Lsi09G012440 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G012440
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CASP-like protein
Location	chr09: 20086068 .. 20088551 (-)
RNA-Seq Expression	Lsi09G012440
Synteny	Lsi09G012440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGCCAATCAACGCGTGCTGCCGAAGAAGGCCATTTAGGGATTTTCATTTCTCATTTTTACTCTCTTTCTACTTTTGTATCTTCCCATTTCGACTCTTCAAAGATCAATGGCACCCAGGTTTGGTAATCGCTTCAAAACCCACATACCAGAAGACACCAACATCCACATTACTCTGTTTTTTTGTGTTGATTGAAGGATTTTTGGCTCTCATTTGGTGATCCCTTTGGATTTTGCTGATTAGGTTTTCTGGGTTTTGATTTGGGGAATGATGGGGATTTGAGAGCATTCTGTTGATTGTGGATGGAGAATTGGAGGAGAAGAAAATGGGGTTTGTTGTTGCATTTTGGATCTGTGATTGATGATTGTGTTTTGATTTGGGGCAGAGGGGAAATATGTTGGATTTTCCTGGGACTCCAGGGACATTGACTGGGTTTGTGTTGAGGATTTTGCAATGTGTTTTTGCTGCTGGGTCTATTGCTTCCATGGCTACTTCTGTTGGCTTCTATAACTTCACAGCTTTTTGGTATTTATTCATTTTCACCCTTTTCTTCTTTTGGCATGATTGTATGGATTGTATTTCAAATCGAATATTCCTCAAGGGTTTTCTTGAGTATTGTATGACTTGTGAATCTTTGATTGAATTAGAAATTTTGGGAATGCTGCTGCTCAGTCTAATCCTATTTGTGATCCTTGCCTTTTAGTGGTGGTTTGGCTGCTTTTAGTTTTGGCTTTTCATTGCTGCCTTGCAAGTTTGAAAATAGCTATAGTTTGAATAGGGCACTCCATTTGAGCTTTTATTTTATGAAAAACCTTTGAATAATTGTACAGGGAATTTGGGGTTTTAAGGTGGGGGTGGGGTTATTGGTTAGTTTCTATTTAGAAGTTCAAGAGCTGTTTTTGCAGAGCTCTCAGAAAGCTTCTTGCATTCTTGAGCTTAGCATTTGCTGTGTCTGTTCTTCATTTTCATTCATTTGATATGGGAAGATTTTGTTACAATTTCAATTTAGTTTCTTTCTAAATAACCCTTTTCATGTTTTACATTAACTCATAAACATTCCTTAAGAAATCAGTGAAGATAATTGTGTAGAAGAAACTATGAGGTACCTTCTGATACTGTATGAACATACTCGTCTGGCTCGTTTGAAATCGAGATGAAATGTACATTTGCCTGTCATACATACAACTCTGTGCCTTTGCTGTATTTTTCTCTCAACTACTACTCTTGGTCTTGGTTGCTTGAGAATGTTACCATTGCTCATTGGATATAATAAAATCTCTATCATACAGTAAAGTTATCAAAATTTGAGATGATATACGACACGAATTGAACTCCTTTTTTATGATTCACTCATGATTTGCAGCTATGTGATCGCGTCGATGGGTCTGCAAGTGACTTGGAGTTTTATGCTGGCATTGTTAGATGCATATGCATTGGTAAGAAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTTGTTGGAGATTGGGTGAGAATTCTGAGTTGCTTTAGATTGTGTTTTGTGATTACTATTAGGGAAGTTCATCCATTTATCAATTTATTGGTTTGCAGGTGACAGCAACATTGTCTCTCGCTGCAGCTTCTGCCTCTGGTGGGGTAGCGGTATTGTTCTTCAGCGACTTAGGACACTGCAGTTTCATGGACGAATGCCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGAACACATATTCATACCGCGAAAATTTCACGTAATTTTCTTACATCTGTTTAATCTTTGTTAATTTTTTCGACATAGAAAGGGAATCAAGATAGGTGAATAGAATGATGCCAGTGAGCAGTTTGTTGAAAAAGAATTGGCTCTTTTCCCCTTCATTCCGATGCAACTTTAGAGAAATACAGAGTATAACTAGGGGTTGGGCTATTTGGTCTTTTTTGTTCTTCGTATTCGTAGGTTAATTATCGTTGAGCTATATTCATGTATTTGGAAGAGCATTTTGGTTGATTATTTTAGCCACTCTCATCTGTCCAAACTGCCAAGTGGCAACTGCTGAGTGGCTGCATATTCAATCTACTTTGAAAATAAGAGGTATTTGTTCTATTCACTGTGGCTGGATTCTAAATTATGGATCAAGTGCAAATGCTGCACCTCAATGAAGCACTCTGTCAAAGAATATGGTTTAAACTTTAATGCGTCGTTTGTTTTGCGGACATCTAAGATTTCTATGGAGTGGATATTTAGATTACCGTGCTTGTTTTACAGTAATGAAAGATGCCTTCATCTAAATATTCCTCGATATCCTAGGATGTCCATATGAGGCATCTTGAGAGAATTAGATGCCCTCCTGAAACATGGGTTTTCTCGATTTCCATGTTGAGGGCATCTCATTTTTACTTTTTTACCCTTCATATTTTCTTTTTGTCTCTCT

