Lsi09G008770 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi09G008770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Auxin response factor
Location	chr09: 10219872 .. 10224824 (-)
RNA-Seq Expression	Lsi09G008770
Synteny	Lsi09G008770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGAAACCACCACTCATTAGTAACTTTCGCCAACTGCCACCAATTGTCAGTGATCGATACTGTTGATAACGATCACTTCGACAATGGTCAATGGTCACCGATTGAAACTGGAGAATCGTTGACTGGCGATTGGCATGGTTGGTATCATGATCGGAGATTGGTGACTAGCCAGCACTTTGTCGATGGATAGGTGGTGACCGAAACTGATATCAGTTTTCAGGGTTGCGAACCGATGATCGAAAACCACCACTCATTAGCAACTATCACTAGCCGTTGCTAATTGTAGGCGATCGAGACTAGTGACAACGATCACTCCGACAATGGTCAGTGATTGCCAATTGTTGGTCCCCCACTTCAAGTCCCGCCTAGTGACTAAGACAAAGGGATCAGTGACATGCAACCATTCTAACAACTACAATTGAATGGTCGAGATTGACAATTGACAATGCACCATATGTCAACAACTATTATCGATAACCACCCACCATCACCTATTGTGACTAACGATTGGGACGAGGACTAAAAGCAAAGACTAGTAGTCGTTAGTCATTAGTTTTGATCACCATGCATTGATCTTCTATCACTAATTTCAATTGCTGGTTACGGTCCCATTCTTGATGGCCCAAGTGTTAGATGGTCACGCATCATCAGTCCCAATTGATGGTTCCTGCATCTTCCAGTTTGTGTTTCTTAATCTAATGCTTCCTACAATAGTTTTAATATACAGTAGGCATTACAATATACATTATAGTTTTTTTCCATGACTTCACATATTTCACTTTCTAACACATTTAACTATCTATTTGACTCTTTTTAAGTATAAAATAAAAAATAAAATAAAAAACAGTTACCAAACATGTTTAATTTAATTTTTTTAAGAAATAAAAAATAAAAATCTAGATATCAAACACATAAGATTTTTATTTTTTTTTTAAATTTTTAATTTTAAGTTTTCAAACTTGGTTTGGTTCTTAAAAGCACTCTTGAAAAGTAGATAACAAAAACAAAGAAATAAATAGGTAGAAGTAGTGTTTATAAACCTAATTAACAAACAAAGTCTAAATCTAAGTACTCTTTTCATTGTCTGGATAAGTTTCTAAAAAAAAAAAAATCCCTAAATGAATTCATATTGACATTACCAACTTAAATTATGTTTATACATCTTCAAACATAATCAATCAATGAAAAAAAGAAAATAGAAGACTTACCTCATTACGATCGATTATGTTTACCATACATTGTAATAGAATCAATTGTGAGTTCCACTCCTACATTTGTAATCATATCCCGTAATTCCATTACACTAAAAATGGTTATCAATATCATTTCCATAGACTATCACGTGGAACTCACACCACTTCTATTACATTTTAATTAACTATATATTTATTAAAAATATTATAGTAATCATCTATATTTAATTGTGATATAAATGTTTCTAATGAGCACTAAACACCATCGAATAAATTAAATTTTATTTCCTTTAATTTTGATTATAATTTCATCAAATTTTTATTACAGTACATAAATAGGACCTTTAAATATAATGTGGAATATTCAACACAAAAGAAAACTGTTTTATTTTAAAATTAGATTAGAGGTGTAAACAACTAAAAAAAGAATGGGCCATGGAGGAACTTGCCTCGAATGAGACGAGGATTCTTATGAGGTTGAAGATTTTATCTTTCTTTTTTATTTTCTATTTTATTTTTGAAGCAATTACCTTTCTTATTTTAATTTTGAACTTGATCTCTTCTCTCTCTCCAACCTAAAATATATATATATATATATAAACATGGAAAATTCTTAAAAATAGAAAAGTAAAGAAAATTATTTATATAAAATAACAAATTTTTTATATAATTATGATAGATGCGGATAAAAGTCTATCAGGATCTATCAGTGATAGAAACTTATCTTATCACTGATAGATGTTGATAGAAATCTATTAATGTCTATCATTATTTTTTTTTCTATTTTCTGTAAATAATTTGACATTCTTCTTATCTGTAAAAATTTTCCTATAAACATAATTTTTTAATACATCATAACTATATTTCAATACAAATTTCCATAAATTTGTGTGCATATTGCATATTCAAACGCAAAAAAAATTTAACAAAAAAAAAAAAATACAATGCCCGCTGATCCTTGCATCAAACTTGTTCATCACAAATCATTTACAACCTAGAAATCCAAATTTGGTTCATCACTCCTTTTATAAAAAATTTATTTCAAACATGTTACCAAACAAAGATGGAGATGAAAAAAAATGATATCCATATATCAATTTCATCTTGATAACGACACATCTAACTCTCATCTCGACAATGACATATCTAACTCTTTTCTATTTTAAAGAAAAATAAAAAATTAACTAGATTTTAAAAAAAAAAATCAACGCGTAGGTGTAACTCAATTAAAAAAAACAGAAACTAAAATTGAAAATTTTCTCCTACCTTTTGAAAGTGTGGCAACTAAAACCAAACCAAAGATATTTTAACAAACAGGAAATTAAAAAAAAAAAGAAAATAATGTGTAAAAAAAGAGAGAGAGAAAAAGAAAAGAAATCTTGAAAGTTAAAAATGAAAAATGGGAAAAAAAATGGAAAAAAAGAGAAAATGTGATTATTTAACATAATCCGTACTTCTGACAAGGACCACTGGAGGATGGTGGCACATGCCTGCTGTCAAATCAAAAGGGGAATGGACGGTGAGGATTAAAAGGTACGGAGAGATGAAGGGTTGTGATTGCGTCGTCCTAAATTAGTATCTCCTGGACTCCATTTCTCTTTTTTCGTTTTAGATTTTCTCTTTTTTCTCACTCTTAAAACACTTAAACTTACCATTTTTCTCTCTCACAGACACTGCCTTGACCGTGCTTTCTCTCTCCTCTGTCTCTGTCTTTTCTTTCTCTCTCATCTTTCAGTTTTTTTTTTGAAGAGAAGCCCTCTTTGAAATCACTTCTTCTCTTTTACTCTCTCTCTCTCTCTCTTTTTTTTTTGCTCTCTGTATGTATATGTACTGACTGACATTCTCAGTCAGTCCGATTGTGGTACCGGCTTACTCTAAAATTGTTTGTCAGTGGGGGTTTTTTTTGGGGTTTAATTCATCTCATCTTTCTCAGTTTCCCCACTTGATTGTTGTTCGCTTTCGTTGGTTTTTTTTGTTGTTTCTCTCTAGAGGGATCTAGTACGGATTGGCCTTTTGATGTGTGGGTTGAGGTTTGAATTTGTTTGGTTTGAGTGTTTTTGTGGGAAGTTTGTTTGAGGGGTTGGAGGGAGGGAGGGAAGGGGGTTTGATTTTAGGGGATTTTGTGCTTAAACCCTAAAAACACTCTGTATTTGAGAGGATGGATATTGGGTTGGTTTGATTTGGGGCGGGGGAGATGGGAGAGCGCGGTGGGGTTGTGAGTGATTGCGTTGGGTTTAGGCAGCGGAGGAATCTTCTTAATGTTATCGGTTGAAAGTTATGAGTTTCAGGCAGGGTTCTTGTCCTGTCGATTAGGGTTTTACTATTCTTTTTATTTTGAATTTTTGTGTGTTTGTTGTGTGTGTGGTTTGAGTCATTTTTTAAGTATAGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGTATGATTTGCTATCCTTTTCTTTGCTTTTTTATGTTGGTTTTGTTTTGGTCTACTGTTTCAATTTGGGACGAAGGAAATCCTGTTTTGAATTGTTATGTTATTATTATTATGTGCCTTTTTTCATTTTTGTTGTTTGTTTTTCCTCCCTTTATTAAATGCTATGGTTCCCTCATCTCCCGCCATAAATTTTGATCTTCTGTGCTGAACTTTAATTATGGCGCTGTAATGATGGTGATGATTATAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTCCATGGTTTTTTCTTTTTTTCTTTTTTAGTTTGAAAATATATTTTTCCATTTTTGCGGCTATCTTTGTCCTTTTAATTTATTTCTTTGTATGTAGAAAAGTTGAGAAATGCCTTAATTAAACTAGTCGTCATTGCATAGGCCTGTGGAAATGAAAGGACTTTTATGTTGATTGTTTGTCTGTAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGCCAACTTCACAACGTTACAATGCATGTGGGTTCTCTAATTTTCATGTAATTTGAGTGTGTCTAGCCTTCATTGCATGATTAATGTTTTTAATGCGTAAATATTTCATTAATCTCTTATTAACCATGAATGAGGAAATTAGATTAATTAAGCAAGGAGAAGTTTTAAGCAGGATTTGTATGTGTGACATTTCAGGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCATTGACTGCAGTATAATATCTTTCCAACTCTGTTTCTCTTTCAGTTCTTCTTGCCACATTTATTAATACCTCATCTCAATTTATTTTGTACATTCAGCAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCAAGTAGACAGCCAACAAATTACTTTTGCAAGACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGTACATACATATATTCTGTTATATGATTTTGTTGGATTTGATGGATGACTTTTGCCATCTTTCTCTGGTATGGTGCTGCAGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTTGAATGGAAGTTTAGGCATATTTTTCGAGGTCAGTCCCTTGATGTTCTGTCCATTTGA

mRNA sequence

ATGATCGGAAACCACCACTCATTAGTAACTTTCGCCAACTGCCACCAATTGTCAGTGATCGATACTGTTGATAACGATCACTTCGACAATGGTCAATGGTCACCGATTGAAACTGGAGAATCGTTGACTGGCGATTGGCATGGTTGGTATCATGATCGGAGATTGGCGATCGAGACTAGTGACAACGATCACTCCGACAATGTCAGTCCGATTGTGGTACCGGCTTACTCTAAAATTGTTTGTCAGTGGGGGTTTTTTTTGGGGTTTAATTCATCTCATCTTTCTCAGTTTCCCCACTTGATTGTTGTTCGCTTTCGTTGGTTTTTTTTGTTGTTTCTCTCTAGAGGGATCTACGGAGGAATCTTCTTAATGTTATCGGTTGAAAGTTATGAGTTTCAGGCAGGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGCCAACTTCACAACGTTACAATGCATGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCATTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCAAGTAGACAGCCAACAAATTACTTTTGCAAGACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTTGAATGGAAGTTTAGGCATATTTTTCGAGGTCAGTCCCTTGATGTTCTGTCCATTTGA

Coding sequence (CDS)

ATGATCGGAAACCACCACTCATTAGTAACTTTCGCCAACTGCCACCAATTGTCAGTGATCGATACTGTTGATAACGATCACTTCGACAATGGTCAATGGTCACCGATTGAAACTGGAGAATCGTTGACTGGCGATTGGCATGGTTGGTATCATGATCGGAGATTGGCGATCGAGACTAGTGACAACGATCACTCCGACAATGTCAGTCCGATTGTGGTACCGGCTTACTCTAAAATTGTTTGTCAGTGGGGGTTTTTTTTGGGGTTTAATTCATCTCATCTTTCTCAGTTTCCCCACTTGATTGTTGTTCGCTTTCGTTGGTTTTTTTTGTTGTTTCTCTCTAGAGGGATCTACGGAGGAATCTTCTTAATGTTATCGGTTGAAAGTTATGAGTTTCAGGCAGGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTTGGTCAGCAGGATCACGAAGGAGGGGAAAAGAAATGCTTGAATTCAGAGCTATGGCATGCATGCGCGGGGCCCCTTGTGTCCCTCCCAACTGCTGGGACTCGGGTTGTCTACTTCCCTCAGGGTCACAGCGAACAGGTTGCTGCCACGACCAACAAAGAAGTTGATGGGCACATACCCAATTACCCGAACCTACCTCCCCAGTTGATATGCCAACTTCACAACGTTACAATGCATGCAGATGTGGAAACGGATGAAGTATATGCCCAGATGACATTACAGCCATTGACTGCACAAGAGCAAAAGGATACATTTCTACCCATGGAATTGGGGATTCCAAGTAGACAGCCAACAAATTACTTTTGCAAGACGTTGACAGCAAGTGATACAAGCACCCATGGAGGATTTTCTGTACCTCGTCGTGCTGCTGAGAAAGTTTTTCCTCCACTGGATTTTTCACAACAGCCACCAGCACAAGAGCTGATTGCAAGGGACCTTCATGATGTTGAATGGAAGTTTAGGCATATTTTTCGAGGTCAGTCCCTTGATGTTCTGTCCATTTGA

Protein sequence

MIGNHHSLVTFANCHQLSVIDTVDNDHFDNGQWSPIETGESLTGDWHGWYHDRRLAIETSDNDHSDNVSPIVVPAYSKIVCQWGFFLGFNSSHLSQFPHLIVVRFRWFFLLFLSRGIYGGIFLMLSVESYEFQAGGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQSLDVLSI

Homology

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BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot
Match: Q9FGV1 (Auxin response factor 8 OS=Arabidopsis thaliana OX=3702 GN=ARF8 PE=1 SV=2)

HSP 1 Score: 358.2 bits (918), Expect = 9.9e-98
Identity = 168/187 (89.84%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           MKLSTSG GQQ HEG  +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT +EQK+TF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 120

Query: 260 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 319
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 180

Query: 320 RHIFRGQ 327
           RHIFRGQ
Sbjct: 181 RHIFRGQ 185

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BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot
Match: Q9ZTX8 (Auxin response factor 6 OS=Arabidopsis thaliana OX=3702 GN=ARF6 PE=1 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 3.3e-93
Identity = 163/188 (86.70%), Postives = 174/188 (92.55%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHE-GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN 199
           M+LS++GF  Q HE  GEK+ LNSELWHACAGPLVSLP  G+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 200 KEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGI 259
           KEVD HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL AQEQKD +LP ELG+
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120

Query: 260 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 319
           PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180

Query: 320 FRHIFRGQ 327
           FRHIFRGQ
Sbjct: 181 FRHIFRGQ 188

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BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot
Match: Q258Y5 (Auxin response factor 12 OS=Oryza sativa subsp. indica OX=39946 GN=ARF12 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-89
Identity = 152/171 (88.89%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 156 EKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQL 215
           EKKCLNSELWHACAGPLV LPT GTRVVYFPQGHSEQVAA+TNKEV+GHIPNYPNLP QL
Sbjct: 24  EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 83

Query: 216 ICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASD 275
           ICQLH+VTMHADVETDEVYAQMTLQPL  QEQ D +LP E+GI S+QPTNYFCKTLTASD
Sbjct: 84  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 143

Query: 276 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           TSTHGGFSVPRRAAE+VFPPLDF+QQPPAQELIARD+HD+EWKFRHIFRGQ
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQ 194

[Close]

BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot
Match: Q0J951 (Auxin response factor 12 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF12 PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-89
Identity = 152/171 (88.89%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 156 EKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQL 215
           EKKCLNSELWHACAGPLV LPT GTRVVYFPQGHSEQVAA+TNKEV+GHIPNYPNLP QL
Sbjct: 24  EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 83

Query: 216 ICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASD 275
           ICQLH+VTMHADVETDEVYAQMTLQPL  QEQ D +LP E+GI S+QPTNYFCKTLTASD
Sbjct: 84  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 143

Query: 276 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           TSTHGGFSVPRRAAE+VFPPLDF+QQPPAQELIARD+HD+EWKFRHIFRGQ
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQ 194

[Close]

BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot
Match: Q2QM84 (Auxin response factor 25 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF25 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.1e-88
Identity = 153/172 (88.95%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 155 GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQ 214
           GE++CLNSELWHACAGPLVSLP   +RVVYFPQGHSEQVAA+TNKEVD  IPNYPNLPPQ
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 215 LICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTAS 274
           LICQLHNVTMHAD ETDEVYAQMTLQPL+ +EQK+ FLPMELG  S+QPTNYFCKTLTAS
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 139

Query: 275 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHD EWKFRHIFRGQ
Sbjct: 140 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 191

[Close]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL
Match: A0A6J1JQS1 (Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111486985 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.9e-108
Identity = 198/230 (86.09%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 124 MLSVESYEFQAG---------------------------GKLDMKLSTSGFGQQDHEGGE 183
           MLS+E YEF AG                            KLDMKLSTSGFGQQDHEGGE
Sbjct: 1   MLSIERYEFPAGFLSCPLGFYYSFLFLIFLCFETFFSDWVKLDMKLSTSGFGQQDHEGGE 60

Query: 184 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 243
           KKCLNSELWHACAGPLVSLPT+GTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI
Sbjct: 61  KKCLNSELWHACAGPLVSLPTSGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 120

Query: 244 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 303
           CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT
Sbjct: 121 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 180

Query: 304 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 230

[Close]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL
Match: A0A5D3C9K7 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00080 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.8e-108
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 136 GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA 195
           GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA
Sbjct: 40  GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA 99

Query: 196 TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME 255
           TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME
Sbjct: 100 TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME 159

Query: 256 LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDV 315
           LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+
Sbjct: 160 LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDI 219

Query: 316 EWKFRHIFRGQ 327
           EWKFRHIFRGQ
Sbjct: 220 EWKFRHIFRGQ 230

[Close]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL
Match: A0A6J1JNS1 (Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111486985 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.4e-108
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 124 MLSVESYEFQAGGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVV 183
           MLS+ES       KLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPT+GTRVV
Sbjct: 1   MLSIES----DWVKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTSGTRVV 60

Query: 184 YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 243
           YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT
Sbjct: 61  YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 120

Query: 244 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 303
           AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP
Sbjct: 121 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 180

Query: 304 AQELIARDLHDVEWKFRHIFRGQ 327
           AQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 AQELIARDLHDVEWKFRHIFRGQ 199

[Close]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL
Match: A0A6J1GZ34 (Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111458805 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.4e-108
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 124 MLSVESYEFQAGGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVV 183
           MLS+ES       KLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPT+GTRVV
Sbjct: 1   MLSIES----DWVKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTSGTRVV 60

Query: 184 YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 243
           YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT
Sbjct: 61  YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 120

Query: 244 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 303
           AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP
Sbjct: 121 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 180

Query: 304 AQELIARDLHDVEWKFRHIFRGQ 327
           AQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 AQELIARDLHDVEWKFRHIFRGQ 199

[Close]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL
Match: A0A6J1JZD5 (Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111489656 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 3.5e-106
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP
Sbjct: 61  EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 120

Query: 260 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 319
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 180

Query: 320 RHIFRGQ 327
           RHIFRGQ
Sbjct: 181 RHIFRGQ 187

[Close]

BLAST of Lsi09G008770 vs. NCBI nr
Match: XP_022989949.1 (auxin response factor 8-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 6.0e-108
Identity = 198/230 (86.09%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 124 MLSVESYEFQAG---------------------------GKLDMKLSTSGFGQQDHEGGE 183
           MLS+E YEF AG                            KLDMKLSTSGFGQQDHEGGE
Sbjct: 1   MLSIERYEFPAGFLSCPLGFYYSFLFLIFLCFETFFSDWVKLDMKLSTSGFGQQDHEGGE 60

Query: 184 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 243
           KKCLNSELWHACAGPLVSLPT+GTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI
Sbjct: 61  KKCLNSELWHACAGPLVSLPTSGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 120

Query: 244 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 303
           CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT
Sbjct: 121 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 180

Query: 304 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 230

[Close]

BLAST of Lsi09G008770 vs. NCBI nr
Match: XP_023531902.1 (auxin response factor 8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.7 bits (1031), Expect = 6.0e-108
Identity = 198/230 (86.09%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 124 MLSVESYEFQAG---------------------------GKLDMKLSTSGFGQQDHEGGE 183
           MLS+E YEF AG                            KLDMKLSTSGFGQQDHEGGE
Sbjct: 1   MLSIERYEFPAGFLSCPLGFYYSFLFLIFLCFETFFSDWVKLDMKLSTSGFGQQDHEGGE 60

Query: 184 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 243
           KKCLNSELWHACAGPLVSLPT+GTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI
Sbjct: 61  KKCLNSELWHACAGPLVSLPTSGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 120

Query: 244 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 303
           CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT
Sbjct: 121 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDT 180

Query: 304 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 327
           STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQ 230

[Close]

BLAST of Lsi09G008770 vs. NCBI nr
Match: TYK08647.1 (auxin response factor 8 [Cucumis melo var. makuwa])

HSP 1 Score: 401.4 bits (1030), Expect = 7.8e-108
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 136 GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA 195
           GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA
Sbjct: 40  GKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAA 99

Query: 196 TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME 255
           TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME
Sbjct: 100 TTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPME 159

Query: 256 LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDV 315
           LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA+DLHD+
Sbjct: 160 LGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDI 219

Query: 316 EWKFRHIFRGQ 327
           EWKFRHIFRGQ
Sbjct: 220 EWKFRHIFRGQ 230

[Close]

BLAST of Lsi09G008770 vs. NCBI nr
Match: XP_023531911.1 (auxin response factor 8-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-107
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 124 MLSVESYEFQAGGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVV 183
           MLS+ES       KLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPT+GTRVV
Sbjct: 1   MLSIES----DWVKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTSGTRVV 60

Query: 184 YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 243
           YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT
Sbjct: 61  YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 120

Query: 244 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 303
           AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP
Sbjct: 121 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 180

Query: 304 AQELIARDLHDVEWKFRHIFRGQ 327
           AQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 AQELIARDLHDVEWKFRHIFRGQ 199

[Close]

BLAST of Lsi09G008770 vs. NCBI nr
Match: XP_022957396.1 (auxin response factor 8-like [Cucurbita moschata])

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-107
Identity = 194/203 (95.57%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 124 MLSVESYEFQAGGKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVV 183
           MLS+ES       KLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPT+GTRVV
Sbjct: 1   MLSIES----DWVKLDMKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTSGTRVV 60

Query: 184 YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 243
           YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT
Sbjct: 61  YFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLT 120

Query: 244 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 303
           AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP
Sbjct: 121 AQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPP 180

Query: 304 AQELIARDLHDVEWKFRHIFRGQ 327
           AQELIARDLHDVEWKFRHIFRGQ
Sbjct: 181 AQELIARDLHDVEWKFRHIFRGQ 199

[Close]

BLAST of Lsi09G008770 vs. TAIR 10
Match: AT5G37020.1 (auxin response factor 8 )

HSP 1 Score: 358.2 bits (918), Expect = 7.0e-99
Identity = 168/187 (89.84%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           MKLSTSG GQQ HEG  +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT +EQK+TF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 120

Query: 260 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 319
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 180

Query: 320 RHIFRGQ 327
           RHIFRGQ
Sbjct: 181 RHIFRGQ 185

[Close]

BLAST of Lsi09G008770 vs. TAIR 10
Match: AT5G37020.2 (auxin response factor 8 )

HSP 1 Score: 358.2 bits (918), Expect = 7.0e-99
Identity = 168/187 (89.84%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           MKLSTSG GQQ HEG  +KCLNSELWHACAGPLVSLP++G+RVVYFPQGHSEQVAATTNK
Sbjct: 1   MKLSTSGLGQQGHEG--EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           EVDGHIPNYP+LPPQLICQLHNVTMHADVETDEVYAQMTLQPLT +EQK+TF+P+ELGIP
Sbjct: 61  EVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIP 120

Query: 260 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 319
           S+QP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHDVEWKF
Sbjct: 121 SKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKF 180

Query: 320 RHIFRGQ 327
           RHIFRGQ
Sbjct: 181 RHIFRGQ 185

[Close]

BLAST of Lsi09G008770 vs. TAIR 10
Match: AT1G30330.1 (auxin response factor 6 )

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-94
Identity = 163/187 (87.17%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           M+LS++GF  Q HE GEK+ LNSELWHACAGPLVSLP  G+RVVYFPQGHSEQVAA+TNK
Sbjct: 1   MRLSSAGFNPQPHE-GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           EVD HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL AQEQKD +LP ELG+P
Sbjct: 61  EVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVP 120

Query: 260 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 319
           SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWKF
Sbjct: 121 SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKF 180

Query: 320 RHIFRGQ 327
           RHIFRGQ
Sbjct: 181 RHIFRGQ 186

[Close]

BLAST of Lsi09G008770 vs. TAIR 10
Match: AT1G30330.2 (auxin response factor 6 )

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-94
Identity = 163/188 (86.70%), Postives = 174/188 (92.55%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHE-GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTN 199
           M+LS++GF  Q HE  GEK+ LNSELWHACAGPLVSLP  G+RVVYFPQGHSEQVAA+TN
Sbjct: 1   MRLSSAGFNPQPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTN 60

Query: 200 KEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGI 259
           KEVD HIPNYP+L PQLICQLHNVTMHADVETDEVYAQMTLQPL AQEQKD +LP ELG+
Sbjct: 61  KEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGV 120

Query: 260 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 319
           PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHD EWK
Sbjct: 121 PSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWK 180

Query: 320 FRHIFRGQ 327
           FRHIFRGQ
Sbjct: 181 FRHIFRGQ 188

[Close]

BLAST of Lsi09G008770 vs. TAIR 10
Match: AT1G19220.1 (auxin response factor 19 )

HSP 1 Score: 268.1 bits (684), Expect = 9.6e-72
Identity = 129/188 (68.62%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 140 MKLSTSGFGQQDHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNK 199
           MK  ++GF    +E GEKK +NS+LWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K
Sbjct: 1   MKAPSNGFLPSSNE-GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQK 60

Query: 200 EVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIP 259
           + D  IPNYPNLP +LIC LH+VT+HAD ETDEVYAQMTLQP+   + ++  L  ++G+ 
Sbjct: 61  QTD-FIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYD-REALLASDMGLK 120

Query: 260 -SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWK 319
            +RQPT +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQE++A+DLHD  W 
Sbjct: 121 LNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWT 180

Query: 320 FRHIFRGQ 327
           FRHI+RGQ
Sbjct: 181 FRHIYRGQ 185

The following BLAST results are available for this feature:

BLAST of Lsi09G008770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGV1	9.9e-98	89.84	Auxin response factor 8 OS=Arabidopsis thaliana OX=3702 GN=ARF8 PE=1 SV=2	[more]
Q9ZTX8	3.3e-93	86.70	Auxin response factor 6 OS=Arabidopsis thaliana OX=3702 GN=ARF6 PE=1 SV=2	[more]
Q258Y5	1.7e-89	88.89	Auxin response factor 12 OS=Oryza sativa subsp. indica OX=39946 GN=ARF12 PE=3 SV...	[more]
Q0J951	1.7e-89	88.89	Auxin response factor 12 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF12 PE=2 ...	[more]
Q2QM84	1.1e-88	88.95	Auxin response factor 25 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF25 PE=2 ...	[more]

BLAST of Lsi09G008770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQS1	2.9e-108	86.09	Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111486985 PE=3 SV=1	[more]
A0A5D3C9K7	3.8e-108	98.95	Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87...	[more]
A0A6J1JNS1	6.4e-108	95.57	Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111486985 PE=3 SV=1	[more]
A0A6J1GZ34	6.4e-108	95.57	Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111458805 PE=3 SV=1	[more]
A0A6J1JZD5	3.5e-106	100.00	Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111489656 PE=3 SV=1	[more]

BLAST of Lsi09G008770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989949.1	6.0e-108	86.09	auxin response factor 8-like isoform X1 [Cucurbita maxima]	[more]
XP_023531902.1	6.0e-108	86.09	auxin response factor 8-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
TYK08647.1	7.8e-108	98.95	auxin response factor 8 [Cucumis melo var. makuwa]	[more]
XP_023531911.1	1.3e-107	95.57	auxin response factor 8-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022957396.1	1.3e-107	95.57	auxin response factor 8-like [Cucurbita moschata]	[more]

BLAST of Lsi09G008770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37020.1	7.0e-99	89.84	auxin response factor 8	[more]
AT5G37020.2	7.0e-99	89.84	auxin response factor 8	[more]
AT1G30330.1	1.1e-94	87.17	auxin response factor 6	[more]
AT1G30330.2	2.3e-94	86.70	auxin response factor 6	[more]
AT1G19220.1	9.6e-72	68.62	auxin response factor 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 265..332 e-value: 1.3E-24 score: 88.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 251..326
None	No IPR available	PANTHER	PTHR31384:SF133	AUXIN RESPONSE FACTOR 8	coord: 140..327
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 140..327
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 266..327 e-value: 1.40802E-8 score: 49.6337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G008770.1	Lsi09G008770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding