Lsi09G013930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G013930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Acyl carrier protein
Location	chr09: 21964057 .. 21968314 (-)
RNA-Seq Expression	Lsi09G013930
Synteny	Lsi09G013930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCGAACTACGCTACCAAACAAACATCTATAAAGGCGTTTTATTCGCAATTTGAGGTTCTCACAGTCTTCGTGCTCTCTGTCTCTATATTCTCATCTTTCCTTCTCTTTCCCTTTCATTCCATTTTCTTTCAAATCTCAGATCTCTCTGTAAACTCTCTCCTTAACAACAAGATACAAAGATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTCTCTCCGCTTCTTTCAACCAAAGCCAGGTAAATCCTTTTTTACTTCGCTTTTAGGTCTCTTAGTTGTAAATTCGTGTTACTTTTGCTTAGAACTTTTTAGATTTGGTTCTATTATAATCTTTTGATTTGCATGCTTTACTTTTATGAAGTGTTTTTTCATGATCTGATTTGTTTTATTGGAAAATGTATGTGTTTGTTCCACTTGATTCAAGTTACAGATTGCTTTTTTGGTTTATGAGATTTGTTGTTGAGATTGAGCGAGTAAAATTTTAAATTCGTGAGGATTTGACTGGATTGGATTCGGTTAAGGTAATTTTAAGTTACTTTTGCTCAGAACTCTGTAAATTTGGTTCTTTGAACCTATTTATTTGCGTGCTTTACTTTTGCGAAGGCTCATGATCCGATTTGTTTTTTTTTTTTGATAATGTAAGTGTTTGTTCCATGTGCTTCAATTTACAGATTACGTTTTAGGTTACTGAGGTCTACTATTGAGATTGAACGAGTGAATTTTAAAATTCTTAGGATTTTACTTGATTGGATTCGGTTCAAGGAATTTTGAGCTTGGACGATGATAGATCTGATTAATTTTATCTTGCGTTCTTGAGTTTAGGCGTTGGATTTGACTGTAGAATCATATTTTGTTTGTTTAATATTGAGAAAACTTATATAGTTTTCATATTTATTATGTTGCATGATTCTTTAATGCTTCTGCTGTAATCTTCGAGCAGTTGTCAAGCGCCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAGAGCCATTTTTCCCTCGAGAAGGAACTACAGGCAGGGAAGCCTTCAGATTTGCTGTGCGGTAAGTGTTCTTCTCCTATATTTTTCTTGATTTAATAATAAAAGTTTATCTTCCCCGGTATGATAGTGAGGGTTCCATGCATATTTGTTACTGGCTTTTAATCGTCTAATTGTCAAAACTATTCTTGTTTAGTTCATATTATTCTCTCTGAAATTGTTGCAACGAATTGGCTAGTAATAGCTCAACTCAATTAGACCGGAGATCAAATTCTAGCCCCTAATCCTCTTATATGACATGAAATCGTGGTTCTGTTTGTTTTCGCCCCAATCTTCGTACGTTTATTGTTTTTTTTTGGTAGTTTTCTGTTTTCTGCAGATTATGATTGTGCGAGATTGGCAGCTAAAGACAAATATTCATAACAAAGTTAGTTATAGGTAGATGAAATCTTCTAGAAAAAGTCTGCATGTTGGTAACTGCTTTTGTTTGCGTTGATTCTGAGAATTTTTCACAATTGTGAAGGAGCTACTCTATTCTCATTAATTAGAAAGATTACAACTCAGACTATTTATAAGACTTTAGGCTACTGAATCTCTTAACAAAATAACATTAAATCAAAACAGAACAACTAACAAATAATAAAACGAATATTCAACTAATGAGGTTACTTAATATATTCCAAATTCCTAAAACGACCCACACCATGACAATATTTTGACCATCCTCATGTGTTTGTGAGTTTATGCTTTATGTAGAGCCTCAACACTTTCAATGATCAGTTTGTTGTTTTTTTTTTTTTTTTTTAATTTGAAAAAAACATGAGTACTATTAAGTTTTAACCTAGATTGTATTTCAATGGAGATGGTTCTTTCTTTTCTTGCATCCATACAATAATGTTTGTAAATTAGTAGTTACAGAACTTGTGAAACTCTTGGACAGGCTAAACCAGAGACCGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGCAGATTCTAAGGTCGATGGAGAATCCAAGTTTTCTGAGCTCGGAGCTGATTCTCTTGATACGGTAAATAGACATCTTCCAACATATTATGCTTGCATGTATTATTACTTCCCAATATATTGTAAAATGTTTTCCCATTTTCACTGCTGAAGGCATCACTACTAGCATCTGCAACTTAAGCCCCCTTCGATAATTTATTATTATTTTTTTCCTTTTGGTTCTTTAAAATGAAAGATTTTAAACACTATTTCCACCCTGATTTTCTTTATCTACGTTTTTATTTTTTAAAACTTGAGAATAAGTACATTTTTCAAAAATAAAATACTAAATAGTTATTAAATGAGCCTTAATATTTCCTAATTTCTTCACTGCGGAGGGATTGAGTTCATTCAGTTTTCTAAAAAGAAAAAATAAATATATGAAAGGAGAACTTTTAAAAATAGAAAAAGAAGGGAAACTATTTATACAAAAGAGCAAAATTTTTAAATAGTTGTGATAGATGTTGATAGACTTCTATCATTTCTATCGGTCTATCATTAATAGTATCAATATTTTTTTTCTATGTGAAAATTTCTCTATATCAAATGGTAATTAAATTTTAAAGCCCAAACACAAGTTTTTAAGAATAAATTTATGTTTTCCTAAATTTTACTTTAAGTACTTTAAGAAACCCAATCTATTCTCCCTTTAGCATATTATTATTCTTTCAAGCATCTCTCTCCCCGATTTACTTTTCTCTATATATACTTTTTCCTTTTAACGTTTCTTTCTCAAACTCGTATCTGTATGGATTCTTCTTTTTCTCAAACTCTTTTTGAAATATCCCTCTATAAATCATGATAAATCTTTTTAACACATTTAATTTTTATTTTAACTTATACTTATTTTGTTTTCATCCTCTCAAATGTTCTAATCAAAGAAATGAATAGTCCTGACATTGACCTATGACTTTAGGAACCAAAATAAATAAACATGGAGGTTTGAATGCCATAATAAGATTAAGAAAATATATATTTAAACAATAGGATTGTTTTCAAATATAAAAAAATAAGTCAAACTATTTACAAATATAAATTTTTTTTTACAGTTAGAATTTTATCACTAATAAACAGTAAATTTTTTCTATATTTGTAAATAGTTTTATACATTTATTTTATTGTTTCTTAAAGTCGACGGTTCACACTTATTCCTCCAATCTCATTTTTTTAGTAAGCCGTAATTTAAATTTTGTTATATATTTTTCCAAAAATCAATATGTTTAATGTTTAGAAAAAGAAACAGAGAAAATTTTTAAAAATGTCAAATTATTTACAGAAAATAACAAAAAAAAAATACTGATAGACATTGATAGATTTTTATCAACATATATCTGTGATAGACTTCAATAATTTCTATCACTATTTCTAGACTTTTATGAGCGTTGTTATTTTGTGTAAATAGTTTTTCTAATTTTTCTATTTTTAAAAATTTCCCAAAAGAAAAAGAGCTATTTGGATTTGATTGATTTTTTAAAGAAAAATTCTACCAAATTGTCCAATCATAAATTACTTTTGAGAGAATTCTTACTTTTTTTTATATATATTTTAATTTATTATATTTATTATTGAGACTCATAAATGTGGGTGCATCAACCCAACCAATAAAGAGTATTGTTGTGTGTGTGTGTTTTTTTTTAATTTTATTTTTCCATTAAAGAGTAATTATTGGTGTATAATTTGATATTTTGAATGTGGGGATGTAGGTTGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAAGAAGAGAGCGCCCAAGCCATCACCACCGTCCAAGAGGCTGCCGATCTGATCGAGGACCTCATTTCTAAGGATTCCGCTGCCTAATAATTCTATTTCCCCCTTATTTTAGATTTCTATTTTTAGATCTCTCTCTCTCTCTCTTTGGATTTTGCTTTTAGCTGCTTTCACCATCTTCATCTTTTTCTTTTCCCTTTAAAAACTTTCTTTATATATCTACAAACGTTTACTGCGTGGCCTCATTCACTCTCTCTAAATTTTAAAACCCTGCGTCAGAATTTTGATTCACTTTTCTTTGTCCTTATTTATTTTTCTTCATCATCATTATTATTATTATTAAACAAGTTTCTAGAATGTTCCACTTCTTTCTGCATTTCTTATTGCTTCTGTAATTGTTTCCCTCATATTCTATCTCTTAAGTTTCCTGTCTCGGTGGTTAAGCCTAGTGAATATACTTTTTGACATTCATTTTAT

mRNA sequence

AAAACCCGAACTACGCTACCAAACAAACATCTATAAAGGCGTTTTATTCGCAATTTGAGGTTCTCACAGTCTTCGTGCTCTCTGTCTCTATATTCTCATCTTTCCTTCTCTTTCCCTTTCATTCCATTTTCTTTCAAATCTCAGATCTCTCTGTAAACTCTCTCCTTAACAACAAGATACAAAGATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTCTCTCCGCTTCTTTCAACCAAAGCCAGTTGTCAAGCGCCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAGAGCCATTTTTCCCTCGAGAAGGAACTACAGGCAGGGAAGCCTTCAGATTTGCTGTGCGGCTAAACCAGAGACCGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGCAGATTCTAAGGTCGATGGAGAATCCAAGTTTTCTGAGCTCGGAGCTGATTCTCTTGATACGGTTGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAAGAAGAGAGCGCCCAAGCCATCACCACCGTCCAAGAGGCTGCCGATCTGATCGAGGACCTCATTTCTAAGGATTCCGCTGCCTAATAATTCTATTTCCCCCTTATTTTAGATTTCTATTTTTAGATCTCTCTCTCTCTCTCTTTGGATTTTGCTTTTAGCTGCTTTCACCATCTTCATCTTTTTCTTTTCCCTTTAAAAACTTTCTTTATATATCTACAAACGTTTACTGCGTGGCCTCATTCACTCTCTCTAAATTTTAAAACCCTGCGTCAGAATTTTGATTCACTTTTCTTTGTCCTTATTTATTTTTCTTCATCATCATTATTATTATTATTAAACAAGTTTCTAGAATGTTCCACTTCTTTCTGCATTTCTTATTGCTTCTGTAATTGTTTCCCTCATATTCTATCTCTTAAGTTTCCTGTCTCGGTGGTTAAGCCTAGTGAATATACTTTTTGACATTCATTTTAT

Coding sequence (CDS)

ATGTTCTCCATCGCTGGATCTTCGGTTTCCATGCCGTCTCTCTCCGCTTCTTTCAACCAAAGCCAGTTGTCAAGCGCCAGGATCTCAGGTTTGAAATTAGTTTCGGCGCCTTTAGGCAGAGCCATTTTTCCCTCGAGAAGGAACTACAGGCAGGGAAGCCTTCAGATTTGCTGTGCGGCTAAACCAGAGACCGTGGACAAGGTGGTTGAAATTGTGAGGAAACAGCTTGCTTTAGCTGCAGATTCTAAGGTCGATGGAGAATCCAAGTTTTCTGAGCTCGGAGCTGATTCTCTTGATACGGTTGAGATAGTGATGGGACTGGAAGAGGAATTTAAGATCAGCGTTGAAGAAGAGAGCGCCCAAGCCATCACCACCGTCCAAGAGGCTGCCGATCTGATCGAGGACCTCATTTCTAAGGATTCCGCTGCCTAA

Protein sequence

MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQAITTVQEAADLIEDLISKDSAA

Homology

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BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-32
Identity = 87/142 (61.27%), Postives = 104/142 (73.24%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPL-GRAIFPSRRNYRQGSLQICCA 60
           M S+ G+S+SM S  AS     L+ +R+S L+ VS P+ G++  P R   R     +CCA
Sbjct: 1   MASVTGTSISMASFKAS-----LAPSRVSNLRSVSLPIKGKSFAPLR--MRSARFVVCCA 60

Query: 61  AKPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEES 120
           AKPETV+KV  IV+KQLAL  DS V GESKF+ LGADSLDTVEIVMGLEEEF I+VEEES
Sbjct: 61  AKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEES 120

Query: 121 AQAITTVQEAADLIEDLISKDS 142
           AQ+I TVQ+AADLIE LI K S
Sbjct: 121 AQSIATVQDAADLIEKLIEKKS 135

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BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31
Identity = 83/135 (61.48%), Postives = 99/135 (73.33%), Query Frame = 0


Query: 5   AGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKPET 64
           AG+S+ + S S     S L+  RIS L+ VS P+ R  FPS R+ +    ++ C AKPET
Sbjct: 6   AGASICIKSASC----SPLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPET 65

Query: 65  VDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQAIT 124
           V KV  IV+KQLAL  DS+V+G SKFS LGADSLDTVEIVMGLEEEF ISVEEESAQ+I 
Sbjct: 66  VAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQ 125

Query: 125 TVQEAADLIEDLISK 140
           TVQ+AADLIE L+ K
Sbjct: 126 TVQDAADLIEKLMEK 136

[Close]

BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-31
Identity = 85/135 (62.96%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 5   AGSS-VSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQG-SLQICCAAKP 64
           AGSS + + S S S N++Q+ S  +S L+ VS P+   IFPS R+ R   S ++CC AK 
Sbjct: 6   AGSSLICIKSASCSLNRAQVPSG-LSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQ 65

Query: 65  ETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQA 124
           ETV +V EIV+KQLAL  DS+V+G SKFS LGADSLDTVEIVMGLEEEF ISVEEESAQ+
Sbjct: 66  ETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQS 125

Query: 125 ITTVQEAADLIEDLI 138
           I TVQ+AADLIE L+
Sbjct: 126 IQTVQDAADLIEKLV 139

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BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 85/136 (62.50%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 5   AGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQG-SLQICCAAKPE 64
           AG+S+ +   SASF  S L+  RIS L+ VS P+ R  FPS ++ +   +L++ C AKPE
Sbjct: 6   AGASICIK--SASF--SPLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPE 65

Query: 65  TVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQAI 124
           TV KV  IV+KQLAL  DS+V+G SKFS LGADSLDTVEIVMGLEEEF ISVEEESAQ+I
Sbjct: 66  TVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSI 125

Query: 125 TTVQEAADLIEDLISK 140
            TVQ+AADLIE L+ K
Sbjct: 126 QTVQDAADLIEKLMEK 137

[Close]

BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-29
Identity = 84/133 (63.16%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 7   SSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKPETVD 66
           SS+ + S S     S L+  RIS L+ VS P+ R  F SRR     SL++ C AKPETV 
Sbjct: 8   SSICIKSASC----SALAPGRISSLRSVSLPVSRKSFFSRRG--SFSLRVNCQAKPETVT 67

Query: 67  KVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQAITTV 126
           KV  IV+KQLAL  DS V G SKFS LGADSLDTVEIVMGLEEEF ISVEEESAQ+I TV
Sbjct: 68  KVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTV 127

Query: 127 QEAADLIEDLISK 140
           Q+AADLIE L+ K
Sbjct: 128 QDAADLIEKLMEK 134

[Close]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL
Match: A0A5A7SWA3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001200 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPSLSASFNQSQ++S +ISGLKLV APLG+AIFP RRNYRQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETV+KVVEIVRKQLAL  DSKVDGESKF +LGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSA 143
           Q+ITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL
Match: A0A1S3C7Z5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPSLSASFNQSQ++S +ISGLKLV APLG+AIFP RRNYRQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETV+KVVEIVRKQLAL  DSKVDGESKF +LGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSA 143
           Q+ITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL
Match: A0A0A0K8V5 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 127/142 (89.44%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPSLSAS N+SQ++S RISGLKLV APLG+AIFP RRNYR GSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKVVEIVRKQLALA DSKV+GESKF++LGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSA 143
           Q+ITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL
Match: A0A6J1H3R9 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111460148 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSV MPS+SASF  SQ+S+ RISGLKLVSAPLG+AIFP RRN+RQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVYMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPET+DKVV+IV+KQLAL  DS V+GESKFSELGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKD 141
           Q ITTVQEAAD+IE +ISKD
Sbjct: 121 QTITTVQEAADMIETIISKD 140

[Close]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL
Match: A0A6J1CAG9 (Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111009698 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 116/140 (82.86%), Postives = 126/140 (90.00%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFS+AGSSVSMPSLSASF Q Q SS RIS LKLVS P GRA +P +R+YRQG LQ+CCAA
Sbjct: 1   MFSVAGSSVSMPSLSASFKQIQASSGRISSLKLVSVPFGRASYPLQRSYRQGRLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKVVEIVRKQLALAADS V+GESKFSELGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAADSNVNGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKD 141
             ITTVQ+AADLIE L+++D
Sbjct: 121 STITTVQDAADLIESLMAQD 140

[Close]

BLAST of Lsi09G013930 vs. NCBI nr
Match: XP_008458496.1 (PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 233.8 bits (595), Expect = 9.2e-58
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPSLSASFNQSQ++S +ISGLKLV APLG+AIFP RRNYRQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSLSASFNQSQVTSGQISGLKLVPAPLGKAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETV+KVVEIVRKQLAL  DSKVDGESKF +LGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALNEDSKVDGESKFIDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSA 143
           Q+ITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]

BLAST of Lsi09G013930 vs. NCBI nr
Match: XP_011656665.1 (acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN46190.1 hypothetical protein Csa_004843 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-57
Identity = 127/142 (89.44%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPSLSAS N+SQ++S RISGLKLV APLG+AIFP RRNYR GSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSLSASLNRSQVTSGRISGLKLVPAPLGKAIFPLRRNYRLGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETVDKVVEIVRKQLALA DSKV+GESKF++LGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVDKVVEIVRKQLALAEDSKVNGESKFTDLGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSA 143
           Q+ITTVQEAADLIEDLISKDSA
Sbjct: 121 QSITTVQEAADLIEDLISKDSA 142

[Close]

BLAST of Lsi09G013930 vs. NCBI nr
Match: XP_038876091.1 (acyl carrier protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54
Identity = 125/143 (87.41%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSS+SMPSL+A    SQ+S  RISGLKL SAPLGRAIFP RRNYRQGSLQ+CCAA
Sbjct: 1   MFSIAGSSLSMPSLAA----SQVSITRISGLKLASAPLGRAIFPLRRNYRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPETV+KVVEIVRKQLALA DS V+GESKFSELGADSLDTVEIVMGLEEEFKISVEEESA
Sbjct: 61  KPETVNKVVEIVRKQLALAEDSNVNGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKDSAA 144
           Q+ITTVQEAADLIEDLISKDS+A
Sbjct: 121 QSITTVQEAADLIEDLISKDSSA 139

[Close]

BLAST of Lsi09G013930 vs. NCBI nr
Match: XP_023547704.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575046.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013622.1 Acyl carrier protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52
Identity = 117/140 (83.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSVSMPS+SASF  SQ+S+ RISGLKLVSAPLG+AIFP RRN+RQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVSMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPET+DKVV+IV+KQLAL  DS V+GESKFSELGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKD 141
           Q ITTVQEAAD+IE +ISKD
Sbjct: 121 QTITTVQEAADMIETIISKD 140

[Close]

BLAST of Lsi09G013930 vs. NCBI nr
Match: XP_022959041.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-52
Identity = 116/140 (82.86%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MFSIAGSSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAA 60
           MFSIAGSSV MPS+SASF  SQ+S+ RISGLKLVSAPLG+AIFP RRN+RQGSLQ+CCAA
Sbjct: 1   MFSIAGSSVYMPSISASFKHSQVSNGRISGLKLVSAPLGKAIFPLRRNFRQGSLQVCCAA 60

Query: 61  KPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESA 120
           KPET+DKVV+IV+KQLAL  DS V+GESKFSELGADSLDTVEIVMGLEE FKI+VEEESA
Sbjct: 61  KPETMDKVVKIVKKQLALDEDSVVNGESKFSELGADSLDTVEIVMGLEEAFKINVEEESA 120

Query: 121 QAITTVQEAADLIEDLISKD 141
           Q ITTVQEAAD+IE +ISKD
Sbjct: 121 QTITTVQEAADMIETIISKD 140

[Close]

BLAST of Lsi09G013930 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-26
Identity = 77/137 (56.20%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 7   SSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKPETVD 66
           +S+S  SLS     + +S          S   GR    S ++ R   LQI CAAK ETV 
Sbjct: 2   ASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGR-FTSSTKSLR---LQISCAAKAETVQ 61

Query: 67  KVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQAITTV 126
           KV +IV++QLALAAD  +  ESKFS LGADSLDTVEIVM LEE+F ISVEE  AQ ITT+
Sbjct: 62  KVSDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTI 121

Query: 127 QEAADLIEDLISKDSAA 144
           QEAADLIEDL+ K  AA
Sbjct: 122 QEAADLIEDLVQKKPAA 134

[Close]

BLAST of Lsi09G013930 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 72/137 (52.55%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 13  SLSASFNQSQLSSARIS----------GLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKP 72
           S S S   S L++ RIS          G   +S  L R+I PSRR      L + CAAK 
Sbjct: 6   SASVSLQTSCLATTRISFQKPALISNHGKTNLSFNLRRSI-PSRR------LSVSCAAKQ 65

Query: 73  ETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQA 132
           ET++KV  IV+KQL+L  D KV  E+KF++LGADSLDTVEIVMGLEEEF I + EE AQ 
Sbjct: 66  ETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKAQK 125

Query: 133 ITTVQEAADLIEDLISK 140
           I TV++AA+LIE+LI++
Sbjct: 126 IATVEQAAELIEELINE 135

[Close]

BLAST of Lsi09G013930 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 105.9 bits (263), Expect = 2.7e-23
Identity = 77/149 (51.68%), Postives = 90/149 (60.40%), Query Frame = 0


Query: 7   SSVSMPSLSASFNQSQLSSARISGLKLVSAPLGRAIFPSRRNYRQGSLQICCAAKPETVD 66
           +S+S  SLS     + +S          S   GR    S ++ R   LQI CAAK ETV 
Sbjct: 2   ASLSTTSLSFKAPSTTISQVLRKASSSQSVTFGR-FTSSTKSLR---LQISCAAKAETVQ 61

Query: 67  KVVEIVRKQLALAADSKVDGESKFSELGADSLDT------------VEIVMGLEEEFKIS 126
           KV +IV++QLALAAD  +  ESKFS LGADSLDT            VEIVM LEE+F IS
Sbjct: 62  KVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNIS 121

Query: 127 VEEESAQAITTVQEAADLIEDLISKDSAA 144
           VEE  AQ ITT+QEAADLIEDL+ K  AA
Sbjct: 122 VEESDAQNITTIQEAADLIEDLVQKKPAA 146

[Close]

BLAST of Lsi09G013930 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-23
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 45  SRRNYRQGSLQICCAAKPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIV 104
           S R      L + CA K ETV+KV EIV+KQL+L  D KV   +KF+ELGADSLDTVEIV
Sbjct: 42  SLRRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIV 101

Query: 105 MGLEEEFKISVEEESAQAITTVQEAADLIEDLISKDSA 143
           MGLEEEF I++ EE A+ I TVQ+AA+LIE+L+ + +A
Sbjct: 102 MGLEEEFGITMAEERAKEIATVQQAAELIEELVQEKTA 139

[Close]

BLAST of Lsi09G013930 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 54  LQICCAAKPETVDKVVEIVRKQLALAADSKVDGESKFSELGADSLDTVEIVMGLEEEFKI 113
           L + CAAKPETVDKV  +VRKQL+L    ++   +KF+ LGADSLDTVEIVMGLEEEF I
Sbjct: 48  LTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGI 107

Query: 114 SVEEESAQAITTVQEAADLIEDLI 138
            + EE AQ+I TV++AA LIE+L+
Sbjct: 108 EMAEEKAQSIATVEQAAALIEELL 131

The following BLAST results are available for this feature:

BLAST of Lsi09G013930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93092	1.4e-32	61.27	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52414	2.6e-31	61.48	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P52413	3.4e-31	62.96	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]
P52411	1.7e-30	62.50	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P52412	3.2e-29	63.16	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]

BLAST of Lsi09G013930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWA3	4.5e-58	90.14	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111...	[more]
A0A1S3C7Z5	4.5e-58	90.14	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103497888 PE=3 SV=1	[more]
A0A0A0K8V5	1.3e-57	89.44	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_6G067970 PE=3 SV=1	[more]
A0A6J1H3R9	3.7e-52	82.86	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111460148 PE=3 SV=1	[more]
A0A6J1CAG9	1.1e-51	82.86	Acyl carrier protein OS=Momordica charantia OX=3673 GN=LOC111009698 PE=3 SV=1	[more]

BLAST of Lsi09G013930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458496.1	9.2e-58	90.14	PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo] >KAA0033459...	[more]
XP_011656665.1	2.7e-57	89.44	acyl carrier protein 1, chloroplastic [Cucumis sativus] >KGN46190.1 hypothetical...	[more]
XP_038876091.1	3.6e-54	87.41	acyl carrier protein 1, chloroplastic-like [Benincasa hispida]	[more]
XP_023547704.1	1.5e-52	83.57	acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6575...	[more]
XP_022959041.1	7.6e-52	82.86	acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Lsi09G013930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	5.8e-26	56.20	acyl carrier protein 4	[more]
AT3G05020.1	1.2e-23	52.55	acyl carrier protein 1	[more]
AT4G25050.2	2.7e-23	51.68	acyl carrier protein 4	[more]
AT5G27200.1	4.6e-23	59.18	acyl carrier protein 5	[more]
AT1G54580.1	2.5e-21	63.10	acyl carrier protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 65..119 e-value: 0.0037 score: 20.8
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 60..140 e-value: 2.1E-23 score: 84.2
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 62..141
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 63..135 e-value: 2.6E-22 score: 76.4
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 63..137 score: 16.802624
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 66..133 e-value: 2.7E-11 score: 43.7
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 62..137 score: 20.596239
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 1..141
None	No IPR available	PANTHER	PTHR46153:SF7	ACYL CARRIER PROTEIN	coord: 1..141
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 92..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G013930.1	Lsi09G013930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding