Lsi09G014760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G014760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Beta-D-xylosidase 1-like
Location	chr09: 22800506 .. 22801048 (-)
RNA-Seq Expression	Lsi09G014760
Synteny	Lsi09G014760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAACATGGGCCTACGACCTGACCCGTCAACCGGCTATCCAGGTCGGACCTACCGGTTCTACAAGGGCCCGGTCGTATTCCCATTCGGGTTCGGTTTAAGCTACACAGAATTCTCCCACTCCATAGCCGAAGCCCCAACAAAAATCTCGCTTCCTCTCTCAAGTCTCTCTCCAAATTCCTCCGCCGCTCTCACCGCAATCAAAGTCTCTCACACCGATTGCGCCTCCATCTCCGATCTCCCCCTTCAGATCGACGTCAAGAACTCCGGAACCGTCGATGGATCTCACACCATTCTCATCTTTGCAACCGCTCCGAACCCGATCTGGTCGCCGGAAAACCACTTGATCGGATTCGAAAAGGTTCATCTGATAGCCGGATCTCAGAAGCGAGTTCGAATCGGAATCCATGTTTGCGATCATCTCAGCCGAGTCGATCAGTTTGGAACTCGAAGAATTCCGACTGGTGAGCATAAACTCCATATTGGAGATCTTACTCATTCGATTTCACTTCACGCTGATTTACAAAATATTAAATTCTGA

mRNA sequence

ATGACAAACATGGGCCTACGACCTGACCCGTCAACCGGCTATCCAGGTCGGACCTACCGGTTCTACAAGGGCCCGGTCGTATTCCCATTCGGGTTCGGTTTAAGCTACACAGAATTCTCCCACTCCATAGCCGAAGCCCCAACAAAAATCTCGCTTCCTCTCTCAAGTCTCTCTCCAAATTCCTCCGCCGCTCTCACCGCAATCAAAGTCTCTCACACCGATTGCGCCTCCATCTCCGATCTCCCCCTTCAGATCGACGTCAAGAACTCCGGAACCGTCGATGGATCTCACACCATTCTCATCTTTGCAACCGCTCCGAACCCGATCTGGTCGCCGGAAAACCACTTGATCGGATTCGAAAAGGTTCATCTGATAGCCGGATCTCAGAAGCGAGTTCGAATCGGAATCCATGTTTGCGATCATCTCAGCCGAGTCGATCAGTTTGGAACTCGAAGAATTCCGACTGGTGAGCATAAACTCCATATTGGAGATCTTACTCATTCGATTTCACTTCACGCTGATTTACAAAATATTAAATTCTGA

Coding sequence (CDS)

ATGACAAACATGGGCCTACGACCTGACCCGTCAACCGGCTATCCAGGTCGGACCTACCGGTTCTACAAGGGCCCGGTCGTATTCCCATTCGGGTTCGGTTTAAGCTACACAGAATTCTCCCACTCCATAGCCGAAGCCCCAACAAAAATCTCGCTTCCTCTCTCAAGTCTCTCTCCAAATTCCTCCGCCGCTCTCACCGCAATCAAAGTCTCTCACACCGATTGCGCCTCCATCTCCGATCTCCCCCTTCAGATCGACGTCAAGAACTCCGGAACCGTCGATGGATCTCACACCATTCTCATCTTTGCAACCGCTCCGAACCCGATCTGGTCGCCGGAAAACCACTTGATCGGATTCGAAAAGGTTCATCTGATAGCCGGATCTCAGAAGCGAGTTCGAATCGGAATCCATGTTTGCGATCATCTCAGCCGAGTCGATCAGTTTGGAACTCGAAGAATTCCGACTGGTGAGCATAAACTCCATATTGGAGATCTTACTCATTCGATTTCACTTCACGCTGATTTACAAAATATTAAATTCTGA

Protein sequence

MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPNSSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF

Homology

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BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot
Match: P83344 (Putative beta-D-xylosidase (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-58
Identity = 102/181 (56.35%), Postives = 137/181 (75.69%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSL--S 60
           MT+M +R DP+ GYPGRTYRFY GPVVFPFG GLSYT F+H++A  PT +S+PL+SL  +
Sbjct: 280 MTDMAMRADPARGYPGRTYRFYIGPVVFPFGLGLSYTTFAHNLAHGPTLVSVPLTSLKAT 339

Query: 61  PNSSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIG 120
            NS+     ++VSH DC ++S L + +DVKN+G++DG+HT+L+F + P+  W+    L+G
Sbjct: 340 ANSTMLSKTVRVSHPDCNALSPLDVHVDVKNTGSMDGTHTLLVFTSPPDGKWASSKQLMG 399

Query: 121 FEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNI 180
           F K+H+  GS+KRVRI +HVC HLS VD+FG RRIP GEHKL IGDL+H +SL  +L  I
Sbjct: 400 FHKIHIATGSEKRVRIAVHVCKHLSVVDRFGIRRIPLGEHKLQIGDLSHHVSLQTNLGEI 459

[Close]

BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot
Match: Q9FGY1 (Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 95/182 (52.20%), Postives = 129/182 (70.88%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAP-TKISLPLSSL-S 60
           MT M +R   S  YPGRTYRFYKGPVVFPFGFGLSYT F+HS+A++P  ++S+ LS+L S
Sbjct: 595 MTVMAMR--ASGNYPGRTYRFYKGPVVFPFGFGLSYTTFTHSLAKSPLAQLSVSLSNLNS 654

Query: 61  PNS--SAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAP-NPI--WSPE 120
            N+  +++  +IKVSHT+C S   +PL ++V N+G  DG+HT+ +FA  P N I      
Sbjct: 655 ANTILNSSSHSIKVSHTNCNSFPKMPLHVEVSNTGEFDGTHTVFVFAEPPINGIKGLGVN 714

Query: 121 NHLIGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHA 176
             LI FEKVH++AG+++ V++ +  C HL  VD++G RRIP GEHKLHIGDL H+I +  
Sbjct: 715 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQP 774

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BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot
Match: Q94KD8 (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MT M +RP  S   PGRTYRFY GPVV+PFG GLSYT F+H+IA+AP  I  P++    N
Sbjct: 591 MTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVI--PIAVRGRN 650

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
            + +  +I+V+H  C  +S L + ++V N G+ DG+HT+L+F+  P   W+P+  L+ FE
Sbjct: 651 GTVSGKSIRVTHARCDRLS-LGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQLVAFE 710

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHA 174
           +VH+  G +KRV++ IHVC +LS VD+ G RRIP G+H +HIGD +H++SL A
Sbjct: 711 RVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSLQA 760

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BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot
Match: A5JTQ2 (Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 77/171 (45.03%), Postives = 111/171 (64.91%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNM +R DP+TGYPGRTYRFYKG  VF FG G+S+    H I +AP  +S+PL+     
Sbjct: 603 MTNMNMRADPATGYPGRTYRFYKGETVFSFGDGMSFGTVEHKIVKAPQLVSVPLAEDHEC 662

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
            S    ++ V+   C +++   + + VKN G +  SH++L+F T PN   +P+ HL+GFE
Sbjct: 663 RSLECKSLDVADKHCQNLA-FDIHLSVKNMGKMSSSHSVLLFFTPPNVHNAPQKHLLGFE 722

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISL 172
           KV L   S+  VR  + VC+ LS VD+ G R++P G+H LH+G+L HS+S+
Sbjct: 723 KVQLAGKSEGMVRFKVDVCNDLSVVDELGNRKVPLGDHMLHVGNLKHSLSV 772

[Close]

BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot
Match: A5JTQ3 (Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.4e-36
Identity = 72/171 (42.11%), Postives = 106/171 (61.99%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNM +RPDP+TGYPGRTYRFYKG  VF FG G+SY+ F H + +AP  +S+PL+     
Sbjct: 603 MTNMNMRPDPATGYPGRTYRFYKGETVFSFGDGISYSTFEHKLVKAPQLVSVPLAEDHVC 662

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
            S+   ++ V    C +++   + + +KN G +  S T+ +F+T P    +P+ HL+ FE
Sbjct: 663 RSSKCKSLDVVGEHCQNLA-FDIHLRIKNKGKMSSSQTVFLFSTPPAVHNAPQKHLLAFE 722

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISL 172
           KV L   S+  V   + VC  L  VD+ G R++  G+H LH+GDL H +S+
Sbjct: 723 KVLLTGKSEALVSFKVDVCKDLGLVDELGNRKVALGKHMLHVGDLKHPLSV 772

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BLAST of Lsi09G014760 vs. ExPASy TrEMBL
Match: A0A5D3BVV3 (Beta-D-xylosidase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00220 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 164/180 (91.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPTKISLPLSSLSPN
Sbjct: 449 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTKISLPLSSLSPN 508

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           SSA   A+KVSHTDCAS+SDLP+Q+DVKN+GTVDGSHTIL+F+TAPNPIWSPE HLIGFE
Sbjct: 509 SSA---AVKVSHTDCASVSDLPIQVDVKNTGTVDGSHTILVFSTAPNPIWSPEKHLIGFE 568

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGSQKRVRIGIHVCDHLSRVD+FGTRRIPTGEHKLHIGDLTHSISLHADLQ+IKF
Sbjct: 569 KVHLMAGSQKRVRIGIHVCDHLSRVDEFGTRRIPTGEHKLHIGDLTHSISLHADLQDIKF 625

[Close]

BLAST of Lsi09G014760 vs. ExPASy TrEMBL
Match: A0A1S3C788 (LOW QUALITY PROTEIN: beta-D-xylosidase 1-like OS=Cucumis melo OX=3656 GN=LOC103497802 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 162/180 (90.00%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPTKISLPLSSLSP 
Sbjct: 591 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTKISLPLSSLSPX 650

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           +S+A  A+KVSHTDCAS+SDLP+Q+DVKN+GTVDGSHTIL+F+TAPNPIWSPE HLIGFE
Sbjct: 651 NSSA--AVKVSHTDCASVSDLPIQVDVKNTGTVDGSHTILVFSTAPNPIWSPEKHLIGFE 710

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGSQKRVRIGIHVCDHLSRVD+FGTRRIPTGEHKLHIGDLTHSISLHADLQ+IKF
Sbjct: 711 KVHLMAGSQKRVRIGIHVCDHLSRVDEFGTRRIPTGEHKLHIGDLTHSISLHADLQDIKF 768

[Close]

BLAST of Lsi09G014760 vs. ExPASy TrEMBL
Match: A0A0A0KHZ3 (Fn3_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G309980 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.4e-86
Identity = 157/180 (87.22%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FS S AEAPTKISLPLSSLSPN
Sbjct: 594 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSQSFAEAPTKISLPLSSLSPN 653

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           SSA    +KVSHTDCAS+SDLP+ IDVKN+GTVDGSHTIL+F+T PN  WSPE HLIGFE
Sbjct: 654 SSA---TVKVSHTDCASVSDLPIMIDVKNTGTVDGSHTILVFSTVPNQTWSPEKHLIGFE 713

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHLIAGSQKRVRIGIHVCDHLSRVD+FGTRRIP GEHKLHIGDLTHSISL ADLQ+IKF
Sbjct: 714 KVHLIAGSQKRVRIGIHVCDHLSRVDEFGTRRIPMGEHKLHIGDLTHSISLQADLQDIKF 770

[Close]

BLAST of Lsi09G014760 vs. ExPASy TrEMBL
Match: A0A6J1L226 (beta-D-xylosidase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499141 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 149/180 (82.78%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPT+IS+PLS+ SPN
Sbjct: 592 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTRISIPLSNFSPN 651

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           S+++  AIKV H DCA+ISDL LQIDVKN+GT DGSHTIL+FA+A N IWSPE HLIGFE
Sbjct: 652 STSSFDAIKVLHIDCAAISDLGLQIDVKNTGTADGSHTILVFASASNEIWSPEKHLIGFE 711

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGS +RVRIGI VCDHLSRVD+FGTRRIPTG+HKLHIGDL H ISLHADL+NIKF
Sbjct: 712 KVHLMAGSLQRVRIGIRVCDHLSRVDRFGTRRIPTGKHKLHIGDLNHLISLHADLKNIKF 771

[Close]

BLAST of Lsi09G014760 vs. ExPASy TrEMBL
Match: A0A6J1KLG5 (beta-D-xylosidase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494355 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 151/182 (82.97%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLS-- 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFG+GLSY++F+HSIAEAP ++ +PL++LS  
Sbjct: 600 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGYGLSYSKFTHSIAEAPKELPIPLTNLSPN 659

Query: 61  PNSSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIG 120
           PNS+A+L AIKVSHTDCASISDL LQIDVKN GT+DGSHT+L+FATAPN   SP  HLIG
Sbjct: 660 PNSTASLNAIKVSHTDCASISDLGLQIDVKNVGTLDGSHTVLVFATAPNENSSPYKHLIG 719

Query: 121 FEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNI 180
           FEKVH+ AGSQKRVRIG+HVCDHLSRVDQFGTRRIPTGEH LHIGDLTH+ISLHADLQNI
Sbjct: 720 FEKVHMTAGSQKRVRIGVHVCDHLSRVDQFGTRRIPTGEHTLHIGDLTHTISLHADLQNI 779