mRNA sequence

ATGGTGGGCCAATCAACGCGTGCTGCCGAAGAAGGCCATTTAGGGATTTTCATTTCTCATTTTTACTCTCTTTCTACTTTTGTATCTTCCCATTTCGACTCTTCAAAGATCAATGGCACCCAGAGGGGAAATATGTTGGATTTTCCTGGGACTCCAGGGACATTGACTGGGTTTGTGTTGAGGATTTTGCAATGTGTTTTTGCTGCTGGGTCTATTGCTTCCATGGCTACTTCTGTTGGCTTCTATAACTTCACAGCTTTTTGCTATGTGATCGCGTCGATGGGTCTGCAAGTGACTTGGAGTTTTATGCTGGCATTGTTAGATGCATATGCATTGGTAAGAAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTTGTTGGAGATTGGGTGACAGCAACATTGTCTCTCGCTGCAGCTTCTGCCTCTGGTGGGGTAGCGGTATTGTTCTTCAGCGACTTAGGACACTGCAGTTTCATGGACGAATGCCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGAACACATATTCATACCGCGAAAATTTCACGTAATTTTCTTACATCTGTTTAATCTTTGTTAATTTTTTCGACATAGAAAGGGAATCAAGATAGGTGAATAGAATGATGCCAGTGAGCAGTTTGTTGAAAAAGAATTGGCTCTTTTCCCCTTCATTCCGATGCAACTTTAGAGAAATACAGAGTATAACTAGGGGTTGGGCTATTTGGTCTTTTTTGTTCTTCGTATTCGTAGGTTAATTATCGTTGAGCTATATTCATGTATTTGGAAGAGCATTTTGGTTGATTATTTTAGCCACTCTCATCTGTCCAAACTGCCAAGTGGCAACTGCTGAGTGGCTGCATATTCAATCTACTTTGAAAATAAGAGGTATTTGTTCTATTCACTGTGGCTGGATTCTAAATTATGGATCAAGTGCAAATGCTGCACCTCAATGAAGCACTCTGTCAAAGAATATGGTTTAAACTTTAATGCGTCGTTTGTTTTGCGGACATCTAAGATTTCTATGGAGTGGATATTTAGATTACCGTGCTTGTTTTACAGTAATGAAAGATGCCTTCATCTAAATATTCCTCGATATCCTAGGATGTCCATATGAGGCATCTTGAGAGAATTAGATGCCCTCCTGAAACATGGGTTTTCTCGATTTCCATGTTGAGGGCATCTCATTTTTACTTTTTTACCCTTCATATTTTCTTTTTGTCTCTCT

Coding sequence (CDS)

ATGGTGGGCCAATCAACGCGTGCTGCCGAAGAAGGCCATTTAGGGATTTTCATTTCTCATTTTTACTCTCTTTCTACTTTTGTATCTTCCCATTTCGACTCTTCAAAGATCAATGGCACCCAGAGGGGAAATATGTTGGATTTTCCTGGGACTCCAGGGACATTGACTGGGTTTGTGTTGAGGATTTTGCAATGTGTTTTTGCTGCTGGGTCTATTGCTTCCATGGCTACTTCTGTTGGCTTCTATAACTTCACAGCTTTTTGCTATGTGATCGCGTCGATGGGTCTGCAAGTGACTTGGAGTTTTATGCTGGCATTGTTAGATGCATATGCATTGGTAAGAAAGAAGATGCTTCACAATCCTATTCTGGTCAGCCTCTTTGTTGTTGGAGATTGGGTGACAGCAACATTGTCTCTCGCTGCAGCTTCTGCCTCTGGTGGGGTAGCGGTATTGTTCTTCAGCGACTTAGGACACTGCAGTTTCATGGACGAATGCCGAAAGTTCCAAATCTCTGTTGTTTTAGCCTTTCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGA

Protein sequence

MVGQSTRAAEEGHLGIFISHFYSLSTFVSSHFDSSKINGTQRGNMLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDECRKFQISVVLAFLSWITIAISALIMLWILAAV

Homology

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BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-53
Identity = 108/151 (71.52%), Postives = 128/151 (84.77%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M+D PGTPGTLTG VLRI QCVFAAGSI+ M TS GF++FTAFCY+IA+MGLQV WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A+LD +ALVRKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F DLG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAA 196
           C K+Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.3e-40
Identity = 88/154 (57.14%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M D  G+PGT +G  LR+ QCVFA  S+ +MA++ GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 165 --CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
             C ++++SV+LAF++W  IA SA+ M W+LA++
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

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BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.3e-40
Identity = 88/154 (57.14%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M D  G+PGT +G  LR+ QCVFA  S+ +MA++ GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 165 --CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
             C ++++SV+LAF++W  IA SA+ M W+LA++
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot
Match: B6T990 (CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.0e-39
Identity = 88/154 (57.14%), Postives = 112/154 (72.73%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M D  G+PGT +G  LR+ QCV A  S+ +MAT+ GF N+TAFCY+IASMGLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 165 --CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
             C ++ +SVVLAF++W  IA SA+ M W+L ++
Sbjct: 121 LSCGRYALSVVLAFITWSFIATSAVSMFWLLPSL 154

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BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-38
Identity = 87/151 (57.62%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M D PGTPGT+ G  LR+ Q +FAA S+  M TS  F NFTAFCY+ A+M LQ  WSF+L
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A +D YAL+ K+ L N IL+SLFVVGDWVTATLSLAAA ++ G+ VLF  DL +C  M  
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCDQM-H 151

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAA 196
           CR++Q+S  +AF SW+ IAIS+LI L +L +
Sbjct: 152 CRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL
Match: A0A5D3CAJ7 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00480 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 183/212 (86.32%), Postives = 185/212 (87.26%), Query Frame = 0


Query: 1   MVGQSTRAAEEGHLGIFISHFYSLSTFVSSHFDSSKINGTQ----------------RGN 60
           MVGQSTRAAEE HLGIF SH Y  STFVSSHFDS KIN TQ                 GN
Sbjct: 1   MVGQSTRAAEERHLGIFFSHSYFFSTFVSSHFDSLKINDTQGILLIVDGELEEDKEMGGN 60

Query: 61  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 120
           ML FPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 61  MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 120

Query: 121 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 180
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSF +E
Sbjct: 121 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 180

Query: 181 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWIT+AISALIMLWILAAV
Sbjct: 181 CRKFQISVVLAFLSWITVAISALIMLWILAAV 212

[Close]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL
Match: A0A5A7VDG4 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001420 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.2e-73
Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 40  TQRGNMLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT 99
           T RGNML FPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT
Sbjct: 2   TPRGNMLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT 61

Query: 100 WSFMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC 159
           WS MLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC
Sbjct: 62  WSLMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC 121

Query: 160 SFMDECRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           SF +ECRKFQISVVLAFLSWIT+AISALIMLWILAAV
Sbjct: 122 SFGNECRKFQISVVLAFLSWITVAISALIMLWILAAV 158

[Close]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL
Match: A0A0A0LIJ4 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G179230 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 146/152 (96.05%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATS+GFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSIGFYNFTAFCYVIASMGLQVTWSLML 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSF  E
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGKE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWIT+ ISALIMLWILAAV
Sbjct: 121 CRKFQISVVLAFLSWITVTISALIMLWILAAV 152

[Close]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL
Match: A0A1S3CDC1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103499409 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           ML FPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 1   MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSF +E
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWIT+AISALIMLWILAAV
Sbjct: 121 CRKFQISVVLAFLSWITVAISALIMLWILAAV 152

[Close]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL
Match: A0A6J1KMZ0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 145/151 (96.03%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           MLDFPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           ALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LGHCSF DE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAA 196
           CRKFQISVVLAFLSWITIAISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 151

[Close]

BLAST of Lsi09G012440 vs. NCBI nr
Match: TYK08224.1 (CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87
Identity = 183/212 (86.32%), Postives = 185/212 (87.26%), Query Frame = 0


Query: 1   MVGQSTRAAEEGHLGIFISHFYSLSTFVSSHFDSSKINGTQ----------------RGN 60
           MVGQSTRAAEE HLGIF SH Y  STFVSSHFDS KIN TQ                 GN
Sbjct: 1   MVGQSTRAAEERHLGIFFSHSYFFSTFVSSHFDSLKINDTQGILLIVDGELEEDKEMGGN 60

Query: 61  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 120
           ML FPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 61  MLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSLML 120

Query: 121 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 180
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSF +E
Sbjct: 121 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGNE 180

Query: 181 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWIT+AISALIMLWILAAV
Sbjct: 181 CRKFQISVVLAFLSWITVAISALIMLWILAAV 212

[Close]

BLAST of Lsi09G012440 vs. NCBI nr
Match: KAA0065678.1 (CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-72
Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 40  TQRGNMLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT 99
           T RGNML FPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT
Sbjct: 2   TPRGNMLAFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVT 61

Query: 100 WSFMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC 159
           WS MLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC
Sbjct: 62  WSLMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC 121

Query: 160 SFMDECRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           SF +ECRKFQISVVLAFLSWIT+AISALIMLWILAAV
Sbjct: 122 SFGNECRKFQISVVLAFLSWITVAISALIMLWILAAV 158

[Close]

BLAST of Lsi09G012440 vs. NCBI nr
Match: KAG6593844.1 (1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.2 bits (718), Expect = 6.9e-72
Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 37  INGTQRGNMLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGL 96
           +  ++ GNMLDFPGTPGTLT FVLRILQCVFAAGS+ASMAT+VGFYNFTAFCYVIASMGL
Sbjct: 312 VKNSKLGNMLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGL 371

Query: 97  QVTWSFMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDL 156
           QVTWSFMLALLDAYAL+RKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+L
Sbjct: 372 QVTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNL 431

Query: 157 GHCSFMDECRKFQISVVLAFLSWITIAISALIMLWILAA 196
           GHCSF DECRKFQISVVLAFLSWITIAISALIMLWILAA
Sbjct: 432 GHCSFGDECRKFQISVVLAFLSWITIAISALIMLWILAA 470

[Close]

BLAST of Lsi09G012440 vs. NCBI nr
Match: XP_038875242.1 (CASP-like protein 5B3 isoform X1 [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHC+F DE
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCNFGDE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWITIA+SALIMLWIL AV
Sbjct: 121 CRKFQISVVLAFLSWITIAVSALIMLWILVAV 152

[Close]

BLAST of Lsi09G012440 vs. NCBI nr
Match: XP_004142183.1 (CASP-like protein 5B3 isoform X1 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70
Identity = 146/152 (96.05%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATS+GFYNFTAFCYVIASMGLQVTWS ML
Sbjct: 1   MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSIGFYNFTAFCYVIASMGLQVTWSLML 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSF  E
Sbjct: 61  ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFGKE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAAV 197
           CRKFQISVVLAFLSWIT+ ISALIMLWILAAV
Sbjct: 121 CRKFQISVVLAFLSWITVTISALIMLWILAAV 152

[Close]

BLAST of Lsi09G012440 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-54
Identity = 108/151 (71.52%), Postives = 128/151 (84.77%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M+D PGTPGTLTG VLRI QCVFAAGSI+ M TS GF++FTAFCY+IA+MGLQV WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
           A+LD +ALVRKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F DLG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILAA 196
           C K+Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Lsi09G012440 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 148.7 bits (374), Expect = 5.0e-36
Identity = 84/149 (56.38%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 50  GTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFMLALLDA 109
           G PGT+ G +LRI QC  AA SI  M ++  F   TAFCY+IASMGLQ+ WSF LA LD 
Sbjct: 6   GGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGLACLDV 65

Query: 110 YALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE--CRK 169
           YAL  KK L NPILVSLFVVGDWVTA LSLAAA +S GV VL+  D+ +C+   +  C +
Sbjct: 66  YALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQYPCLR 125

Query: 170 FQISVVLAFLSWITIAISALIMLWILAAV 197
           ++++V L+F++WI IA+S+ +  WILA+V
Sbjct: 126 YEVAVALSFVTWIQIAVSSHVTFWILASV 154

[Close]

BLAST of Lsi09G012440 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 144.4 bits (363), Expect = 9.4e-35
Identity = 81/146 (55.48%), Postives = 101/146 (69.18%), Query Frame = 0


Query: 50  GTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFMLALLDA 109
           G+PGT++G +LR+ QC  AA SI  M +S  F N+TAFC+++ASMGLQ+ WSF LA LD 
Sbjct: 6   GSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDV 65

Query: 110 YALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMD--ECRK 169
           YA+ RK  L +PIL+SLF VGDWVTA L+LAAA +S GV VLF  D   C       C +
Sbjct: 66  YAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPALSCDR 125

Query: 170 FQISVVLAFLSWITIAISALIMLWIL 194
           FQISV L+F +W   AIS+  M WIL
Sbjct: 126 FQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Lsi09G012440 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 34  SSKINGTQRGNMLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIAS 93
           ++++    R  M D  G PGTL G  LR  Q +FAA ++  MA++  F + TAFCY++A+
Sbjct: 18  ATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAA 77

Query: 94  MGLQVTWSFMLALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFF 153
            GLQ  WS  LA++D YA++ K+ L N  LVSLF +GD VT+TL+ AAA AS G+ VL  
Sbjct: 78  TGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLID 137

Query: 154 SDLGHCSFMDECRKFQISVVLAFLSWITIAISALIMLWILAA 196
           +DL  C+  + C +F+ S  LAF+SW     S L   W LA+
Sbjct: 138 NDLNSCA-QNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Lsi09G012440 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 63/150 (42.00%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 45  MLDFPGTPGTLTGFVLRILQCVFAAGSIASMATSVGFYNFTAFCYVIASMGLQVTWSFML 104
           M D  G PGT  G +LR+ Q V A  S++ M T+  F + TAFC ++ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 105 ALLDAYALVRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGHCSFMDE 164
            ++DAYAL+ ++ L N  +V  F +GD VT+TL+ AAASAS G+ VL  +DLG C+ ++ 
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCN-VNH 150

Query: 165 CRKFQISVVLAFLSWITIAISALIMLWILA 195
           C +F+ +  +AF+SW  ++ S ++  W LA
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLA 178

The following BLAST results are available for this feature:

BLAST of Lsi09G012440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	3.4e-53	71.52	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
B8BD96	4.3e-40	57.14	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	4.3e-40	57.14	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]
B6T990	8.0e-39	57.14	CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1	[more]
D5ACW4	6.8e-38	57.62	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]

BLAST of Lsi09G012440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAJ7	1.3e-87	86.32	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G0...	[more]
A0A5A7VDG4	5.2e-73	96.18	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001...	[more]
A0A0A0LIJ4	1.4e-70	96.05	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G179230 PE=3 SV=1	[more]
A0A1S3CDC1	1.8e-70	96.71	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103499409 PE=3 SV=1	[more]
A0A6J1KMZ0	2.4e-70	96.03	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1	[more]

BLAST of Lsi09G012440 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08224.1	2.6e-87	86.32	CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0065678.1	1.1e-72	96.18	CASP-like protein 5B3 isoform X1 [Cucumis melo var. makuwa]	[more]
KAG6593844.1	6.9e-72	92.45	1-aminocyclopropane-1-carboxylate oxidase-like 1, partial [Cucurbita argyrosperm...	[more]
XP_038875242.1	1.5e-71	97.37	CASP-like protein 5B3 isoform X1 [Benincasa hispida]	[more]
XP_004142183.1	2.9e-70	96.05	CASP-like protein 5B3 isoform X1 [Cucumis sativus]	[more]

BLAST of Lsi09G012440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	2.4e-54	71.52	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	5.0e-36	56.38	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	9.4e-35	55.48	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	2.7e-29	44.44	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.6e-24	42.00	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 52..180 e-value: 3.8E-25 score: 88.4
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 45..195
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 45..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G012440.1	Lsi09G012440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane