Lsi09G009210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G009210
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Gibberellin regulated protein
Location	chr09: 11377348 .. 11377967 (+)
RNA-Seq Expression	Lsi09G009210
Synteny	Lsi09G009210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTTTTATTTCTTCAACAGGCTGGTTCAAACTTTCGTCCTTCAGGTACTTATCATAATCAATATTTTTCCTTGCTTTGTTGCAACATTTAATATTTCAAATGCATAGGTTAATCAAAAGGAATAACCTTGAATGTTCATATATAATATTATTGTTGAATTTGGATTTTTTTTCAATAAGTATGAGCACTTGGGATGCCTTTTGAAAGTATTACTTTTAAGTGAATCATTCTTTTTAATGAATATATTCATGGAAGAAACACAAGTTAAGTGCTTAACTAAGGCTTGAAATGAGTTTTGAGATTAGTAGTCTTGAGTAATACTTTGGATTTCTTAAACTAAACGAAACGAAAACGTTTGAAAGAATGTTCAAAAATATATTTGAAGTTTTTAAAAGTCATGTCAAACTCACTCTAAGGACACTTGTGAGAACAGATTGCAAGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCGTGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTACCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCTTGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGA

mRNA sequence

ATGGGCTGGTTCAAACTTTCGTCCTTCAGTCATGTCAAACTCACTCTAAGGACACTTGTGAGAACAGATTGCAAGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCGTGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTACCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCTTGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGA

Coding sequence (CDS)

ATGGGCTGGTTCAAACTTTCGTCCTTCAGTCATGTCAAACTCACTCTAAGGACACTTGTGAGAACAGATTGCAAGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCGTGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTACCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCTTGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGA

Protein sequence

MGWFKLSSFSHVKLTLRTLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

Homology

[Close]

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot
Match: P47926 (Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-31
Identity = 58/77 (75.32%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 6  LSSFSHVKLTLRTLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQV 65
          L +FS+V      L  TDCKPRC YRCSATSH+KPCMFFCQKCCA CLCVP G YGNKQ 
Sbjct: 20 LLTFSNVVEGYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQS 79

Query: 66 CPCYNNWKTQQGGPKCP 83
          CPCYNNWKTQ+G PKCP
Sbjct: 80 CPCYNNWKTQEGKPKCP 96

[Close]

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-29
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 23  DCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 82
           DC+P+C YRCS TS++KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYNNWKT++GGPKCP
Sbjct: 53  DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-27
Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 24  CKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 83
           C  +C  RCS T + KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Sbjct: 43  CGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.0e-27
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 23  DCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 82
           +C PRC  RCS T ++KPC+FFC KCC KCLCVPPGTYGNKQVCPCYNNWKT+ GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.6e-27
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 24 CKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 83
          C  +C++RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Sbjct: 39 CNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL
Match: A0A6J1CII9 (protein RSI-1-like OS=Momordica charantia OX=3673 GN=LOC111011811 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 TDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 81
          +DCKPRC+YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC
Sbjct: 32 SDCKPRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 91

Query: 82 P 83
          P
Sbjct: 92 P 92

[Close]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL
Match: A0A371EEK9 (Protein RSI-1 OS=Mucuna pruriens OX=157652 GN=RSI-1 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31
Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 6  LSSFSHVK---LTLRTLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGN 65
          L +FSHV    +   TL  +DCKPRC YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGN
Sbjct: 18 LVTFSHVAEAYVRSGTLRPSDCKPRCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGN 77

Query: 66 KQVCPCYNNWKTQQGGPKCP 83
          KQVCPCYN+WKT++GGPKCP
Sbjct: 78 KQVCPCYNSWKTKEGGPKCP 97

[Close]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL
Match: A0A1S3CD72 (protein RSI-1-like OS=Cucumis melo OX=3656 GN=LOC103499343 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 22 TDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 81
          +DCKP+C+YRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKC
Sbjct: 35 SDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC 94

Query: 82 P 83
          P
Sbjct: 95 P 95

[Close]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL
Match: I1MBW9 (Uncharacterized protein OS=Glycine max OX=3847 GN=100804750 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 18 TLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 77
          TL  +DCKPRC YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYN+WKT++G
Sbjct: 33 TLRPSDCKPRCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNSWKTKEG 92

Query: 78 GPKCP 83
          GPKCP
Sbjct: 93 GPKCP 97

[Close]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL
Match: A0A445H8Y2 (Protein RSI-1 OS=Glycine soja OX=3848 GN=D0Y65_039437 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 18 TLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 77
          TL  +DCKPRC YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYN+WKT++G
Sbjct: 33 TLRPSDCKPRCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNSWKTKEG 92

Query: 78 GPKCP 83
          GPKCP
Sbjct: 93 GPKCP 97

[Close]

BLAST of Lsi09G009210 vs. NCBI nr
Match: XP_038876048.1 (protein RSI-1-like [Benincasa hispida])

HSP 1 Score: 151.0 bits (380), Expect = 4.5e-33
Identity = 64/79 (81.01%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 4  FKLSSFSHVKLTLRTLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNK 63
          F L+S  H+      L  +DCKP+CNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNK
Sbjct: 20 FFLTSSLHLAEAASNLRPSDCKPKCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNK 79

Query: 64 QVCPCYNNWKTQQGGPKCP 83
          QVCPCYNNWKTQQGGPKCP
Sbjct: 80 QVCPCYNNWKTQQGGPKCP 98

[Close]

BLAST of Lsi09G009210 vs. NCBI nr
Match: XP_022141399.1 (protein RSI-1-like [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 22 TDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 81
          +DCKPRC+YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC
Sbjct: 32 SDCKPRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 91

Query: 82 P 83
          P
Sbjct: 92 P 92

[Close]

BLAST of Lsi09G009210 vs. NCBI nr
Match: RDX64471.1 (Protein RSI-1 [Mucuna pruriens])

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-31
Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 0


Query: 6  LSSFSHVK---LTLRTLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGN 65
          L +FSHV    +   TL  +DCKPRC YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGN
Sbjct: 18 LVTFSHVAEAYVRSGTLRPSDCKPRCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGN 77

Query: 66 KQVCPCYNNWKTQQGGPKCP 83
          KQVCPCYN+WKT++GGPKCP
Sbjct: 78 KQVCPCYNSWKTKEGGPKCP 97

[Close]

BLAST of Lsi09G009210 vs. NCBI nr
Match: XP_008460555.1 (PREDICTED: protein RSI-1-like [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 22 TDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC 81
          +DCKP+C+YRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQ CPCYNNWKTQQGGPKC
Sbjct: 35 SDCKPKCSYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQECPCYNNWKTQQGGPKC 94

Query: 82 P 83
          P
Sbjct: 95 P 95

[Close]

BLAST of Lsi09G009210 vs. NCBI nr
Match: XP_003544991.1 (protein RSI-1 [Glycine max] >XP_028201221.1 protein RSI-1-like [Glycine soja] >KAG4955169.1 hypothetical protein JHK87_040763 [Glycine soja] >KAG4964066.1 hypothetical protein JHK86_040934 [Glycine max] >KAG4966570.1 hypothetical protein JHK85_041545 [Glycine max] >KAG5122804.1 hypothetical protein JHK84_041144 [Glycine max] >KHN39454.1 Protein RSI-1 [Glycine soja])

HSP 1 Score: 141.7 bits (356), Expect = 2.7e-30
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 18 TLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQG 77
          TL  +DCKPRC YRCSATSH+KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYN+WKT++G
Sbjct: 33 TLRPSDCKPRCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNSWKTKEG 92

Query: 78 GPKCP 83
          GPKCP
Sbjct: 93 GPKCP 97

[Close]

BLAST of Lsi09G009210 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 123.6 bits (309), Expect = 7.2e-29
Identity = 50/59 (84.75%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 24  CKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 83
           C  +C  RCS T + KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Sbjct: 43  CGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Lsi09G009210 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.6e-28
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 23  DCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 82
           +C PRC  RCS T ++KPC+FFC KCC KCLCVPPGTYGNKQVCPCYNNWKT+ GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Lsi09G009210 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 120.9 bits (302), Expect = 4.7e-28
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 24 CKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 83
          C  +C++RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Sbjct: 39 CNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of Lsi09G009210 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 117.5 bits (293), Expect = 5.2e-27
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 23  DCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 82
           +C   C YRCSATSHRKPC+FFC KCC KCLCVP GTYG+K+ CPCYNNW T++GGPKCP
Sbjct: 47  ECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Lsi09G009210 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-25
Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 7   SSFSHVKLTLR-----TLVRTDCKPRCNYRCSATSHRKPCMFFCQKCCAKCLCVPPGTYG 66
           SS S+VK + +     +L RT C   C+ RC  T + K C+ FC KCC KCLCVPPG YG
Sbjct: 26  SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYG 85

Query: 67  NKQVCPCYNNWKTQQGGPKCP 83
           NKQVC CYNNWKTQ+GGPKCP
Sbjct: 86  NKQVCSCYNNWKTQEGGPKCP 106

The following BLAST results are available for this feature:

BLAST of Lsi09G009210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P47926	2.0e-31	75.32	Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1	[more]
P27057	2.4e-29	83.33	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]
Q6NMQ7	1.0e-27	84.75	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
A8MR46	5.0e-27	78.33	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ...	[more]
Q84J95	6.6e-27	77.97	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]

BLAST of Lsi09G009210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CII9	1.2e-31	95.08	protein RSI-1-like OS=Momordica charantia OX=3673 GN=LOC111011811 PE=3 SV=1	[more]
A0A371EEK9	2.0e-31	77.50	Protein RSI-1 OS=Mucuna pruriens OX=157652 GN=RSI-1 PE=3 SV=1	[more]
A0A1S3CD72	6.0e-31	93.44	protein RSI-1-like OS=Cucumis melo OX=3656 GN=LOC103499343 PE=3 SV=1	[more]
I1MBW9	1.3e-30	87.69	Uncharacterized protein OS=Glycine max OX=3847 GN=100804750 PE=3 SV=1	[more]
A0A445H8Y2	1.3e-30	87.69	Protein RSI-1 OS=Glycine soja OX=3848 GN=D0Y65_039437 PE=3 SV=1	[more]

BLAST of Lsi09G009210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876048.1	4.5e-33	81.01	protein RSI-1-like [Benincasa hispida]	[more]
XP_022141399.1	2.5e-31	95.08	protein RSI-1-like [Momordica charantia]	[more]
RDX64471.1	4.2e-31	77.50	Protein RSI-1 [Mucuna pruriens]	[more]
XP_008460555.1	1.2e-30	93.44	PREDICTED: protein RSI-1-like [Cucumis melo]	[more]
XP_003544991.1	2.7e-30	87.69	protein RSI-1 [Glycine max] >XP_028201221.1 protein RSI-1-like [Glycine soja] >K...	[more]

BLAST of Lsi09G009210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74670.1	7.2e-29	84.75	Gibberellin-regulated family protein	[more]
AT3G10185.1	3.6e-28	78.33	Gibberellin-regulated family protein	[more]
AT3G02885.1	4.7e-28	77.97	GAST1 protein homolog 5	[more]
AT2G30810.1	5.2e-27	75.00	Gibberellin-regulated family protein	[more]
AT5G15230.1	3.7e-25	60.49	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 23..82 e-value: 7.8E-24 score: 83.6
None	No IPR available	PANTHER	PTHR23201:SF77	PROTEIN GAST1	coord: 15..82
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 15..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G009210.1	Lsi09G009210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane