Lsi09G010900 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G010900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein Ycf2
Location	chr09: 17301423 .. 17317588 (+)
RNA-Seq Expression	Lsi09G010900
Synteny	Lsi09G010900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAGTATGTATACATTCACTCATATAAAATAGGATCAATTCCCATCTACCATTGCGTATTGGTACTTATCCAGTATAGAATAGATCTGCTTCTTTTTGTTCCTACGAATAGAATAGAATTGTTCCATTATTACTAAAAGAATAGAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACAAGTTCCTGGATAACAAGCCTAAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGATCGTGACCTTGATACGGAGCTGGAGCTTCTAACTATGATGAATGCGTTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCATGTAAGATTGTGTCATCAAGAAAGAGGGAATCACTGCTCCCTACTAGGCTTAATCCCATGATCTAGAATCGCATGCTAGCGCGCACAACCGTTGGAGCGTCACTTCTCAGGGTGAGCGTCGCGATGTTGTGGCCCAAGAAGTCGTAGCGTAGAGTAATGCTGTGACACAGCGTTGTGACGGTGTGCTTTACACTGTAGCACAGAATGCTAGCTCTGCTTCTAATTTCCTCCAATTTTGCTTTTGATTTTTTTTCCTTAGCAACACTTGCTCCTCGATCGACACGGACTTACAGACTCGATAGCAGAAAGTAAATGTCTGTTTTTGTTCATATATTTTTACTATCTATCTATACTATCTAAAAGAGGTTACGAAGGAAAAATATTTGATTTTCCGTCTTGTCCCTTTTAGTGAATGGTTATAGGATATATTAGTTAATTTTACGTTTAAAATCATTAAATAAATTATTTTTTCCCTATTTTTTAGCATCACGCGCAAAATAAAAAAAATCTAATTTTTCTTCTATTTTTTAGCACTAGACGTGAATGGTATTAAATATTTTTTAAAAATTAATTTCATTTTAACATGAATGATATCTTGATTCATTAAAAAAAATAGTTTCAATTTTGATTTATTTTCAAGGTTTGAATTAAGATCAAATCAAAATTTCTCTATAAATTCAATACTTACACTCCAATTTTTCATCGATTATGTCTTTCTCTCTTTCTTTCTCATGTTTTTTTTTCTTTTTTTCTATTTCATTAATAACTTTTTGTTTTCTTTTTGTAGTATTATGCCTAAGTCTTAACTCCAACTCCAACTCCAACTATTCTTTTCATCTGTAATCTATTTCTTTTTATATGGTAAAACAATTGAGTTTTAAAATATTTATGAGCTTTTCCATTGAATAGGAATCACAATCCTTACCTTCCTCTCACCGTTCTTTTCTCTCTCTCTCTTTTTTTTTATGAATACTTTTTATAATTGGTGTGAAATTAAATTTGATTAATTGTATGTATTGAGTTTTGATTTTAAATTTAGATGAATAACAAATTATGACTTTTTCAAACCAATGGAATTAAGGTGTTAATCAAATCATCCAATAAAAATCTTTTAGTTTAAAATAAAGTTTGCAATTAGAAGATAGTCATATCATCCAAATCTAAATTAAAAATATTTTTTATTACATAAATTATCACAAAATAAAAATATCAATAAAATTAAAAGAATAATCAAATCATCCCATTCTAAATAAATAAATAAATAAAAGATTTTGTGGGTGAAAAAATTGTATCTTTTTAATTCAGAGAGGATTATCATGAAATTAAAAAAAAAAAAAAAAAGTGAATAGATCTTTTGTTTAAAATGAAAGTTTGAAACTAACAAAATTAATAAAATCATCCAAACAAAAATAAATAAATAAAAAGATTTTTTATACTAAGATGATTATCACAAATTTTATAGAAGAATGAAAAATGTTTTCTTTTAAATTAAAGTTTAAAATTAGGGAGATATCTAAAATAAAATAAAATATATATTTTTTTAAAAAACTAAAAGATGGTTATCATGAAAATTTGAAAATATATATTTTTTATTTCAATTAAAACTTAAAATTAAGAAATCAAATCATTCAAACAAAAATAAAAAAGAATTATTTTTAAGGAAAATTTTCACAATAGAAAAAATGTCAAACTATTTATAGAAAATAGCAAAAAAAAAAAAAAAATACGGATATACATTGATAGACTTCTGTCAGCATCTATTAGTGATAGACTTATATTATTTCTATCACAGATAAACCCTGAAAAACTTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTCCTTATTTTTCTATTTTTAAAAACTTTCCTTATTTTTAACTAAGAGACAATTATCATGAAATTTTAAAAGACTTAATTTTGTGAAAAAAATAAATTAACCAATATAACTTCTATTACACATATTTTTCTCAAATTATTCAAGTATTTATTTTATTCCTATAAGACACGTGGAATGCGCGTAGTATTCGGCTAGTTACCACTAAGGGTATTTTTTAATTTTTTTTTTAAGTTTAAGGGTATTTTTTTTTACTAAAAATTCAAGGGTATTTTTGACACAAAACAATAACGATTTCTATCCAAAACTAACGATAAGAGTATTTTTTTAAAAAAAAGTTTAAGGGTATTTTTGAAACTTTTGAAAATTCAAGGGTGTTTTTGACACAAACTACAAAGTTTAGGGGTATTGTGCATAATTTAGCCTAACTAATAATATGTTTTCTTGACAATGATATAATTAAATTAGTCAAAACCTATATCCTCAACTAAAATATTAGAGGTTCGAATCCTACCATTACCTTCACATGTTGTGAAACTCTGAGTAAAGGGGAAAAATAATTTTTAAAAAATGTATCATTGTTCCAATACTTAAAAAAACACTTTAATCTCACAATGGTTTTCTATCCTAGAGGTTGGAGGTTCGATCCTTCATCCTCATAATTGTTGTACTAAAAAAAATTAAAGGGTAAATTGCAAAAACTACAGCCGTATGGTACTAGTTGCAATTATACCCTCAAACCTAATAAGTGTTAAAATTGGACAATCAAGAATGATTGGAATACAATCTCACTTCTAACCTTTTGGTTTTTTGAAAAAACCACTTTAACCTTCCAATTAACCTTGGACAAACAATAACAAAATTAATAGTAAAAGATCTAAAAGAAATACACAATATCTATCCATCGAAATCCTAGAAAATATGTTTGGTAAAGAGCCATCATTTTTTAGATCATTTGAAGAAGGGTAATACTTGAGATGTGTCCATCTCTATACTTTTTCATCCATCACTCACATAAAAAAAAAAAATTAAAAGATTTTAAAAAATAAATAAAAATAATTTGTCATATGTCACACTATAATAAAATAATTTAATGGAATGCATAAAGATAAATACTTGTGAGATGCACTTAAATATTTTTCCTAGGAGGAAGAGACCGACAGGAGCCAAAGGAGCGGGCGGCTCTTTCTCCAGCCTAGGGATTATTATCGGTTAAGTTAGGATGAAAAATATCAACCTATTCATTAACTATCCTAATCATCCATTATTTTCTTCCTTGATGCTTCCGTTTGAATACATTGTTTGACCAAAAAAACAAAATAATATATAATATTTCAAACATCCTTTCCCAATAAAAAAATCAATCCAACTTAAAATAATATAATTTGATGTCTTAAGTTATTATATTTTTTCCTCCGTCGAATAACTGAATAATTCCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACATGATCGAACAATTATGATTTAAGTATTATTGTATTTAATAAAATAACAACTTTACATTGAAAACATCCTCCATAAATCCTATAGCTTCTAGAAAGAAAAGAAAAAAAAAAACGACTCAATAATTTGTTTGTATAGAAATAGAAGAATATTTTTTAATGATATTTTATGTTGAACGATTTGAACAAATAAAATATTGCTTGTGCTTTTCTGCTTATTTAATAATAAGTTAAAATGTTACTTTCATCCTCGTATACGTTGGAGTTGGTTTACTTTTAATCCTTGCATTTTTCAAATGAGAAAAACTTGGGTATATTTAGCATATCTATTGTGCAAGTCTTGCTATACCCAATAAAAAATTATAATGTGGTAATTTTATTTTAAATAATTAAAAAATTATTTACTTTTTTGTGTGTAAAAGAAAATGGAGCAAGAGATTAGGTTTTTCAAATATGCAATTTTAGTCTATGTACTTTTAATAAATTTTAGATTTAGTCGATTAAAGCTCATTTTTAACTAAATTGGCTAAATATTATATGTGAGTATTTTTTAAAATTTATGAAAATGTTAATAGATAGTAAAAATTTTTGAAAAAAATCAGCAATATTGATTAAATTCAAAATTTATTAAGAATAGACTAAAATTGAACCAATTCCAAATAAGAACCAAAATTGTATTTCAACCCCTTAATAATATCATTGATTTTATGTATGAAAAGACCCTTAATAATATCATTGATAATTCTCCTTTGCAAGGGAATGTTGTTGATAACTTTAACTATTTGTTTGTCTTCACGTTAATTCTATTTTGGCTTTTAAATTTTTTTGTTTATTTCATTTCTCAAGTCTTTCAAATTTTTAAATATTTTATTTCTGTTAAATTATTTATTTAAAAACTTGATTTATTGTGAAAGATTTTTCTTGAATTATTTTACAAAACTTTGATTTGGGCATATATCTTTGATGATAACTTGATGAGTCAAGAAATAAGTTATAATATGAACCCTAGCTTATTAGTTAAGAAATATTTGCTTATAGATTTGAAATCCTACTCCATATTTATGATATATCCAGACAAATTAGTAAGTTTTTCAATCCTTTTACTTCTTTTTTTTTTTAAAAAAAAAAAAATCATAATTGACAATACTTTTGTTTTGGTCATGATTAATGAAATATCATATTTTTTTCACAAAATTTAAGAAACTAAACAAAAGGCGGAGAGATTAGAATATAATTTTTTTTTAATACAATAGAGATAGTAGAATTTGAACCACTAACGTTTGGTTGTATTAACACATCTTTTATATCACGTGACTAAGCTCACCTGACATTATTATTCTTTTATTATTATTATTATGGGTAATCTTGGATCGAGGACAAAAGTGAGATAACAGCACAAAGAAAAGGACTAAAGAAGAAATAAGGAAGTGGGTCGAGACAGCATTGATCTGGTCGGCCTCTCGGCCATGAGGCTGAACCACTCAGACTAGTTATCCAGGGTCAATTGAGGTACGTTTGGGCTCGAGTGTCTTTTTTTACTGAGCCCAAAACCAAGCAACCCAATTGAGCCTCAGCCTCGAACAAGACTAGGCCCATAGCGGCCGAACTTAGAGAAGCAAAAGGAAACCCTAATAAGGAAATGCGAGAAGACTCAGGAAGGAAATCCGAGAAGGAAGCGGAGAAGGCCTGAGCCTTATAAATAAGAGGAGGGAGCAAACAAACGAGGTAAGTAAAAACTTCCAACTAAGTATTGAATTGGCTTTGAACCTCCCTCTAACTCAAGCATCGGAGTGTGTGGCTACACCACACCGCTGTGTAAATCTCTTTTCTAATTTGCAGGTTGTTTTCCAAAATACAAATTTACCGTTGATTCTGCCCTAGAGTTAGTATAAATTACTCGACCCAAAATTGGTATCAACAATTATTATTATTTCTTGAAAAACTGACCTGACATTAGAATATAGTAGTTGATGGTAGAATGTAATGTTTCAATTTTAGAAACTAGGAAGGAAAGAAAAATGAAAATTGATGAGCTAAAATATGATTTTATTACAAATATCATAAATTAAGTGTAAATTAGATGCCCATGCTTAGGGTCAATTGGCCATGTGTCAATCATATAATTACCCATGTATTATCCATGTGTCTCAAAATAACCTACTATTAGTATCCATGTAATCCACCTCCTACTTAACAAATTGCCTATAAATAGTGGCATTTTGTGGATTTTAGGAGATGCACATACATTGGTGAGAAATCCAAAAAATTTGGAAATAATTGAGAAATTTGGAGAGTTTTTTATTTAAGTTATTTTATATATTTTATTATTATATTATATTTCTCCAATATTTGTATTGTTGTGATGCCCGTTTTTCTCCTCGATTTTAGAGCGTCACTTGTACGCATTAGACCAGTAGCTTATCATAAGTACTCGGCATTACAATTAGCTTAAGGTCAGAAGCCAAATATTTCCCATCTAAGAATTTTTGGATGTGCAGTATATGTTCCAATTGCTCCACCACAACGTACTAAGATGGGTCCTCAAAGGAGGTTAGGGATATATGTTAGATATGATTCCCCATCAATTATTAAATATCTTGAACCCCTGACGAGTGATGTATTTACTGCACGATTTGCTGATTGTCATTTTAATGAGACAAATTTTTCAACATTAGGGGGAGGAATTATGAAGTTGGAAAAAGAAATTACATGGGATGCATCTTTATTGTCTCATTTAGATCCTCGTATAGATCAATGTGAACTTGAAGTTCAGAAAATAATTCATTTGCAAAATATAGCAAATCAGTTACCAGATGCATTTATAGATGCAAAGAAAGTAATTAAATCACATATACCAACTGTAAATGTTCCATAAAAAATTGATATCCCAACGCAGCAAGTTGTCACTAATGAGTCTGGAACACGATAGAAGCGTGGTAGACCAGTGGGTTCTAAAGATAAAAATCCTCGAAAAGAAAAATAGTCGATAGCAAAAAAGACTTGGCTGAGGATGTAAATACTCATGAAGAAATCCTTGACATGACTAGTGAAGAATGTGAAATACCTAAAGATAATAATGAGATTTCAATAAACTATGTCATGACAGGAAAAAGATGGAACCGAACTAATGTAGTTATTGACAACATTTTTGCATATAATGTTGCTCTTGATATTATATCTGAAAATGAAGATTCTGAACCAAAATCTGTTGAAGAATGTCGATATAGAAAAGGTTGGCTTAAGTGGAAAGAAGCAATTGAAGCAGAATTAAACTCACTTTTAAAATGTCAGGTTTTTGCACTAGTAGTCCAAACACCAGAAGATGTCAAACCTGTGGGATACAAATGAGTATTTGTGAGAAAAAGAAATGAAAAAATGAGGTCATAAGATATAAAGCAAGACTAGTTGCACAAGGATTTTCACAAAGACCTGGTATTGATTATGAGGAGACATATTCTCCAGTGGTGGATGCAATTACACTAAGATTTTTAATTGGTCTAACTGTGTATGAAAATCTAGATATGCATCTTATGGATGTAGTCACGACATACTTATATGGATCTCTTGATAATGATATTTATATGAAAATCCCAGAAGGATTTAAGATACTTGAAACATATAAATCAAATTCTCGAGAATTATATTCAATAAAGTTACAGAGATCACTATATGGATTAAAACAATCAGGACGAATGTGGTATAATCGTCTGAGTGGATATTTATTGAAAGAAGGATATCAAAATAATCCAATATGTCCGTGTATTTTTATAAAGAAATCACAGTCAGGGTTTGCCATGATAATTGTATATGTTGATGACTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCGATAGAATATCTTAAGAAAGAATTTGAGATGAAAGATCTCGGAAAAATAAAATTTTGCCTTGGATTGCAAATTGAGCATTTAGCAGATGAGATATTTGTCCATCAATCAACTTACACAGAGAAAATCCTGAAAAGATTCTATATGGATAAAGCACATCCATTAAACATTCCAATGGAAGTTCATTCACTGGATGTAAAGAAAGACATATTTCGACCTCGAGATAATAATGAAGAACTTCTTGGTTCTGAAGTACCATATCTTAGTGCAATTGGTGCACTTATGTATCTTGCTAATAATACAAGACCAGATATTGCATTTTCGGTAAATTTATTAGCTAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGGAATTAAACATATACTATGTTATCTCCGAGGAACGATCGACATGGGTTTGTTTTATTTAAATAAATCAAATTTTGATTTAGTTGGTTATGCAGATTCTGGATATTTATCTGATCCACACAAAGTGAGATCTCAAACAGGTTATCTATTCACATGTGGAGGAACTGCTATATCATGGCGGTCGGTGAAACAAACTATAACGGCTACTTCCTCAAATCATGCCGAAATTCTTGCAATTCACGAGGCTAGCAGAGAATATATATGGCTAAGATCAATGTCTCAACATATTCGTGAAACATGTGGCTTATCTTCTAGTAAAAGTCTTCCAACAATATTATACGAAGACAACACAGCATGTATAGCCCAAATCAAAGGAGGATATATTAAAGGAGATAGAACAAAGCATATTTCACCCAAGCTTTTCTATACTCATGATCTTGAAGAAAATGGCGACATCAATGTACAACAAATTTGTTCCAAGGATAACTTGGCGGACTTATTTACAAAATCATTACCAACCACAATTTTTGAAAAATTGGTACACGACATTGGAATGCGGCAACTCAAAGATCTTAACTGATCATGAGGGGGAGCAAAAATGTTGTATTCTTTTAGAAGTATTAAAATATATTAAATATGTGCTCTTTTCCCTTCACTAGGATTTTTTTCCCATTGGGTTTTTTCCTAGTAAGGTTTTAACGAGGCATATTTCATATATAATAGGTATCTAAGGGGGAGTATTACAAATATCATAAATTAAGTGTAAATTAGATGCCCATGTTTAGTGTCAATTGGCCATGTGTCAATCATATAATTACTCATGTATTATCCATGTGTCTCAAAATAACCCACTATTAGTGTCCATGTAATCCACATCCTACCTAATAAATTGCCTATAAATAGTGGCATTTTGTGGATTTTATGAGATGCACATACATTGGTGAGAAATCCAAAAAGTTTGGAAATAATGGATAAATTTGGAGAGTTTTTTTATTTAAGTTTTTTTATATATTTTATTATTTTATATATATTTTTATTATTATATTATATTTCTCCAATATTTGTATTGTTGTGGTGTCCGTTTTTCTCCTCGATTTTATAACAGATTTAAATTATTTTTAAGAAATATAAATGCTTCTCTGAAAATAAATAAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTATTTTTATATTTCATTAAATACAATAATCAAATTTCCAAAATGTATCTATTTTTCTGTTTTTTAATATATACTAATACTAAATTGATTGATGAGAGAGAATAGATTAAAAAATTAAAAAAGTCTAAAAAAAAGCTAAAATCTAGATATAAAAATTTGGGAAATTATTATAGACAAAAAAAAAAAAAAAATCAAACTATTTACAAATATACAAATATAGAATTCTATCGCGGTCTATTGTTGATGGACAGTAAAAATTTTCTATATTTGTAAATAGTTTGACTCATTTTTTATATTTGAAAACAACCTTAAAATTTTCTTATATCTTAAAATATTTATGAAATATTAGTGGTGAATTAGACTAATAAGCTAAATATTTCTTTTCTTTAATAAGCTTTTAGTTCATATAACTGTAATTAATCATTATTTGTTCAATTTAATTATCATTTGTTTAAAGGTCAAAATCTATGCCATAAGAGCATAGCTAGGTGATAATTGGTAAATGTTGGTAGCCAATAAAAAATGGTCAAAATCATTTTTTTATATAGTTTTTGCCAATATTGGAAAGATCAAGAGAAATCAAACCTTTTACTTTGAGATTGATAATACATGTGTTTATTCTAGTCGAGTTTTGATGTTTTGAACATTTATCAAAGGTATGTAAGTTACATCTACTAGAAGCATATTTCCATTTCGCCCCTTAAAAATTAAGCATATTTCTTACCAATATATTATTAAGTTAAAATATCATTTTGTTCTTTGAGTTTTGTTCAATTTTAGTCCATGTACTTTCAATATTATGCAATTTCAATCCCCATGCTTTTAAGAAATCTTAAATTTATTCCAATGCTAATTTATTATTGACTTTTTAAAAGATTTTTTTGTTATCTATATTAGCATTTTTACCATAAATTTTCAAAACATATTCACATTTTGTATTTTCTTGCATAAAAATTATCATTATTATTTAATTAATTTTGGTAAAATTAATTTTGAGTGACTAAATTTAATATCTATTTAAATTATAAAGACTAAAATTTGACAATTTAAAGTACAAATTAAATTTCAACCAACTTCAAAGTATAGAGATCAAAATAATATTTTAACTATATTTTTATTAATGTCTTTATTATTTATAATTTTTTAGAAACCTATCGCAATATGTGGTTAATAATTTTTCTATAATTATTATGCTTTAAACAAAAAAAAAAAAAAAAAAAAATCCAAAGTGGGAGATCAAACCACCCATCCTTAAGAATGGTGTTGAATCTTAGCCAACGTATTTACTTCTCATTTTTTTAGTGGAATATTCTTGTGGTCCTTTTCAACTAATACAGTTAGAAAAAAAATGGTATCTAAAAAAAATTAAGAAAAATATAAAAAAAACAATATTTTTGTCCATATATCATTGGTCCGTAGACTTTTGACTTTCGTCTCAACTCGTAATTATTTGGACATATTGAAGACTTTTTAAATTAATTGAAAAAATGAACCATTAATTCCAATGAAAAGGACGGAGATGCCACTTTCCATAAATTCCAAATGTGAGATCAACTTGAGTTGGTCCAAAATTAAAAGTAGTTTCACTTTCACCTGACGCGTGTTTTAGCAGTCTCACGCGCTGTTATGTACCTAATTTTAAGTAAGGTATTGATTTTGTACTTACACATCCTACGTTTTCTACTTCTTTGTTTAGCTTATTACATTTTGGAAGGACTATTTTTAAATATAAAAAAATAAGTTAAAATATTTTTTTTTACTTATTTGTTTAGCTTATTACATTTTAGAAGGACTCTTTTCAAATATAAAAAATAAGTTAAAATATTTATAAATATAGAAAAATTTTATTATCTATCCTAAATCGTGATAGACTTATAGATAATAAAATATTTCTATATTTATAAAAAGTTTGATTTTTTTTTATTTATAATAATTTTTCATTTATTTATTTATTTACTTTTAAAAAGGTTTTTCAGTTTAATACTCTAATGTTCTATTACTTCCAATTTACTTGTTTGTCCTTTTGAAATGATTTTCATTCATATAAAACTTGTTCTCATTTTAGCAAAAATCAACTGGATTAAGAGACAAAATATGGTACTTACAAAAAAAAAAAATGTAAATAACAACAACTAAAATCAGCATAGTTCAACTAATGTAAAAAAAAAAAAATTAGAAGAAAAAGATAGTTTTGAAATAATTTAGGAAAAATGGGTAATTTTTTTTTTTTTTTTTTGTACTTATTTGAATCAACTTTATTTTTATTGTTTTTTTAATTGATTGGACTTCTTTGAGATGCGTGTATATCCCTCTCTTTCTTTTTCTAACGTTTTTTTTTTCTTTTATTGTTTAATATTATTTTTAATTAAAAACTCAATAACAATTATTAACATTTTCAAAAAATTATCTGCCATTACTTTATGTTGTGTTCAGTATGGTTGAAGAATTTAATGATTTAACTATAACCTTATGCCGTGCCCTAATTAATAAATGAAATGAGTAATCTACTTTTAAATGCAATGTTTTCTCTCTTAAAACCCAAGTATAAGTCTTAATAGAGTCCTAGTGAGTCCAGGGTCGAACACAGGGACTATCGACCAAAATGTGTTTGAGTTTAATGTGTGTTGAGTGAGTTTTATATAACCAAATTTGTAAACTAATTATAAGTATGGTGAAAGTGGATGATGGTGGAGAGTGAAAGTAGTAGTGAGTGATGATGTGTTGAGGTGTTATGATGTGTGGATTGATGGAAGTGAAAATGATGATGATGCTTACAAGCACGATTTAAGCAGCTTACGTGGAAATGAAGGAAAAATCGATTGATAAAACAAGTTTGAAGAGGGATACTAACATTTTCCTAAGTGATGAATAATTTATGTATCATGTCATTAACTTAGAAAGTAAAGAACTCACGTCTCGGTGTTTTTAAGCCACATTGCCCTGACGCATACTTGAGTTAATTTCAGACAAAAGGTTAACTTTACCCCTAAAGCTACTTCTTTCCCTTATTAAATGAGGTTCACAATCATTTAGTTTCTCAAACAGTTGATTATTTCTACTTAAATCAATCTCTCAATTAGATTCAAGCAATGTATTATGCACATATTAAACAAGATGAACTTTAACTTATGCAAAACTTAGTGAAAATGTAAGTTTGACCTCCTCAACCCATTAGACAATTAGTTACTCATATTAAGGGAAAGATAATGCATGAATTGAAGAAAGATGGAAGAAATCATATTTATATTAAGAAGTATGAGCTTTTCAATCTCAAATAACTTAATACAAATGAAGATGATAAGAAGAATGTAATAAAGACAAAAAAATGAGAGCATCAAGTCGCTTGTCACAATGTCTTGCTTCTTTTGGCTTGTATAGTGGTTGCTTTAATGGTGGTTGCAATGGAGGTAGTGGAGCTCTCGCCTTTTTTTGTGAAGAAGATTGAGTTCTCACTCAAAATTCCTCAAAGAAAAGGTTGAAAGGTCGAAGCCAATGATGGAATTATGGTGGAGTTATGGAGGAATTTAGGCAGAGCTTCAGCCGATCTCTCGATGGGAAGTCTTAACACTTAAACAAATTCTAATGGGCTATTTATAGGAGTCAAAAGGAAGCTTCTTTGTCTCTTTCTAATGATGATTTGAGATCTTTGCATTTAATTTCATGCCCTGTTGCGCCGCCTACTTGCTTCATAGGTTCATTAGTTCTGTCACGATTGTCTCAAATCAGATACCAACTTGCATTTTGATTTGACATCCACCCCCCATTCATTTTTCGTTTTCTCTCTTCATGTTTCTGCTCATCGCATGGTTCTTTGCGTGCAAGATTGAGAGTTTATCTGATCACTTTATATGCGTCCACGGCTGCAGCTTTTGTTTTCTTAGTTTGCTTTTGCTTCTTTTCATCATAATCCTGCATTCAAAGATGTTAGATTTTATAATTTTTAGGATAATGAGTTTTGTAAATACATGAACGCAAAGTGTAATTATCAACCTGAATTTAATATCAAGTTATCACTTTACCATTGTTATTTTTCAAAATTAAATGTCTAATTCATTATAAAAAATTTAATGAGTTTTTAAATAAAAATAACATTTAAAACTAAAATTATTTTATTTTGATCATGAAGTAGGGGTGTTCATAGAAACCAATCAAATCAAACCGAACCGAACCCACTAGTGTCCAAAACTAGTTGTGTCTCTACGAGAGAAGCATTTAAAAGACCATTTTTTTTATTTAAGAGGTTTTTTTTTCTTTTGGAGATTTAAGATGGGGATTTTTCTAAAAAAAAATTAAATGAAAAATAAGATTTAAATTTGTTGTCTAATCTAATCTTGTAAAAAACATTAATTAATTTGCTTTCCATTCTTAGGTTTAGAACTATGGACTTGATAGGTCACATGATCTTGAAAACCATATTATGTGAGCACAAACTTACATCCATAGTGATTATTCTTGGATTGTCAAATGAAAGGTCTATCGGATGTAAACTAATTGTCATGGGAAGTTGCATCATGGGCATAAGTGTGCACTTCATGTTCAACTAAATCATTAGGATGTTGAAGCACAATCATCTTCTTGTTGAACAGAATCATCTTCCTATTGAACTCACCTCTATTCAAATGTTCGACTTAGTATATGGCTACAAGGTTTTCTTGAGACCTTATATCAGTTATATTCATGTTGGTCATTTTATTCTGGAAAAAAATGAAAAAAAGTTAAGGATGTCTAATTATAACTAATCATAAACATAACAAATATTTCTTATAAAATAATGATACAACGCTCCTGTTTTTGTAATGTAGCATTTGTTGATGTTGGAATACTACAATTTTTTGTATCGGAGCCCAACATTTTCACCCTCAGGATGGCCTCCCCTATTAATAAAATGACATTGATTTTTCCATCTGCCTATTTGATTAGCCAAATGACTTACCCAATCTCCTTAGCACGTGACACGTGGGTCGAACTTCTCCAACCGTGTGACAACATGATTTACACTCGATCATGGTCAACCTTAAGGGAACTCAAGTCCTAATCTACTTTTTGTTTGACACTTTGAAGCTTCGTCGAACCTTGGACGAGGTTCTTTTCATCCTCAACTGAACTTAACTCATGCAAAATTGAACTTCATTCGGCATACATGTTGCTCATACATGCATTTTCCCTCATATGCCACTCGAGCCGACTTGCCTCTACTCTAGGCTAAGTTTAAGGCTCAACCTTATCCATACACTAGGTTAAGATCATCACAATTCAACGTCACATCAATCTTCATCATCTTGGTTCCTAACAACATGGCCCCCATGCTTTTTATATCACTTTGAAACTTCACCAGAGTGAATTCGTGTAGGATCTAGTGGCAACACTAGGGGATAAAAAGATTGTCTACCAATTTTAACTTTAAAAATCTTATTAATCTAAATGTGACAGCTAAACTTAAATCTTAATTAATTTAAGAAAATAATACCAAGCAACCAATTCAAGTTAATAGCTAATATCACAATGATGCAAAACACCAAATCAATTCTAACATGCAATCTAAAAATTAAAAAAGAAATTAAGTACAAAAAATAAAAGGAGTTTAGGAAAAAGAAGACACTGAAATTTATAGTGGTTCGGCAATTTGCCTACGTCCACTCTCAAAGACTCCTTTTTAGTTATTTTACTGAGAAAAGTTATCTTATGGGTGAGAACAAAACCCATAAGATAGCTCACAAAGGATTAACAAGGACCAAAGTTTTGAAAGAATAATTTGAATTGTTCAAATTAGATTAGGGAAACATATATTGTATATGATATGGTTAATACAAAATATAATGTATATAGACACATTATTATATAGTTAATTATGAATATGATTCAAATTTAAACTATATTATATAGGAGAATTAATGTATTTGAATTTGATTCAAATGTTAAATTAATATGAATAAGATTTATATTAAAACTATAGATTATATATTAATATGAATGAGATTCATATTAAAACTAGAGGTTAAGAGAGAAATATACATTTAAATATGATTCAAATCTTTAATTAATTAATTACTAACTCCCTCCTAATGAAAGGGGAGTTAATCCTCTTCTTTGAAGTAAAGGTCACACAAAAGTTCTATGAAGAAAAATCATTAATTTTTTTTCCTTCAGTATTCTCTCTCTTAAGAATTTTGTAG

mRNA sequence

ATGAACAAAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACAAGTTCCTGGATAACAAGCCTAAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGATCGTGACCTTGATACGGAGCTGGAGCTTCTAACTATGATGAATGCGTTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTATATTCTCTCTCTTAAGAATTTTGTAG

Coding sequence (CDS)

ATGAACAAAAAACCCTTTTCGCTCCGCTTAGCCCTATCCCCCTCTAGGGGTATTTTAGTGATAGGTTCTATAGGAACTGGACGATCCTATTTGGTCAAATACCTAGCGACAAACTCCTATCTTCCTTTCATTACAGTATTTCTGAACAAGTTCCTGGATAACAAGCCTAAGGGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGATCGTGACCTTGATACGGAGCTGGAGCTTCTAACTATGATGAATGCGTTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCGAATTAGCAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTCCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTATATTCTCTCTCTTAAGAATTTTGTAG

Protein sequence

MNKKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSIIFSLLRIL

Homology

[Close]

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-125
Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGFLIDD
Sbjct: 1616 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDD 1675

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
              DI+DS DI+DSD+IDRDLDTELELLT MNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1676 I-DIEDSDDIEDSDNIDRDLDTELELLTRMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1735

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCST+NILVIASTHIPQKVDPALIAPNKL
Sbjct: 1736 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTQNILVIASTHIPQKVDPALIAPNKL 1795

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1796 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1855

Query: 244  I 245
            I
Sbjct: 1856 I 1855

[Close]

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.5e-125
Identity = 233/241 (96.68%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALS SRGILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGFLIDD
Sbjct: 1626 KPFSLRLALSLSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDD 1685

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SD      DIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1686 SD------DIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1745

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1746 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1805

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1806 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1860

Query: 244  I 245
            I
Sbjct: 1866 I 1860

[Close]

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.5e-125
Identity = 235/252 (93.25%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGFL DD
Sbjct: 1624 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLFDD 1683

Query: 64   -----------SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQ 123
                       SDDID S DID SDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQ
Sbjct: 1684 IDIDDSDDIDASDDIDASDDIDASDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQ 1743

Query: 124  FELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQK 183
            FELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQK
Sbjct: 1744 FELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQK 1803

Query: 184  VDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVR 243
            VDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSN R
Sbjct: 1804 VDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNAR 1863

Query: 244  DLVALTNEALSI 245
            DLVALTNEALSI
Sbjct: 1864 DLVALTNEALSI 1875

[Close]

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-125
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
             DDIDDS DID SDDIDRDLDTELELLT MN LTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 RDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKH FTLSY+RGFHLEKKMFHT  FGS+TMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.2e-125
Identity = 230/241 (95.44%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGFLIDD
Sbjct: 1620 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFLIDD 1679

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
             DDIDDS DID SDDIDRDLDTELELLT MN LTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1680 RDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKAMSPCI 1739

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1740 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1799

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKH FTLSY+RGFHLEKKMFHT  FGS+TMGSNVRDLVALTNEALS
Sbjct: 1800 NTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALTNEALS 1859

Query: 244  I 245
            I
Sbjct: 1860 I 1860

[Close]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL
Match: A0A6M3RUH1 (Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL
Match: A0A410HFC5 (Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL
Match: A0A7G9IT80 (Protein Ycf2 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL
Match: A0A6H0ERQ9 (Protein Ycf2 OS=Hodgsonia heteroclita OX=386184 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1615 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1674

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1675 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1734

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1735 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1794

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1795 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1854

Query: 244  I 245
            I
Sbjct: 1855 I 1855

[Close]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL
Match: A0A6C0U8W2 (Protein Ycf2 OS=Siraitia siamensis OX=2695833 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. NCBI nr
Match: QIT04093.1 (Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX48604.1 hypothetical chloroplast RF21 [Luffa aegyptiaca] >QKX48623.1 hypothetical chloroplast RF21 [Luffa aegyptiaca])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. NCBI nr
Match: QJR53001.1 (hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical protein RF2 [Herpetospermum pedunculosum])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1619 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1678

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1679 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1738

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1739 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1798

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1799 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1858

Query: 244  I 245
            I
Sbjct: 1859 I 1859

[Close]

BLAST of Lsi09G010900 vs. NCBI nr
Match: YP_009751528.1 (Ycf2 protein [Thladiantha dubia] >YP_009751546.1 Ycf2 protein [Thladiantha dubia] >QIT04009.1 Ycf2 protein [Thladiantha dubia] >QIT04027.1 Ycf2 protein [Thladiantha dubia])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. NCBI nr
Match: YP_009751696.1 (Ycf2 protein [Hodgsonia heteroclita] >YP_009751714.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04429.1 Ycf2 protein [Hodgsonia heteroclita] >QIT04447.1 Ycf2 protein [Hodgsonia heteroclita])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1615 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1674

