATACACAATCAATTTGGGCCATTGATATTCTCTTCACTCAGCAAAGACATTATCTTTGTTTTCGTGGTGGTTTTAATTACAAGTTTAGTTTCCTCACCTGTGTTTGTGCATTGGGTATGTGTGTATCTATTTGGTTATCAACTTTTTCAATCGAGTCTAATATGTATTTGACATGTTACAAATCGATACAAATTGAAAGGATCAAATAGATACAAACTTTGAAGTTTGAGAGACTATACTTGAAATTTAACCTAATGGTTTGAATGGTGTCAATCTTGCTGCAAAGCATTTGACTTGTGGATTTAGTTTAGATTTCTATGGTGTAATGGGATGAGTGCTTGATTTACTAGGCAACAAGCTAGACAAATTTGATTTGTACGGAGTGTTTGGGCCTCCAACTCCAAGTTTGGGGCCTCCAACTCCAAGTTTGGGGCTCCAATTGTAATAGTTGGTATTTTCGATTATTATAACTTACAATTAACTACTATATTACTATTTCAAATT

mRNA sequence

CTTCTCCATTCACTCTAACATGGTATCAAAGGTGGACAATTTCCCACCTAATTTCTCTTTAGAAGGAGTTATGGGCCCAAAGTCCAAGCCCATTAGAATTTGAAGGCAAGCCCAAAATAAGCTGCCCATAACTCCAAATTAGGTCAGAAACCCTAGCATTTCTTCAAATCCCTCTCCTCTTCCTATCGATTTCTTCAAATCCTTCTCTTTTCCGTATTCGCTTTTCCGTTCAGAGATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAGCACAATAACAAGAGTGGGGAAAATGCTTCTGAGGAAGAGTAAAGTAGAACGCGCCAAGTTTAGGGTTTTTATGATTTAAGTTTTTCTCATATTGAATCTTTTGTTATCGCTCTTCTTTTTGTTCAGTAGTCTTCCTATTTTGACTCAATGTGGAAACCGTTACTCCTGATGCCTGTTTTATGACAATACATTAGATCTGATTTGCATTTTTAAGGCTTGAAGTATTGGTTATTTCTTCATACACAATCAATTTGGGCCATTGATATTCTCTTCACTCAGCAAAGACATTATCTTTGTTTTCGTGGTGGTTTTAATTACAAGTTTAGTTTCCTCACCTGTGTTTGTGCATTGGGTATGTGTGTATCTATTTGGTTATCAACTTTTTCAATCGAGTCTAATATGTATTTGACATGTTACAAATCGATACAAATTGAAAGGATCAAATAGATACAAACTTTGAAGTTTGAGAGACTATACTTGAAATTTAACCTAATGGTTTGAATGGTGTCAATCTTGCTGCAAAGCATTTGACTTGTGGATTTAGTTTAGATTTCTATGGTGTAATGGGATGAGTGCTTGATTTACTAGGCAACAAGCTAGACAAATTTGATTTGTACGGAGTGTTTGGGCCTCCAACTCCAATTTGGGGCTCCAATTGTAATAGTTGGTATTTTCGATTATTATAACTTACAATTAACTACTATATTACTATTTCAAATT

Coding sequence (CDS)

ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAGCACAATAACAAGAGTGGGGAAAATGCTTCTGAGGAAGAGTAA

Protein sequence

MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEEE

Homology

[Close]

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-21
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-21
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 2.8e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL
Match: A0A6J1EUF7 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-22
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-22
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-22
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL
Match: A0A1S3C7P2 (60S ribosomal protein L29 OS=Cucumis melo OX=3656 GN=LOC103497798 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.4e-22
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENAS E
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. NCBI nr
Match: XP_038875270.1 (60S ribosomal protein L29-1 [Benincasa hispida])

HSP 1 Score: 117.9 bits (294), Expect = 3.2e-23
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida])

HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114.4 bits (285), Expect = 3.5e-22
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. NCBI nr
Match: XP_022930218.1 (60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.2 bits (282), Expect = 7.8e-22
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Lsi09G014800 vs. NCBI nr
Match: KAG7013674.1 (60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1   MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
           MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE  SEE
Sbjct: 58  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 117

Query: 61  E 62
           E
Sbjct: 118 E 118

[Close]

BLAST of Lsi09G014800 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 103.2 bits (256), Expect = 7.5e-23
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 103.2 bits (256), Expect = 7.5e-23
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 103.2 bits (256), Expect = 7.5e-23
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Lsi09G014800 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-22
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  E
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 82

Query: 61 E 62
          E
Sbjct: 83 E 83

[Close]

BLAST of Lsi09G014800 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-22
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Lsi09G014800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7X7	1.1e-21	86.89	60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1	[more]
Q84WM0	1.8e-21	86.89	60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2	[more]
Q58DW3	2.8e-14	76.92	60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3	[more]
P47914	2.8e-14	76.92	60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2	[more]
Q8HXB8	2.8e-14	76.92	60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3	[more]

BLAST of Lsi09G014800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHA4	1.7e-22	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1	[more]
A0A6J1EUF7	3.8e-22	96.67	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=...	[more]
A0A6J1L4P4	4.9e-22	95.08	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1	[more]
A0A6J1H4N3	4.9e-22	95.08	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=...	[more]
A0A1S3C7P2	6.4e-22	96.72	60S ribosomal protein L29 OS=Cucumis melo OX=3656 GN=LOC103497798 PE=3 SV=1	[more]

BLAST of Lsi09G014800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875270.1	3.2e-23	100.00	60S ribosomal protein L29-1 [Benincasa hispida]	[more]
XP_038875325.1	1.6e-22	98.36	60S ribosomal protein L29-1-like [Benincasa hispida]	[more]
XP_023000055.1	3.5e-22	96.72	60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal pro...	[more]
XP_022930218.1	7.8e-22	96.67	60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal pro...	[more]
KAG7013674.1	1.0e-21	95.08	60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Lsi09G014800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06700.1	7.5e-23	86.89	Ribosomal L29e protein family	[more]
AT3G06700.2	7.5e-23	86.89	Ribosomal L29e protein family	[more]
AT3G06700.3	7.5e-23	86.89	Ribosomal L29e protein family	[more]
AT3G06680.1	1.3e-22	86.89	Ribosomal L29e protein family	[more]
AT3G06680.2	1.3e-22	86.89	Ribosomal L29e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1730		coord: 1..61 e-value: 5.1E-30 score: 105.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR12884:SF30	60S RIBOSOMAL PROTEIN L29	coord: 1..61
IPR002673	Ribosomal protein L29e	PFAM	PF01779	Ribosomal_L29e	coord: 3..42 e-value: 3.5E-23 score: 81.6
IPR002673	Ribosomal protein L29e	PANTHER	PTHR12884	60S RIBOSOMAL PROTEIN L29	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G014800.1	Lsi09G014800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003735	structural constituent of ribosome