Lsi09G008780 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATTCTAGTCGTAGAACAAAGTTACCTTCGCTGCCAATTCTCATGGGTTTTCTTCTATTTTTCACTCATTTTGCTTCATTTCTCCGCTAGATCTTCTCCACAAAACCCTCCTATCTTGCTTTCTGCTCTTTCTTCAGCTCTCTCCCTAAGAATTTCTTCACCCCTCCAAATGGAATTGTAATACGTGAGATCGTTCTTGATAGTCCCATAAGATGGGAGTGCTGTCAAATAAGATTTTGAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGTTTCTTCTCCTTCTCTTTCTTCTCGATTTCTTATTTTTTGATTTTGTTCTAATTTGGGCATAGTTTTCCTTTACCCTTTTGCATTTTGTATCCATTTCTTATGCTCTGGTTTGCCCTCAATTGCGTAACTGCATTCTGGAATCACTACCCATGATTGCTGTATTGTTTTTCTTTGATGGGCATTTTGATTTTCTTTTAGAAATTGTCATTTCATCGTCGTTTGTGTGGTTTGAAAGTTAATCGGATATAGATTTGGGGATTATTCTTGAACTATGGGTGGTGTTGGCTATAATTTATGCTAATGTCTTTGATTATGAATTTCGACTCGTGAATAGATTATATAAATCTGAAGAGATTGAATTCCCATTGCTCTGCTGACTTTCCAATGGAGTTGCTTATGAATTAAGGAAAGTGAAAAATCCCCTGAATGAAGTGACTCAAATGGAGGATCTCTTATTCACCTTTGGCTACTTGATTTTGTTTTCTTTCCACTTTTACGAGCAGGGCGAATCATTTCCTTTTTATTTATAAGAGGGGCAGAATTTTATGCTGTAACTTTTTGTGTATAAAATGTTTGAACCCACAAAATTTAGAGGGAGATGTAGATGAAAAGCTATAAAATGTAGCCTTTATGTTCAAGTTTTAAATCAAAGATAAATTAGGAGTAATTACTCCCTCTTTCCAAGTTTTTTCTTTCCCTTACGGTCTCCCTCCATTTACCATAAATGAAATTTTATATTGTTATTCCTAAGTTCCGTGTCTTTGGGCTTGATCAATACCTTATCTTCTATGTCTTTCTTTGTTGTGTAGTATTAAATTTTTTTCTCTAGTAATAAAATTAACACGTTTATATCCGGGTATGTTCTCCTGTGAACAAATTGGGAAAGTGATGGATGATAGTGCTATGATCGAGAGTGTACTGGTTATATAAGTTATTAGTTATTACCCACTTCATAGAGGCAATAGTTTGGTGATTGTATGTATTTATGCTGATATGACTTATGTGTTTGGTCTGAATCCTGTTTGCTCTACATCTCAAATTCTTTGTAAATGGCATTCAAAGTCTGCCTTTTCTGCTGCTGGGGTCCAGCTTCTTTTTGGTTGATATATAGAATTATTCATCCCTTTTCACAGATTTGTGCATAATTGGCCTTCCACTTAGTGATGAAATTGTATATTCTTGACATCATGGAGAAATTTATTTATTCGCTGGACAGTGACATCGAACATTCTTTCTAGGTCGGGAGGCCACGCGATTCCATTACTTAGATGTTTGAAATGGGTTTGAAAGCTATCAGATAATGGTTTTCCTAATGTGTGTTTTGAGGTTATCTTTTCTAATGAATGTGTATTTGCTCTTTCTTTTGAGAGGGAAAGTGGATGAGGCAGAGGAGGTTTTTTTCTCTTAATCTGTTGTTGCATGTTAATCAAGTATCATAGAGGAGTTCCTTGAGAATATGAAAAGGTGTGGAAAAATATCGTTCTTAAGTGACTCATTGATTCCAGTTATCAGTAGAAGTCTCTCTTTGCTACAACTTTTATAAGTAATAAATTCTGAATGATGATAATTGTCATTTTGACTTATCTACTTATATTACTCCAGGGATTTTTATTGGTGATGGAAAGGTGATACACTTCACTCGAGGAGGAGGTTTGGAGATTGGCTCGGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCAAATAGTGATGGTGTAATCTGTTCGTGTTTGGACTGTTTTCTTGGTGGTGGCGATCTTTACATCTTTGAATATGCTGTCTCGCCTGCGTTGTTTCTCGCAAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCCGATTCATCTGAAGTTGTCCTTTATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACTCTCAGCGTCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATTTTTAACCACCAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGTGCTAGTCGATTTGTTTCTGACATTGGAGTGCGTCGTGATGTTGTTAAAATCCCGGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTTCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAGTGTTGAGTAGTGTTGTTGTTGGCTTCAACTAAACCATAGAATTGTCTTGAAAGTGAAATCCATTCTTAATTATGGACATGGTTGAAACTTGTATCAAGTATGTATTTGTTGTGATTTGTATCCACATTGTTGAAACTTGGAACAGAACTAAGGGAGTGTTTAAGGCACATGCTGGTTTTATTATAGTAAGTGGTTATTATATCTATGGGTTATAATAGTTTGTAGGTTATAATAGTTGGTGTTTGGGATGTAGACTATTTTAGTTTGAACTATAGTAATATGTGTTTAGGGGGCAGACGAATAGAAAAT ATTAATTCTAGTCGTAGAACAAAGTTACCTTCGCTGCCAATTCTCATGGGTTTTCTTCTATTTTTCACTCATTTTGCTTCATTTCTCCGCTAGATCTTCTCCACAAAACCCTCCTATCTTGCTTTCTGCTCTTTCTTCAGCTCTCTCCCTAAGAATTTCTTCACCCCTCCAAATGGAATTGTAATACGTGAGATCGTTCTTGATAGTCCCATAAGATGGGAGTGCTGTCAAATAAGATTTTGAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAGGTGATACACTTCACTCGAGGAGGAGGTTTGGAGATTGGCTCGGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCAAATAGTGATGGTGTAATCTGTTCGTGTTTGGACTGTTTTCTTGGTGGTGGCGATCTTTACATCTTTGAATATGCTGTCTCGCCTGCGTTGTTTCTCGCAAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCCGATTCATCTGAAGTTGTCCTTTATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACTCTCAGCGTCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATTTTTAACCACCAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGTGCTAGTCGATTTGTTTCTGACATTGGAGTGCGTCGTGATGTTGTTAAAATCCCGGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTTCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAGTGTTGAGTAGTGTTGTTGTTGGCTTCAACTAAACCATAGAATTGTCTTGAAAGTGAAATCCATTCTTAATTATGGACATGGTTGAAACTTGTATCAAGTATGTATTTGTTGTGATTTGTATCCACATTGTTGAAACTTGGAACAGAACTAAGGGAGTGTTTAAGGCACATGCTGGTTTTATTATAGTAAGTGGTTATTATATCTATGGGTTATAATAGTTTGTAGGTTATAATAGTTGGTGTTTGGGATGTAGACTATTTTAGTTTGAACTATAGTAATATGTGTTTAGGGGGCAGACGAATAGAAAAT ATGGGAGTGCTGTCAAATAAGATTTTGAGGGAGGAATTGAAACCGGGGGATCACATCTATTCTTGGAGGCAGGCCTATATTTATGCTCATCACGGGATTTTTATTGGTGATGGAAAGGTGATACACTTCACTCGAGGAGGAGGTTTGGAGATTGGCTCGGGAACGGTATTAGACCGATTCCTTGTTAGTTCATCTACTCATTCTCCAGACAATCCATGTCCTGTATGTGGTGATCAGTCAAATAGTGATGGTGTAATCTGTTCGTGTTTGGACTGTTTTCTTGGTGGTGGCGATCTTTACATCTTTGAATATGCTGTCTCGCCTGCGTTGTTTCTCGCAAAAGCCCGTGGCGGGACTTGCACTCTTGCTTCTTCCGATTCATCTGAAGTTGTCCTTTATCGTGCTTCTTTTCTCCTCCAAAATGGCTTTGGTATGTACCACATCTTCAAGAACAACTGTGAAGACTTTGCCATCTATTGTAAAACAGGATTGCTTGTTTACACCACTCTCAGCGTCGGTAGGAGCGGGCAGGCTGCATCATTTCTTGCGGCCACAAGTGCAATTGTTTCTTCCCCACTTCGATTTTTAACCACCAGTTGTAGTGGTCTAGCGCTTGTTGGTGTGGGTATGTATTGTGCTAGTCGATTTGTTTCTGACATTGGAGTGCGTCGTGATGTTGTTAAAATCCCGGTCGAGGAACTCGTGGCTAGAGTTAGCAGCAGCAATGCTTCAGAGGAAGCAACACAGACGGCCAAGGAAGAGTAG MGVLSNKILREELKPGDHIYSWRQAYIYAHHGIFIGDGKVIHFTRGGGLEIGSGTVLDRFLVSSSTHSPDNPCPVCGDQSNSDGVICSCLDCFLGGGDLYIFEYAVSPALFLAKARGGTCTLASSDSSEVVLYRASFLLQNGFGMYHIFKNNCEDFAIYCKTGLLVYTTLSVGRSGQAASFLAATSAIVSSPLRFLTTSCSGLALVGVGMYCASRFVSDIGVRRDVVKIPVEELVARVSSSNASEEATQTAKEE Homology
BLAST of Lsi09G008780 vs. ExPASy Swiss-Prot
Match: Q93V51 (Protein LEAD-SENSITIVE 1 OS=Arabidopsis thaliana OX=3702 GN=PSE1 PE=2 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.5e-77 Identity = 142/241 (58.92%), Postives = 179/241 (74.27%), Query Frame = 0
BLAST of Lsi09G008780 vs. ExPASy TrEMBL
Match: A0A5A7VDH9 (LRAT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002440 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128 Identity = 235/254 (92.52%), Postives = 240/254 (94.49%), Query Frame = 0
BLAST of Lsi09G008780 vs. ExPASy TrEMBL
Match: A0A1S3CII0 (uncharacterized protein LOC103501354 OS=Cucumis melo OX=3656 GN=LOC103501354 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 1.5e-128 Identity = 235/254 (92.52%), Postives = 240/254 (94.49%), Query Frame = 0
BLAST of Lsi09G008780 vs. ExPASy TrEMBL
Match: A0A6J1FI06 (uncharacterized protein LOC111445514 OS=Cucurbita moschata OX=3662 GN=LOC111445514 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 4.7e-127 Identity = 228/255 (89.41%), Postives = 243/255 (95.29%), Query Frame = 0
BLAST of Lsi09G008780 vs. ExPASy TrEMBL
Match: A0A0A0KMS7 (LRAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G315380 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126 Identity = 230/254 (90.55%), Postives = 238/254 (93.70%), Query Frame = 0
BLAST of Lsi09G008780 vs. ExPASy TrEMBL
Match: A0A6J1K374 (uncharacterized protein LOC111489658 OS=Cucurbita maxima OX=3661 GN=LOC111489658 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126 Identity = 227/255 (89.02%), Postives = 243/255 (95.29%), Query Frame = 0
BLAST of Lsi09G008780 vs. NCBI nr
Match: XP_038877070.1 (uncharacterized protein LOC120069399 [Benincasa hispida]) HSP 1 Score: 477.6 bits (1228), Expect = 6.5e-131 Identity = 240/254 (94.49%), Postives = 243/254 (95.67%), Query Frame = 0
BLAST of Lsi09G008780 vs. NCBI nr
Match: KAA0066223.1 (LRAT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 469.2 bits (1206), Expect = 2.3e-128 Identity = 235/254 (92.52%), Postives = 240/254 (94.49%), Query Frame = 0
BLAST of Lsi09G008780 vs. NCBI nr
Match: XP_008463130.1 (PREDICTED: uncharacterized protein LOC103501354 [Cucumis melo]) HSP 1 Score: 468.8 bits (1205), Expect = 3.0e-128 Identity = 235/254 (92.52%), Postives = 240/254 (94.49%), Query Frame = 0
BLAST of Lsi09G008780 vs. NCBI nr
Match: XP_022939709.1 (uncharacterized protein LOC111445514 [Cucurbita moschata]) HSP 1 Score: 463.8 bits (1192), Expect = 9.7e-127 Identity = 228/255 (89.41%), Postives = 243/255 (95.29%), Query Frame = 0
BLAST of Lsi09G008780 vs. NCBI nr
Match: KAG6579059.1 (hypothetical protein SDJN03_23507, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 463.8 bits (1192), Expect = 9.7e-127 Identity = 228/255 (89.41%), Postives = 243/255 (95.29%), Query Frame = 0
BLAST of Lsi09G008780 vs. TAIR 10
Match: AT3G02700.1 (NC domain-containing protein-related ) HSP 1 Score: 343.2 bits (879), Expect = 1.8e-94 Identity = 170/252 (67.46%), Postives = 201/252 (79.76%), Query Frame = 0
BLAST of Lsi09G008780 vs. TAIR 10
Match: AT5G06370.1 (NC domain-containing protein-related ) HSP 1 Score: 290.8 bits (743), Expect = 1.1e-78 Identity = 142/241 (58.92%), Postives = 179/241 (74.27%), Query Frame = 0
BLAST of Lsi09G008780 vs. TAIR 10
Match: AT5G16360.1 (NC domain-containing protein-related ) HSP 1 Score: 268.1 bits (684), Expect = 7.3e-72 Identity = 145/273 (53.11%), Postives = 178/273 (65.20%), Query Frame = 0
BLAST of Lsi09G008780 vs. TAIR 10
Match: AT5G16330.1 (NC domain-containing protein-related ) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-69 Identity = 134/246 (54.47%), Postives = 167/246 (67.89%), Query Frame = 0
BLAST of Lsi09G008780 vs. TAIR 10
Match: AT1G01225.1 (NC domain-containing protein-related ) HSP 1 Score: 257.7 bits (657), Expect = 9.9e-69 Identity = 133/258 (51.55%), Postives = 172/258 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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