[Close]

BLAST of Lsi09G014760 vs. NCBI nr
Match: TYK02942.1 (beta-D-xylosidase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 345.1 bits (884), Expect = 3.6e-91
Identity = 164/180 (91.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPTKISLPLSSLSPN
Sbjct: 449 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTKISLPLSSLSPN 508

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           SSA   A+KVSHTDCAS+SDLP+Q+DVKN+GTVDGSHTIL+F+TAPNPIWSPE HLIGFE
Sbjct: 509 SSA---AVKVSHTDCASVSDLPIQVDVKNTGTVDGSHTILVFSTAPNPIWSPEKHLIGFE 568

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGSQKRVRIGIHVCDHLSRVD+FGTRRIPTGEHKLHIGDLTHSISLHADLQ+IKF
Sbjct: 569 KVHLMAGSQKRVRIGIHVCDHLSRVDEFGTRRIPTGEHKLHIGDLTHSISLHADLQDIKF 625

[Close]

BLAST of Lsi09G014760 vs. NCBI nr
Match: XP_008458374.2 (PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 1-like [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90
Identity = 162/180 (90.00%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPTKISLPLSSLSP 
Sbjct: 591 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTKISLPLSSLSPX 650

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           +S+A  A+KVSHTDCAS+SDLP+Q+DVKN+GTVDGSHTIL+F+TAPNPIWSPE HLIGFE
Sbjct: 651 NSSA--AVKVSHTDCASVSDLPIQVDVKNTGTVDGSHTILVFSTAPNPIWSPEKHLIGFE 710

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGSQKRVRIGIHVCDHLSRVD+FGTRRIPTGEHKLHIGDLTHSISLHADLQ+IKF
Sbjct: 711 KVHLMAGSQKRVRIGIHVCDHLSRVDEFGTRRIPTGEHKLHIGDLTHSISLHADLQDIKF 768

[Close]

BLAST of Lsi09G014760 vs. NCBI nr
Match: XP_038874742.1 (LOW QUALITY PROTEIN: putative beta-D-xylosidase [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 3.4e-89
Identity = 161/180 (89.44%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FSHSIAEAPTK+S+PLS+L PN
Sbjct: 600 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSHSIAEAPTKVSVPLSNLFPN 659

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           SSAA TAIKVSH DCASISDLPL IDVKN+GTVDGSHTIL+FATAPN  WSPE HLIGFE
Sbjct: 660 SSAAFTAIKVSHIDCASISDLPLHIDVKNTGTVDGSHTILVFATAPNQTWSPEKHLIGFE 719

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHL+AGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLH DL++I F
Sbjct: 720 KVHLMAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHIDLKDINF 779

[Close]

BLAST of Lsi09G014760 vs. NCBI nr
Match: XP_004151112.1 (beta-D-xylosidase 1 [Cucumis sativus] >KGN47391.1 hypothetical protein Csa_022937 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 157/180 (87.22%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSY++FS S AEAPTKISLPLSSLSPN
Sbjct: 594 MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYSKFSQSFAEAPTKISLPLSSLSPN 653

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           SSA    +KVSHTDCAS+SDLP+ IDVKN+GTVDGSHTIL+F+T PN  WSPE HLIGFE
Sbjct: 654 SSA---TVKVSHTDCASVSDLPIMIDVKNTGTVDGSHTILVFSTVPNQTWSPEKHLIGFE 713

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           KVHLIAGSQKRVRIGIHVCDHLSRVD+FGTRRIP GEHKLHIGDLTHSISL ADLQ+IKF
Sbjct: 714 KVHLIAGSQKRVRIGIHVCDHLSRVDEFGTRRIPMGEHKLHIGDLTHSISLQADLQDIKF 770

[Close]

BLAST of Lsi09G014760 vs. NCBI nr
Match: KAG7013671.1 (Beta-D-xylosidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 153/180 (85.00%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNMGLRPDPSTGYPGRTYRFYKGPV+FPFGFGLSY++FSHSIAEAPT+IS+PLS+ SPN
Sbjct: 593 MTNMGLRPDPSTGYPGRTYRFYKGPVIFPFGFGLSYSKFSHSIAEAPTRISIPLSNFSPN 652

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
           S+++  AIKVSHTDCA+ISDL LQIDVKN+GT DGSHTIL+FA+APN IWSPE HLIGFE
Sbjct: 653 STSSFDAIKVSHTDCAAISDLGLQIDVKNTGTADGSHTILVFASAPNEIWSPEKHLIGFE 712

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHADLQNIKF 180
           K HL+AGS +RVRIGI VCDHLSRVDQFGTRRIPTGEHKLHIGDLTH ISLHADL+NIKF
Sbjct: 713 KFHLMAGSLQRVRIGIRVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHLISLHADLKNIKF 772

[Close]

BLAST of Lsi09G014760 vs. TAIR 10
Match: AT1G02640.1 (beta-xylosidase 2 )

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-45
Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MT M +RP  S   PGRTYRFY GPVV+PFG GLSYT F+H+IA+AP  I  P++    N
Sbjct: 591 MTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVI--PIAVRGRN 650

Query: 61  SSAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHLIGFE 120
            + +  +I+V+H  C  +S L + ++V N G+ DG+HT+L+F+  P   W+P+  L+ FE
Sbjct: 651 GTVSGKSIRVTHARCDRLS-LGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQLVAFE 710

Query: 121 KVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHA 174
           +VH+  G +KRV++ IHVC +LS VD+ G RRIP G+H +HIGD +H++SL A
Sbjct: 711 RVHVAVGEKKRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSLQA 760

[Close]

BLAST of Lsi09G014760 vs. TAIR 10
Match: AT5G49360.1 (beta-xylosidase 1 )

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-45
Identity = 95/182 (52.20%), Postives = 129/182 (70.88%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAP-TKISLPLSSL-S 60
           MT M +R   S  YPGRTYRFYKGPVVFPFGFGLSYT F+HS+A++P  ++S+ LS+L S
Sbjct: 595 MTVMAMR--ASGNYPGRTYRFYKGPVVFPFGFGLSYTTFTHSLAKSPLAQLSVSLSNLNS 654

Query: 61  PNS--SAALTAIKVSHTDCASISDLPLQIDVKNSGTVDGSHTILIFATAP-NPI--WSPE 120
            N+  +++  +IKVSHT+C S   +PL ++V N+G  DG+HT+ +FA  P N I      
Sbjct: 655 ANTILNSSSHSIKVSHTNCNSFPKMPLHVEVSNTGEFDGTHTVFVFAEPPINGIKGLGVN 714

Query: 121 NHLIGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISLHA 176
             LI FEKVH++AG+++ V++ +  C HL  VD++G RRIP GEHKLHIGDL H+I +  
Sbjct: 715 KQLIAFEKVHVMAGAKQTVQVDVDACKHLGVVDEYGKRRIPMGEHKLHIGDLKHTILVQP 774

[Close]

BLAST of Lsi09G014760 vs. TAIR 10
Match: AT5G64570.1 (beta-D-xylosidase 4 )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 75/176 (42.61%), Postives = 105/176 (59.66%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MT M +RPD ++GYPGRTYRFY G  V+ FG GLSYT+FSH++ +AP+ +SL L      
Sbjct: 607 MTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGLEENHVC 666

Query: 61  SSAALTAIKVSHTDCASI-----SDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENH 120
            S+   ++      C +      S   + I V+N G  +G HT+ +F T P    SP  H
Sbjct: 667 RSSECQSLDAIGPHCENAVSGGGSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKH 726

Query: 121 LIGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISL 172
           L+GFEK+ L    +  VR  + +C  LS VD+ G R+I  G+H LH+GDL HS+S+
Sbjct: 727 LVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSI 782

[Close]

BLAST of Lsi09G014760 vs. TAIR 10
Match: AT5G09730.1 (beta-xylosidase 3 )

HSP 1 Score: 145.2 bits (365), Expect = 5.1e-35
Identity = 72/175 (41.14%), Postives = 103/175 (58.86%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           M+NM +RPD S GYPGR+YRFY G  V+ F   L+YT+F H + +AP  +SL L    P 
Sbjct: 597 MSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSLDENHPC 656

Query: 61  SSAALTAIKVSHTDCASI----SDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHL 120
            S+   ++      C +     SD  + ++VKN+G   GSHT+ +F T+P    SP   L
Sbjct: 657 RSSECQSLDAIGPHCENAVEGGSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQL 716

Query: 121 IGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISL 172
           +GFEK+ L    +  VR  ++VC  LS VD+ G R+I  G H LH+G L HS+++
Sbjct: 717 LGFEKIRLGKSEEAVVRFNVNVCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNI 771

[Close]

BLAST of Lsi09G014760 vs. TAIR 10
Match: AT5G09700.1 (Glycosyl hydrolase family protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33
Identity = 72/175 (41.14%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MTNMGLRPDPSTGYPGRTYRFYKGPVVFPFGFGLSYTEFSHSIAEAPTKISLPLSSLSPN 60
           MTNM +RPD S GY GRTYRFY G  V+ FG GLSYT FSH + +AP  +SL L      
Sbjct: 350 MTNMNMRPDKSNGYLGRTYRFYIGETVYAFGDGLSYTNFSHQLIKAPKFVSLNLDESQSC 409

Query: 61  SSAALTAIKVSHTDCASI----SDLPLQIDVKNSGTVDGSHTILIFATAPNPIWSPENHL 120
            S    ++      C       SD  +Q+ V+N G  +G+ T+ +F T P    SP   L
Sbjct: 410 RSPECQSLDAIGPHCEKAVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQL 469

Query: 121 IGFEKVHLIAGSQKRVRIGIHVCDHLSRVDQFGTRRIPTGEHKLHIGDLTHSISL 172
           +GFEK+ L    +  VR  + VC  L  VD+ G R++  G H LH+G L HS ++
Sbjct: 470 LGFEKIRLGKKEETVVRFKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNI 524

The following BLAST results are available for this feature:

BLAST of Lsi09G014760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P83344	4.2e-58	56.35	Putative beta-D-xylosidase (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1	[more]
Q9FGY1	2.6e-44	52.20	Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1	[more]
Q94KD8	2.6e-44	49.13	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1	[more]
A5JTQ2	2.5e-39	45.03	Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subs...	[more]
A5JTQ3	3.4e-36	42.11	Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX...	[more]

BLAST of Lsi09G014760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVV3	1.7e-91	91.11	Beta-D-xylosidase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C788	1.5e-90	90.00	LOW QUALITY PROTEIN: beta-D-xylosidase 1-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KHZ3	6.4e-86	87.22	Fn3_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G309980 PE...	[more]
A0A6J1L226	1.9e-82	82.78	beta-D-xylosidase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499141 PE=3 SV=1	[more]
A0A6J1KLG5	1.9e-82	82.97	beta-D-xylosidase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494355 PE=3 SV=1	[more]

BLAST of Lsi09G014760 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02942.1	3.6e-91	91.11	beta-D-xylosidase 1-like [Cucumis melo var. makuwa]	[more]
XP_008458374.2	3.0e-90	90.00	PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 1-like [Cucumis melo]	[more]
XP_038874742.1	3.4e-89	89.44	LOW QUALITY PROTEIN: putative beta-D-xylosidase [Benincasa hispida]	[more]
XP_004151112.1	1.3e-85	87.22	beta-D-xylosidase 1 [Cucumis sativus] >KGN47391.1 hypothetical protein Csa_02293...	[more]
KAG7013671.1	2.9e-85	85.00	Beta-D-xylosidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi09G014760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02640.1	1.9e-45	49.13	beta-xylosidase 2	[more]
AT5G49360.1	1.9e-45	52.20	beta-xylosidase 1	[more]
AT5G64570.1	6.0e-36	42.61	beta-D-xylosidase 4	[more]
AT5G09730.1	5.1e-35	41.14	beta-xylosidase 3	[more]
AT5G09700.1	4.7e-33	41.14	Glycosyl hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026891	Fibronectin type III-like domain	SMART	SM01217	Fn3_like_2	coord: 97..166 e-value: 1.1E-10 score: 51.5
IPR026891	Fibronectin type III-like domain	PFAM	PF14310	Fn3-like	coord: 99..164 e-value: 2.1E-10 score: 40.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 36..179 e-value: 4.2E-15 score: 57.9
None	No IPR available	PANTHER	PTHR42721:SF8	BETA-D-XYLOSIDASE 1	coord: 1..176
IPR044993	Beta-D-xylosidase	PANTHER	PTHR42721	SUGAR HYDROLASE-RELATED	coord: 1..176
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily	SUPERFAMILY	52279	Beta-D-glucan exohydrolase, C-terminal domain	coord: 13..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G014760.1	Lsi09G014760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031222	arabinan catabolic process
biological_process	GO:0045493	xylan catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046556	alpha-L-arabinofuranosidase activity
molecular_function	GO:0009044	xylan 1,4-beta-xylosidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds