Lsi09G014530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G014530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	multiple organellar RNA editing factor 3, mitochondrial-like
Location	chr09: 22497164 .. 22503866 (+)
RNA-Seq Expression	Lsi09G014530
Synteny	Lsi09G014530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACTTAACTGCAAGTCTTCAATAGAAATAAATAGAAATATGGGTACTTAACTGCAAAATATATATATATGTATGAAGCTGTAGCTATAGTTTGGTTATTTGTATGCATGTTGAACTACTGGTAATTATGAAATCTTTATCTCCTTCTCTCTCTAAAAATATATAAAGTATAGTAATTTAATCATCAAGAATATGTGTTGATAATATATATTTATATAATTTATTTAAGTTTGATGAAAAAAAAAAACAAATTGAAAAAACCACCACTTCAATTATGGTGATATTTGCAATTCAAACTTTTAATCATAAAAATTGAGCTCTCAAAATTATACATAGGTTAAGATTAAAAATTAAACCAACACTACTTCCACCTCCAGATTTCTTCCTTTGTAGTTAGTTTTTATTAAAAAACCAAATTAAAATTTGAAAACTAATATTTTTTTGTTTTTGGAATTTGGGTAAAAATTTAACCATTGAACTTAAGAAAGATGCAAATCATTGTAAGAAATGTGGAGAAGATATAATTAATTTTTAAAAACCAAAAATAAAAAATGAAATGGGATACCAAACGGGGTCTTAATAATTAAATTTGAACCAGGTATAGAATTGTTGAAATTGGACCGTAAACTTGCAAATTTAATTTGGTCAAACATTTAATTTCTAAAATTAAATTTGATTCATTTTAATTATTATACTTTACTGTTACATTTTAAGAAATTTAGTGCTTTCGTGGTAAAATTTTGATCGAAAATGAACATAAAAAAATAAAACGCACTATATTTAAAAAGTACGAAGACTAAAATAAGCATGAACTAAAAATAAACAAAAGTTTTTAGTATATAGATAAAAATGAATTTTTGAAAGTATTGGAATTAAAATAAAAGCCTTTTCTTAAAAAAAATTTAATTTAAAACTAACTAAAGAAAGTATGGAAACAAAAATTATATTTTAAAATAATATTTAAAAAATAGTATAATTTAAGGGAAATTTTCACCGATAGAAAAAATTTCAAACTATTTACAGAAAATAGCAAAAAAACACTGATAGACATTGATAGACTTCTATTAGCATCTATCAGTGATAGACTTCTATCGTTTCTATTACTGATAGACCGTGATAGATTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTAAATTTTTTTCCTTCTTTTTCTATTTTTAAAAATCCCCCGTAATTTAACTTTTTTTTCTTTTTTAAAAACTACTTTTTCTTTTATTATTTTAAACTAATTTTAGGATGGTTCTTTTTTAGTTCTATCCTTACAACCATTTTAAGAAGCAAATTAATTCAGAATTTTTAAATATACATTTTCAAATCTCATGAAAAACTTACCAAATCTACAAAAATTTCAGTTTTTCCCCATTGTGCATGTGTTTCACTATTTTAAATTCAATTAATTAAATGTGTGTACGACCCCAAAAATAAATTAGAAACCGTTAAAAGTTATGACATGATATGTTTATTGATTTCCAGTGAAAACTATTGAAGTCACTGTTTGGTTTAAAAAATAAAGAACAAAAAGATAATTTATTCGACTTTTAGAAAGGAAGATCATATGATTAATTACCGTTGAGCTAAGTTCGCTTTGACAGAAAGAGTTATTATTAATCTTATTTATTATTTACCTCCAATAAATTTGGTATTCGAAGTATACTTTAACACAATTTCCTTCTTAACTTTTTGAATGTTGTCATTGAGAAGTATTACTTGAGAGTTGAAACTTTGATCATAAACTTGGAAAAATTGTCTTTATTTATTGTCATGTGAATTAATATTGCAATCACTATCCAAGTACTAAAGATTCACCTTGATAGAAGTTACAAGAAAATAGGTGCCCTCCTTCATCTTCTTTGTTTATTTTGCTTTACTTTTTTGTTTTTCATTTTTTAAACCAACTATTTTTTTTTAATGATTTGGTATCCAAGATTTAGTTTGTATAAATTTACTTATTCAATTCCTAGAATCTCACTCAAATAGAATTATACAAAACTAAGGATATATGAATATAACTTTTCAGAAAAAAAAAAAAAGAAGGAATATATGAATATAAGTATAACCTATTTAAGTATAATTCCAATTATTTGGGGGGGGGGGGGGTCTTTTAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGATCTTTTAATATATTGTATATTTTAATTAAGGCCCGTTCGAGAACTTCTCACGTGAGAGAGAGAGAAAAAAAATCAAATATGAGGAACAAATATTTTAAGAGGAAAACATGATCCAATGTTTTCAAAGTGAGTTTAGTTCAACGATAATTGAGTTAGCGGAAAAAAATCTCATAATAAAAGATATTGGAGAATTTCATCCCACAGTAAAAAAAACCAACAAAAGACAAACTCTAGAGGCCAGAACAAACAAGATCGTGAAAGAGTGCATGCTTAGATTGAAAGAAAAAATAAAGCGCCTTTCAATCTTGAAAATTTGTTACGAGATAAATTTTATTTCCAACTTGAAATTTCTTAATGTTACATTGAAAATTGGTAACGAGTTTATTTAAATCTCATGTAATTATTAATAACTAACTAAATCATGCATGACATAATTATTTTATATTATAATCTTTGGTTTTCTTTGTAAAAATTGTGTACTCTAGAAAATAGTACTCCCAAGTTAGAACTTTAAGTGTTCAACTAACAACTTAAAAGTTGAACCACGGATTTTAACTTGAGAGTGTGGGCTAATGTTGTAAGTGAGATTGACCTGACAAATAAGCCAAAAATCTGAAAAAGATAAGTGAAGATAAATACAAAGATAATGATAAAGTGAATTTGAGTTCAAATAAATCCAAGTGTTAACTAACTTATTTATCATCTAAACCTAACTTATGTGGGATAGAGAAAAAAACTATCTCATCCAATCCTAATAGAAAAAAGTAAATTTCATCTCATTCTCCTTATAAACACATAAATTCATATGAGGTAACTTAAACACTTACTTCTGACTTATTTGTCATTTTATAGTTTTTCATTTTTTACTTTGGCATCAAAGTCATTTTTGTTTGATAAATTTATAGTAAGGTAAGGTGCATTTTTTTCTGTCTAAATAATAATGTCATTTTTTACTGCTAATAACGATTTGAAACAAAAAAAAAATGGAATTCTAATATTGACAGTCGATCTGAAACAAAAAGAAAAAAGAGGAGAGATCTTTATAATCTAATATTGATGTAATAATTATTTTAATAAAATTTAAAACTGATGGGTAGTAAAAAGTTATTTCTTTTTCACGTAAGCGCGGTTACCTGAAACTGACCGGACAACGCGCGAGTGTGGTGAAAGGACCCTTTTACCACCACTATACTTTGGAAGCTCCCTTGCACCCACTTGGCAATCCTTAATCTTCCAATGTTGGATACCTTCTACTTCTTTTCTCATAAAATTATCTTTTTCCTTTTTGCTATAGGCCAAAAGCCTAAAGTCATTCCCAACCTATAGTATATAGTAAAGTATTTTCAGTATATATTATATATTATATACTATCATGTCAATATTTGACGGTGTGTATATATGATATAGGAAAATAATTTGTGTTAAATTATTAGGACAAAGTGAATTGAGAAGTAGTTGTAAAAGGATATTAAATTCAACGACTAGACAAAGACTCAAGAAAGGGTAGACGACAATCAAATTAGTAGCATCAAACTTAGTCGTGCATCCATATATATGCTATATATCCATAATCATGTAATTTATCTCACATATACTTCTTTTCAAAATAATACTAATAATAATAATCTCACATATACTTAGGTATATAGTAATTACATGAGAATATGGTATACATAATGATAATAAATGAATGTAAAGTCTGTGGAATTTCAATCAAATCAGTAGCGTGAAACTTACCAATTAATTTTAATTAATACAATAAAAAATAAGATTGAACGACGTCGGATATTGATTTGAATTTGGATAGACAACTCTAAAATAAACAAAATACAAAAAAAAATGGAAGAAACAAAATAGAGACATGACAAATTAGTGTATAAAAAGAAAAAAAAACATTGTTGCGAGAGAGATTTAACTCCATGCAAAATAAATTACTGTGAAAGTCAAATATAGATTTTAGATTACATTATCATTTAAATTCATTCTCGAGCTTCAAATTGGTCCAATTTATGAAAAAATTCATAAATTATGTTTTTGTAATATTGTATTTTTGGCTAAATTTCTCAAAAAAAAAAAGGATTTTAACCACTACCCTCATTTTCAATTTTGAGTGTTGACCACCAAGGGCCAAGATGGATTAAACGACGACGTATGGTTTACCGTGCTTCATTTTCCCAAACCTCCCTAAAATCCCAATGCACCAAAAACCTACAGCATCATTCCGCCACCTTCAAGCTTTCAACAATGGCGTCCTCAGCCACTCGGCGCACGTTATTCACTGTTCTTAGCCGAAGCCTCTCTTCTTCATCTCCATCTTCTTCTTCCCTCTTACTTCCATCTTCTATTTCTTCCCGCCTCCGATTCGCTTTTCCTCTGCTCAACAGACAGGATCAAATAATCCCTAATTCATTCAATCACCCAATTCGTTTCAAGTCTTCTGGATCCGGATACTCTCCACTTAACGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGCGATTACGAGCACTGGCTGATCGTGATGGAGTTTCCAAATGACGCGAAACCATCGGATGAGGAGATGGTGAATTCTTATGTCAAAACTCTAGCCGCTGTTGTTGGAAGGTATCGGATTGAAAACAAATTAGTATACACGGATTATCTTCTTTAGTTATTTTAGGGTTTTTTGTTTTTTTTTTCTTCTGATTTTCAGTGAGGAAGAGGCGAAGAAGAAAATATACTCAGTCAGTACAACTACGTATACTGGATTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGGTAATAGTTTCTGTGCTTATTCGTGTTATGATTAGATTAAGGAACCTTGGGAATCTGATTTATTCGTCTTGAAGATATTGGAATTGAAGATTGAAAGTGTAGTTTAATGTGTTTGATGAAAGTTCCCCAAATAAGATAAAGGGTTCGTTTCGATAACCATTTGGTTTTTGAAAATTATGTGTGTTTTCCTACCATTTCTTTACCATGGTTAACATTTGAATTTGAATTTCCAGCCACATTCTAAAATGAAGAACAAGTCTTTTAAGAAACTTCCTTAATTAGTTACCAAAACTATGTATTTTGAAAACACTACTAAAAAGTAGATAATAAACAAAGAAACCAATAATTGGAGGTAGTGTTTATAAGCTTCATTTTCAAAACCCAAATACAGCATAAGAAATTTTCCTTTCTATTTTGAAGTTTGCTGTAGAATTGACTTGAGTTTTAGTTTGATAATATGTGTGTTACCACCATGAAGGTTTGACATTTGTATTATATTGTGATCGTTTGTATTTAGATTTTGTAAAGAATAATCTTAAGGAGCCTTTTGTAAATTACAAGACTAAGGAGCCTTTTGTAAATTACAAGATTAAGGAGCCTTGTGAATCGGACTTTCTCATCTTGTAGATATTGGAAATCTGTCAAGTGTTTTGATTAAAATTGAAGATTGAAAGAGTACTTTTTTAGCTCAAGCACACAATGAGTTTGATGAAACTTCCCAGATAATGTTCGAATGGTTTAGGATTTTTCCTTTCTAGTTTCAAGTTTTTTTTTTCAGAATCAACTCGATTTTAGTTTGATTCTTTTTGTGTTACAAAAAGGTTTGACATTTGTGTTTATTTGTGATAATTTCGATTTAGCTTATGTAAAGAATAAAATTGGCATCTGACATGAGCTTTTCATTCCGGATGAAACAGAATTGCCAGGTGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTACGGAGGTGATCGCACTTCTTACTCTATCAAATTGATATAAATGCCCATTTTGCTTTAATGAATCATTCATGTTAATTTCAGGTGACCTGTTTATTGATGGAAAGGTCATCCCAAGACCGCAGTATAGGTACAACGACAGGCAACAATCTGTTAGAAACAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGAACACAACCGTTTCAGAGACAAAACTGGGGTCAAGACCAGAGAGATCCAGTGCAACCACCACCCTCCATGGAT

mRNA sequence

ATGGGGCCAAGATGGATTAAACGACGACGTATGGTTTACCGTGCTTCATTTTCCCAAACCTCCCTAAAATCCCAATGCACCAAAAACCTACAGCATCATTCCGCCACCTTCAAGCTTTCAACAATGGCGTCCTCAGCCACTCGGCGCACGTTATTCACTGTTCTTAGCCGAAGCCTCTCTTCTTCATCTCCATCTTCTTCTTCCCTCTTACTTCCATCTTCTATTTCTTCCCGCCTCCGATTCGCTTTTCCTCTGCTCAACAGACAGGATCAAATAATCCCTAATTCATTCAATCACCCAATTCGTTTCAAGTCTTCTGGATCCGGATACTCTCCACTTAACGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGCGATTACGAGCACTGGCTGATCGTGATGGAGTTTCCAAATGACGCGAAACCATCGGATGAGGAGATGGTGAATTCTTATGTCAAAACTCTAGCCGCTGTTGTTGGAAGTGAGGAAGAGGCGAAGAAGAAAATATACTCAGTCAGTACAACTACGTATACTGGATTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGAATTGCCAGGTGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTACGGAGGTGACCTGTTTATTGATGGAAAGGTCATCCCAAGACCGCAGTATAGGTACAACGACAGGCAACAATCTGTTAGAAACAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGAACACAACCGTTTCAGAGACAAAACTGGGGTCAAGACCAGAGAGATCCAGTGCAACCACCACCCTCCATGGAT

Coding sequence (CDS)

ATGGGGCCAAGATGGATTAAACGACGACGTATGGTTTACCGTGCTTCATTTTCCCAAACCTCCCTAAAATCCCAATGCACCAAAAACCTACAGCATCATTCCGCCACCTTCAAGCTTTCAACAATGGCGTCCTCAGCCACTCGGCGCACGTTATTCACTGTTCTTAGCCGAAGCCTCTCTTCTTCATCTCCATCTTCTTCTTCCCTCTTACTTCCATCTTCTATTTCTTCCCGCCTCCGATTCGCTTTTCCTCTGCTCAACAGACAGGATCAAATAATCCCTAATTCATTCAATCACCCAATTCGTTTCAAGTCTTCTGGATCCGGATACTCTCCACTTAACGATCCTTCTCCTAATTGGAGCAATCGACCTCCAAAAGAGACGATACTCCTCGATGGCTGCGATTACGAGCACTGGCTGATCGTGATGGAGTTTCCAAATGACGCGAAACCATCGGATGAGGAGATGGTGAATTCTTATGTCAAAACTCTAGCCGCTGTTGTTGGAAGTGAGGAAGAGGCGAAGAAGAAAATATACTCAGTCAGTACAACTACGTATACTGGATTTGGTGCCTTGATTTCGGAAGAGCTTTCTTACAAAGTGAAAGAATTGCCAGGTGTTCTATGGGTTTTACCAGATTCATATCTTGATGTTCCAAACAAAGATTACGGAGGTGACCTGTTTATTGATGGAAAGGTCATCCCAAGACCGCAGTATAGGTACAACGACAGGCAACAATCTGTTAGAAACAGGCCTCGTCCACGGTACGATAGACGCCGAGAAACTATGCAAGTTGAACGAACACAACCGTTTCAGAGACAAAACTGGGGTCAAGACCAGAGAGATCCAGTGCAACCACCACCCTCCATGGAT

Protein sequence

MGPRWIKRRRMVYRASFSQTSLKSQCTKNLQHHSATFKLSTMASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQRDPVQPPPSMD

Homology

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BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-81
Identity = 164/231 (71.00%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNR--QDQIIPNSFNH 101
           MA  +TRRTL T+L+++LSSS+  SSS     ++SSR RFA PL+ +    +        
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSF---PTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 102 PIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNS 161
             R K+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  D KP++EEM+NS
Sbjct: 61  STRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINS 120

Query: 162 YVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVP 221
           YVKTL +V+G EEEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVP
Sbjct: 121 YVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVP 180

Query: 222 NKDYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQP 271
           NKDYGGDL+++GKVIPRPQYR+ + Q+  R RPRPRYDRRRETMQVER +P
Sbjct: 181 NKDYGGDLYVEGKVIPRPQYRFTE-QRHTRPRPRPRYDRRRETMQVERREP 226

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BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-47
Identity = 121/259 (46.72%), Postives = 164/259 (63.32%), Query Frame = 0


Query: 35  ATFKLSTMASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIP 94
           AT  +S        ++L  + +RS +SS+P     L  S  SS L  + PL+     +  
Sbjct: 2   ATHTISRSILCRPAKSLSFLFTRSFASSAP-----LAKSPASSLLSRSRPLVAAFSSVFR 61

Query: 95  NSFNHPIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDE 154
                 ++  S+ +  S LNDP+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +
Sbjct: 62  GGL-VSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRD 121

Query: 155 EMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDS 214
           E+++SY+KTLA +VGSE+EA+ KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDS
Sbjct: 122 EIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDS 181

Query: 215 YLDVPNKDYGGDLFIDGKVIP-RPQYR----YNDRQQSVRNRPRPRYDRRRETMQVERTQ 274
           YLDV NKDYGG+ FIDGK +P  P+Y      N+ + + RNR   R DR R     +R++
Sbjct: 182 YLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNR---RNDRPRNN---DRSR 241

Query: 275 PFQRQNWGQDQRDPVQPPP 289
            F+R+        P Q PP
Sbjct: 242 NFERRRENMAGGPPPQRPP 247

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BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot
Match: Q9LPZ1 (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.7e-40
Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 126 KETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTT 185
           +ETI+L GCDY HWLIVMEFP D  PS ++M+++Y+ TLA V+GS EEAKK +Y+ STTT
Sbjct: 77  RETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTT 136

Query: 186 YTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVIPRPQYRYNDRQ 245
           YTGF   I EE S K K LPGVLWVLPDSY+DV NKDYGGD +I+G++IP     Y  +Q
Sbjct: 137 YTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQ 196

Query: 246 QSVRNRPRPRYDRRRE 262
           ++       RY+R+R+
Sbjct: 197 RNNTKYQSKRYERKRD 212

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BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-39
Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 63  SPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHP-IRFKSSGSGYSPLNDPSPNWS 122
           +P+S +L    SI S    +F    R   I   S  +P +R  + G   S  N+ + N  
Sbjct: 14  TPNSKTLAPLLSILSTSSLSFLPCTRPHPIKSRSAAYPTVRALTDGEYSSRRNNNNNN-- 73

Query: 123 NRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEAKKKIYSV 182
           +   +ETI+L GCDY HWLIVMEFP D  P+ E+M+++Y+ TLA V+GS EEAKK +Y+ 
Sbjct: 74  SGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAF 133

Query: 183 STTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVIPRPQYRY 242
           STTTYTGF   ++EE S K K LPGVLWVLPDSY+DV NKDYGGD +++G++IP     Y
Sbjct: 134 STTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTY 193

Query: 243 NDRQQSVRNRPRPRYDRRRETMQVERTQPFQ 273
             +Q          Y R+R+    E+ +P Q
Sbjct: 194 QPKQSRSSKYKSKAYVRQRDGPPAEQRRPKQ 222

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BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-37
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 0


Query: 56  SRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKSSGSGYSPLND 115
           +R L+ +  S+ +L+ P  I S + +    L    +     F+       SGS YSPLN 
Sbjct: 8   TRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRF----FSIRCGANRSGSTYSPLNS 67

Query: 116 PSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEA 175
            S N+S+RPP E   L  GCDYEHWLIVM+ P     + ++M++ Y++TLA VVGSEEEA
Sbjct: 68  GS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEA 127

Query: 176 KKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVI 235
           KK+IY+VS   Y GFG  I EE S K++ LPGVL+VLPDSY+D  NKDYG +LF++G+++
Sbjct: 128 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 187

Query: 236 ---PRPQYRYNDRQQSVRNRP----RPRYDRRRE 262
              P  Q R   + Q  ++RP    R RY RRRE
Sbjct: 188 QRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216

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BLAST of Lsi09G014530 vs. ExPASy TrEMBL
Match: A0A0A0KCH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318670 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.8e-121
Identity = 230/252 (91.27%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPS-SISSRLRFAFPLLNRQDQIIPNSFNHP 101
           MASSATRRTLFTVLSRS+SSSS SSSS LLPS  ISSRLRFAFPLLNRQDQIIP SFN P
Sbjct: 1   MASSATRRTLFTVLSRSISSSSSSSSSFLLPSPPISSRLRFAFPLLNRQDQIIPASFNLP 60

Query: 102 IRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSY 161
           IRFK+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPND KPS+EEMVN+Y
Sbjct: 61  IRFKASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTY 120

Query: 162 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 221
           VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN
Sbjct: 121 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 180

Query: 222 KDYGGDLFIDGKVIPRPQYRYNDR-QQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQD 281
           KDYGGDLFIDGKVIPRPQYRY+DR QQ  RNRPRPRYDRRRETMQV+R QP QRQNWGQ+
Sbjct: 181 KDYGGDLFIDGKVIPRPQYRYHDRPQQPGRNRPRPRYDRRRETMQVDRRQPIQRQNWGQN 240

Query: 282 QRDPVQPPPSMD 292
           Q DP+QPPPSMD
Sbjct: 241 QSDPMQPPPSMD 252

[Close]

BLAST of Lsi09G014530 vs. ExPASy TrEMBL
Match: A0A6J1C9B1 (multiple organellar RNA editing factor 3, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111009569 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 220/250 (88.00%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPI 101
           MASSATRRTLFTVL+RS S SS  S S    S +SSRLRFAF L+NR  QI PN+FN PI
Sbjct: 1   MASSATRRTLFTVLTRSRSFSSSFSFS----SPVSSRLRFAFALINRLGQIAPNAFNLPI 60

Query: 102 RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYV 161
           RFK+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPND KPS+EEMVNSY+
Sbjct: 61  RFKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNSYI 120

Query: 162 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 221
           KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK
Sbjct: 121 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 180

Query: 222 DYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQR 281
           DYGGDLFIDGKVIPRPQYRYN+RQQ+ RNRPRPRYDRRRETMQVER QP QRQ+WGQDQR
Sbjct: 181 DYGGDLFIDGKVIPRPQYRYNERQQTGRNRPRPRYDRRRETMQVERRQPIQRQSWGQDQR 240

Query: 282 DPVQPPPSMD 292
           DPVQPPPSMD
Sbjct: 241 DPVQPPPSMD 246

[Close]

BLAST of Lsi09G014530 vs. ExPASy TrEMBL
Match: A0A6J1H5X4 (multiple organellar RNA editing factor 3, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460412 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.9e-116
Identity = 220/247 (89.07%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 46  ATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKS 105
           A RRT FTVLSRS SSS  SSSS  LPSSISSRLRFAFPLL+RQ +IIPNSFN P+RF++
Sbjct: 2   AARRTFFTVLSRSFSSS--SSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRT 61

Query: 106 SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLA 165
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND KPS+EEMVNSYVKTLA
Sbjct: 62  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 121

Query: 166 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 225
           AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG
Sbjct: 122 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 181

Query: 226 DLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQRDPV- 285
           DLFIDGKV PRPQ+RY +RQQS R RPRPRYDRRRETMQVER+QP QRQ+WGQDQRDP+ 
Sbjct: 182 DLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQ 241

Query: 286 QPPPSMD 292
           QPPPSMD
Sbjct: 242 QPPPSMD 246

[Close]

BLAST of Lsi09G014530 vs. ExPASy TrEMBL
Match: A0A1S3C8E0 (multiple organellar RNA editing factor 3, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103497830 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.6e-116
Identity = 221/250 (88.40%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPI 101
           MASSATRRTLFTVLSRSLS+SS SSSS LL S ISSRLRFAFPLLNRQDQIIP SFN PI
Sbjct: 1   MASSATRRTLFTVLSRSLSASSSSSSSFLLSSPISSRLRFAFPLLNRQDQIIPTSFNLPI 60

Query: 102 RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYV 161
           RFK+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFP D KPS+EEMVN+YV
Sbjct: 61  RFKASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFP-DPKPSEEEMVNTYV 120

Query: 162 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 221
           KTLAAVVGSEEEAK KIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK
Sbjct: 121 KTLAAVVGSEEEAKTKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 180

Query: 222 DYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQR 281
           DYGGDLF+DG VIPRPQYRYNDRQQ  RNRPRPRYDRRRET+ V R Q  Q QNWGQ+Q 
Sbjct: 181 DYGGDLFVDGMVIPRPQYRYNDRQQPSRNRPRPRYDRRRETIPVVRRQSIQGQNWGQNQS 240

Query: 282 DPVQPPPSMD 292
           DP+QPPPS D
Sbjct: 241 DPMQPPPSRD 249

[Close]

BLAST of Lsi09G014530 vs. ExPASy TrEMBL
Match: A0A6J1L4U9 (multiple organellar RNA editing factor 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499149 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.6e-115
Identity = 219/247 (88.66%), Postives = 227/247 (91.90%), Query Frame = 0


Query: 46  ATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKS 105
           A RR  FTVLSRS S    SSSSL  PSSISSRLR AFPLL+RQ QIIPNSFN P+RF++
Sbjct: 2   AARRAFFTVLSRSFS----SSSSLSHPSSISSRLRLAFPLLDRQSQIIPNSFNFPVRFRT 61

Query: 106 SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLA 165
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND KPS+EEMVNSYVKTLA
Sbjct: 62  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 121

Query: 166 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 225
           AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG
Sbjct: 122 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 181

Query: 226 DLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQRDPV- 285
           DLFIDGKV PRPQYRY +RQQS R RPRPRYDRRRETMQVER+QP QRQ+WGQDQRDPV 
Sbjct: 182 DLFIDGKVYPRPQYRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPVQ 241

Query: 286 QPPPSMD 292
           QPPPSMD
Sbjct: 242 QPPPSMD 244

[Close]

BLAST of Lsi09G014530 vs. NCBI nr
Match: XP_038906658.1 (multiple organellar RNA editing factor 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-124
Identity = 233/250 (93.20%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPI 101
           MASSATRRTLFTVLSRSLSSSSPSSSS  LPSSISSRLRF+FPLLNR DQIIPNSFN PI
Sbjct: 1   MASSATRRTLFTVLSRSLSSSSPSSSSFFLPSSISSRLRFSFPLLNRLDQIIPNSFNLPI 60

Query: 102 RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYV 161
           RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFP D KPS+EEMVNSYV
Sbjct: 61  RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPTDPKPSEEEMVNSYV 120

Query: 162 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 221
           K LAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK
Sbjct: 121 KILAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 180

Query: 222 DYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQR 281
           DYGGDLFIDGKVIPRPQYRYNDRQQS RNRPRPRYDRRRETMQVER+QP QR NWGQ+Q 
Sbjct: 181 DYGGDLFIDGKVIPRPQYRYNDRQQSGRNRPRPRYDRRRETMQVERSQPIQRHNWGQNQG 240

Query: 282 DPVQPPPSMD 292
           DP+QPPPS+D
Sbjct: 241 DPLQPPPSID 250

[Close]

BLAST of Lsi09G014530 vs. NCBI nr
Match: XP_004150496.2 (multiple organellar RNA editing factor 3, mitochondrial [Cucumis sativus] >KGN47420.1 hypothetical protein Csa_021704 [Cucumis sativus])

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-120
Identity = 230/252 (91.27%), Postives = 239/252 (94.84%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPS-SISSRLRFAFPLLNRQDQIIPNSFNHP 101
           MASSATRRTLFTVLSRS+SSSS SSSS LLPS  ISSRLRFAFPLLNRQDQIIP SFN P
Sbjct: 1   MASSATRRTLFTVLSRSISSSSSSSSSFLLPSPPISSRLRFAFPLLNRQDQIIPASFNLP 60

Query: 102 IRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSY 161
           IRFK+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPND KPS+EEMVN+Y
Sbjct: 61  IRFKASGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNTY 120

Query: 162 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 221
           VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN
Sbjct: 121 VKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPN 180

Query: 222 KDYGGDLFIDGKVIPRPQYRYNDR-QQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQD 281
           KDYGGDLFIDGKVIPRPQYRY+DR QQ  RNRPRPRYDRRRETMQV+R QP QRQNWGQ+
Sbjct: 181 KDYGGDLFIDGKVIPRPQYRYHDRPQQPGRNRPRPRYDRRRETMQVDRRQPIQRQNWGQN 240

Query: 282 QRDPVQPPPSMD 292
           Q DP+QPPPSMD
Sbjct: 241 QSDPMQPPPSMD 252

[Close]

BLAST of Lsi09G014530 vs. NCBI nr
Match: XP_023548315.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-119
Identity = 230/264 (87.12%), Postives = 244/264 (92.42%), Query Frame = 0


Query: 29  NLQHHSATFKLSTMASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNR 88
           NL+ +SAT KLSTMA+   RRT F+VLSRS SSS  SSSS  LPSSISSRLRFAFPLL+R
Sbjct: 75  NLRCYSATIKLSTMAA---RRTFFSVLSRSFSSS--SSSSFSLPSSISSRLRFAFPLLDR 134

Query: 89  QDQIIPNSFNHPIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND 148
           Q +IIPNSFN P+RF++SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND
Sbjct: 135 QSRIIPNSFNFPVRFRTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND 194

Query: 149 AKPSDEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVL 208
            KPS+EEMVNSYVKTLAAVVGSEEEAKKKIYSVST+TYTGFGALISEELSYKVKELPGVL
Sbjct: 195 PKPSEEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTSTYTGFGALISEELSYKVKELPGVL 254

Query: 209 WVLPDSYLDVPNKDYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERT 268
           WVLPDSYLDVPNKDYGGDLFIDGKV PRPQYRY DRQQS R RPRPRYDRRRETMQVER+
Sbjct: 255 WVLPDSYLDVPNKDYGGDLFIDGKVYPRPQYRYTDRQQSGRVRPRPRYDRRRETMQVERS 314

Query: 269 QPFQRQNWGQDQRDPV-QPPPSMD 292
           QP QRQ+WGQDQRDP+ QPPPSMD
Sbjct: 315 QPIQRQSWGQDQRDPMQQPPPSMD 333

[Close]

BLAST of Lsi09G014530 vs. NCBI nr
Match: XP_022138380.1 (multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charantia])

HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-116
Identity = 220/250 (88.00%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPI 101
           MASSATRRTLFTVL+RS S SS  S S    S +SSRLRFAF L+NR  QI PN+FN PI
Sbjct: 1   MASSATRRTLFTVLTRSRSFSSSFSFS----SPVSSRLRFAFALINRLGQIAPNAFNLPI 60

Query: 102 RFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYV 161
           RFK+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIV+EFPND KPS+EEMVNSY+
Sbjct: 61  RFKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVLEFPNDPKPSEEEMVNSYI 120

Query: 162 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 221
           KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK
Sbjct: 121 KTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNK 180

Query: 222 DYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQR 281
           DYGGDLFIDGKVIPRPQYRYN+RQQ+ RNRPRPRYDRRRETMQVER QP QRQ+WGQDQR
Sbjct: 181 DYGGDLFIDGKVIPRPQYRYNERQQTGRNRPRPRYDRRRETMQVERRQPIQRQSWGQDQR 240

Query: 282 DPVQPPPSMD 292
           DPVQPPPSMD
Sbjct: 241 DPVQPPPSMD 246

[Close]

BLAST of Lsi09G014530 vs. NCBI nr
Match: XP_022959433.1 (multiple organellar RNA editing factor 3, mitochondrial [Cucurbita moschata])

HSP 1 Score: 428.7 bits (1101), Expect = 4.0e-116
Identity = 220/247 (89.07%), Postives = 231/247 (93.52%), Query Frame = 0


Query: 46  ATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKS 105
           A RRT FTVLSRS SSS  SSSS  LPSSISSRLRFAFPLL+RQ +IIPNSFN P+RF++
Sbjct: 2   AARRTFFTVLSRSFSSS--SSSSFSLPSSISSRLRFAFPLLDRQSRIIPNSFNFPVRFRT 61

Query: 106 SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLA 165
           SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPND KPS+EEMVNSYVKTLA
Sbjct: 62  SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDPKPSEEEMVNSYVKTLA 121

Query: 166 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 225
           AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG
Sbjct: 122 AVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGG 181

Query: 226 DLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQPFQRQNWGQDQRDPV- 285
           DLFIDGKV PRPQ+RY +RQQS R RPRPRYDRRRETMQVER+QP QRQ+WGQDQRDP+ 
Sbjct: 182 DLFIDGKVYPRPQFRYTERQQSGRVRPRPRYDRRRETMQVERSQPIQRQSWGQDQRDPMQ 241

Query: 286 QPPPSMD 292
           QPPPSMD
Sbjct: 242 QPPPSMD 246

[Close]

BLAST of Lsi09G014530 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative )

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-82
Identity = 164/231 (71.00%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNR--QDQIIPNSFNH 101
           MA  +TRRTL T+L+++LSSS+  SSS     ++SSR RFA PL+ +    +        
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSF---PTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 102 PIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNS 161
             R K+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  D KP++EEM+NS
Sbjct: 61  STRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINS 120

Query: 162 YVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVP 221
           YVKTL +V+G EEEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVP
Sbjct: 121 YVKTLTSVLGCEEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVP 180

Query: 222 NKDYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQP 271
           NKDYGGDL+++GKVIPRPQYR+ + Q+  R RPRPRYDRRRETMQVER +P
Sbjct: 181 NKDYGGDLYVEGKVIPRPQYRFTE-QRHTRPRPRPRYDRRRETMQVERREP 226

[Close]

BLAST of Lsi09G014530 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 302.4 bits (773), Expect = 4.0e-82
Identity = 163/231 (70.56%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 42  MASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNR--QDQIIPNSFNH 101
           MA  +TRRTL T+L+++LSSS+  SSS     ++SSR RFA PL+ +    +        
Sbjct: 1   MALISTRRTLSTLLNKTLSSSTSYSSSF---PTLSSRSRFAMPLIEKVSSSRTSLGPCYI 60

Query: 102 PIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNS 161
             R K+SGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF  D KP++EEM+NS
Sbjct: 61  STRPKTSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEF-TDPKPTEEEMINS 120

Query: 162 YVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVP 221
           YVKTL +V+G +EEAKKKIYSV T+TYTGFGALISEELS KVK LPGVLWVLPDSYLDVP
Sbjct: 121 YVKTLTSVLGWQEEAKKKIYSVCTSTYTGFGALISEELSCKVKALPGVLWVLPDSYLDVP 180

Query: 222 NKDYGGDLFIDGKVIPRPQYRYNDRQQSVRNRPRPRYDRRRETMQVERTQP 271
           NKDYGGDL+++GKVIPRPQYR+ + Q+  R RPRPRYDRRRETMQVER +P
Sbjct: 181 NKDYGGDLYVEGKVIPRPQYRFTE-QRHTRPRPRPRYDRRRETMQVERREP 226

[Close]

BLAST of Lsi09G014530 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding )

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 121/259 (46.72%), Postives = 164/259 (63.32%), Query Frame = 0


Query: 35  ATFKLSTMASSATRRTLFTVLSRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIP 94
           AT  +S        ++L  + +RS +SS+P     L  S  SS L  + PL+     +  
Sbjct: 2   ATHTISRSILCRPAKSLSFLFTRSFASSAP-----LAKSPASSLLSRSRPLVAAFSSVFR 61

Query: 95  NSFNHPIRFKSSGSGYSPLNDPSPNWSNRPPKETILLDGCDYEHWLIVMEFPNDAKPSDE 154
                 ++  S+ +  S LNDP+PNWSNRPPKETILLDGCD+EHWL+V+E P   +P+ +
Sbjct: 62  GGL-VSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRD 121

Query: 155 EMVNSYVKTLAAVVGSEEEAKKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDS 214
           E+++SY+KTLA +VGSE+EA+ KIYSVST  Y  FGAL+SE+LS+K+KEL  V WVLPDS
Sbjct: 122 EIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDS 181

Query: 215 YLDVPNKDYGGDLFIDGKVIP-RPQYR----YNDRQQSVRNRPRPRYDRRRETMQVERTQ 274
           YLDV NKDYGG+ FIDGK +P  P+Y      N+ + + RNR   R DR R     +R++
Sbjct: 182 YLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNR---RNDRPRNN---DRSR 241

Query: 275 PFQRQNWGQDQRDPVQPPP 289
            F+R+        P Q PP
Sbjct: 242 NFERRRENMAGGPPPQRPP 247

[Close]

BLAST of Lsi09G014530 vs. TAIR 10
Match: AT1G11430.1 (plastid developmental protein DAG, putative )

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-41
Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 126 KETILLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEAKKKIYSVSTTT 185
           +ETI+L GCDY HWLIVMEFP D  PS ++M+++Y+ TLA V+GS EEAKK +Y+ STTT
Sbjct: 77  RETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTT 136

Query: 186 YTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVIPRPQYRYNDRQ 245
           YTGF   I EE S K K LPGVLWVLPDSY+DV NKDYGGD +I+G++IP     Y  +Q
Sbjct: 137 YTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKQ 196

Query: 246 QSVRNRPRPRYDRRRE 262
           ++       RY+R+R+
Sbjct: 197 RNNTKYQSKRYERKRD 212

[Close]

BLAST of Lsi09G014530 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 )

HSP 1 Score: 158.7 bits (400), Expect = 7.2e-39
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 0


Query: 56  SRSLSSSSPSSSSLLLPSSISSRLRFAFPLLNRQDQIIPNSFNHPIRFKSSGSGYSPLND 115
           +R L+ +  S+ +L+ P  I S + +    L    +     F+       SGS YSPLN 
Sbjct: 8   TRHLTRALLSNVTLMAPPRIPSSVHYGGSRLGCSTRF----FSIRCGANRSGSTYSPLNS 67

Query: 116 PSPNWSNRPPKETI-LLDGCDYEHWLIVMEFPNDAKPSDEEMVNSYVKTLAAVVGSEEEA 175
            S N+S+RPP E   L  GCDYEHWLIVM+ P     + ++M++ Y++TLA VVGSEEEA
Sbjct: 68  GS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEA 127

Query: 176 KKKIYSVSTTTYTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFIDGKVI 235
           KK+IY+VS   Y GFG  I EE S K++ LPGVL+VLPDSY+D  NKDYG +LF++G+++
Sbjct: 128 KKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIV 187

Query: 236 ---PRPQYRYNDRQQSVRNRP----RPRYDRRRE 262
              P  Q R   + Q  ++RP    R RY RRRE
Sbjct: 188 QRSPERQRRVEPQPQRAQDRPRYNDRTRYSRRRE 216

The following BLAST results are available for this feature:

BLAST of Lsi09G014530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JZ6	1.5e-81	71.00	Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LKA5	3.1e-47	46.72	Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabido...	[more]
Q9LPZ1	3.7e-40	58.09	Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q38732	2.4e-39	45.02	DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1	[more]
O22793	1.0e-37	45.79	Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Lsi09G014530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCH1	5.8e-121	91.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G318670 PE=4 SV=1	[more]
A0A6J1C9B1	1.1e-116	88.00	multiple organellar RNA editing factor 3, mitochondrial-like OS=Momordica charan...	[more]
A0A6J1H5X4	1.9e-116	89.07	multiple organellar RNA editing factor 3, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A1S3C8E0	5.6e-116	88.40	multiple organellar RNA editing factor 3, mitochondrial-like OS=Cucumis melo OX=...	[more]
A0A6J1L4U9	3.6e-115	88.66	multiple organellar RNA editing factor 3, mitochondrial OS=Cucurbita maxima OX=3...	[more]

BLAST of Lsi09G014530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906658.1	1.0e-124	93.20	multiple organellar RNA editing factor 3, mitochondrial [Benincasa hispida]	[more]
XP_004150496.2	1.2e-120	91.27	multiple organellar RNA editing factor 3, mitochondrial [Cucumis sativus] >KGN47...	[more]
XP_023548315.1	2.3e-119	87.12	multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. p...	[more]
XP_022138380.1	2.3e-116	88.00	multiple organellar RNA editing factor 3, mitochondrial-like [Momordica charanti...	[more]
XP_022959433.1	4.0e-116	89.07	multiple organellar RNA editing factor 3, mitochondrial [Cucurbita moschata]	[more]

BLAST of Lsi09G014530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06790.2	1.1e-82	71.00	plastid developmental protein DAG, putative	[more]
AT3G06790.1	4.0e-82	70.56	plastid developmental protein DAG, putative	[more]
AT3G15000.1	2.2e-48	46.72	cobalt ion binding	[more]
AT1G11430.1	2.6e-41	58.09	plastid developmental protein DAG, putative	[more]
AT2G33430.1	7.2e-39	45.79	differentiation and greening-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037045	Peptidase S8 propeptide/proteinase inhibitor I9 superfamily	GENE3D	3.30.70.80	Peptidase S8 propeptide/proteinase inhibitor I9	coord: 132..218 e-value: 5.1E-7 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..266
None	No IPR available	PANTHER	PTHR31346:SF1	MULTIPLE ORGANELLAR RNA EDITING FACTOR 3, MITOCHONDRIAL	coord: 95..267
IPR039206	MORF/ORRM1/DAG-like	PANTHER	PTHR31346	MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED	coord: 95..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G014530.1	Lsi09G014530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016554	cytidine to uridine editing
biological_process	GO:0080156	mitochondrial mRNA modification
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004650	polygalacturonase activity