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1675 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1734

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1735 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1794

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1795 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1854

Query: 244  I 245
            I
Sbjct: 1855 I 1855

[Close]

BLAST of Lsi09G010900 vs. NCBI nr
Match: YP_009752286.1 (Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanthes baviensis] >QIT04260.1 Ycf2 protein [Trichosanthes baviensis] >QIT04277.1 Ycf2 protein [Trichosanthes baviensis])

HSP 1 Score: 471.9 bits (1213), Expect = 3.6e-129
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD
Sbjct: 1617 KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 1676

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
            SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI
Sbjct: 1677 SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 1736

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1737 IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1796

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS
Sbjct: 1797 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 1856

Query: 244  I 245
            I
Sbjct: 1857 I 1857

[Close]

BLAST of Lsi09G010900 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-121
Identity = 225/241 (93.36%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSR ILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGF IDD
Sbjct: 1630 KPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFFIDD 1689

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
              DIDDS DID S+DIDR+LDTELELLTMMNALTMDMM EIDRFYITLQFELAKAMSPCI
Sbjct: 1690 I-DIDDSDDIDASNDIDRELDTELELLTMMNALTMDMMLEIDRFYITLQFELAKAMSPCI 1749

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNES+YL+LGLLVN LSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1750 IWIPNIHDLDVNESSYLALGLLVNSLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1809

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGF SITMGS+ RDLVALTNEALS
Sbjct: 1810 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALS 1869

Query: 244  I 245
            I
Sbjct: 1870 I 1869

[Close]

BLAST of Lsi09G010900 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-121
Identity = 225/241 (93.36%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 4    KPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYLPFITVFLNKFLDNKPKGFLIDD 63
            KPFSLRLALSPSR ILVIGSIGTGRSYLVKYLATNSY+PFITVFLNKFLDNKPKGF IDD
Sbjct: 1630 KPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKGFFIDD 1689

Query: 64   SDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCI 123
              DIDDS DID S+DIDR+LDTELELLTMMNALTMDMM EIDRFYITLQFELAKAMSPCI
Sbjct: 1690 I-DIDDSDDIDASNDIDRELDTELELLTMMNALTMDMMLEIDRFYITLQFELAKAMSPCI 1749

Query: 124  IWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 183
            IWIPNIHDLDVNES+YL+LGLLVN LSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL
Sbjct: 1750 IWIPNIHDLDVNESSYLALGLLVNSLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKL 1809

Query: 184  NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALS 243
            NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGF SITMGS+ RDLVALTNEALS
Sbjct: 1810 NTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALS 1869

Query: 244  I 245
            I
Sbjct: 1870 I 1869

The following BLAST results are available for this feature:

BLAST of Lsi09G010900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT6	1.1e-125	96.27	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
Q09WV7	1.5e-125	96.68	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	1.5e-125	93.25	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
Q14F97	4.2e-125	95.44	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
A4GYV4	4.2e-125	95.44	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]

BLAST of Lsi09G010900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3RUH1	1.7e-129	100.00	Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1	[more]
A0A410HFC5	1.7e-129	100.00	Protein Ycf2 OS=Trichosanthes kirilowii OX=3677 GN=ycf2 PE=3 SV=1	[more]
A0A7G9IT80	1.7e-129	100.00	Protein Ycf2 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf2 PE=3 SV=1	[more]
A0A6H0ERQ9	1.7e-129	100.00	Protein Ycf2 OS=Hodgsonia heteroclita OX=386184 GN=ycf2 PE=3 SV=1	[more]
A0A6C0U8W2	1.7e-129	100.00	Protein Ycf2 OS=Siraitia siamensis OX=2695833 GN=ycf2 PE=3 SV=1	[more]

BLAST of Lsi09G010900 vs. NCBI nr


Match Name	E-value	Identity	Description
QIT04093.1	3.6e-129	100.00	Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX...	[more]
QJR53001.1	3.6e-129	100.00	hypothetical protein RF2 [Herpetospermum pedunculosum] >QJR53017.1 hypothetical ...	[more]
YP_009751528.1	3.6e-129	100.00	Ycf2 protein [Thladiantha dubia] >YP_009751546.1 Ycf2 protein [Thladiantha dubia...	[more]
YP_009751696.1	3.6e-129	100.00	Ycf2 protein [Hodgsonia heteroclita] >YP_009751714.1 Ycf2 protein [Hodgsonia het...	[more]
YP_009752286.1	3.6e-129	100.00	Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanth...	[more]

BLAST of Lsi09G010900 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	2.9e-121	93.36	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	2.9e-121	93.36	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 14..193 e-value: 6.3E-4 score: 29.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..190 e-value: 7.7E-18 score: 66.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..244
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 18..190 e-value: 4.9E-10 score: 39.9
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 4..245
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078:SF22	PROTEIN YCF2	coord: 4..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G010900.1	Lsi09G010900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity